BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004385
(757 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559474|ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
gi|223540142|gb|EEF41719.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
Length = 758
Score = 1464 bits (3791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/759 (91%), Positives = 731/759 (96%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F++EDVTVYFPYDNIYPEQYSYM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY
Sbjct: 1 MKFQIEDVTVYFPYDNIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LSKP++PVKLIYCTRTVHEMEKTLAELKLLHNYQ +HLGPAA+ILAIGLSSRKNLCVN R
Sbjct: 61 LSKPQSPVKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPAARILAIGLSSRKNLCVNPR 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLAAENRDSVDA CRK TASW+RA+AAENPNI TCEFFENYE+AASAAVLPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAGCRKLTASWMRAMAAENPNIPTCEFFENYERAASAAVLPPGVYTLQDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
R +GK++GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID
Sbjct: 181 RTYGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVR+QTLEGA+RNLSRINQEIERFKATDAGRLRAEYNRLVEGLA RGNL
Sbjct: 241 NVCIEALSVSVRKQTLEGASRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAQRGNLAV 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ WLSNPALP DILKEAVPGNIRRAEHFLHVLRRLVQYL+GRL+TENVEKE PVSFVAS
Sbjct: 301 TDTWLSNPALPDDILKEAVPGNIRRAEHFLHVLRRLVQYLKGRLDTENVEKESPVSFVAS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + AGIDQKTL+FCY+RLHSLMLTLEITDTDEFLH+QTICDFATLVGTY+RGFSIIIEP
Sbjct: 361 LNSQAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHVQTICDFATLVGTYSRGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FDERMPHIPDPVLQLSCHDASLA+KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS
Sbjct: 421 FDERMPHIPDPVLQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS+VPDGIVCFFV
Sbjct: 481 FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSVVPDGIVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD II +WN++GILKEIMQHKLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Sbjct: 541 SYSYMDGIINSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLVIMFG+PFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVIMFGIPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA+LNLSTDMALHIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDANLNLSTDMALHIAREF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDK G+ GRKTLLSQ DLEKM G + +MLY
Sbjct: 721 LRKMAQPYDKTGASGRKTLLSQEDLEKMAESG-MQDMLY 758
>gi|224062561|ref|XP_002300852.1| predicted protein [Populus trichocarpa]
gi|222842578|gb|EEE80125.1| predicted protein [Populus trichocarpa]
Length = 758
Score = 1444 bits (3739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/759 (90%), Positives = 720/759 (94%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F++EDVTVYFPYD+IYPEQYSYM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY
Sbjct: 1 MKFQIEDVTVYFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYT 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+SKP+ +KLIYCTRTVHEMEKTLAELKLLHNYQ +HLGPAAKILAIGLSSRKNLCVN
Sbjct: 61 ISKPQGAIKLIYCTRTVHEMEKTLAELKLLHNYQVKHLGPAAKILAIGLSSRKNLCVNPN 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VL A NRDSVDAACRKRTASWVRALAAENPN+ETCEFFENYE+AAS AVLPPGVYTLQDL
Sbjct: 121 VLEANNRDSVDAACRKRTASWVRALAAENPNVETCEFFENYERAASGAVLPPGVYTLQDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RA+GK++GWCPYFLARHMVQ ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID
Sbjct: 181 RAYGKEKGWCPYFLARHMVQLANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVRRQTL+GA+RN+SRI QEI RFKATDA RLR EY RLV GLAL GNLP
Sbjct: 241 NVCIEALSVSVRRQTLDGASRNISRIEQEINRFKATDANRLRDEYKRLVNGLALSGNLPG 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++WLSNPALP DIL+EAVPGNIRRAEHFLHVLRRL+QYL RL+TENVEKE P+SFVAS
Sbjct: 301 SDSWLSNPALPDDILREAVPGNIRRAEHFLHVLRRLLQYLTVRLDTENVEKESPISFVAS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I AGIDQKTL+FCY+RLHSLMLTLEITDTDEFLH+QTICDFATLVGTY+RGFSIIIEP
Sbjct: 361 INNQAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHVQTICDFATLVGTYSRGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FDERMPHIPDPVLQLSCHDASLA+KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS
Sbjct: 421 FDERMPHIPDPVLQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYGKLLVEMVSIVPDGIVCFFV
Sbjct: 481 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGIVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD II TWN+SG+LKEIMQHKLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Sbjct: 541 SYSYMDGIINTWNESGLLKEIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDK GS G+KTLLSQ DLEKM + G MLY
Sbjct: 721 LRKMAQPYDKTGSSGKKTLLSQEDLEKMDDSGK-QAMLY 758
>gi|225437002|ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
Length = 758
Score = 1441 bits (3731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/759 (90%), Positives = 723/759 (95%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F++EDVTVYFPYDNIYPEQYSYM+ELKRALDAKGH LLEMPTGTGKTIALLSLITSY
Sbjct: 1 MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYA 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LSKP NP+KL+YCTRTVHEMEKTLAEL+LLH YQ RHLGPAA+ILA+GLSSRKNLC+N
Sbjct: 61 LSKPSNPIKLLYCTRTVHEMEKTLAELRLLHQYQLRHLGPAARILALGLSSRKNLCINPA 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V++AENRDSVDA CRK TASWVRALA ENPNI TC+FFENYEKAAS AVLPPGVYTLQDL
Sbjct: 121 VVSAENRDSVDAGCRKLTASWVRALAVENPNIPTCQFFENYEKAASEAVLPPGVYTLQDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RAFG+ +GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ+ESVVVFDEAHNID
Sbjct: 181 RAFGRDKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVRRQTLEGATRNLS++ QEI RFKATDAGRLRAEYNRLVEGLA RGNLP
Sbjct: 241 NVCIEALSVSVRRQTLEGATRNLSKMAQEINRFKATDAGRLRAEYNRLVEGLAQRGNLPI 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ WL+NPALP DILKEAVPGNIRRAEHFL VLRRLVQYL GRLETENVEKEGPV+FVAS
Sbjct: 301 SDTWLANPALPDDILKEAVPGNIRRAEHFLSVLRRLVQYLHGRLETENVEKEGPVAFVAS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I + AGIDQK L+FCY+RLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP
Sbjct: 361 INSQAGIDQKMLKFCYDRLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FDERMPHIPDPVLQLSCHDASLA+KPVF+RFQSVVITSGTLSPIDLYPRLLNF+PVVSRS
Sbjct: 421 FDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F MSLTR+CICPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EMVS+VPDGIVCFFV
Sbjct: 481 FTMSLTRNCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMVSVVPDGIVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD I+ TWN+SGILKEIMQHKLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Sbjct: 541 SYSYMDGIVNTWNESGILKEIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDKAG GRKTLLS+ DLEKM DG+ NEML+
Sbjct: 721 LRKMAQPYDKAGVSGRKTLLSEEDLEKM-GDGTTNEMLF 758
>gi|356559661|ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
Length = 758
Score = 1424 bits (3685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/759 (88%), Positives = 719/759 (94%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F++ED+TVYFPYDNIYPEQYSYM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV
Sbjct: 1 MKFEIEDITVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LSKP +P+KL+YCTRTVHEMEKTLAEL+LLH+YQ RHLGPAAKILA+GLSSRKNLCVN R
Sbjct: 61 LSKPHSPLKLLYCTRTVHEMEKTLAELRLLHDYQLRHLGPAAKILALGLSSRKNLCVNPR 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLAAENRDSVDA CRK TASWVRA+AAENP + TCEFFE YE+A S+AVLPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVRAVAAENPGVPTCEFFEQYERAGSSAVLPPGVYTLQDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
R +GK++GWCPY+LARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID
Sbjct: 181 RVYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVRRQT+EGA RNL+R+ QEI++FKATDAGRLRAEYNRLVEGLALRG+LP
Sbjct: 241 NVCIEALSVSVRRQTIEGARRNLNRMRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPA 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+AWL+NPALP DILKEAVPGNIRRAEHF+HVLRRLVQYL GRL+TENVEKE PVSFV S
Sbjct: 301 TDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKESPVSFVVS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I HAGIDQK L+FCY+RLHSLM+TLEITDTDEFLHIQTICDFATLVGTY RGFSIIIEP
Sbjct: 361 ILNHAGIDQKALKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FDERMPHIPDPVLQL CHDASLA+KPVF+RFQSVVITSGTLSPIDLYPRLLNF+PVVSRS
Sbjct: 421 FDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F MSLTRDCICPMVLTRGSDQLPVSTKFDMRSD GV RNYG+LL+EM S+VPDGIVCFFV
Sbjct: 481 FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD I+ TWN++GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA+FFSVA
Sbjct: 541 SYSYMDGIVNTWNENGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP WILSHL DAHLNLSTDMALHIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLHDAHLNLSTDMALHIAREF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDK G GRKTLLSQ DLEKM G +++M+Y
Sbjct: 721 LRKMAQPYDKTGGTGRKTLLSQEDLEKMAVSG-LDDMMY 758
>gi|356499550|ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
Length = 758
Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/759 (88%), Positives = 719/759 (94%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ED+TVYFPYD IYPEQYSYM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV
Sbjct: 1 MKLEIEDITVYFPYDKIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LSKP +P+KL+YCTRTVHEMEKTLAEL+LLH+YQ RHLGPAAKILA+GLSSRKNLCVN R
Sbjct: 61 LSKPHSPLKLLYCTRTVHEMEKTLAELRLLHHYQLRHLGPAAKILALGLSSRKNLCVNPR 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLAAENRDSVDA CRK TASWVRA+AAENP++ +CEFFE YE+A S+AVLPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVRAVAAENPSVPSCEFFEQYERAGSSAVLPPGVYTLQDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RA+GK++GWCPY+LARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID
Sbjct: 181 RAYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVRRQT+EGA RNLSR+ QEI++FKATDAGRLRAEYNRLVEGLALRG+LP
Sbjct: 241 NVCIEALSVSVRRQTIEGARRNLSRMRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPA 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+AWL+NPALP DILKEAVPGNIRRAEHF+HVLRRLVQYL GRL+TENVEKE PVSFV S
Sbjct: 301 TDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKESPVSFVVS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I HAGIDQK+L+FCY+RLHSLM+TLEITDTDEFLHIQTICDFATLVGTY RGFSIIIEP
Sbjct: 361 ILNHAGIDQKSLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FDERMPHIPDPVLQL CHDASLA+KPVF+RFQSVVITSGTLSPIDLYPRLLNF+PVVSRS
Sbjct: 421 FDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F MSLTRDCICPMVLTRGSDQLPVSTKFDMRSD GV RNYG+LL+EM S+VPDGIVCFFV
Sbjct: 481 FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD I+ TWN++GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA+FFSVA
Sbjct: 541 SYSYMDGIVNTWNENGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP WILSHL DAHLNLSTDMALH+AR+F
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLHDAHLNLSTDMALHVARDF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDK G GRKTLLSQ DLEKM G + +++Y
Sbjct: 721 LRKMAQPYDKTGGTGRKTLLSQEDLEKMAVSG-MGDVMY 758
>gi|15218736|ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA repair helicase UVH6; AltName: Full=ERCC2
homolog; AltName: Full=RAD3 homolog; Short=AtUVH6;
Short=AtXPD; AltName: Full=UV hypersensitive protein 6;
AltName: Full=XPD homolog
gi|17064790|gb|AAL32549.1| Strong similarity to nucleotide excision repair protein
[Arabidopsis thaliana]
gi|20258776|gb|AAM13910.1| putative DNA repair protein [Arabidopsis thaliana]
gi|22651570|gb|AAM10793.1| DNA repair/transcription factor protein [Arabidopsis thaliana]
gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis thaliana]
gi|332189421|gb|AEE27542.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|332189422|gb|AEE27543.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
Length = 758
Score = 1413 bits (3657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/759 (87%), Positives = 718/759 (94%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIFK+EDVTVYFPYDNIYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY
Sbjct: 1 MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LS+P++P+KL+YCTRTVHEMEKTL ELKLLH+YQ RHLG AKILA+GLSSRKNLCVN++
Sbjct: 61 LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLAAENRDSVDAACRKRTASWVRAL+ ENPN+E C+FFENYEKAA A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RAFGK +GWCPYFLARHM+QFANV+VYSYQYLLDPKVAG ISKE+QKESVVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVRR TLEGA RNL++I QEI+RFKATDAGRLRAEYNRLVEGLALRG+L
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSG 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ WL+NPALP DILKEAVPGNIRRAEHF+HVLRRL+QYL RL+TENVEKE PVSFV+S
Sbjct: 301 GDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + AGI+QKTL+FCY+RL SLMLTLEITDTDEFL IQT+CDFATLVGTY RGFSIIIEP
Sbjct: 361 LNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+DERMPHIPDP+LQLSCHDASLA+KPVFDRFQSVVITSGTLSPIDLYPRLLNF PVVSRS
Sbjct: 421 YDERMPHIPDPILQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
FKMS+TRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYGKLLVEMVSIVPDG+VCFFV
Sbjct: 481 FKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD IIATWN++GILKEIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Sbjct: 541 SYSYMDGIIATWNETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLV+M+GVPFQYTLSKIL ARLEYL DTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDKAG++GRKTLL+Q DLEKM G + +M Y
Sbjct: 721 LRKMAQPYDKAGTMGRKTLLTQEDLEKMAETG-VQDMAY 758
>gi|6503086|gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D homolog [Arabidopsis
thaliana]
Length = 758
Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/759 (87%), Positives = 718/759 (94%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIFK+EDVTVYFPYDNIYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY
Sbjct: 1 MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LS+P++P+KL+YCTRTVHEMEKTL ELKLLH+YQ RHLG AKILA+GLSSRKNLCVN++
Sbjct: 61 LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLAAENRDSVDAACRKRTASWVRAL+ ENPN+E C+FFENYEKAA A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RAFGK +GWCPYFLARHM+QFANV+VYSYQYLLDPKVAG ISKE+QKESVVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVRR TLEGA RNL++I QEI+RFKATDAGRLRAEYNRLVEGLALRG+L
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSG 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ WL+NPALP DILKEAVPGNIRRAEHF+HVLRRL+QYL RL+TENVEKE PVSFV+S
Sbjct: 301 GDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + AGI+QKTL+FCY+RL SLMLTLEITDTDEFL IQT+CDFATLVGTY RGFSIIIEP
Sbjct: 361 LNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+DERMPHIPDP+LQLSCHDASLA+KPVFDRFQSVVITSGTLSPIDLYPRLLNF PVVSRS
Sbjct: 421 YDERMPHIPDPILQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
FKMS+TRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYGKLLVEMVSIVPDG+VCFFV
Sbjct: 481 FKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD IIATWN++GIL+EIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Sbjct: 541 SYSYMDGIIATWNETGILEEIMQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLV+M+GVPFQYTLSKIL ARLEYL DTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDKAG++GRKTLL+Q DLEKM G + +M Y
Sbjct: 721 LRKMAQPYDKAGTMGRKTLLTQEDLEKMAETG-VQDMAY 758
>gi|297843126|ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
lyrata]
gi|297335286|gb|EFH65703.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
lyrata]
Length = 758
Score = 1410 bits (3650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/759 (87%), Positives = 718/759 (94%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIFK+EDVTVYFPYDNIYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY
Sbjct: 1 MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LS+P++P+KL+YCTRTVHEMEKTL ELKLLH+YQ RHLG A ILAIGLSSRKNLCVN++
Sbjct: 61 LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGAQAMILAIGLSSRKNLCVNTK 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLAAENRDSVDAACRKRTASWVRAL+ ENPN+E C++FENYEKAA A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDYFENYEKAADNALLPPGVYTLEDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RAFGK +GWCPYFLARHMVQFANV+VYSYQYLLDPKVAGIISKE+QKESVVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMVQFANVIVYSYQYLLDPKVAGIISKELQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIEALSVSVRR TLEGA RNL++I QEI+RFKATDAGRLRAEYNRLVEGLALRG+L
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSG 300
Query: 301 A--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ WL+NPALP DILKEAVPGNIRRAEHF+HVLRRL+QYL RL+TENVEKE PVSFV+S
Sbjct: 301 SDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + AGI+QKTL+FCY+RL SLMLTLEITDTDEFL IQT+CDFATLVGTY RGFSIIIEP
Sbjct: 361 LNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+DERMPHIPDP+LQLSCHDASLA+KPVFDRFQSVVITSGTLSPIDLYPRLL+F PVVSRS
Sbjct: 421 YDERMPHIPDPILQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLSFTPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
FKMS+TRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYGKLLVEMVSIVPDG+VCFFV
Sbjct: 481 FKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD IIATWN++GILKEIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Sbjct: 541 SYSYMDGIIATWNETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLV+M+GVPFQYTLSKIL ARLEYL DTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LRKMAQPYDKAG++GRKTLL+Q DLEKM G + +M Y
Sbjct: 721 LRKMAQPYDKAGTMGRKTLLTQEDLEKMAETG-VQDMAY 758
>gi|449462346|ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
[Cucumis sativus]
Length = 919
Score = 1391 bits (3600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/758 (87%), Positives = 713/758 (94%), Gaps = 3/758 (0%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
+FK+ ++T F +D I+P++Y Y++++ +ALDAKGHCLLEMPTGTGKTIALLSLITSY L
Sbjct: 163 MFKIXNITKLFXFDIIFPQRYHYLIQINKALDAKGHCLLEMPTGTGKTIALLSLITSYAL 222
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
SKP+NPVKLIYCTRTVHEMEKTLAEL+LLH+YQ + LGP A+ILA+GLSSRKNLCVN V
Sbjct: 223 SKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPNV 282
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLR 181
LA+E+RDSVDA CRK TASWVRA+AAENP++ TCEFFE YEKA S+AVLPPGVYTLQDLR
Sbjct: 283 LASESRDSVDAGCRKLTASWVRAMAAENPDVPTCEFFEQYEKAGSSAVLPPGVYTLQDLR 342
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
AFG ++GWCPYFLARHMVQFANVVVYSYQYLLDPKVA IISKEMQ+ESVVVFDEAHNIDN
Sbjct: 343 AFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDN 402
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP-- 299
VCIEALSVSVRRQT+EGA RNL+++ QEIERFK TDAGRLRAEYNRLVEGLA RGNLP
Sbjct: 403 VCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPIS 462
Query: 300 NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI 359
+ WLSNPALP DILKEAVPGNIRRAEHF+HVLRRLVQYL GRL+TENVEKEG V+FV SI
Sbjct: 463 DTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSI 522
Query: 360 TAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPF 419
+ AGIDQKTL+FCY+RLHSLMLTLEITDTDEFLH+QTICDFATLVGTY RGFSIIIEP
Sbjct: 523 GSQAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHVQTICDFATLVGTYARGFSIIIEPV 582
Query: 420 DERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSF 479
DERMPHIPDPVLQLSCHDASLA+KPVF+RFQSVVITSGTLSPIDLYPRLLNF+PVVSRSF
Sbjct: 583 DERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSF 642
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
MSLTRDCICPMVLTRGSDQLPVSTKFDMRSD GV RNYG+LL+EMVS VPDGIVCFFVS
Sbjct: 643 TMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVS 702
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR 599
YSYMD II +WN++GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR
Sbjct: 703 YSYMDGIINSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR 762
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAA 659
GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR+TFQIKEGDFLTFDALRQAA
Sbjct: 763 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQIKEGDFLTFDALRQAA 822
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 719
QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL
Sbjct: 823 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 882
Query: 720 RKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
RKMAQPYDKAGS GRKTLLSQ DLEKM+ + ++NEMLY
Sbjct: 883 RKMAQPYDKAGSSGRKTLLSQEDLEKMS-EANMNEMLY 919
>gi|3850576|gb|AAC72116.1| Strong similarity to gb|U04968 nucleotide excision repair protein
(ERCC2) from Cricetulus grisseus [Arabidopsis thaliana]
Length = 735
Score = 1346 bits (3484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/732 (87%), Positives = 684/732 (93%), Gaps = 15/732 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIFK+EDVTVYFPYDNIYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY
Sbjct: 1 MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LS+P++P+KL+YCTRTVHEMEKTL ELKLLH+YQ RHLG AKILA+GLSSRKNLCVN++
Sbjct: 61 LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLAAENRDSVDAACRKRTASWVRAL+ ENPN+E C+FFENYEKAA A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RAFGK +GWCPYFLARHM+QFANV+VYSYQYLLDPKVAG ISKE+QKESVVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIE-------------RFKATDAGRLRAEYNR 287
NVCIEALSVSVRR TLEGA RNL++I QEI+ RFKATDAGRLRAEYNR
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDSSYYIIEIVQLVGRFKATDAGRLRAEYNR 300
Query: 288 LVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETE 345
LVEGLALRG+L WL+NPALP DILKEAVPGNIRRAEHF+HVLRRL+QYL RL+TE
Sbjct: 301 LVEGLALRGDLSGGDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGVRLDTE 360
Query: 346 NVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLV 405
NVEKE PVSFV+S+ + AGI+QKTL+FCY+RL SLMLTLEITDTDEFL IQT+CDFATLV
Sbjct: 361 NVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDEFLPIQTVCDFATLV 420
Query: 406 GTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
GTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASLA+KPVFDRFQSVVITSGTLSPIDLY
Sbjct: 421 GTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLY 480
Query: 466 PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
PRLLNF PVVSRSFKMS+TRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYGKLLVEM
Sbjct: 481 PRLLNFTPVVSRSFKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEM 540
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA 585
VSIVPDG+VCFFVSYSYMD IIATWN++GILKEIMQ KLVFIETQDVVETTLALDNYR+A
Sbjct: 541 VSIVPDGVVCFFVSYSYMDGIIATWNETGILKEIMQQKLVFIETQDVVETTLALDNYRRA 600
Query: 586 CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK 645
CDCGRGAVFFSVARGKVAEGIDFDRHYGRLV+M+GVPFQYTLSKIL ARLEYL DTFQIK
Sbjct: 601 CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIK 660
Query: 646 EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLN 705
EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLN
Sbjct: 661 EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLN 720
Query: 706 LSTDMALHIARE 717
LSTDMA+HIARE
Sbjct: 721 LSTDMAIHIARE 732
>gi|115462055|ref|NP_001054627.1| Os05g0144800 [Oryza sativa Japonica Group]
gi|51038192|gb|AAT93995.1| putative nucleotide excision repair protein XP-D [Oryza sativa
Japonica Group]
gi|113578178|dbj|BAF16541.1| Os05g0144800 [Oryza sativa Japonica Group]
gi|222630172|gb|EEE62304.1| hypothetical protein OsJ_17093 [Oryza sativa Japonica Group]
Length = 758
Score = 1266 bits (3275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/759 (80%), Positives = 677/759 (89%), Gaps = 13/759 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F LE +TV+FPY IYPEQ++YM ELKRALDA+GH LLEMPTGTGKT AL+SLITSY
Sbjct: 1 MKFDLEGLTVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTSALISLITSYS 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK--ILAIGLSSRKNLCVN 118
L+ P P++LIYCTRTVHEMEKTLAEL+LL HL AA +LA+GLSSRKNLCV+
Sbjct: 61 LASPSRPLRLIYCTRTVHEMEKTLAELRLLFA----HLPAAASRSLLALGLSSRKNLCVH 116
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPN-IETCEFFENYEKAASA----AVLPPG 173
+ AA RDSVD ACR+ TASWVR AA +P+ C+FFE++++AA+A + +PPG
Sbjct: 117 PQASAAAARDSVDTACRRLTASWVRDRAASDPDSTPLCDFFESFDRAAAAGDLASYMPPG 176
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
VYTL DLRA G+ +G CPYFLAR MV++ANVVVYSYQYL+DPKVA I+S+EMQKE VVVF
Sbjct: 177 VYTLADLRALGRDRGICPYFLARQMVKYANVVVYSYQYLIDPKVASIVSREMQKECVVVF 236
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIEALSVS+R+QTLEGA RNL RI+QEI+RFKATDA RLRAEYNRLV+GLA
Sbjct: 237 DEAHNIDNVCIEALSVSIRKQTLEGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLA 296
Query: 294 LRGNLP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
RGNLP +AWL+NPALP DILKEAVPGNIRRAEHFL VLRRLV++L GRLETENVE E
Sbjct: 297 QRGNLPISDAWLANPALPEDILKEAVPGNIRRAEHFLAVLRRLVRFLDGRLETENVENEM 356
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
PV+FVASI + AGIDQK LRFCY+RLHSLMLTLEITDTDEF+HIQTICDFATL+GTYTRG
Sbjct: 357 PVAFVASIHSQAGIDQKMLRFCYDRLHSLMLTLEITDTDEFMHIQTICDFATLIGTYTRG 416
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
FSIIIEP+DERMP I DPV+QLSCHDASLA++PVF+RFQ+VVITSGTLSPIDLYPRLLNF
Sbjct: 417 FSIIIEPYDERMPDIRDPVIQLSCHDASLAIQPVFERFQTVVITSGTLSPIDLYPRLLNF 476
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
+PV+SRSF MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EM S VPD
Sbjct: 477 NPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPD 536
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIVCFFVSYSYMD I+ +WN+ GIL++IMQHKLVFIET DVVETTLALDNYRKACDCGRG
Sbjct: 537 GIVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRG 596
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
A+FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+ILLARLEYLR+TFQIKEGDFLT
Sbjct: 597 AIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLT 656
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL DAHLNLSTDMA
Sbjct: 657 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMA 716
Query: 712 LHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDG 750
LHIAREFLR+MAQPYDK GS G KTLL++ DL+ M D
Sbjct: 717 LHIAREFLRRMAQPYDKTGSGGNKTLLTEEDLQNMAQDA 755
>gi|226496439|ref|NP_001152321.1| DNA repair helicase UVH6 [Zea mays]
gi|195655087|gb|ACG47011.1| DNA repair helicase UVH6 [Zea mays]
gi|413917667|gb|AFW57599.1| DNA repair helicase UVH6 [Zea mays]
Length = 758
Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/759 (79%), Positives = 679/759 (89%), Gaps = 13/759 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L+ + V+FPY IYPEQ++YM ELKRALDA+GH LLEMPTGTGKT AL+SLITSY
Sbjct: 1 MRFDLDGLPVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYS 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK--ILAIGLSSRKNLCVN 118
L+ P P++LIYCTRTVHEMEKTLAEL+LL HL PAA +LA+GLSSRKNLC++
Sbjct: 61 LANPARPLRLIYCTRTVHEMEKTLAELRLLFA----HLPPAASRSLLALGLSSRKNLCIH 116
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPN-IETCEFFENYEKAASA----AVLPPG 173
+ AA RDSVD ACR+ TASWVR A+ +P+ CEF+E +++AA+A + +PPG
Sbjct: 117 PQASAAAARDSVDTACRRLTASWVREKASSDPDSTPLCEFYETFDRAAAAGDLASFMPPG 176
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
VYTL DLRA G+++ CPYFLAR MV++ANVVVYSYQYLLDPKVA I+S+EMQKE VVVF
Sbjct: 177 VYTLADLRALGRERRVCPYFLARQMVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVF 236
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIEALSVS+R+QTLEGA RNL RI+QEI+RFKATDA RLRAEYNRLV+GLA
Sbjct: 237 DEAHNIDNVCIEALSVSIRKQTLEGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLA 296
Query: 294 LRGNLP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
RGNLP +AWL+NP+LP DILKEAVPGNIRRAEHFL VLRRLV++L GRLETENVE E
Sbjct: 297 QRGNLPISDAWLANPSLPDDILKEAVPGNIRRAEHFLAVLRRLVRFLDGRLETENVENEM 356
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
PVSFVASI + AGIDQK LRFCY+RLHSLM+TLEITDTDEF+HIQTICDFATL+GTYTRG
Sbjct: 357 PVSFVASIHSQAGIDQKMLRFCYDRLHSLMMTLEITDTDEFMHIQTICDFATLIGTYTRG 416
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
FSIIIEP+D+RMP I DPV+QLSCHDASLA++PVFDRF++VVITSGTLSPIDLYPRLLNF
Sbjct: 417 FSIIIEPYDDRMPDIRDPVIQLSCHDASLAIRPVFDRFETVVITSGTLSPIDLYPRLLNF 476
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
+PV+SRSF MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EM S VPD
Sbjct: 477 NPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPD 536
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIVCFFVSYSYMD I+ +W++ GIL++IMQHKLVFIET DVVETTLALDNYRKACDCGRG
Sbjct: 537 GIVCFFVSYSYMDGIVNSWHEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRG 596
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
A+FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+ILLARLEYLR+TFQIKEGDFLT
Sbjct: 597 AIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLT 656
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL DAHLNLSTDMA
Sbjct: 657 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMA 716
Query: 712 LHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDG 750
LHIAREFLR+MAQPYDKAGS G+KTLL++ DLE + DG
Sbjct: 717 LHIAREFLRRMAQPYDKAGSGGKKTLLTEEDLENLAQDG 755
>gi|242089495|ref|XP_002440580.1| hypothetical protein SORBIDRAFT_09g003450 [Sorghum bicolor]
gi|241945865|gb|EES19010.1| hypothetical protein SORBIDRAFT_09g003450 [Sorghum bicolor]
Length = 758
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/759 (79%), Positives = 677/759 (89%), Gaps = 13/759 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L+ + V+FPY IYPEQ++YM ELKRALDA+GH LLEMPTGTGKT AL+SLITSY
Sbjct: 1 MRFDLDGLPVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYS 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA--KILAIGLSSRKNLCVN 118
L+ P P++LIYCTRTVHEMEKTLAEL+LL HL P A +LA+GLSSRKNLCV+
Sbjct: 61 LANPSRPLRLIYCTRTVHEMEKTLAELRLLFA----HLPPPAARSLLALGLSSRKNLCVH 116
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASA----AVLPPG 173
+ AA RDSVD ACR+ TASWVR AA +P + CEF+E +++AA+A + +PPG
Sbjct: 117 PQASAAAARDSVDTACRRLTASWVREKAASDPESTPLCEFYETFDRAAAAGDLASFMPPG 176
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
VYTL DLRA G+++ CPYFLAR MV++ANVVVYSYQYLLDPKVA I+S+EMQKE VVVF
Sbjct: 177 VYTLADLRALGRERRVCPYFLARQMVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVF 236
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIEALSVS+R+QTLEGA RNL RI+QEI+RFKATDA RLRAEYNRLV+GLA
Sbjct: 237 DEAHNIDNVCIEALSVSIRKQTLEGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLA 296
Query: 294 LRGNLP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
RGNLP +AWL+NPALP DILKEAVPGNIRRAEHFL VLRRLV++L GRLETENVE E
Sbjct: 297 QRGNLPISDAWLANPALPDDILKEAVPGNIRRAEHFLAVLRRLVRFLDGRLETENVENEM 356
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
PVSFVASI + AGIDQK LRFCY+RLHSLM+TLEITDTDEF+HIQTICDFATL+GTYTRG
Sbjct: 357 PVSFVASIHSQAGIDQKMLRFCYDRLHSLMMTLEITDTDEFMHIQTICDFATLIGTYTRG 416
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
FSIIIEP+DERMP I DPV+QLSCHDASLA++PVFDRF++VVITSGTLSPIDLYPRLLNF
Sbjct: 417 FSIIIEPYDERMPDIRDPVIQLSCHDASLAIRPVFDRFETVVITSGTLSPIDLYPRLLNF 476
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
+PV+SRSF MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EM S VPD
Sbjct: 477 NPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPD 536
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIVCFFVSYSYMD I+ +W++ GIL++IMQHKLVFIET DVVETTLALDNYRKACDCGRG
Sbjct: 537 GIVCFFVSYSYMDGIVNSWHEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRG 596
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
A+FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+ILLARLEYLR+TFQIKEGDFLT
Sbjct: 597 AIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLT 656
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL DAHLNLSTDMA
Sbjct: 657 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMA 716
Query: 712 LHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDG 750
LHIAREFLR+MAQPYDK GS G+KTLL++ DL+ M DG
Sbjct: 717 LHIAREFLRRMAQPYDKTGSGGKKTLLTEEDLQNMAQDG 755
>gi|168039045|ref|XP_001772009.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676610|gb|EDQ63090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 750
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/748 (78%), Positives = 674/748 (90%), Gaps = 3/748 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M FK+E +TVYFPY+ IYPEQY YM++LKR LDA+GHCLLEMPTGTGKTI LLSLITSY+
Sbjct: 1 MKFKIEGLTVYFPYEFIYPEQYDYMVDLKRTLDARGHCLLEMPTGTGKTITLLSLITSYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L+ P + KLIYCTRTVHEMEK L EL+ L YQ + LG AAK+LA+GLSSRKNLC++ +
Sbjct: 61 LANP-SVGKLIYCTRTVHEMEKVLEELRKLQAYQEKALGKAAKMLALGLSSRKNLCIHPQ 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +R+SVDA CRK TASWVR+LA +NPNIE C ++E YEK + A+LP GVYTL DL
Sbjct: 120 VSGEGSRESVDAGCRKLTASWVRSLALDNPNIELCPYYEGYEKGGADALLPSGVYTLHDL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
R FG+++ WCPYFLARHM+QFANVVVY+YQYLLDPKVAGIISKEM+KE VVVFDEAHNID
Sbjct: 180 RGFGREKRWCPYFLARHMIQFANVVVYNYQYLLDPKVAGIISKEMEKECVVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSV++R+QTL+GATRNLS++ Q IE+ KATDA RLR EY+RLVEGLA RGNL
Sbjct: 240 NVCIEALSVNIRQQTLDGATRNLSQVTQLIEKSKATDANRLRQEYSRLVEGLAQRGNLAG 299
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ WL+NPALP DIL+EAVPGNIRRAEHF+ L+RLVQY++ R+ TE VE E PVSFV +
Sbjct: 300 TDTWLANPALPQDILQEAVPGNIRRAEHFVAFLKRLVQYIKNRMITEKVESESPVSFVTA 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ AGIDQK+L+FCY+RLHSL+LTLE+T+TDEF++IQT+CDFATLVGTYTRGF+IIIEP
Sbjct: 360 LQNQAGIDQKSLKFCYDRLHSLLLTLEVTNTDEFMYIQTVCDFATLVGTYTRGFTIIIEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+DERMP+IPDPVLQLSC D+SLA+KPVF++FQSVVITSGTLSPIDLYPRLLNFHPV+S S
Sbjct: 420 YDERMPNIPDPVLQLSCLDSSLAIKPVFEKFQSVVITSGTLSPIDLYPRLLNFHPVISNS 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+KM+LTRDC+CPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EMV+ VPDGIVCFFV
Sbjct: 480 YKMTLTRDCLCPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMVTAVPDGIVCFFV 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYMD I+ +WN+ GIL+E+MQHKLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Sbjct: 540 SYSYMDGIVNSWNEMGILQEVMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEGIDFDRHYGRLVIM+GVPFQYTLS+IL ARLEYLR+TFQIKE DFLTFDA+RQA
Sbjct: 600 RGKVAEGIDFDRHYGRLVIMYGVPFQYTLSRILRARLEYLRETFQIKENDFLTFDAVRQA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIRSKADYGMMIFADKRY+RHDKRSKLPGWILSHLR+AHLNLSTDM++HIAREF
Sbjct: 660 AQCVGRVIRSKADYGMMIFADKRYNRHDKRSKLPGWILSHLREAHLNLSTDMSVHIAREF 719
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKM 746
LR+MAQPYDK G TLLSQADLEKM
Sbjct: 720 LRRMAQPYDKTGKGLNATLLSQADLEKM 747
>gi|357134709|ref|XP_003568958.1| PREDICTED: DNA repair helicase UVH6-like [Brachypodium distachyon]
Length = 758
Score = 1253 bits (3243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/759 (79%), Positives = 676/759 (89%), Gaps = 13/759 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F LE +TV+FPY IYPEQ++YM +LKRALDA+GH LLEMPTGTGKT AL+SLITSY
Sbjct: 1 MKFDLEGLTVHFPYAAIYPEQHAYMGDLKRALDARGHALLEMPTGTGKTAALISLITSYS 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA--KILAIGLSSRKNLCVN 118
L+ P P++L+YCTRTVHEMEKTLAEL+LL + HL PAA +LA+GLSSRKNLCV+
Sbjct: 61 LTNPSRPLRLLYCTRTVHEMEKTLAELRLLFS----HLPPAAARSLLALGLSSRKNLCVH 116
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPN-IETCEFFENYEKAASA----AVLPPG 173
+ A+ RDSVD ACR+ TASWVR AA +P+ C+FFE++++AA+A + +PPG
Sbjct: 117 PQASASAARDSVDTACRRLTASWVRDKAASDPDSTPLCDFFESFDRAAAAGDLASYMPPG 176
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
VYTL DLR+ G+++ CPY+LAR MV++ANVVVYSYQYLLDPKVA I+S+EMQKE VVVF
Sbjct: 177 VYTLADLRSLGRERRICPYYLARQMVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVF 236
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIEALSVS+R+QTLEGA RNL RI+QEI+RFKATDA RLRAEYNRLV+GLA
Sbjct: 237 DEAHNIDNVCIEALSVSIRKQTLEGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLA 296
Query: 294 LRGNLP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
RGNLP +AWL+NP+LP DILKEAVPGNIRRAEHFL VL+RLV++L GRLETENVE E
Sbjct: 297 QRGNLPISDAWLANPSLPDDILKEAVPGNIRRAEHFLAVLKRLVRFLDGRLETENVENEM 356
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
PVSFVASI + AGIDQ+ LRFCY+RL SL+LTLEITDTDEF+HIQTICDFATL+GTYTRG
Sbjct: 357 PVSFVASIHSQAGIDQRMLRFCYDRLQSLLLTLEITDTDEFMHIQTICDFATLIGTYTRG 416
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
FSIIIEP+D+RMP I DPV+QLSCHDASLA++PVFDRFQ+VVITSGTLSPIDLYPRLLNF
Sbjct: 417 FSIIIEPYDDRMPEIRDPVIQLSCHDASLAIQPVFDRFQTVVITSGTLSPIDLYPRLLNF 476
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
+PV+SRSF MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EM S VPD
Sbjct: 477 NPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPD 536
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIVCFFVSYSYMD I+ WN+ GIL++IMQHKLVFIET DVVETTLALDNYRKACDCGRG
Sbjct: 537 GIVCFFVSYSYMDGIVNNWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRG 596
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL ARLEYLR+TFQIKEGDFLT
Sbjct: 597 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILRARLEYLRETFQIKEGDFLT 656
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL DAHLNLSTDMA
Sbjct: 657 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMA 716
Query: 712 LHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDG 750
LH AREFLR+MAQPYDK GS G+KTLL++ DL+ M D
Sbjct: 717 LHTAREFLRRMAQPYDKTGSGGKKTLLTEEDLQDMARDA 755
>gi|326508038|dbj|BAJ86762.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 758
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/755 (79%), Positives = 674/755 (89%), Gaps = 13/755 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F LE +TV+FPY IYPEQ++YM ELKRALDA+GH LLEMPTGTGKT AL+SLITSY
Sbjct: 1 MKFDLEGLTVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYS 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK--ILAIGLSSRKNLCVN 118
L+ P P++LIYCTRTVHEMEKTLAEL+LL + HL P A +LA+GLSSRKNLCV+
Sbjct: 61 LANPSRPLRLIYCTRTVHEMEKTLAELRLLFS----HLPPEASRSLLALGLSSRKNLCVH 116
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASA----AVLPPG 173
+ A+ RDSVD ACR+ TASWVR AA +P + CEFFE++++AA+A + +PPG
Sbjct: 117 PQASASAARDSVDTACRRLTASWVRDKAASDPESTPLCEFFESFDRAAAAGDLSSFMPPG 176
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
VYTL DLR+ G+++ CPYFLAR MV++ANVVVYSYQYLLDPKVA I+S+EMQKE VVVF
Sbjct: 177 VYTLADLRSLGRERRICPYFLARQMVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVF 236
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIEALSVSVR+QTL+GA RNL RI+QEI+RFKATDA RLRAEYNRLV+GLA
Sbjct: 237 DEAHNIDNVCIEALSVSVRKQTLDGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLA 296
Query: 294 LRGNLP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
RGNLP +AWL+NP+LP DILKEAVPGNIR+AEHFL VL+RLV++L GRLETENVE E
Sbjct: 297 QRGNLPISDAWLANPSLPDDILKEAVPGNIRKAEHFLAVLKRLVKFLDGRLETENVENEM 356
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
PVSFVASI + AGIDQ+ LRFCY+RLHSL+LTLEITDTDEF+HIQTICDFATL+GTY+RG
Sbjct: 357 PVSFVASIHSQAGIDQRMLRFCYDRLHSLLLTLEITDTDEFMHIQTICDFATLIGTYSRG 416
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
FSIIIEP+D+RMP I DPV+QLSCHDASLA++PVF+RFQ+VVITSGTLSPI LYPRLLNF
Sbjct: 417 FSIIIEPYDDRMPEIRDPVIQLSCHDASLAIQPVFERFQTVVITSGTLSPITLYPRLLNF 476
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
PV+SRSF MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EM S VPD
Sbjct: 477 QPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASSVPD 536
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIVCFFVSYSYMD I+ +WN+ GIL++IMQHKLVFIET DVVETTLALDNYRKACDCGRG
Sbjct: 537 GIVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRG 596
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL ARLEYLR+TFQIKEGDFLT
Sbjct: 597 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILRARLEYLRETFQIKEGDFLT 656
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL +AHLNLSTDMA
Sbjct: 657 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHEAHLNLSTDMA 716
Query: 712 LHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
LH AREFLR+MAQPYDKAGS G KTLL++ DL+ M
Sbjct: 717 LHTAREFLRRMAQPYDKAGSGGAKTLLTEEDLQDM 751
>gi|125550818|gb|EAY96527.1| hypothetical protein OsI_18432 [Oryza sativa Indica Group]
Length = 734
Score = 1234 bits (3192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/735 (80%), Positives = 658/735 (89%), Gaps = 13/735 (1%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELKRALDA+GH LLEMPTGTGKT AL+SLITSY L+ P P++LIYCTRTVHEMEKTL
Sbjct: 1 MGELKRALDARGHALLEMPTGTGKTAALISLITSYSLASPSRPLRLIYCTRTVHEMEKTL 60
Query: 85 AELKLLHNYQTRHLGPAAK--ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWV 142
AEL+LL HL AA +LA+GLSSRKNLCV+ + AA RDSVD ACR+ TASWV
Sbjct: 61 AELRLLFA----HLPAAASRSLLALGLSSRKNLCVHPQASAAAARDSVDTACRRLTASWV 116
Query: 143 RALAAENPN-IETCEFFENYEKAASA----AVLPPGVYTLQDLRAFGKQQGWCPYFLARH 197
R AA +P+ C+FFE++++AA+A + +PPGVYTL DLRA G+ +G CPYFLAR
Sbjct: 117 RDRAASDPDSTPLCDFFESFDRAAAAGDLASYMPPGVYTLADLRALGRDRGICPYFLARQ 176
Query: 198 MVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLE 257
MV++ANVVVYSYQYL+DPKVA I+S+EMQKE VVVFDEAHNIDNVCIEALSVS+R+QTLE
Sbjct: 177 MVKYANVVVYSYQYLIDPKVASIVSREMQKECVVVFDEAHNIDNVCIEALSVSIRKQTLE 236
Query: 258 GATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP--NAWLSNPALPSDILKE 315
GA RNL RI+QEI+RFKATDA RLRAEYNRLV+GLA RGNLP +AWL+NPALP DILKE
Sbjct: 237 GAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLAQRGNLPISDAWLANPALPEDILKE 296
Query: 316 AVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYE 375
AVPGNIRRAEHFL VLRRLV++L GRLETENVE E PV+FVASI + AGIDQK LRFCY+
Sbjct: 297 AVPGNIRRAEHFLAVLRRLVRFLDGRLETENVENEMPVAFVASIHSQAGIDQKMLRFCYD 356
Query: 376 RLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSC 435
RLHSLMLTLEITDTDEF+HIQTICDFATL+GTYTRGFSIIIEP+DERMP I DPV+QLSC
Sbjct: 357 RLHSLMLTLEITDTDEFMHIQTICDFATLIGTYTRGFSIIIEPYDERMPDIRDPVIQLSC 416
Query: 436 HDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTR 495
HDASLA++PVF+RFQ+VVITSGTLSPIDLYPRLLNF+PV+SRSF MSLTRDCICPMVLTR
Sbjct: 417 HDASLAIQPVFERFQTVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTR 476
Query: 496 GSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI 555
GSDQLPVSTKFDMRSDPGV RNYG+LL+EM S VPDGIVCFFVSYSYMD I+ +WN+ GI
Sbjct: 477 GSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPDGIVCFFVSYSYMDGIVNSWNEMGI 536
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRL 615
L++IMQHKLVFIET DVVETTLALDNYRKACDCGRGA+FFSVARGKVAEGIDFDRHYGRL
Sbjct: 537 LQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRL 596
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMM 675
VIMFGVPFQYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMM
Sbjct: 597 VIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMM 656
Query: 676 IFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRK 735
IFADKRYSRHDKRSKLPGWILSHL DAHLNLSTDMALHIAREFLR+MAQPYDK GS G K
Sbjct: 657 IFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLRRMAQPYDKTGSGGNK 716
Query: 736 TLLSQADLEKMTNDG 750
TLL++ DL+ M D
Sbjct: 717 TLLTEEDLQNMAQDA 731
>gi|302816593|ref|XP_002989975.1| hypothetical protein SELMODRAFT_269587 [Selaginella moellendorffii]
gi|300142286|gb|EFJ08988.1| hypothetical protein SELMODRAFT_269587 [Selaginella moellendorffii]
Length = 752
Score = 1205 bits (3118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/749 (76%), Positives = 654/749 (87%), Gaps = 6/749 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +E +TVYFPY+ IY EQY+YM+ELK ALDA+GHCLLEMPTGTGKTI LLSLITSY
Sbjct: 1 MKFVIEGLTVYFPYEFIYREQYAYMVELKHALDARGHCLLEMPTGTGKTITLLSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA-AKILAIGLSSRKNLCVNS 119
L+ P + KLIYCTRTVHEMEK L EL+ LH YQ + +G + AKILA+GLSSRKNLC++
Sbjct: 61 LANP-SLAKLIYCTRTVHEMEKVLDELRRLHLYQEKEIGSSRAKILALGLSSRKNLCIHP 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
V + +R+SVDA CRK TASWVRA A NP+IETC F++ YEK S LPPGVYTL D
Sbjct: 120 VVSSETSRESVDAGCRKLTASWVRAAAETNPDIETCSFYQGYEKQGSEQPLPPGVYTLHD 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
LR +G+Q+GWCPYFLAR M+QFANVVVY+YQYLLDPKV+GIISKEMQKE +VVFDEAHNI
Sbjct: 180 LRVYGRQRGWCPYFLARQMIQFANVVVYNYQYLLDPKVSGIISKEMQKECIVVFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL- 298
DNVCIEALSV++R+ L+GA+RN+ ++NQ I RFK TDA RLR EYNRLVEGLA +GNL
Sbjct: 240 DNVCIEALSVNLRQNNLDGASRNIHKLNQIISRFKETDANRLRQEYNRLVEGLAQQGNLH 299
Query: 299 -PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+ WL+NP LP DIL+EAVPGNIRRAEHF+ L+R VQYLR RL+T+ V KEGPVSF
Sbjct: 300 GSDNWLANPVLPEDILREAVPGNIRRAEHFVAFLQRAVQYLRERLDTDTVVKEGPVSFTT 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+++ AG+DQK L+FCY+RLHSL+LTLE+T+ DEFLH+QT+C+F TLVGTYTRGFSIIIE
Sbjct: 360 TMSTAAGLDQKALKFCYDRLHSLLLTLEVTEIDEFLHVQTVCNFLTLVGTYTRGFSIIIE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P+DERMPHIPDPVLQLSC DASLA+KPVFDRFQSVVITSGTLSPIDLYPRLLNF+PV+
Sbjct: 420 PYDERMPHIPDPVLQLSCLDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFNPVIIH 479
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF M+LTRDC+CPM+L RGSDQLPVS+KFDMRSDPGV RNYG+LL+EMV+ VPDG+VCFF
Sbjct: 480 SFTMTLTRDCLCPMILARGSDQLPVSSKFDMRSDPGVVRNYGRLLLEMVATVPDGVVCFF 539
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
VSYSYMD II +WN+ GIL+E+MQHKLVFIETQD VETTLAL+N+R+ACDCGRGAVFFSV
Sbjct: 540 VSYSYMDGIINSWNEMGILQEVMQHKLVFIETQDYVETTLALENFRQACDCGRGAVFFSV 599
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL ARLEYLRDTFQIKEGDFLTFDA+RQ
Sbjct: 600 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILNARLEYLRDTFQIKEGDFLTFDAVRQ 659
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AAQCVGRVIRSKADYGMMIFADKRY+ +KR+KLP WI S LR+ HLNLSTDMA+HIARE
Sbjct: 660 AAQCVGRVIRSKADYGMMIFADKRYNLPNKRNKLPQWIQSQLREEHLNLSTDMAVHIARE 719
Query: 718 FLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
FLR+MAQP D + + TLLSQ DLEKM
Sbjct: 720 FLRRMAQPSDP--QVSKSTLLSQEDLEKM 746
>gi|302771019|ref|XP_002968928.1| hypothetical protein SELMODRAFT_91042 [Selaginella moellendorffii]
gi|300163433|gb|EFJ30044.1| hypothetical protein SELMODRAFT_91042 [Selaginella moellendorffii]
Length = 768
Score = 1192 bits (3084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/765 (74%), Positives = 652/765 (85%), Gaps = 22/765 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +E +TVYFPY+ IY EQY+YM+ELK ALDA+GHCLLEMPTGTGKTI LLSLITSY
Sbjct: 1 MKFVIEGLTVYFPYEFIYREQYAYMVELKHALDARGHCLLEMPTGTGKTITLLSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA-AKILAIGLSSRKNLCVNS 119
L+ P + KLIYCTRTVHEMEK L EL+ LH YQ + +G + AKILA+GLSSRKNLC++
Sbjct: 61 LANP-SLAKLIYCTRTVHEMEKVLDELRRLHLYQEKEIGSSRAKILALGLSSRKNLCIHP 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
V +R+SVDA CRK TASWVRA A N +IETC F++ YEK S LPPGVYTL D
Sbjct: 120 VVSGETSRESVDAGCRKLTASWVRAAAETNLDIETCSFYQGYEKQGSEQPLPPGVYTLHD 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
LR +G+Q+GWCPYFLAR M+QFANVVVY+YQYLLDPKV+GIISKEMQKE +VVFDEAHNI
Sbjct: 180 LRVYGRQRGWCPYFLARQMIQFANVVVYNYQYLLDPKVSGIISKEMQKECIVVFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL- 298
DNVCIEALSV++R+ L+GA+RN+ ++NQ I RFK TDA RLR EYNRLVEGLA +GNL
Sbjct: 240 DNVCIEALSVNLRQNNLDGASRNIHKLNQIISRFKETDANRLRQEYNRLVEGLAQQGNLH 299
Query: 299 -PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+ WL+NP LP DIL+EAVPGNIRRAEHF+ L+R VQYLR RL+T+ V KEGPVSF
Sbjct: 300 GSDNWLANPVLPEDILREAVPGNIRRAEHFVAFLQRAVQYLRERLDTDTVVKEGPVSFTT 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+++ AG+DQK L+FCY+RLHSL+LTLE+T+ DEFLH+QT+C+F TLVGTYTRGFSIIIE
Sbjct: 360 TMSTAAGLDQKALKFCYDRLHSLLLTLEVTEIDEFLHVQTVCNFLTLVGTYTRGFSIIIE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P+DERMPHIPDPVLQLSC DASLA+KPVFDRFQSVVITSGTLSPIDLYPRLLNF+PV+
Sbjct: 420 PYDERMPHIPDPVLQLSCLDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFNPVIIH 479
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF M+LTRDC+CPM+L RGSDQLPVS+KFDMRSDPGV RNYG+LL+EMV+ VPDG+VCFF
Sbjct: 480 SFTMTLTRDCLCPMILARGSDQLPVSSKFDMRSDPGVVRNYGRLLLEMVATVPDGVVCFF 539
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
VSYSYMD II +WN+ GIL+E+MQHKLVFIETQD VETTLAL+N+R+ACDCGRGAVFFSV
Sbjct: 540 VSYSYMDGIINSWNEMGILQEVMQHKLVFIETQDYVETTLALENFRQACDCGRGAVFFSV 599
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL-- 655
ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL ARLEYLRDTFQIKEGDFLTFDA+
Sbjct: 600 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILNARLEYLRDTFQIKEGDFLTFDAVAS 659
Query: 656 --------------RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
RQAAQCVGRVIRSKADYGMMIFADKRY+ +KR+KLP WI S LR+
Sbjct: 660 SLRSVLRLFVYLYQRQAAQCVGRVIRSKADYGMMIFADKRYNLPNKRNKLPQWIQSQLRE 719
Query: 702 AHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
HLNLSTDMA+HIAREFLR+MAQP D + + TLLSQ DLEKM
Sbjct: 720 EHLNLSTDMAVHIAREFLRRMAQPSDP--QVSKSTLLSQEDLEKM 762
>gi|357114542|ref|XP_003559059.1| PREDICTED: DNA repair helicase UVH6-like [Brachypodium distachyon]
Length = 752
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/744 (75%), Positives = 636/744 (85%), Gaps = 17/744 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L+ + V FPYD IYPEQ+ YM ELKRALDA+GH LLEMPTGTGKT AL+SLITSY
Sbjct: 1 MWFDLDGLPVCFPYDAIYPEQHEYMGELKRALDARGHALLEMPTGTGKTAALISLITSYA 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA--AKILAIGLSSRKNLCVN 118
L+ P P++L YCTRTVHEMEKTLAEL+LL + HL PA ++LA+GLSSRKNLCV+
Sbjct: 61 LANPSRPLRLFYCTRTVHEMEKTLAELRLLFS----HLPPADACRLLALGLSSRKNLCVH 116
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIET--CEFFENYEKAAS----AAVLPP 172
+V A+ +VD CR+ TASWV AA + T C++FE ++ AA A + P
Sbjct: 117 PQVSAS---GAVDTGCRRLTASWVCEKAAYDRESATPLCDYFETFDAAARKGDLALYIQP 173
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
GVYTL DLR+ G+++ CPYFLARHMV+ ANVVVYSYQYLLDP+VA I+S EMQK+ VVV
Sbjct: 174 GVYTLADLRSLGRERRICPYFLARHMVKHANVVVYSYQYLLDPRVASIVSSEMQKDCVVV 233
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
FDE HNIDNVCIEALSVS+R+QT++GA NL I+Q+I+RFKATDA RL AEY RLV+GL
Sbjct: 234 FDEVHNIDNVCIEALSVSIRKQTIQGAKGNLRHISQQIDRFKATDASRLNAEYRRLVDGL 293
Query: 293 ALRGNLP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKE 350
A RGNLP +AWL+N ALP DILKEAVPGNIR+AEHFL VL RLV+ L R++TENV E
Sbjct: 294 AQRGNLPISDAWLANLALPDDILKEAVPGNIRKAEHFLTVLWRLVRNLDERVDTENVVNE 353
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTR 410
PVSF SI + AGI+ TLRF Y+RL SL+LTLEITDTDEF+HIQ ICDFATL+GTY R
Sbjct: 354 RPVSFATSIYSLAGIETTTLRFLYDRLQSLLLTLEITDTDEFMHIQKICDFATLIGTYKR 413
Query: 411 GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN 470
GFSIIIEP+D+RMP I DPV+QLSCHDASLA++PVF+RFQ+VVITSGTLSPIDLYPRLLN
Sbjct: 414 GFSIIIEPYDDRMPDIRDPVIQLSCHDASLAIQPVFNRFQTVVITSGTLSPIDLYPRLLN 473
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
F+PV+SRSF MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV RNYG+LL+EM S VP
Sbjct: 474 FNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVP 533
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
DGIVCFFVSYSYMD I+++WND GIL+EIMQHKLVFIET DVVETTLALDNYRKACDCGR
Sbjct: 534 DGIVCFFVSYSYMDGIVSSWNDMGILQEIMQHKLVFIETPDVVETTLALDNYRKACDCGR 593
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL 650
GAVFFSVARGKV EGIDF+RHYGRLVIMFGVPFQYTLSKIL ARLEYLR+T QI+EGDFL
Sbjct: 594 GAVFFSVARGKVVEGIDFNRHYGRLVIMFGVPFQYTLSKILRARLEYLRETSQIQEGDFL 653
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDM 710
TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI SHL DAHLNLSTDM
Sbjct: 654 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIRSHLHDAHLNLSTDM 713
Query: 711 ALHIAREFLRKMAQPYDKAGSIGR 734
ALH AREFLR+MAQPYDKAGS G+
Sbjct: 714 ALHTAREFLRRMAQPYDKAGSSGQ 737
>gi|449491590|ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
[Cucumis sativus]
Length = 598
Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/597 (87%), Positives = 561/597 (93%), Gaps = 2/597 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F+LEDVTVYFPYD+IYPEQY+YMLELKRALDAKGHCLLEMPTGTG TIALLSLITSY
Sbjct: 1 MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGXTIALLSLITSYA 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LSKP+NPVKLIYCTRTVHEMEKTLAEL+LLH+YQ + LGP A+ILA+GLSSRKNLCVN
Sbjct: 61 LSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPN 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VLA+E+RDSVDA CRK TASWVRA+AAENP++ TCEFFE YEKA S+AVLPPGVYTLQDL
Sbjct: 121 VLASESRDSVDAGCRKLTASWVRAMAAENPDVPTCEFFEQYEKAGSSAVLPPGVYTLQDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RAFG ++GWCPYFLARHMVQFANVVVYSYQYLLDPKVA IISKEMQ+ESVVVFDEAHNID
Sbjct: 181 RAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCIEALSVSVRRQT+EGA RNL+++ QEIERFK TDAGRLRAEYNRLVEGLA RGNLP
Sbjct: 241 NVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI 300
Query: 300 -NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ WLSNPALP DILKEAVPGNIRRAEHF+HVLRRLVQYL GRL+TENVEKEG V+FV S
Sbjct: 301 SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I + AGIDQKTL+FCY+RLHSLMLTLEITDTDEFLH+QTICDFATLVGTY RGFSIIIEP
Sbjct: 361 IGSQAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHVQTICDFATLVGTYARGFSIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
DERMPHIPDPVLQLSCHDASLA+KPVF+RFQSVVITSGTLSPIDLYPRLLNF+PVVSRS
Sbjct: 421 VDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F MSLTRDCICPMVLTRGSDQLPVSTKFDMRSD GV RNYG+LL+EMVS VPDGIVCFFV
Sbjct: 481 FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
SYSYMD II +WN++GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF
Sbjct: 541 SYSYMDGIINSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 597
>gi|384253341|gb|EIE26816.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 771
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/772 (66%), Positives = 623/772 (80%), Gaps = 24/772 (3%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +E +TVYFPYD IYPEQ+ YMLELK ALDAKGHCLLEMPTGTGKTI LLSLITSY
Sbjct: 1 MRFVIEGLTVYFPYDYIYPEQFQYMLELKHALDAKGHCLLEMPTGTGKTITLLSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA----KILAIGLSSRKNLC 116
L+ PE KLIYCTRTV EMEK LAELK L +Y+ R+ KILA+GLSSRKNLC
Sbjct: 61 LAHPEVG-KLIYCTRTVPEMEKVLAELKELVHYRDRYFHEPGMEPPKILALGLSSRKNLC 119
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
V+ RV +R+S D+ CRK TASWVR NP+IETC F+E E A + V+ PGVYT
Sbjct: 120 VHPRVSEEGSRESCDSQCRKLTASWVREAHVTNPDIETCTFYEGLEAAGAEGVMEPGVYT 179
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPK---------VAGIISKEMQK 227
LQD+R +G+++GWCPYF ARHM+ FANV+VY+YQY+LDPK V+ ++S+E++K
Sbjct: 180 LQDMREYGRKKGWCPYFTARHMLAFANVMVYNYQYMLDPKASNAATLPPVSNMVSRELEK 239
Query: 228 ESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNR 287
E VVVFDEAHNIDNVCIEALSV++RRQTL+ A RN+ ++ +++ KATD RL+AEY R
Sbjct: 240 ECVVVFDEAHNIDNVCIEALSVTLRRQTLDSAMRNVGKLKAAVDKCKATDEQRLKAEYQR 299
Query: 288 LVEGLALRGNLPNA--------WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR 339
L+ GL RG LP WL+NPALP DIL+EAVPGNIRRAEHF L+RLV++L+
Sbjct: 300 LIGGLQERGALPRGRPTPGGEDWLANPALPEDILREAVPGNIRRAEHFCAFLKRLVEHLK 359
Query: 340 GRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC 399
GR+ + VE+E +F+A++ +D KTLRFCY+RL SL+ TLEITD D+F I +
Sbjct: 360 GRISVQAVEQESCTTFLATLQESMAVDGKTLRFCYDRLSSLLKTLEITDMDDFTPIHLVA 419
Query: 400 DFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTL 459
DFATLVGTY +GF+II+EP+D+R+P +PDPV+QLSC DASLAV+PVF +FQ+VVITSGTL
Sbjct: 420 DFATLVGTYAKGFAIIVEPYDDRLPSVPDPVIQLSCLDASLAVRPVFQKFQTVVITSGTL 479
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
SPIDLYPR+LNF+PV +SF M+LTRDC+CP+VLTRG+DQ VST FDMR D V RNYG
Sbjct: 480 SPIDLYPRILNFNPVAIQSFAMTLTRDCMCPVVLTRGADQAAVSTAFDMREDENVIRNYG 539
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
++LVE+ + +PDGIVCFFVSYSYMD+I++ WND GIL+++M HKLVFIET DVVETTLAL
Sbjct: 540 RMLVELAAAIPDGIVCFFVSYSYMDKIVSKWNDMGILQDLMAHKLVFIETVDVVETTLAL 599
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
DN+R+ACDCGRGAVF SVARGKVAEGIDFDRHYGR V+MFGVP+QYTLS+IL ARLEYLR
Sbjct: 600 DNFRRACDCGRGAVFLSVARGKVAEGIDFDRHYGRCVVMFGVPYQYTLSRILRARLEYLR 659
Query: 640 DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+TFQIKE D+L+FDA+RQAAQCVGRVIRSKADYG+M+FADKRY R DKR KLPGWI +HL
Sbjct: 660 ETFQIKESDYLSFDAVRQAAQCVGRVIRSKADYGLMVFADKRYQRADKRDKLPGWITTHL 719
Query: 700 RDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGS 751
+DAHLNLSTDM +HIAREF+R MAQPYD +IG K+LL++A M+ G+
Sbjct: 720 KDAHLNLSTDMLMHIAREFMRAMAQPYDGL-AIG-KSLLTEAQANAMSGTGA 769
>gi|303271817|ref|XP_003055270.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463244|gb|EEH60522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 741
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/739 (66%), Positives = 616/739 (83%), Gaps = 11/739 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIF LE +TVYFPY+ +YPEQY YM ELKR LDAKGH LEMPTGTGKTI L+LITSY
Sbjct: 1 MIFNLEGLTVYFPYEYLYPEQYKYMQELKRGLDAKGHGCLEMPTGTGKTITCLALITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L+ PE KLIYCTRTV EMEK LAEL++L Y+ +H+G AA +LA+GLSSRKN+CV+ R
Sbjct: 61 LAHPECG-KLIYCTRTVPEMEKVLAELRVLQAYREKHVGEAAAMLALGLSSRKNMCVHPR 119
Query: 121 VLAAENRDSVDAACRKRTASWVR-----ALAA-ENPNIETCEFFENYEKAASAAVLPPGV 174
V +R+SVDA CR+ TASWVR ALA+ E P E C+FFE+YE+ AVLPPGV
Sbjct: 120 VAEEGSRESVDARCRQLTASWVREKHNSALASGEEPTTELCQFFEDYEREGPDAVLPPGV 179
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
YTL DLR FG+ +GWCPYF ARHM++ +NV+VY+YQYLLDPKV+ ++S+E++KE VVVFD
Sbjct: 180 YTLADLRQFGRTKGWCPYFTARHMIKCSNVIVYNYQYLLDPKVSSLVSRELEKECVVVFD 239
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL 294
EAHNIDNVCIEALSV++R+QTL+ A RN++ ++ +IER K TD RLRAEY+ LV GLA
Sbjct: 240 EAHNIDNVCIEALSVNLRQQTLDVAGRNITALSAKIERAKQTDERRLRAEYDALVNGLAN 299
Query: 295 RGNLPNAW----LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKE 350
+G LP ++NP +P+DIL+EAVPGNIRRAEHF+ +RRLV+YL+ RL+ VE+E
Sbjct: 300 QGVLPRGGGEDAIANPVIPADILREAVPGNIRRAEHFVAFMRRLVEYLKQRLKATQVEQE 359
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTR 410
P++F+A ++ A ID KTL+FC++RL SL+ TLEI DT+EF + + DF TLVGTY +
Sbjct: 360 TPMAFLAHLSQTAAIDGKTLKFCHDRLTSLLKTLEIVDTEEFNAVSLVADFGTLVGTYEK 419
Query: 411 GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN 470
GF++I+EP+DER P+IPDPVLQLSC DASLA+ PVF+RF +V ITSGTLSPIDLYP+LL+
Sbjct: 420 GFALILEPYDERYPNIPDPVLQLSCLDASLAIAPVFERFDNVFITSGTLSPIDLYPKLLS 479
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
F+PV S M+LTRDC+CP+V+TRG+DQ VSTKFDMR DPGV +NYG++L++M + VP
Sbjct: 480 FNPVACISLPMTLTRDCLCPIVITRGADQQAVSTKFDMRDDPGVIQNYGRILIDMAASVP 539
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
DG+V FFVSYSYM++I++ W+++G+L+ +MQHKLVFIETQDVVET+LALDNYR+AC+CGR
Sbjct: 540 DGLVAFFVSYSYMEQIVSKWHETGVLQNVMQHKLVFIETQDVVETSLALDNYRRACNCGR 599
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL 650
GAVF SVARGKVAEGIDFDRHYGR VIM+GVP+QYTLS+IL ARLEYLR+TFQIKE DFL
Sbjct: 600 GAVFLSVARGKVAEGIDFDRHYGRAVIMYGVPYQYTLSRILRARLEYLRETFQIKEADFL 659
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDM 710
FDA+RQAAQCVGRVIRSKADYG+M+FADKRY+ HDKR KLPGWI +HL++ LNLSTDM
Sbjct: 660 AFDAVRQAAQCVGRVIRSKADYGLMVFADKRYNSHDKRGKLPGWITTHLKEERLNLSTDM 719
Query: 711 ALHIAREFLRKMAQPYDKA 729
A+H+AR F+R+MAQPYD+
Sbjct: 720 AVHVARTFMREMAQPYDRG 738
>gi|302836153|ref|XP_002949637.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
gi|300264996|gb|EFJ49189.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
Length = 780
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/757 (67%), Positives = 619/757 (81%), Gaps = 25/757 (3%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F LE +TVYFPY+ IYPEQY YMLELKRALDA+GHCLLEMPTGTGKTI LLSLITSY
Sbjct: 1 MKFNLEGLTVYFPYEYIYPEQYRYMLELKRALDARGHCLLEMPTGTGKTITLLSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG--PAA-KILAIGLSSRKNLCV 117
L+ E KLIYCTRTV EMEK LAEL L +Y+ ++LG P + +ILA+GLSSRKNLC+
Sbjct: 61 LAHKEVG-KLIYCTRTVPEMEKVLAELAELIDYRAKYLGRGPGSNEILALGLSSRKNLCI 119
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAEN------------------PNIETCEFFE 159
+ RV +R+SVDA CR+ TASWVR AAE +IE C+FFE
Sbjct: 120 HPRVAEEGSRESVDAGCRRLTASWVRERAAERGARGGEGGAEEGGSGGSVADIELCDFFE 179
Query: 160 NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAG 219
+E+A A+LPPGVYTL DLR FG+++GWCPYFLARHM+ FANVVVY+YQY++DPKV+
Sbjct: 180 GHERAGVEALLPPGVYTLSDLRDFGRKRGWCPYFLARHMMAFANVVVYNYQYMIDPKVSQ 239
Query: 220 IISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAG 279
++S+E++KE VVVFDEAHNIDNVCIEALSV++R+QTLE A RNL +++ I R + DA
Sbjct: 240 MVSRELEKECVVVFDEAHNIDNVCIEALSVNLRKQTLEAAGRNLGKLSNSIRRAREADAA 299
Query: 280 RLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY 337
RL+ EYNRLV GL +G L WL+NPALP D+++E VPGNIRRAEHF+ L R + +
Sbjct: 300 RLQGEYNRLVAGLVAQGALRGGEDWLANPALPEDVVQETVPGNIRRAEHFMGFLNRFLAF 359
Query: 338 LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
LR ++ + V + P F+ + +D KTL+FCY+RL SL+ TLEIT+TDEF IQ
Sbjct: 360 LREKMASPVVTSQTPQVFLQELQERVQVDAKTLKFCYDRLSSLLKTLEITNTDEFTPIQL 419
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
+ DFATLVGTY +GF+II+EP+DER+P +PDPVLQLSC DASLA+KPVF +FQSVVITSG
Sbjct: 420 VADFATLVGTYAKGFAIIMEPYDERLPQVPDPVLQLSCLDASLAMKPVFSKFQSVVITSG 479
Query: 458 TLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARN 517
TLSPIDLYPR+LNF+PV +SF+M+LTRDC+CP+V+TRG+DQ+P+STKF+MR DPGV RN
Sbjct: 480 TLSPIDLYPRILNFNPVAIQSFQMTLTRDCLCPVVVTRGADQMPMSTKFEMRGDPGVMRN 539
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTL 577
YG+LLVE+ ++VPDGIV FFVSY YMD+II+ W+D GIL+EIMQHKL+FIETQDVVETTL
Sbjct: 540 YGRLLVELSAVVPDGIVAFFVSYRYMDQIISKWHDMGILQEIMQHKLIFIETQDVVETTL 599
Query: 578 ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
ALDN+R+ACD GRGAVF SVARGKVAEGIDFDRHYGR V+MFGVP+QYTLS+IL ARLEY
Sbjct: 600 ALDNFRRACDSGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPYQYTLSRILRARLEY 659
Query: 638 LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
LR+TFQIKE D+L FDA+RQAAQCVGRVIRSKADYGMMIFADKRY RHDKR KLP WI
Sbjct: 660 LRETFQIKENDYLAFDAVRQAAQCVGRVIRSKADYGMMIFADKRYQRHDKRDKLPQWITR 719
Query: 698 HLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGR 734
HL++AH+NLSTDM +H+AREFLR MAQPYD+ G++G+
Sbjct: 720 HLKEAHMNLSTDMMVHVAREFLRAMAQPYDR-GAVGK 755
>gi|255072415|ref|XP_002499882.1| predicted protein [Micromonas sp. RCC299]
gi|226515144|gb|ACO61140.1| predicted protein [Micromonas sp. RCC299]
Length = 797
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/759 (65%), Positives = 619/759 (81%), Gaps = 15/759 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIF LE +TVYFPY+ +YPEQY YMLELKRALDAKGH LEMPTGTGKTI LSLITSY
Sbjct: 1 MIFNLEGLTVYFPYEYLYPEQYRYMLELKRALDAKGHGCLEMPTGTGKTITCLSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L PE KLIYCTRTV EMEK LAEL+ L Y+ +H+G A++I+A+GLSSRKN+C++ +
Sbjct: 61 LQNPECG-KLIYCTRTVPEMEKVLAELRNLQAYREKHVGKASQIMALGLSSRKNMCIHPK 119
Query: 121 VLAAENRDSVDAACRKRTASWVR--ALAA-------ENPNIETCEFFENYEKAASAAVLP 171
V +R+SVDA CR+ TASWVR +AA E CEFFE+YEK A+LP
Sbjct: 120 VADEGSRESVDANCRRLTASWVRDKHMAALANEEEAPENAPELCEFFEDYEKEGPNAILP 179
Query: 172 PGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
PGVYTL DLR FG+++GWCPYFLARHM+ FANVVVY+YQYLLDPKVA ++S+E+++E VV
Sbjct: 180 PGVYTLADLRDFGRKKGWCPYFLARHMISFANVVVYNYQYLLDPKVANMVSRELERECVV 239
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEG 291
VFDEAHNIDNVCIEALSV++R+QTL+GA+RN++++ Q IE KA D RLR EY RLV G
Sbjct: 240 VFDEAHNIDNVCIEALSVNLRQQTLDGASRNIAQLTQRIEHVKAHDEQRLREEYTRLVNG 299
Query: 292 LALRGNLPNA----WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
LA +G L A ++NP + DIL+EAVPGNIRRAEHF+ LRR V+YL+ R+ +V
Sbjct: 300 LAQQGVLDRARSDQLIANPVISEDILREAVPGNIRRAEHFIAFLRRFVEYLKQRMRGGSV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E+E P++F+A + A ID KTL+FCY+R+ SL+ TLE+ DT++F I ICDFATLVGT
Sbjct: 360 EQETPIAFLAHLQQTAAIDGKTLKFCYDRITSLLKTLEVVDTEDFSAISLICDFATLVGT 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y +GF++I+EP+DER P+IPDPV QL+C DAS A+ PVFD+F SV ITSGTLSPI+LYP+
Sbjct: 420 YEKGFALILEPYDERYPNIPDPVFQLTCLDASYAIAPVFDKFNSVFITSGTLSPINLYPQ 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
LL F PV S + M+LTR+C+CPMV+TRG+DQ VSTKFDMR DPGV +NYG++L+++ S
Sbjct: 480 LLGFKPVCSAALDMTLTRECLCPMVITRGADQQMVSTKFDMRDDPGVIQNYGRVLIDLCS 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
VPDGIV FFVSYSYM++II+ W+++G+L+++M+ KLVF+ETQDVVET+LALDNYR+AC+
Sbjct: 540 CVPDGIVAFFVSYSYMEQIISKWHETGVLQQVMRRKLVFLETQDVVETSLALDNYRRACN 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
CGRGAVF SVARGK+AEGIDFDRHYGR VIM+GVP+QYTLS+IL ARLEYLR+TFQIKE
Sbjct: 600 CGRGAVFLSVARGKIAEGIDFDRHYGRAVIMYGVPYQYTLSRILRARLEYLRETFQIKEA 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+RQAAQCVGRVIRSKADYG+M+F DKRY+ HDKR KLP WI SHL + LNLS
Sbjct: 660 DFLSFDAVRQAAQCVGRVIRSKADYGLMVFCDKRYNSHDKRGKLPKWITSHLHEQQLNLS 719
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
TDMA+ IAR+F+R MAQPYD+AG +G K+LL Q + M
Sbjct: 720 TDMAVAIARQFMRDMAQPYDRAGQMG-KSLLDQNSVNAM 757
>gi|145353086|ref|XP_001420860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581095|gb|ABO99153.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 788
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/775 (62%), Positives = 602/775 (77%), Gaps = 22/775 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F LE + V+FPY IYPEQ + M E KR+LDA+GH +EMPTGTGKTI +LSL SY
Sbjct: 1 MDFNLEGLRVFFPYPQIYPEQLAMMTEFKRSLDARGHGAIEMPTGTGKTITVLSLCVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-AAKILAIGLSSRKNLCVNS 119
++ PE KLIYCTRTV EMEK LAE + L + G A +LA+GLSSRKN+CVN
Sbjct: 61 IAHPECG-KLIYCTRTVPEMEKVLAECRTLERFIAARAGEDVAAMLALGLSSRKNMCVNP 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRAL--------AAENPNIE------TCEFFENYEKAA 165
RV+ +R+SVD CR+ TASWVR A+EN N+E CEFFE++E A
Sbjct: 120 RVVDEGSRESVDGKCRRLTASWVREKRLEREARGASENENVEDGGEGNCCEFFEDFESAG 179
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
AVLPPGVYTL DLRAFG+ + WCPYFLAR+M+ FANVVVY+YQY+LDPKVA ++S +
Sbjct: 180 EKAVLPPGVYTLHDLRAFGRTKKWCPYFLARNMISFANVVVYNYQYMLDPKVASLVSSSL 239
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY 285
+KE +VVFDEAHNIDNVCIEALSV++R+QTLE A R+++ +N I+R K TD RLR EY
Sbjct: 240 EKECIVVFDEAHNIDNVCIEALSVNLRQQTLENAGRSITSLNTRIDRAKQTDERRLRQEY 299
Query: 286 NRLVEGLALRGNLPNAW----LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
RLV GLA +G L L NP +P DIL+EAVPGNIRRAEHF+ VL+R V+YL R
Sbjct: 300 ERLVNGLAQQGVLARGGGEDVLMNPIIPDDILREAVPGNIRRAEHFVAVLKRFVEYLNMR 359
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF 401
L + VE+E P +F+ A+AGID KTL+FCY+RL SL+ TLE+ D DEF + + +F
Sbjct: 360 LRSTQVEQETPTAFLQHCAANAGIDGKTLKFCYDRLTSLLKTLEVVDMDEFNALSLVANF 419
Query: 402 ATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSP 461
A LVGTY+ GF++I+EP+DER P+IPDPVLQL+C DASLA+KPVF+RFQSV ITSGTLSP
Sbjct: 420 AALVGTYSNGFALILEPYDERYPNIPDPVLQLACLDASLAIKPVFERFQSVFITSGTLSP 479
Query: 462 IDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKL 521
IDLYP+LL F+PV RS M+LTRDC+CPMV+TRG+DQ VSTKFDMR DP V +NYG++
Sbjct: 480 IDLYPKLLGFNPVSVRSLAMTLTRDCLCPMVITRGADQQAVSTKFDMRDDPNVIQNYGRI 539
Query: 522 LVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN 581
L+ + VPDGIV FFVSYSYM+ I++ W+++GIL+EIMQHKLVFIET DVVET+LALDN
Sbjct: 540 LIGLAQTVPDGIVAFFVSYSYMENIVSKWHETGILREIMQHKLVFIETTDVVETSLALDN 599
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT 641
YR+AC+CGRGA+F SVARGKVAEGIDFDRHYGR V+M+GVP+QYTLS+IL ARLEYLR+T
Sbjct: 600 YRRACNCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMYGVPYQYTLSRILRARLEYLRET 659
Query: 642 FQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
FQIKE DFL FDA+RQAAQCVGRVIRSK DYG+M+FADKRY+ DKR KLPGWI +HLR+
Sbjct: 660 FQIKESDFLAFDAVRQAAQCVGRVIRSKKDYGLMVFADKRYNSQDKRGKLPGWITTHLRE 719
Query: 702 AHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEML 756
LNLSTDMA+ +AR F+R M+QP+ + ++LL QA ++++ +G E L
Sbjct: 720 EVLNLSTDMAMQVARTFMRSMSQPFSHDENT--QSLLDQAMVDRLAVEGGWREAL 772
>gi|424513271|emb|CCO66855.1| predicted protein [Bathycoccus prasinos]
Length = 770
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/750 (61%), Positives = 575/750 (76%), Gaps = 30/750 (4%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M+ELK ALDAKGH LEMPTGTGKTI LLSLITSY L P + KLIYCTRTV EMEK L
Sbjct: 1 MIELKHALDAKGHGALEMPTGTGKTITLLSLITSYQLQYPHSCGKLIYCTRTVPEMEKVL 60
Query: 85 AELKLLHNYQTRHLGPAAK----ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTAS 140
AELK+L Y+ H+ + ILA+GLSSRKNLCVN +V +R+SVDA CR TAS
Sbjct: 61 AELKVLQKYREEHVEKGKEEETHILALGLSSRKNLCVNPKVSEEGSRESVDARCRNLTAS 120
Query: 141 WVRALAAENP--------NIET------------CEFFENYEKAASAAVLPPGVYTLQDL 180
WVR A E I+T CEF+E+ E + A +P GVYTLQDL
Sbjct: 121 WVRDKAKEEAEEGDQKGTKIKTVLENEKIRKSNLCEFYEDLEALGAEAEVPKGVYTLQDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
R FG+++ WCPYFLAR +Q ANVVVY+YQYLLDPKVAG++S+E + ++VVFDEAHNID
Sbjct: 181 REFGREKRWCPYFLARQTLQRANVVVYNYQYLLDPKVAGLVSREFEDNAIVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIEALSV++R QTL+ A RN++ +N I K TD RL+ EY RLV GLA +G +
Sbjct: 241 NVCIEALSVNLRSQTLDAAQRNITTLNTRITEVKKTDRKRLQDEYERLVSGLANQGAISR 300
Query: 301 A----WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
++NP + D+++E +PGNIRRAEHF+ ++RR V++LR L +V + P F+
Sbjct: 301 QRGEDLMANPVISEDVVQEVIPGNIRRAEHFVAIMRRFVEFLRHELRAPSVVQTAPRMFI 360
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
A G+D KTL+FCY+RL SL+ TLEI DT+EF + ++ DFATL+GTY +GF+II+
Sbjct: 361 QKSEAGGGVDAKTLKFCYDRLTSLLKTLEIVDTEEFGALSSVADFATLIGTYDQGFTIIM 420
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP+DER PHIPDPVLQL+C DASLAVKPVF+++QSV ITSGTLSPIDLYPRLL F P V
Sbjct: 421 EPYDERYPHIPDPVLQLACLDASLAVKPVFEKYQSVFITSGTLSPIDLYPRLLKFRPNVM 480
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
+S M+LTR C+CPMV+TRG+DQ +S+KFDMR DP V +NYGK+LV + +PDGIV F
Sbjct: 481 KSLMMTLTRKCLCPMVITRGADQQHISSKFDMREDPNVIQNYGKVLVGLAQSIPDGIVAF 540
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
FVSYSYM+ II+ W+D+GIL+EIMQHKL+F+ETQDVVET+LALDNYR+AC+ GRGAVF S
Sbjct: 541 FVSYSYMENIISKWHDTGILREIMQHKLIFMETQDVVETSLALDNYRRACNAGRGAVFLS 600
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKVAEGIDFDRHYGR V+M+GVP+QYTLS+IL ARLEYLR+T QIKE DFLTFDA+R
Sbjct: 601 VARGKVAEGIDFDRHYGRAVVMYGVPYQYTLSRILRARLEYLRETLQIKEQDFLTFDAIR 660
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
QA+QC+GRVIRSKADYG+M+FADKRY+ HDKRSKLP WI +H+ + LNLSTDMAL ++R
Sbjct: 661 QASQCIGRVIRSKADYGLMVFADKRYNSHDKRSKLPKWISNHMTEELLNLSTDMALTVSR 720
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
F+R M+QP+ AG G KTL Q ++++
Sbjct: 721 AFMRHMSQPFS-AGEAG-KTLFDQQKVDEI 748
>gi|296086736|emb|CBI32371.3| unnamed protein product [Vitis vinifera]
Length = 922
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/487 (91%), Positives = 467/487 (95%), Gaps = 3/487 (0%)
Query: 273 FKATDAGRLRAEYNRLVEGLALRGNLP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHV 330
FKATDAGRLRAEYNRLVEGLA RGNLP + WL+NPALP DILKEAVPGNIRRAEHFL V
Sbjct: 437 FKATDAGRLRAEYNRLVEGLAQRGNLPISDTWLANPALPDDILKEAVPGNIRRAEHFLSV 496
Query: 331 LRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
LRRLVQYL GRLETENVEKEGPV+FVASI + AGIDQK L+FCY+RLHSLMLTLEITDTD
Sbjct: 497 LRRLVQYLHGRLETENVEKEGPVAFVASINSQAGIDQKMLKFCYDRLHSLMLTLEITDTD 556
Query: 391 EFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQ 450
EFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA+KPVF+RFQ
Sbjct: 557 EFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFERFQ 616
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
SVVITSGTLSPIDLYPRLLNF+PVVSRSF MSLTR+CICPMVLTRGSDQLPVSTKFDMRS
Sbjct: 617 SVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRNCICPMVLTRGSDQLPVSTKFDMRS 676
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ 570
DPGV RNYG+LL+EMVS+VPDGIVCFFVSYSYMD I+ TWN+SGILKEIMQHKLVFIETQ
Sbjct: 677 DPGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDGIVNTWNESGILKEIMQHKLVFIETQ 736
Query: 571 DVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
DVVETTLALDNYR+ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+I
Sbjct: 737 DVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRI 796
Query: 631 LLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK 690
LLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK
Sbjct: 797 LLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK 856
Query: 691 LPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDG 750
LPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG GRKTLLS+ DLEKM DG
Sbjct: 857 LPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVSGRKTLLSEEDLEKM-GDG 915
Query: 751 SINEMLY 757
+ NEML+
Sbjct: 916 TTNEMLF 922
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/270 (80%), Positives = 231/270 (85%), Gaps = 27/270 (10%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F++EDVTVYFPYDNIYPEQYSYM+ELKRALDAKGH LLEMPTGTGKTIALLSLITSY
Sbjct: 1 MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYA 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
LSKP NP+KL+YCTRTVHEMEKTLAEL+LLH YQ RHLGPAA+ILA+GLSSRKNLC+N
Sbjct: 61 LSKPSNPIKLLYCTRTVHEMEKTLAELRLLHQYQLRHLGPAARILALGLSSRKNLCINPA 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V NPNI TC+FFENYEKAAS AVLPPGVYTLQDL
Sbjct: 121 V---------------------------NPNIPTCQFFENYEKAASEAVLPPGVYTLQDL 153
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
RAFG+ +GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ+ESVVVFDEAHNID
Sbjct: 154 RAFGRDKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNID 213
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEI 270
NVCIEALSVSVRRQTLEGATRNLS++ QEI
Sbjct: 214 NVCIEALSVSVRRQTLEGATRNLSKMAQEI 243
>gi|301097762|ref|XP_002897975.1| TFIIH basal transcription factor complex helicase subunit
[Phytophthora infestans T30-4]
gi|262106420|gb|EEY64472.1| TFIIH basal transcription factor complex helicase subunit
[Phytophthora infestans T30-4]
Length = 763
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/760 (57%), Positives = 566/760 (74%), Gaps = 32/760 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPY+ +Y EQ YM ELKRALDA+GHC+LEMPTGTGKT++LLSL+ +Y
Sbjct: 1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYK 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KL+YCTRTV EM K + E+K L Y+ + G A++ A+ LSSR+N+CV+ R
Sbjct: 61 AAHP-TAGKLVYCTRTVPEMAKCVEEIKKLIKYREHYYGDKAQVTAVCLSSRRNMCVHPR 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE-KAASAAVLPPGVYTLQD 179
V+A + + VD CRK TASWV ETC F+ENY+ + ++ VLPPGVY++ D
Sbjct: 120 VMAHADGEDVDGQCRKMTASWV----------ETCSFYENYDARKSNDTVLPPGVYSVDD 169
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ G ++GWCPYFL R++V FA+VVVY+YQY+LDPKV+ ++S+ +KES+VVFDEAHNI
Sbjct: 170 LKELGVKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNI 229
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL- 298
DNVCIEALSV + R++L+ A+RNL+ ++ ++ + K D RL AEY RLVEGL +
Sbjct: 230 DNVCIEALSVDLDRRSLDRASRNLTTLSGQVNKLKQADKSRLDAEYRRLVEGLRSSNAVV 289
Query: 299 ----------------PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL 342
+ ++NP LP D+L EA+PGNIRRAEHF+ +RRL++YLR R+
Sbjct: 290 APSYTDPATNQAIDTSNDIMIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRI 349
Query: 343 ETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFA 402
VE E P +F+ + ++ K ++FCY RL+SL+ TLE+T+ +E+ + + DFA
Sbjct: 350 RVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFA 409
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
TLV TY GF +IIEPFD + DPVLQLSC DASLA++PVF+RF SVVITSGTLSPI
Sbjct: 410 TLVATYAEGFMLIIEPFDS-ASGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPI 468
Query: 463 DLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLL 522
DLYPRLLNF+PV+ S MS+ R ICP+V+TRGSDQ+PVSTKFD+R D V RNYG LL
Sbjct: 469 DLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLL 528
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY 582
+EM + PDG+VCFF SY YM++II W+ G+LK ++ KL+FIET+D+VETTLALDNY
Sbjct: 529 LEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLSSKLLFIETKDIVETTLALDNY 588
Query: 583 RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF 642
+KACDCGRGA+FFSVARGKVAEGIDFDRHYGR VI+FG+PFQYTLS L ARLEYLR T
Sbjct: 589 KKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTH 648
Query: 643 QIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA 702
QI+EGDFLTFDALRQAAQC GRV+RSK DYG++IFAD RY+R DKR+KLP WIL L ++
Sbjct: 649 QIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWILQFLVNS 708
Query: 703 HLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
HLNLS DMA+ +A+++L MAQP D++ S+ ++L AD
Sbjct: 709 HLNLSVDMAVFMAKKYLSLMAQPVDESTSVN--SILLDAD 746
>gi|325186971|emb|CCA21515.1| predicted protein putative [Albugo laibachii Nc14]
Length = 801
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/761 (57%), Positives = 560/761 (73%), Gaps = 29/761 (3%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPYD +Y EQ YM ELKRALDA GHC+LEMPTGTGKTI+LL+L+ +Y
Sbjct: 1 MKVDIDGLQVLFPYDRMYAEQLQYMRELKRALDAHGHCMLEMPTGTGKTISLLALVLAYR 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-AAKILAIGLSSRKNLCVNS 119
+ P KL+YCTRTV EM K + ELK L Y+T+ L A +I A+ LSSR+N+C++
Sbjct: 61 HAHPSTCGKLVYCTRTVTEMAKCVEELKSLMEYRTQILSTEATQITAVCLSSRRNMCIHE 120
Query: 120 RVLA-AENRDSVDAACRKRTASWVRALAAENP--------NIETCEFFENYE-KAASAAV 169
+VL + + +SVD+ CRK TASWVRA A E P I+ C ++E YE + +
Sbjct: 121 KVLENSTDGESVDSQCRKMTASWVRARAIETPIEQAVSNNGIDLCSYYEQYEARKQDQQL 180
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
LPPGVY+L DL+ GK++GWCPYFL RH+V FA+V+VY+YQY+LDPKV+ ++S+ +KES
Sbjct: 181 LPPGVYSLDDLKRLGKEKGWCPYFLTRHVVNFADVIVYNYQYMLDPKVSQLVSRAFEKES 240
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
++VFDEAHNIDNVCIEALSV + R++L+ A+RNL I+ +++R K D RL AEY RLV
Sbjct: 241 IIVFDEAHNIDNVCIEALSVDLNRRSLDRASRNLGSISTQVQRLKQADRSRLDAEYRRLV 300
Query: 290 EGLALRGNL-----------------PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLR 332
EGL N+ + SNP LP D+L+EA+PGNIRRAEHF+ +R
Sbjct: 301 EGLRASNNILAPTYQNRATGQSIDTTNDILTSNPVLPDDVLEEAIPGNIRRAEHFIAFMR 360
Query: 333 RLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEF 392
RL++YLR RL NVE E P +F+ + ++ K ++FCY RL+SL+ TLEIT +EF
Sbjct: 361 RLIEYLRTRLRVGNVESETPQAFLHHLNQVISMETKPMKFCYTRLNSLLRTLEITKLEEF 420
Query: 393 LHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSV 452
+ + +FATL+ TY GF +I++P D PDPVL L+C DASLA++PV +RF SV
Sbjct: 421 QALTDVANFATLLATYADGFMLIVDPLDN-ASGAPDPVLHLACLDASLAIRPVLERFSSV 479
Query: 453 VITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDP 512
+ITSGTLSPIDLYPRLLNF PV+ S MS+ R CICP+ +TRGSDQ+PVSTKFD+R D
Sbjct: 480 IITSGTLSPIDLYPRLLNFSPVIRESLPMSVYRSCICPLTITRGSDQMPVSTKFDLRDDL 539
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
V RNYG LL+EM + PDG+VCFF SY YM++II W+ G+LK ++Q KL+FIET D+
Sbjct: 540 SVVRNYGTLLLEMAAHCPDGMVCFFPSYLYMEKIIGQWDQLGVLKRVLQFKLLFIETTDI 599
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
VETTLAL+NY++ACDCGRGA+FFSVARGKVAEGIDFDRHYGR VI+FG+PFQYTLS L
Sbjct: 600 VETTLALNNYKRACDCGRGAIFFSVARGKVAEGIDFDRHYGRCVILFGIPFQYTLSHKLR 659
Query: 633 ARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
ARLEYLR T QI+E DFLTFDALRQAAQC GRV+RSK DYG+++FAD RY+R DKRSKLP
Sbjct: 660 ARLEYLRYTHQIREADFLTFDALRQAAQCAGRVLRSKTDYGLILFADSRYNRADKRSKLP 719
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
WI + +++LNLS DMA+H+A+ +L MAQP D+ ++
Sbjct: 720 PWIKQFMVESYLNLSVDMAVHLAKRYLALMAQPVDEKTNVN 760
>gi|320166669|gb|EFW43568.1| nucleotide excision repair protein [Capsaspora owczarzaki ATCC
30864]
Length = 747
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/711 (58%), Positives = 547/711 (76%), Gaps = 3/711 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
MLELKR++DAKGHC+LEMP+GTGKTI+LLSLI S+ + P+ KLIYC+RTV E+EK L
Sbjct: 1 MLELKRSIDAKGHCVLEMPSGTGKTISLLSLIISHQMVNPQMG-KLIYCSRTVPEIEKVL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
E+ L Y G K L +GLS+RKN+C++ V + VD+ CR+ TASWVR
Sbjct: 60 DEMTKLVAYIESETGQRLKFLGLGLSARKNMCIHPEVSKERDGKLVDSKCRELTASWVRT 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
A N +E C F+E ++++ A+LP GVYTL +LRAFG++Q WCPY+LARHM+ FANV
Sbjct: 120 RAENNSEVELCSFYEEFDRSGREALLPAGVYTLDELRAFGQRQNWCPYYLARHMISFANV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
+VYSY YLLDPK+A ++SKE+ KESVVVFDEAHNIDNVCIE++SV + ++TL+ +TRNL+
Sbjct: 180 IVYSYHYLLDPKIANLVSKELAKESVVVFDEAHNIDNVCIESMSVEITKRTLDNSTRNLN 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ I K TD RL+ EY RLV+GL A + L+NP LP +I++EAVPG IR
Sbjct: 240 ALASTISEIKQTDTARLQDEYTRLVQGLREANTARETDLVLANPVLPDEIMQEAVPGTIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ LRR V+YL+ RL ++V E P SF+ + ID+K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLRRFVEYLKNRLRVQHVVAENPTSFLQDLYQAVQIDRKPLRFCAERLGSLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + D+F + T+ +FATLV TY +GFS+IIEPFD+R P IP+PVL SC DASLA+
Sbjct: 360 TLELPNMDDFSALVTVANFATLVSTYAKGFSLIIEPFDDRTPTIPNPVLYFSCMDASLAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KP+FDRFQ+VVITSGTLSPI++YP++LNF PV ++SF M+L+R+C+CP+++TRGSDQ+ V
Sbjct: 420 KPIFDRFQTVVITSGTLSPIEMYPKILNFQPVTAQSFTMTLSRNCVCPVIVTRGSDQVAV 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S++F +R DP V RNYG LLV++ ++VPDG+VCFF SY+YM+ I+A W++ G+L ++++
Sbjct: 480 SSRFQVRDDPAVVRNYGSLLVDLSAVVPDGLVCFFPSYTYMESIVAKWHEQGVLTNLLRN 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KLVFIETQD ET++ALDNY+KAC+ GRGAV SVARGKV+EGIDFD HYGR VI+FG+P
Sbjct: 540 KLVFIETQDGAETSIALDNYQKACENGRGAVLLSVARGKVSEGIDFDHHYGRAVILFGIP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARL+YLR+ FQI+EGDFLTFDALR AQCVGR IR K+DYGMMIFADKR+
Sbjct: 600 YVYTESRILRARLDYLREQFQIREGDFLTFDALRHGAQCVGRAIRGKSDYGMMIFADKRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
+R DK+ KLP WI ++ D NLS D A+ +A+ FLR MAQP++K +G
Sbjct: 660 ARLDKKGKLPKWIQQYMTDDLCNLSVDEAVQVAKRFLRNMAQPFNKDDQLG 710
>gi|348678980|gb|EGZ18797.1| hypothetical protein PHYSODRAFT_354695 [Phytophthora sojae]
Length = 791
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/769 (56%), Positives = 568/769 (73%), Gaps = 38/769 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPY+ +Y EQ YM ELKRALDA+GHC+LEMPTGTGKT++LL+L+ +Y
Sbjct: 1 MKVDIDGLEVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLALVLAYK 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-AAKILAIGLSSRKNLCVNS 119
+ P KL+YCTRTV EM K + E+K L Y+T H G A++ A+ LSSR+N+CV+
Sbjct: 61 HAHP-TAGKLVYCTRTVPEMAKCVEEIKKLAQYRTAHYGADKAQLTAVCLSSRRNMCVHP 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRAL---------AAENP--------NIETCEFFENYE 162
RV+A + + VD CRK TASWVRA + + P +ETC F+ENY+
Sbjct: 120 RVMAHADGEDVDGQCRKMTASWVRARAAKAREAAASGDVPMDGGEQVREVETCSFYENYD 179
Query: 163 -KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+ + VLPPG+Y++ DL+ G ++GWCPYFL R++V FA+VVVY+YQY+LDPKV+ ++
Sbjct: 180 ARKSDDTVLPPGIYSVDDLKEIGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLV 239
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
S+ +KES+VVFDEAHNIDNVCIEALSV + R++L+ A+RNL+ ++ ++ + K D RL
Sbjct: 240 SRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKARL 299
Query: 282 RAEYNRLVEGL--------------ALRGNLPNA---WLSNPALPSDILKEAVPGNIRRA 324
AEY RLV+GL A N+ + ++NP LP D+L EA+PGNIRRA
Sbjct: 300 DAEYRRLVDGLRSSNAVVAPSYSDPATNRNIDTSNDIMIANPVLPDDVLDEAIPGNIRRA 359
Query: 325 EHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL 384
EHF+ +RRL++YLR R+ VE E P +F+ + ++ K ++FCY RL+SL+ TL
Sbjct: 360 EHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTL 419
Query: 385 EITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP 444
E+T+ +E+ + + DFATLV TY GF +IIEPFD + DPVLQLSC DASLA++P
Sbjct: 420 EVTNLEEYNALTDVADFATLVATYAEGFMLIIEPFDS-ASGVHDPVLQLSCLDASLAIRP 478
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVST 504
VF+RF SV+ITSGTLSPIDLYPRLLNF+PV+ S MS+ R ICP+V+TRGSDQ+PVST
Sbjct: 479 VFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVST 538
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
KFD+R D V RNYG LL+EM S PDG+VCFF SY YM++II W+ G+LK ++ KL
Sbjct: 539 KFDLRDDMSVVRNYGTLLLEMASCTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLSSKL 598
Query: 565 VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
+FIET+D+VETTLALDNY+KACDCGRGA+FFSVARGKVAEGIDFDRHYGR VI+FG+PFQ
Sbjct: 599 LFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQ 658
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 684
YTLS L ARLEYLR T QI+EGDFLTFDALRQAAQC GRV+RSK DYG++IFAD RY+R
Sbjct: 659 YTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNR 718
Query: 685 HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
DKR+KLP WI L D+HLNLS DMA+ +A+++L MAQP D++ ++
Sbjct: 719 ADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTNVN 767
>gi|422296028|gb|EKU23327.1| DNA excision repair protein ERCC-2, partial [Nannochloropsis
gaditana CCMP526]
Length = 937
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/760 (56%), Positives = 570/760 (75%), Gaps = 18/760 (2%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F L+ + ++FPYD +Y EQY+YMLELKRALDAKGHCLLEMPTGTGKT+ L+SLITSY +
Sbjct: 4 FDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFA 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-AAKILAIGLSSRKNLCVNSRV 121
PE KLIYCTRTV EM K + E++ + +Y+ + +G K+LA+ LSSR+NLC++ RV
Sbjct: 64 HPEVG-KLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERV 122
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLR 181
+ +R++VD+ACR TASWVR A + N+E C+++E YEK + A + G+Y+L DL+
Sbjct: 123 MEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLK 182
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
GK +GWCPYFLARH++ AN+++Y+YQY+LDPKVAG++SKE++ ES+VVFDEAHNIDN
Sbjct: 183 ELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDN 242
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP-- 299
VCIEALSV + ++L+ ATR L +++ E+ + K DA +L EY RLV GLA G L
Sbjct: 243 VCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGA 302
Query: 300 ----------NAWLSNPA--LPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
+A L+NP LP + +EAVPGNIRRAEHFL ++++V++L+ L ++
Sbjct: 303 AGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDST 362
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
+K+ P++F+ + ++ K LRF Y RL+SL+ TLE+T DEF +Q + DFATLV T
Sbjct: 363 QKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVAT 422
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF++I EP +P + PVLQLSC DASLA+KPVF+RF+SV+ITSGTLSP+DLYP
Sbjct: 423 YAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPT 482
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
LL+F PVV +S MS+ R ICP+V+T+GS Q ++T+F+ R DP V R+YG+LLVE+ +
Sbjct: 483 LLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIAT 542
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
VPDG+VCFF SYSYM+ ++ W D GIL++I++ KL+FIET+DVVETTLALDN+R+ACD
Sbjct: 543 HVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACD 602
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGA+F SVARGKVAEGIDFDRHYGR VI+ GVPFQYTLS ++ RLEYL+ F I
Sbjct: 603 SGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPS 662
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFLTFDA+RQAAQCVGRVIRSK DYG+MIFAD RY+R+DKR+KLP WIL + HL+LS
Sbjct: 663 DFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLS 722
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMT 747
T A+ R FL++MAQP D G +K LL + + ++T
Sbjct: 723 TGDAMDKVRRFLKEMAQPMD--GKELQKILLDETRIAELT 760
>gi|198412602|ref|XP_002126055.1| PREDICTED: similar to ERCC2/XPD gene product [Ciona intestinalis]
Length = 760
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/759 (54%), Positives = 551/759 (72%), Gaps = 3/759 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQYSYMLELKR LDAKGH +LEMP+GTGKT LLSLI +Y
Sbjct: 1 MKINVDGLLVYFPYEFIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTATLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RTV E+EK L EL+ L Y + +G K+ A+ LSSRKNLC+N+
Sbjct: 61 YEYPEIISKLIYCSRTVPEIEKVLEELRRLMEYYEKEVGEVPKLCALALSSRKNLCINAS 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V A VD C + TAS VR + ++E C F+E ++ LP GVY L DL
Sbjct: 121 VRGARIGKEVDTKCHQLTASHVRIKQKHDASVELCSFYEQFDANGREEALPAGVYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
R +GK + WCPYFLAR+ + AN+VVYSY YLLDPK+A ++SKE+ K +VVVFDEAHNID
Sbjct: 181 RRYGKLRNWCPYFLARYTITHANIVVYSYHYLLDPKIADLVSKELSKNAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ ++N+ + +E+ + TD +LR EY RLVEGL A
Sbjct: 241 NVCIDSMSVTISRRTLDKCSQNIQSLQNHLEKSRQTDEDKLRNEYKRLVEGLREANIARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP +P D+LKE+VPGNIR AEHFL ++R +YL+ RL +V E P+SF+
Sbjct: 301 ADVVLANPVIPDDVLKESVPGNIRNAEHFLAFMKRFNEYLKSRLRVRHVVSETPLSFIHD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
ID+K LRFC ERL SL+ TLE+ + +F ++ + +FA+LV TY +GF ++IEP
Sbjct: 361 AFEQVCIDKKPLRFCSERLRSLLQTLELANMSDFSNLTLLANFASLVSTYNKGFVVLIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DAS+A+KPVF RFQSV+ITSGTLSP+D+YPR+L+FHPV +
Sbjct: 421 FDDRTPTIVNPILHFSCMDASVAIKPVFSRFQSVIITSGTLSPLDMYPRILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CP+V+T G+DQ+ +S+KF+ R D V RNYG LLVEM IVPDGIVCFFV
Sbjct: 481 FTMTLARQCLCPVVVTHGNDQVAISSKFETREDVAVIRNYGNLLVEMTKIVPDGIVCFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY+YM+ I+A+W + GIL+ + ++KL+FIETQD ET++ALD Y++AC+ GRGAV SVA
Sbjct: 541 SYAYMENIVASWYEQGILENVQKNKLLFIETQDAAETSMALDKYQEACENGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF H+GR VIMFG+P+ YT S+IL ARLEYLR+ +QI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFTHHHGRAVIMFGIPYVYTQSRILKARLEYLRENYQIRESDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRVIR K DYG+M+FADKR++R DK+ KLP WI HL D NLSTD ++HI + F
Sbjct: 661 AQCVGRVIRGKTDYGVMVFADKRFARSDKKGKLPRWIQEHLSDGVCNLSTDESVHITKRF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY 757
LR MAQP+ + +G +LL++ LE G I ++ +
Sbjct: 721 LRIMAQPFSQEDQLGL-SLLTREQLESEAMRGRIQQIAH 758
>gi|348537926|ref|XP_003456443.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oreochromis niloticus]
Length = 760
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/749 (56%), Positives = 549/749 (73%), Gaps = 3/749 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +E + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L + T+ G + LA+ LSSRKNLC++
Sbjct: 61 RAFPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYTKETGESNNFLALALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C TAS++RA NPN+ C F+E ++ LP G+Y L DL
Sbjct: 121 VSSLRFGKEVDGKCHSLTASYIRAQHHSNPNLPVCRFYEEFDSVGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+AFG+++GWCPY+LAR+ + AN+VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KAFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ N+ + I + K TDA +LR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNITRRTLDRCQNNVDTLQNTIHKIKETDAAKLREEYRRLVEGLKEANVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +L+NP LP +IL+EAVPG+IR AEHF+ +RR ++YL+ RL ++V +E F+
Sbjct: 301 TDIYLANPVLPDEILQEAVPGSIRTAEHFVGFMRRFLEYLKSRLRVQHVVQESAPQFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I ID+K LRFC ERL SL+ TLEI D +F + I +FATLV TY++GF+IIIEP
Sbjct: 361 IFDKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F++R P I +PVL SC D S+A+KPVF RFQSVVITSGTLSP+D+YPR+L+F PV S
Sbjct: 421 FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPRILDFRPVTMAS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CP+++ RG+DQ+ +S+KF+ R D V RNYG LL+EM +IVPDGIV FF
Sbjct: 481 FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ I+A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYVYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR V+MFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVLMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKRY+R DKR KLP WI H+ D LNL+ D A+ +++ F
Sbjct: 661 AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHINDGSLNLTVDEAVQLSKHF 720
Query: 719 LRKMAQPYDKAGSIGRKTL-LSQADLEKM 746
LR+MAQP+ + +G L L Q + E+M
Sbjct: 721 LRQMAQPFRQEDQLGLSLLTLEQLESEEM 749
>gi|449018319|dbj|BAM81721.1| DNA excision repair protein ERCC2/XPD [Cyanidioschyzon merolae
strain 10D]
Length = 782
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/774 (54%), Positives = 572/774 (73%), Gaps = 23/774 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIF +E+V VYFPYD +YPEQY+YM ELKRALD+ GHC+LEMPTGTGKT+ LLS ITSY
Sbjct: 1 MIFNVENVKVYFPYDYVYPEQYAYMRELKRALDSNGHCILEMPTGTGKTVTLLSFITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK------ILAIGLSSRKN 114
L+ E KLIYCTRTV E+EK L+EL+++ Y+ L A K +LA+GL++R+N
Sbjct: 61 LAHREVR-KLIYCTRTVGELEKVLSELEVVIRYRDAQLEKAGKRDQAAAVLAVGLTTRRN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVR-------ALAAENPNIET-----CEFFENYE 162
LC+ S V AE+R+ D+ CR TASWVR A +NP++E C+F+E Y
Sbjct: 120 LCLQSAVSKAESREEADSLCRSLTASWVRESHSAAIARFEKNPDLEDLPTTLCQFYEGYR 179
Query: 163 KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIIS 222
+ + A+LP G+YTL+ + G+++GWCPY+ RH + FANV+VY+YQYLLDPK+AG+IS
Sbjct: 180 REGNDAILPSGIYTLEKVLQIGRERGWCPYYTVRHTMNFANVIVYNYQYLLDPKIAGLIS 239
Query: 223 KEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
+E+ +E +VVFDEAHNIDNVCI+ALSVS+R L A N+ + I+ + D RL
Sbjct: 240 RELSRECIVVFDEAHNIDNVCIDALSVSLRLDDLRRAQANVVSLRNRIQEIRTHDERRLL 299
Query: 283 AEYNRLVEGLALRGNLPNAWL-SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
EY R+++G+ ++ + ++P +P D+L+E +PGNIRR EHFL L RL+ + R R
Sbjct: 300 EEYRRILQGIRRPADVDAFTIEASPVIPEDVLQETIPGNIRRGEHFLLFLLRLIDFFRQR 359
Query: 342 LETENVEKEGPVSFVASITAHAGI-DQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
+ + V ++ P +F+ ++ I D K LRFC +RL SL+ TLEI++ +F+ +Q +
Sbjct: 360 MRSTQVTQDTPRNFLHALMPSVQIPDSKPLRFCSDRLASLLQTLEISNVRDFVSLQKLAH 419
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
FATL+GTY++GFS+I+EP+DER P++PDPVLQLSC DAS+ ++P+F RFQSV++TSGT+S
Sbjct: 420 FATLLGTYSQGFSVIMEPYDERAPNVPDPVLQLSCLDASIGMRPIFTRFQSVILTSGTIS 479
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGK 520
P+DLY R+L F P V+ S +SL R ICPMV+ RGSDQ+ +S+K+D R DP V RNYG
Sbjct: 480 PLDLYARILGFRPAVAHSLNISLHRASICPMVIARGSDQIAISSKYDSRRDPSVIRNYGA 539
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALD 580
LLVE+ S+VPDG+V FF SY Y++ ++ W+ GI++++++HKLVFIET D+ E+++AL+
Sbjct: 540 LLVELASVVPDGVVGFFTSYIYLESVVQMWHQMGIIQKLLEHKLVFIETPDIFESSVALE 599
Query: 581 NYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD 640
NYR+ACD GRGA+F VARGKVAEGIDFDRHYGR V++ GVPFQYT S++L ARLE+LR+
Sbjct: 600 NYRRACDSGRGAIFLCVARGKVAEGIDFDRHYGRCVVIIGVPFQYTESRVLRARLEFLRE 659
Query: 641 TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
QI+EGDFLTFDA+RQAAQC+GRVIRSK DYG+MI AD+RY+R RSKLP WI SHL
Sbjct: 660 HLQIREGDFLTFDAMRQAAQCMGRVIRSKVDYGLMILADRRYNRAQNRSKLPLWIQSHLD 719
Query: 701 DAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINE 754
+ ++LSTDMAL I +EFL +MAQP D+ IG TLL + DL+ D S +E
Sbjct: 720 EGKVDLSTDMALGIIQEFLIRMAQPLDRKEMIG-TTLLREIDLQA-PGDTSFSE 771
>gi|224001022|ref|XP_002290183.1| nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana
CCMP1335]
gi|220973605|gb|EED91935.1| nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana
CCMP1335]
Length = 770
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/765 (56%), Positives = 557/765 (72%), Gaps = 21/765 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F LE + V+FPYD IY EQY YM LK+ LDA GHCLLEMPTGTGKT+ LLSLITSY
Sbjct: 1 MRFNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L+ P N KL+YCTRTV EM + EL + Y++ LG + +LA+ LSSR+N+C++ R
Sbjct: 61 LANP-NCGKLVYCTRTVPEMNSVMEELGTVLAYRSEQLGAGSGVLALCLSSRRNMCIHER 119
Query: 121 VLAAENRDSVDAACRKRTASWV--RALAAENPN----IETCEFFENYEKAASAAVLPPGV 174
VL +R+ +DAACR TA W +A A +ETCE+++ ++ A A +P GV
Sbjct: 120 VLRESDREGIDAACRSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGV 179
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
Y L++LR +GK + WCPY+L R + A+V+V++YQY+LDPKVA ++SKE++ ES++VFD
Sbjct: 180 YDLEELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFD 239
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL 294
EAHNID+VCIEALSV + + LE ATR+L R++ E+ R KA+D RL+AEY LV GL
Sbjct: 240 EAHNIDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNLVNGLVD 299
Query: 295 RGNL--PNA--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLET-----E 345
+G L P A LS+ L D++ EAVPGNIRRAEHF+ ++++V++L+ RL
Sbjct: 300 QGLLDAPAAAVGLSSNVLSPDVINEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRG 359
Query: 346 NVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLV 405
V E P++F+ + ++ K L+F Y RL SL+ TL++ + D+F + + DFA+LV
Sbjct: 360 GVISETPLAFLHRMITTTSLEAKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASLV 419
Query: 406 GTYTRG---FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
TY G F+II+EP +P DPV+QL+C DASLA+ P+F RF SVVITSGTLSPI
Sbjct: 420 ATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSVVITSGTLSPI 479
Query: 463 DLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLL 522
DLYP+LL F P VS SF MS R CI P+V+TRGSDQLPVSTKFD R D GV RNYG +L
Sbjct: 480 DLYPKLLQFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRDDMGVVRNYGSML 539
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY 582
VE+ S +PDG+V FF SYSYM+ II+ W+ GIL+++ + KLVFIET+DVVETTLALDNY
Sbjct: 540 VELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNY 599
Query: 583 RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF 642
R+ACD GRGAVF SVARGKV+EGI+FDRHYGR VIMFGVPFQYTLS IL ARLEYL+ +
Sbjct: 600 RRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHY 659
Query: 643 QIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA 702
QI+E DFL FDALRQA+QCVGRVIRSK DYG+MIFAD RY+RHDKRSKLP WIL L D
Sbjct: 660 QIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDG 719
Query: 703 HLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMT 747
LNLSTD A+ + FLR MAQP D+ ++ LL+ +++ M+
Sbjct: 720 QLNLSTDTAIAQVKHFLRVMAQPVDQNAL--KEVLLTLDEVQAMS 762
>gi|56118508|ref|NP_001008131.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Xenopus (Silurana) tropicalis]
gi|51703768|gb|AAH81339.1| ercc2 protein [Xenopus (Silurana) tropicalis]
Length = 760
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/749 (56%), Positives = 545/749 (72%), Gaps = 3/749 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQYSYMLELKR LDAKGH +LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKLNIDGLLVYFPYEYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L Y G +A+ LSSR+NLCVN
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVVEELRKLIEYTQAQTGGTLNFMALALSSRRNLCVNPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V A +D C TAS+VR+ +P ++TC FFE ++ LPPG+Y L DL
Sbjct: 121 VSALRFGKEIDGRCHSLTASFVRSQKQRDPTVQTCRFFEEFDAIGRETPLPPGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
R G+Q+GWCPY+LARH + NVVVYSY YLLDPK+A ++S+E+ K+SVVVFDEAHNID
Sbjct: 181 RTLGRQKGWCPYYLARHALGQCNVVVYSYHYLLDPKIADLVSRELSKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TLE N+ +N IE+ K TD +L+ EY +LVEGL A
Sbjct: 241 NVCIDSMSVTITRRTLERCQTNIETLNTAIEKIKETDEKKLKEEYAQLVEGLREASVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +LSNP LP +IL+EAVPG IR A HFL LRRLV Y++ RL +V +EGP +F+
Sbjct: 301 TDVYLSNPVLPDEILQEAVPGCIRNALHFLGFLRRLVGYIKSRLRAGHVTQEGPAAFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K +RFC ERL SL TLEI D + + I +FATLV TYT+GF IIIEP
Sbjct: 361 LYEKVCIERKPMRFCAERLRSLTRTLEIADITDLSPLTLITNFATLVSTYTKGFMIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F++R P I +PVL SC D+SLA+KPVF RFQSV+ITSGTLSP+D+YP++L+F PV +
Sbjct: 421 FEDRTPSISNPVLHFSCLDSSLAIKPVFQRFQSVIITSGTLSPLDIYPKILDFRPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPMV+ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMVVGRGNDQVAMSSKFETREDLAVMRNYGNLLLEMSAVVPDGIVGFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ I+A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYLYMENIVASWYEQGILENIQRNKLIFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARL++LRD F ++E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLQFLRDQFHLRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKRY+R DKR KLP WI HL DA+LNL+ D ++H+AR F
Sbjct: 661 AQCVGRAIRGKTDYGIMLFADKRYARSDKRGKLPLWIQEHLTDANLNLTLDESVHLARHF 720
Query: 719 LRKMAQPYDKAGSIGRKTL-LSQADLEKM 746
LR+MAQP+ + +G L L Q E+M
Sbjct: 721 LRQMAQPFRREDQLGLSLLTLEQLQSEEM 749
>gi|347365666|gb|AEO89688.1| ercc2 [Danio rerio]
Length = 760
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/757 (54%), Positives = 550/757 (72%), Gaps = 6/757 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KL+YC+RTV E+EK + EL+ L +Y ++ G LA+ LSSRKNLC++
Sbjct: 61 KTYPLEVTKLVYCSRTVPEIEKVVEELRKLMDYYSKQTGVKNDFLALALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C TAS++RA NPN C+F+E ++ +PPG+Y L DL
Sbjct: 121 VSSLRFGKEVDGKCHSLTASYIRAQHQSNPNQPVCQFYEEFDNVGRQVPIPPGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++GWCPYFLAR+ + AN+VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KDFGRRKGWCPYFLARYALLHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ N+ + I R K TDA +LR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNITRRTLDRCQTNVETLQNTISRIKETDAAKLREEYRRLVEGLKEANVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +LSNP LP +IL+EAVPG+IR AEHF+ ++R ++YL+ RL +V +E F+
Sbjct: 301 TDIYLSNPVLPDEILQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I ID+K LRFC ERL SL+ TLEI D +F I I FATLV TY++GF+IIIEP
Sbjct: 361 IFEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSPITLISHFATLVSTYSKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+++ P I +PVL SC D S+A+KPVF RFQ+V+ITSGTLSP+D+YPR+L+F PV S
Sbjct: 421 FEDKTPTIANPVLHFSCMDPSIAIKPVFGRFQTVIITSGTLSPLDIYPRILDFRPVTMAS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CP+++ RG+DQ+ +++KF+ R D V RNYG LL+EM +IVPDGIV FF
Sbjct: 481 FTMTLARTCLCPLIVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ I+A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYMYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF H+GR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKRY+R DKR KLP WI HL D LNL+ D + +++ F
Sbjct: 661 AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHLTDGSLNLTIDETVQLSKHF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEM 755
LR+MAQP+ + +G LS LE++ ++ + ++
Sbjct: 721 LRQMAQPFRREDQLG----LSLLTLEQLQSEDMLQKI 753
>gi|410910536|ref|XP_003968746.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Takifugu rubripes]
Length = 760
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/750 (55%), Positives = 547/750 (72%), Gaps = 5/750 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MRLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L Y + G + LA+ LSSRKNLC++
Sbjct: 61 KAFPLEVTKLIYCSRTVPEIEKVVEELRKLLEYHAKQTGQSNNFLALALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V A VD C TAS++RA +PN+ C +FE+++ LP G+Y L DL
Sbjct: 121 VSALRFGKEVDGKCHSLTASYIRAQRHSDPNVPVCRYFEDFDAVGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++GWCPY+LAR+ + AN+VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP- 299
NVCI+++SV++ R+TL+ N+ + + I + K TDA +L+ EY RLVEGL N+
Sbjct: 241 NVCIDSMSVNITRRTLDRCQGNVDTLQKTIHKIKDTDAAKLKEEYRRLVEGLK-EANIAR 299
Query: 300 --NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+ +LSNP LP +IL+EAVPG IR AEHF+ L+R ++YL+ RL ++V +E F+
Sbjct: 300 ETDVYLSNPVLPDEILREAVPGTIRTAEHFVGFLKRFLEYLKSRLRVQHVVQESTPQFLK 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
I ID+K LRFC ERL SL+ TLEI D +F + I +FATLV TY++GF+IIIE
Sbjct: 360 DIFEKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLIANFATLVSTYSQGFTIIIE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
PF++R P I +PVL SC D S+A+KPVF RFQSVVITSGTLSP+D+YP++L+F PV
Sbjct: 420 PFEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPKILDFRPVTMA 479
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF M+L R C+CP+++ RG+DQ+ +S+KF+ R D V RNYG LL+EM +IVPDGIV FF
Sbjct: 480 SFTMTLARTCLCPLIIGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFF 539
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+ I+A+W + GIL+ I ++KL+FIET D ET++AL+ Y++AC+ GRGA+ SV
Sbjct: 540 TSYVYMENIVASWYEQGILENIQKNKLIFIETPDAAETSMALEKYQEACENGRGAILLSV 599
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDF H+GR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R
Sbjct: 600 ARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDHFQIRENDFLTFDAMRH 659
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AAQCVGR IR K DYG+MIFADKRY+R DKR KLP WI H+ D LNL+ D + +++
Sbjct: 660 AAQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHISDGSLNLTIDETIQLSKH 719
Query: 718 FLRKMAQPYDKAGSIGRKTL-LSQADLEKM 746
FLR+MAQP+ + +G L L Q + E+M
Sbjct: 720 FLRQMAQPFRQEDQLGLSLLTLEQLESEEM 749
>gi|213511929|ref|NP_001133411.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
gi|209153902|gb|ACI33183.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 760
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/757 (54%), Positives = 552/757 (72%), Gaps = 6/757 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +E + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P KLIYC+RTV E+EK + EL+ L + ++ G ILA+ LSSRKNLCV+
Sbjct: 61 REYPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYSKETGEKNNILALALSSRKNLCVHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C TAS++RA NP++ +C F+E ++ LP GVY L DL
Sbjct: 121 VSSLRFGKEVDGKCHSLTASYIRAQRQSNPSLPSCRFYEEFDAMGKQVPLPAGVYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++GWCPY+LAR+ + AN++VYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KDFGRRKGWCPYYLARYSILHANIIVYSYHYLLDPKIADLVSKELSKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ + N+ + I + K TDA +L+ EY RLVEGL A
Sbjct: 241 NVCIDSMSVNITRRTLDRSQANVETLQNTILKIKETDAAKLKEEYRRLVEGLKEANVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP +IL+EAVPG+IR AEHF+ ++R ++YL+ RL +V +E F+
Sbjct: 301 TDIYMSNPVLPDEILQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I ID+K LRFC ERL SL+ TLEI D +F I I +FATLV TY++GF+IIIEP
Sbjct: 361 IFEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSAITLISNFATLVSTYSKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F++R P I +PVL SC D S+A+KPVF+RFQSV+ITSGTLSP+D+YPR+L+F PV S
Sbjct: 421 FEDRTPTIANPVLHFSCMDPSIAIKPVFERFQSVIITSGTLSPLDIYPRILDFRPVTVAS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CP+V+ RG+DQ+ +++KF+ R D V RNYG LL+EM +IVPDGIV FF
Sbjct: 481 FTMTLARTCLCPLVVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY+YM+ I+A+W + GIL+ + ++KL+FIET D ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYTYMENIVASWYEQGILENVQRNKLIFIETPDAAETSMALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF H+GR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKRY+R DKR KLP WI HL D LNL+ D + +++ F
Sbjct: 661 AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHLTDGSLNLTIDETVQLSKHF 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEM 755
LR+MAQP+ + +G LS LE++ ++ + ++
Sbjct: 721 LRQMAQPFRQEDQLG----LSLLTLEQLQSEDMLQKI 753
>gi|156400058|ref|XP_001638817.1| predicted protein [Nematostella vectensis]
gi|156225941|gb|EDO46754.1| predicted protein [Nematostella vectensis]
Length = 735
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/711 (57%), Positives = 534/711 (75%), Gaps = 2/711 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
MLELKR LDAKGHCLLEMP+GTGKT++LLSLI +Y+ +KP KLIYC+RTV E+EK +
Sbjct: 1 MLELKRTLDAKGHCLLEMPSGTGKTVSLLSLIVAYLKNKPLELTKLIYCSRTVPEIEKVM 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
ELK L Y G ILA+ LSSRKNLC++ V VD C TAS+VR
Sbjct: 61 EELKKLTEYYESETGEKPNILALALSSRKNLCIHPEVAGEREGKKVDGKCLSMTASFVRL 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
E+ ++ C F+E+++ +PPG Y L DLR FG+++GWCPYFLAR + ANV
Sbjct: 121 KHKEDSSVPVCNFYEDFDSLGRDEKMPPGSYNLDDLRQFGRKKGWCPYFLARRAIYHANV 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
+VYSY Y+LDPK+A ++SKE+ K++VVVFDEAHNIDNVCI+++SV++ R+TL+ + N+
Sbjct: 181 IVYSYHYMLDPKIADLVSKELDKKAVVVFDEAHNIDNVCIDSMSVTISRRTLDRSHANVE 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ I+R KATDA +LR EYNRLVEGL A + LSNP LP ++L+E+VPGNIR
Sbjct: 241 SLASVIDRIKATDAQKLREEYNRLVEGLRQASEARDTDIVLSNPVLPDEVLQESVPGNIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
+AEHF+ +RR ++YL+ RL ++V +E P+SF+ I I++K LRFC ERL SL+
Sbjct: 301 KAEHFVGFMRRFIEYLKTRLRIQHVVQESPMSFLQHIYQQVCIERKPLRFCAERLSSLLR 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEI + ++ + I +FATLV TY +GF+IIIEPFD+R P IP+P+L SC DAS+AV
Sbjct: 361 TLEIPEMQDYGPLVLIANFATLVSTYNKGFNIIIEPFDDRTPTIPNPILHFSCMDASIAV 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRFQSVVITSGTLSPID+YP++L+F PV +F M+L R C+CPM+++RGSDQ+ +
Sbjct: 421 KPVFDRFQSVVITSGTLSPIDMYPKILDFRPVTMATFTMTLARTCLCPMIVSRGSDQVAM 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+TKF+MR D V RNYG LL EM ++VPDGIVCFF SY YM+ +++ W+D GI+ I ++
Sbjct: 481 TTKFEMREDLAVIRNYGNLLTEMSAVVPDGIVCFFTSYLYMESVVSLWHDQGIISNIQKN 540
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIET D ET+LAL NY+KAC+ GRGA+ SVARGKV+EGIDFD HYGR VIMFG+P
Sbjct: 541 KLLFIETTDAAETSLALHNYQKACENGRGAILLSVARGKVSEGIDFDHHYGRAVIMFGIP 600
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARLEYLR+ F I+E DFLTFDA+R AAQCVGR IR K DYG+M+FADKR+
Sbjct: 601 YVYTQSRILKARLEYLREQFNIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFADKRF 660
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
S+ DKR KLP WI +L+++ NLSTD ++ IA+ FLR+MAQP+++ +G
Sbjct: 661 SKVDKRGKLPKWIQEYLKESLCNLSTDESVQIAKRFLRQMAQPFEREDQLG 711
>gi|604371|gb|AAA85822.1| ERCC2/XPD [Xiphophorus maculatus]
Length = 760
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/749 (55%), Positives = 544/749 (72%), Gaps = 3/749 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +E + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P + KLIYC+RTV E+EK + EL+ L + + G LA+ LSSRKNLC++
Sbjct: 61 RAFPLDVTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGEVNNFLALSLSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C TAS++RA NPN C F+E ++ LP G+Y L DL
Sbjct: 121 VSSLRFGKEVDGKCHSLTASYIRAQRHSNPNQPVCRFYEEFDAVGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++GWCPY+LAR+ + AN+VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+T++ N+ + I + K TDA +LR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNITRRTVDRCQNNVDTLQNTIHKIKETDAAKLREEYRRLVEGLKEANVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +L+NP LP ++L+EAVPG+IR AEHF+ LRR ++YL+ RL ++V +E F+
Sbjct: 301 TDIYLANPVLPDEVLQEAVPGSIRTAEHFVGFLRRFLEYLKARLRVQHVVQESAPQFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I ID+K LRFC ERL L+ TLEI D +F + I +FATLV TY++GF+IIIEP
Sbjct: 361 IFDKVCIDRKPLRFCAERLQCLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F++R P I +PVL SC D S+A+KPVF RFQSV+ITSGTLSP+D+YPR+L+F PV S
Sbjct: 421 FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRILDFRPVTMAS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CP+++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ I+A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYVYMENIVASWYEQGILENIQKNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF H+GR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GR IR K DYG+MIFADKRY+R DKR KLP WI H+ D LNL+ D A+ +++ F
Sbjct: 661 AQCLGRAIRGKTDYGLMIFADKRYARSDKRGKLPRWIQEHINDGSLNLTVDEAVQLSKHF 720
Query: 719 LRKMAQPYDKAGSIGRKTL-LSQADLEKM 746
LR+MAQP+ + +G L L Q E+M
Sbjct: 721 LRQMAQPFRQEDQLGLSLLTLEQLQSEEM 749
>gi|260830571|ref|XP_002610234.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
gi|229295598|gb|EEN66244.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
Length = 763
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/749 (53%), Positives = 555/749 (74%), Gaps = 3/749 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPYD IYPEQYSYM+ELKR+LDAKGHC+LEMP+GTGKT++LLSLI +Y+
Sbjct: 1 MKINIDGLLVLFPYDYIYPEQYSYMVELKRSLDAKGHCVLEMPSGTGKTVSLLSLIVAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P++ KLIYC+RTV E+EK L EL+ L Y + G ++ + LSSRKNLC++
Sbjct: 61 KTSPKDVCKLIYCSRTVPEIEKVLEELRKLMEYYEKETGEPPNLIGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C + TAS+VR+ +P++ C+F+E ++ +LPPG+Y L D+
Sbjct: 121 VSTLQFGKEVDGRCHQMTASFVRSRHERDPDVPVCDFYERFDALGRETLLPPGIYNLDDM 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ G+++G+CPYF+AR+ + +AN+VVYSY YLLDPK+A ++SKE+ K SVVVFDEAHNID
Sbjct: 181 KDVGREKGYCPYFMARYAITYANIVVYSYHYLLDPKIADLVSKELAKNSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+ L+ N+ + + ++R K TD RLR EY+RLVEGL A
Sbjct: 241 NVCIDSMSVTINRRMLDRCQTNVEALTRTVQRLKDTDQQRLRQEYSRLVEGLREANVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ LSNP LP ++L+EAVPGNIR AEHF+ ++R ++YL+ RL ++V +E P SF+
Sbjct: 301 TDVVLSNPVLPDEVLQEAVPGNIRTAEHFVGFMKRFLEYLKSRLRIQHVVQETPASFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ +D+K LRFC ERL+SL+ TLEI D +F + + +FATLV TY +GF++I+EP
Sbjct: 361 LKEKVCLDRKPLRFCSERLNSLIRTLEIADLTDFSPLILLANFATLVSTYMKGFTLIMEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DAS+A+KPVFDRFQSVVITSGTLSP+D+YP++L+F PV S
Sbjct: 421 FDDRTPTISNPILNFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMYPKILDFRPVNMAS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R CICPM++ RG+DQ+ +++KF+ R D + RNYG LLV+M ++VPDGIV FF
Sbjct: 481 FTMTLARPCICPMIVGRGNDQVTMTSKFESREDVAIIRNYGNLLVDMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYM+ +A W + GI++ + ++KL+FIETQ ET++AL Y++AC+ GRGA+ SVA
Sbjct: 541 SYSYMESTVAAWYEQGIIENVQRNKLLFIETQSAAETSVALQKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF+ H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFEHHLGRAVVMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGRV+R K DYG+M+FADKR++R DKR KLP WI +L D NL+TD A+ ++++F
Sbjct: 661 AQCVGRVLRGKTDYGVMVFADKRFARSDKRGKLPKWIQEYLSDGMCNLTTDEAVQVSKKF 720
Query: 719 LRKMAQPYDKAGSIGRKTL-LSQADLEKM 746
LR+MAQP+ + +G L L Q E+M
Sbjct: 721 LRQMAQPFRREDQLGLSLLTLEQLQTEEM 749
>gi|383850774|ref|XP_003700951.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Megachile rotundata]
Length = 759
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/747 (54%), Positives = 546/747 (73%), Gaps = 3/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MI ++ + VYFPYD IYPEQY+YMLELKRALDAKGHCLLEMP+GTGKTI LLSLI +Y+
Sbjct: 1 MIISVDGLLVYFPYDYIYPEQYAYMLELKRALDAKGHCLLEMPSGTGKTITLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P + KLIYC+RTV E+EK + ELK L +Y + G KI+ + LSSRKN+C++
Sbjct: 61 LENPLDITKLIYCSRTVPEIEKVIEELKKLMDYYEKETGSKPKIVGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VR + + C F+E ++ ++PPG+Y++ DL
Sbjct: 121 VSREREGKIVDGRCHALTASYVRERHNYDESTPICNFYEGFDMEGKEQLMPPGIYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR + A +VVYSY YLLDPK+A +SKE+ K SVVVFDEAHNID
Sbjct: 181 KDYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAESVSKELSKSSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+ LE ++ N+ + + + + D +L+ EY+RLVEGL A
Sbjct: 241 NVCIDSMSVKINRRILEKSSANIQLLEKTVAEMREDDVNKLKEEYDRLVEGLKDARVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP ++L+E +PGNIR AEHF+ L+R V+YL+ RL ++V +E P +F+
Sbjct: 301 TDIILANPVLPDEVLQEVIPGNIRNAEHFICFLKRFVEYLKTRLRVQHVVQESPAAFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ A I++K LRFC ERL S + T+EITD +F I + ATLV TYT+GF+II+EP
Sbjct: 361 VQAKVSIERKLLRFCAERLGSFLRTMEITDLTDFSPIILVTHLATLVSTYTKGFTIIVEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+KP+FDRFQSVVITSGTLSP+D+YP++LNFHPV+ S
Sbjct: 421 FDDKSPTVLNPILHFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++ +G+DQ+ +S+K++ R D V RNYG+LLVE + VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVAKGNDQVTISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ ++A W D G++ ++ +HKL+FIETQD ET+LAL NY KAC+ GRGAV SVA
Sbjct: 541 SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR+SR DKRSKLP WI HL D NLST+ A+ I++ +
Sbjct: 661 AQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLTDNLCNLSTEEAVQISKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR+MAQP+ + +G +LL++ LEK
Sbjct: 721 LRQMAQPFTRENQLGL-SLLTREQLEK 746
>gi|157132567|ref|XP_001656074.1| DNA repair helicase rad3/xp-d [Aedes aegypti]
gi|108884369|gb|EAT48594.1| AAEL000404-PA [Aedes aegypti]
Length = 760
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/751 (54%), Positives = 545/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR DAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MRISVDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYI 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK +AELK L NY + G I + LSSRKN+C++S
Sbjct: 61 MENPHIVRKLIYCSRTVPEIEKVIAELKHLMNYYEKQTGVMPNITGLVLSSRKNMCIHSE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VDA C TAS+VR A + ++ C+++E ++ + LPPGVY++ DL
Sbjct: 121 VSKERDGKIVDAKCYGMTASYVRERATTDDSVAVCQYYEGFQAEGKESTLPPGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++ WCPYFL+R + A+VVVYSY YLLDPK+A ++SKE+ KESVVV DEAHNID
Sbjct: 181 KDFGRERNWCPYFLSRFAINQAHVVVYSYHYLLDPKIAEVVSKELAKESVVVCDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVC++++SV + R+ +E +T + + + + K D RL EY RLV+GL A
Sbjct: 241 NVCVDSMSVKINRRLIEKSTTGVHTLEKYVAEMKEDDRKRLNDEYLRLVQGLKDASFARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP++ILKE VPGNIR A+HFL L+R ++Y++ RL ++V +E P F+
Sbjct: 301 TDMVLANPVLPTEILKEVVPGNIRNADHFLSFLKRFIEYIKSRLRVQHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I I++K LRFC ERL SL+ TLEITD EF + I FATLV TYT+GF+IIIEP
Sbjct: 361 IQQKVCIERKPLRFCAERLSSLLRTLEITDLTEFGPLTVITSFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L LSC D+S+A+KP+F RFQSVVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILHLSCMDSSIAMKPIFQRFQSVVITSGTLSPMDMYPKILDFEPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM+++RG+DQ+ +S+KF+ R D V RNYG+LLVE VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSRGNDQVAISSKFETREDTAVTRNYGQLLVETAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KAC+CGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIIDTLLRYKLLFIETQDNAETSYALMNYVKACECGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RG+V+EG+DFD H GR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDALR A
Sbjct: 601 RGRVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDALRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKR+ R DKR KLP WI HL D NLST+ A+ +A+ +
Sbjct: 661 AQCVGRAIRGKTDYGIMIFADKRFGRQDKRGKLPKWIQEHLTDNLTNLSTEEAMQLAKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ L+ M +
Sbjct: 721 LRQMAQPFTREDQLG-VSLLTLEQLQSMEKE 750
>gi|332026203|gb|EGI66345.1| TFIIH basal transcription factor complex helicase subunit
[Acromyrmex echinatior]
Length = 774
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/743 (54%), Positives = 544/743 (73%), Gaps = 3/743 (0%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ + VYFPYD IYPEQY+YMLELKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+L P
Sbjct: 20 VDGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYMLEHP 79
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
+ KLIYC+RTV E+EK + ELK L +Y + KI+ + LSSRKN+C++ V
Sbjct: 80 LDVTKLIYCSRTVPEIEKVIEELKKLIDYYEKETKSKPKIVGLVLSSRKNMCIHPEVSRE 139
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
VD C TAS+VR + + C F+E ++ ++PPG+Y++ DL+ +G
Sbjct: 140 REGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGREQIMPPGIYSIDDLKEYG 199
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
K + WCPYFLAR + A +VVYSY YLLDPK+A +SKE+ + SVV+FDEAHNIDNVCI
Sbjct: 200 KDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSRSSVVIFDEAHNIDNVCI 259
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAW 302
+++SV + R+T+E +T N+ + + + + D +L+ EY RLVEGL A +
Sbjct: 260 DSMSVKINRKTMEKSTANIQLLEKTVAEMRQEDVNKLKEEYERLVEGLRDAQFQRETDVI 319
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
L+NP LP++IL+E +PGNIR AEHF+ L+R V+YL+ RL ++V +E P +F+ I A
Sbjct: 320 LANPILPNEILEEVIPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQESPAAFLKDIQAK 379
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER 422
I++K LRFC +RL SL+ T+EITD +F I + ATLV TYT GF+II+EPFD++
Sbjct: 380 VAIERKPLRFCAQRLASLLRTMEITDLTDFSPIILVTHLATLVSTYTHGFTIIVEPFDDK 439
Query: 423 MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
P + +P+L SC D+S+A+KP+FDRFQSVVITSGTLSP+D+YP++LNFHPV+ SF M+
Sbjct: 440 TPTVLNPILHFSCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKVLNFHPVIMSSFTMT 499
Query: 483 LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSY 542
L R C+ PM++ +G+DQ+ +S+K++ R D V RNYG+LLVE + VPDG+VCFF SY Y
Sbjct: 500 LARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLY 559
Query: 543 MDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKV 602
M+ ++A W D G++ ++ +HKL+FIETQD ET+LAL NY KAC+ GRGAV SVARGKV
Sbjct: 560 MESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVARGKV 619
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCV 662
+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCV
Sbjct: 620 SEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCV 679
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
GR IR K DYG+M+FADKR+SR DKRSKLP WI HL D+ NLST+ A+ I++ +LR+M
Sbjct: 680 GRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLNDSLCNLSTEEAIQISKRWLRQM 739
Query: 723 AQPYDKAGSIGRKTLLSQADLEK 745
AQP+ + +G +LL++ LEK
Sbjct: 740 AQPFTRENQLGL-SLLTREQLEK 761
>gi|307182232|gb|EFN69563.1| TFIIH basal transcription factor complex helicase subunit
[Camponotus floridanus]
Length = 759
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/747 (54%), Positives = 544/747 (72%), Gaps = 3/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQY+YMLELKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+
Sbjct: 1 MKISVDGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P + KLIYC+RTV E+EK + ELK L +Y + KI+ + LSSRKN+C++
Sbjct: 61 LEHPLDVTKLIYCSRTVPEIEKVIEELKKLIDYYEKETKSKPKIVGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VR + + C F+E ++ ++PPG+Y++ DL
Sbjct: 121 VSREREGKIVDGRCHSLTASYVRERHNYDESTPICSFYEGFDMEGREQIIPPGIYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +GK + WCPYFLAR + A +VVYSY YLLDPK+A +SKE+ K SVVVFDEAHNID
Sbjct: 181 KDYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKNSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+ +E ++ N+ + + + + D +L+ EYNRLVEGL A
Sbjct: 241 NVCIDSMSVKINRKLMEKSSTNIQLLEKTVAEMREVDVNKLKEEYNRLVEGLKDAQLQRE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+++L+E VPGNIR AEHF+ L+R V+YL+ RL ++V +E P +F+
Sbjct: 301 TDVILANPILPNEVLEEVVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQESPAAFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I A I++K LRFC +RL SL+ T+EITD +F I + ATLV TYT GF+II+EP
Sbjct: 361 IQAKVAIERKPLRFCAQRLASLLRTMEITDLTDFSPIILVTHLATLVSTYTHGFTIIVEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+AVKP+FDRFQSV+ITSGTLSP+D+YP++LNFHPV+ S
Sbjct: 421 FDDKTPTVLNPILHFSCLDSSIAVKPIFDRFQSVIITSGTLSPLDMYPKILNFHPVIMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++ +G+DQ+ +S+K++ R D V RNYG+LLVE + VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVGKGNDQVTISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ ++A W D G++ ++ +HKL+FIETQD ET+LAL NY KAC+ GRGAV SVA
Sbjct: 541 SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR+SR DKRSKLP WI HL D NLST+ A+ I++ +
Sbjct: 661 AQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLNDNLCNLSTEEAIQISKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR+MAQP+ + +G +LL++ LEK
Sbjct: 721 LRQMAQPFTRENQLGL-SLLTREQLEK 746
>gi|308810260|ref|XP_003082439.1| DNA repair/transcription factor protein (ISS) [Ostreococcus tauri]
gi|116060907|emb|CAL57385.1| DNA repair/transcription factor protein (ISS) [Ostreococcus tauri]
Length = 792
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/808 (55%), Positives = 562/808 (69%), Gaps = 83/808 (10%)
Query: 1 MIFKLED-----VTVYFPYDNIYPEQYS--------------------YMLELKRALDAK 35
M F ++D + V+FPYD++YPEQ + YM E+KRALDA+
Sbjct: 1 MRFTIDDGGSAPIEVFFPYDSVYPEQVALARTRRLTRSARVRSIAKVAYMREMKRALDAR 60
Query: 36 GHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQT 95
GH +EMPTGTGKTI +LS+ SY L+ PE K+IYCTRTV EMEK L E+K L Y
Sbjct: 61 GHGAVEMPTGTGKTITVLSMCVSYQLAHPEVG-KIIYCTRTVPEMEKVLEEMKALQAYIE 119
Query: 96 RHLGP-AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR----------- 143
+ LG A++L++GLSSRKN+CVN V +R+SVD CR+ TASWVR
Sbjct: 120 KELGAETARMLSLGLSSRKNMCVNPAVADEGSRESVDGRCRRLTASWVRERRLERQARDA 179
Query: 144 --ALAAENP------NIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLA 195
+AAE+ + C++FE +E A AVLPPGVYTL DLR FG+ + WCPYFLA
Sbjct: 180 GRTVAAEDGEGDNEGGVSCCDWFEEFETAGEKAVLPPGVYTLHDLRQFGRAKKWCPYFLA 239
Query: 196 RHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQT 255
R+M+ FANV+VY+YQY+LDPKVA ++S ++KE VVVFDEAHNIDNVCIEALSV++R+QT
Sbjct: 240 RNMISFANVIVYNYQYMLDPKVASLVSSALEKECVVVFDEAHNIDNVCIEALSVNLRQQT 299
Query: 256 LEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA----WLSNPALPSD 311
LE A R+++ +N I++ K TD RLR EY RLV GLA +G L L NP +P D
Sbjct: 300 LENAGRSITSLNARIDKAKQTDERRLRQEYERLVNGLAQQGVLARGGGEDMLMNPVIPDD 359
Query: 312 ILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLR 371
IL+EAVPGNIRRAEHF+ VL+R V+YL+ RL++ A+AGID KTL+
Sbjct: 360 ILREAVPGNIRRAEHFVAVLKRFVEYLKFRLQSTQ-----------HCAANAGIDGKTLK 408
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLV---GTYTRGFSIIIEPFDERMPHIPD 428
L S ++E +Q I L G +GF
Sbjct: 409 VL---LRSPDESVEDARGGRHGRVQRIVVGGELCCARGDIFQGFR--------------S 451
Query: 429 PVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L+C DASLA+KPVF+RFQSV ITSGTLSPIDLYP+LL F+PV ++S +M+LTR+C+
Sbjct: 452 HTRALACLDASLAIKPVFERFQSVFITSGTLSPIDLYPKLLGFNPVCAKSLEMTLTRECL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
CPMV+TRG+DQ VSTKFD+R DP V +NYG++LV + VPDGIV FFVSYSYM+ I++
Sbjct: 512 CPMVITRGADQQAVSTKFDVRDDPNVIQNYGRILVGLAQTVPDGIVAFFVSYSYMENIVS 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDF 608
W+++GIL+EIMQHKLVFIET DVVET+LALDNYR+AC+CGRGA+F SVARGKVAEGIDF
Sbjct: 572 KWHETGILREIMQHKLVFIETTDVVETSLALDNYRRACNCGRGAIFLSVARGKVAEGIDF 631
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRS 668
DRHYGR V+M+GVP+QYTLS+IL ARLEYLR+TFQIKE DFL FDA+RQAAQCVGRVIRS
Sbjct: 632 DRHYGRAVVMYGVPYQYTLSRILRARLEYLRETFQIKESDFLAFDAVRQAAQCVGRVIRS 691
Query: 669 KADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
K DYG+M+FADKRY+ DKR KLPGWI SHL + LNLSTDMA+ +AR F+R M+QP+
Sbjct: 692 KKDYGLMVFADKRYNSQDKRGKLPGWITSHLHEEVLNLSTDMAMQVARTFMRSMSQPFSH 751
Query: 729 AGSIGRKTLLSQADLEKMTNDGSINEML 756
S +K+L Q L ++ +G E L
Sbjct: 752 DDS--KKSLFDQEMLNRLAAEGGYREAL 777
>gi|340710930|ref|XP_003394036.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Bombus terrestris]
Length = 759
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/747 (54%), Positives = 543/747 (72%), Gaps = 3/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQY+YMLELKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+
Sbjct: 1 MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P + KLIYC+RTV E+EK + ELK L +Y + G KI+ + LSSRKN+C++
Sbjct: 61 LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETGSKPKIVGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VR + + C F+E ++ +PPG+Y++ DL
Sbjct: 121 VSREREGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGKEQFMPPGIYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR + A +VVYSY YLLDPK+A +SKE+ K SVVVFDEAHNID
Sbjct: 181 KEYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+TLE ++ N+ + + + + D +L+ EY RLVEGL A
Sbjct: 241 NVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP +IL+E VPGNIR AEHF+ LRR V+YL+ RL ++V +E P +F+
Sbjct: 301 TDIILANPVLPDEILQEVVPGNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQESPAAFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ T+EITD +F + ATLV TYT+GF+II+EP
Sbjct: 361 VQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSPAILVTHLATLVSTYTKGFTIIVEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P++ +P+L C D+S+A+KP+FDRFQSVVITSGTLSP+D+YP++LNFHPV+ S
Sbjct: 421 FDDKTPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++ +G+DQ+ +S+K++ R D V RNYG+LLVE + VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ ++A W D G++ ++ +HKL+FIETQD ET+LAL NY +AC+ GRGAV SVA
Sbjct: 541 SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIRACENGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR+SR DKRSKLP WI HL D+ NLST+ A+ I++ +
Sbjct: 661 AQCVGRAIRGKTDYGIMVFADKRFSRMDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR+MAQP+ + +G +LL++ LEK
Sbjct: 721 LRQMAQPFTRENQLGL-SLLTREQLEK 746
>gi|410982712|ref|XP_003997692.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Felis catus]
Length = 760
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/731 (56%), Positives = 545/731 (74%), Gaps = 4/731 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNS 119
+ P KLIYC+RTV E+EK + EL KLLH Y+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLHFYEKQE-GEKLPFLGLALSSRKNLCIHP 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
V+ VD C TAS+VRA ++P++ C F+E ++ LP G+Y L D
Sbjct: 120 EVMPLRFGKDVDGKCHSLTASYVRAQYQQDPSLPHCRFYEEFDVHGRQVPLPAGIYNLDD 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNI
Sbjct: 180 LKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGN 297
DNVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 240 DNVCIDSMSVNITRRTLDRCQGNLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAAR 299
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 300 ETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLS 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIE
Sbjct: 360 GLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
PFD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV
Sbjct: 420 PFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMA 479
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
+F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 480 TFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFF 539
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SV
Sbjct: 540 TSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSV 599
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R
Sbjct: 600 ARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRH 659
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AAQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+
Sbjct: 660 AAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKY 719
Query: 718 FLRKMAQPYDK 728
FLR+MAQP+ +
Sbjct: 720 FLRQMAQPFHR 730
>gi|345480734|ref|XP_001605333.2| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Nasonia vitripennis]
Length = 759
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/750 (54%), Positives = 548/750 (73%), Gaps = 6/750 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQY+YML+LKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+
Sbjct: 1 MKISVDGLLVYFPYDYIYPEQYAYMLDLKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P KLIYC+RTV E+EK + ELK L +Y + KI+ + LSSRKN+C++
Sbjct: 61 LEHPHQVTKLIYCSRTVPEIEKVIEELKKLIDYYEKETKVLPKIIGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD+ C TAS+VR + + C F+E ++ ++PPG+Y++ D+
Sbjct: 121 VSKEREGKIVDSQCHALTASYVRERHNYDESTPVCGFYETFDIEGREMMMPPGIYSIDDM 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +GK + WCPYFLAR+ + A ++VYSY YLLDPK+A +SKE+ K SVVVFDEAHNID
Sbjct: 181 KEYGKDRNWCPYFLARYTIMHAQIIVYSYHYLLDPKIAEAVSKELAKSSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E + NLS + + + K DA +L+ EYN+LVEGL A
Sbjct: 241 NVCIDSMSVKLNRRTMEKSCANLSLLEKTVAEMKEDDANKLKDEYNKLVEGLKDAQVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+++L++ VPGNIR+AEHF+ L+R V+YL+ RL ++V +E PV+F+
Sbjct: 301 TDVVLANPVLPNEVLEDVVPGNIRKAEHFVGFLKRFVEYLKMRLRIQHVVQETPVTFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ A I++K LRFC ERL SL+ T+EITD +F + + ATLV TYT+GF+IIIEP
Sbjct: 361 VQAKICIERKPLRFCAERLASLLRTMEITDLTDFSPLILVTHLATLVATYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+KP+FDRFQSVVITSGTLSP+D+YP++LNFHPV+ S
Sbjct: 421 FDDKAPTVHNPILYFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+K++ R D V RNYG+LLVE + VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVAISSKYETREDVAVIRNYGQLLVEFAANVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ ++A W D GIL +I ++KL+FIETQD ET+LAL Y KACD GRGAV SVA
Sbjct: 541 SYLYMESVVAAWYDQGILDQIQRYKLIFIETQDAAETSLALYYYNKACDNGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQIKE DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIKENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR+SR DK+SKLP WI +L D NLST+ A+ I + +
Sbjct: 661 AQCVGRAIRGKTDYGIMVFADKRFSRIDKKSKLPKWIQEYLTDNLCNLSTEEAIQICKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
LR+MAQP+ + +G LS LE++ N
Sbjct: 721 LRQMAQPFSREDQLG----LSLLTLEQLQN 746
>gi|350400679|ref|XP_003485920.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Bombus impatiens]
Length = 777
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/743 (54%), Positives = 542/743 (72%), Gaps = 3/743 (0%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ + VYFPYD IYPEQY+YMLELKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+L P
Sbjct: 23 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYMLENP 82
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
+ KLIYC+RTV E+EK + ELK L +Y + KI+ + LSSRKN+C++ V
Sbjct: 83 LDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETESKPKIVGLVLSSRKNMCIHPEVSRE 142
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
VD C TAS+VR + + C F+E ++ +PPG+Y++ DL+ +G
Sbjct: 143 REGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGKEQFMPPGIYSIDDLKEYG 202
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
+ + WCPYFLAR + A +VVYSY YLLDPK+A +SKE+ K SVVVFDEAHNIDNVCI
Sbjct: 203 RDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNIDNVCI 262
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAW 302
+++SV + R+TLE ++ N+ + + + + D +L+ EY RLVEGL A +
Sbjct: 263 DSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARETDII 322
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
L+NP LP +IL+E VPGNIR AEHF+ LRR V+YL+ RL ++V +E P +F+ +
Sbjct: 323 LANPVLPDEILQEVVPGNIRNAEHFVGFLRRFVEYLKTRLRVQHVVQESPAAFLRDVQTK 382
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER 422
I++K LRFC ERL SL+ T+EITD +F + + ATLV TYT+GF+II+EPFD++
Sbjct: 383 VSIERKPLRFCAERLASLLRTMEITDLTDFSPVILVTHLATLVSTYTKGFTIIVEPFDDK 442
Query: 423 MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
P++ +P+L C D+S+A+KP+FDRFQSVVITSGTLSP+D+YP++LNFHPV+ SF M+
Sbjct: 443 TPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSSFTMT 502
Query: 483 LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSY 542
L R C+ PM++ +G+DQ+ +S+K++ R D V RNYG+LLVE + VPDG+VCFF SY Y
Sbjct: 503 LARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLY 562
Query: 543 MDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKV 602
M+ ++A W D G++ ++ +HKL+FIETQD ET+LAL NY +AC+ GRGAV SVARGKV
Sbjct: 563 MESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIRACENGRGAVLLSVARGKV 622
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCV 662
+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCV
Sbjct: 623 SEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCV 682
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
GR IR K DYG+M+FADKR+SR DKRSKLP WI HL D+ NLST+ A+ I++ +LR+M
Sbjct: 683 GRAIRGKTDYGIMVFADKRFSRMDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRWLRQM 742
Query: 723 AQPYDKAGSIGRKTLLSQADLEK 745
AQP+ + +G +LL++ LEK
Sbjct: 743 AQPFTRENQLGL-SLLTREQLEK 764
>gi|195430790|ref|XP_002063431.1| GK21904 [Drosophila willistoni]
gi|194159516|gb|EDW74417.1| GK21904 [Drosophila willistoni]
Length = 769
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/751 (53%), Positives = 548/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y RH + + LSSRKN+C++
Sbjct: 61 IEHPETIRKLIYCSRTVPEIEKVIAELQNLMVYYERHSDNPPAMTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS+VR + C++FE + A LP G+Y++ D+
Sbjct: 121 VSKEREGKAVDGKCYGLTASYVRDRHEMDAETPICQYFEGFSLEGKEAALPVGIYSIDDM 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+ + WCPYF+ARH + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEFGRSRNWCPYFMARHAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+++ + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNQLTKLVQEIREEDTNRLNEEYQRMVQGLKDATVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E F+
Sbjct: 301 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESSAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I++ I++K LRFC ERL SL+ TLEITD EF + I FATLV TYT+GF+IIIEP
Sbjct: 361 ISSKICIERKPLRFCAERLSSLLRTLEITDLTEFGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILYFSCMDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVAISSKFETREDTAVIRNYGQLLVEVAKTVPDGVVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SR DKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M ++
Sbjct: 721 LRRMAQPFTREDQLG-ISLLTLAQLETMEHE 750
>gi|195346339|ref|XP_002039723.1| GM15813 [Drosophila sechellia]
gi|194135072|gb|EDW56588.1| GM15813 [Drosophila sechellia]
Length = 769
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/751 (54%), Positives = 547/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y RH + LSSRKN+C++
Sbjct: 61 VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + C++FE + + LP GVY++ DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRERHDMDAETPICQYFEGFSLEGKESTLPVGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+ + + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I++ I++K LRFC ERL SL+ TLEI D EF + I FATLV TYT+GF+IIIEP
Sbjct: 361 ISSKICIERKPLRFCAERLSSLLRTLEINDLTEFGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+LTR C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 481 FTMTLTRPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SRHDKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFTREDQLG-ISLLTLAQLENMEQE 750
>gi|328786210|ref|XP_396155.4| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Apis mellifera]
Length = 759
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/747 (53%), Positives = 544/747 (72%), Gaps = 3/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQY+YMLELKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+
Sbjct: 1 MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P + KLIYC+RTV E+EK + ELK L +Y + KI+ + LSSRKN+C++
Sbjct: 61 LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETDNKPKIVGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VR + + C F+E ++ ++P G+Y++ DL
Sbjct: 121 VSREREGKIVDGRCHSLTASYVRERHNYDDSTPICNFYEGFDMEGKEQIMPSGIYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +GK + WCPYFLAR + A +VVYSY YLLDPK+A +S+E+ K SVV+FDEAHNID
Sbjct: 181 KEYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSRELSKSSVVIFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+TLE ++ N+ + + + + D +L+ EY RLVEGL A
Sbjct: 241 NVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+++L+E VPGNIR AEHF+ L+R V+YL+ RL ++V +E P +F+
Sbjct: 301 TDIILANPVLPNEVLQEVVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQESPAAFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ T+EITD +F I + ATLV TYT+GF+II+EP
Sbjct: 361 VQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSPIILVTHLATLVSTYTKGFTIIVEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P++ +P+L C D+S+A+KP+FDRFQSVVITSGTLSP+D+YP++LNFHPV+ S
Sbjct: 421 FDDKTPNVLNPILHFVCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++ +G+DQ+ +S+K++ R D V RNYG+LLVE + VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ ++A W D G++ ++ +HKL+FIETQD ET+LAL NY KAC+ GRGAV SVA
Sbjct: 541 SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKR+SR DKRSKLP WI HL D+ NLST+ A+ I++ +
Sbjct: 661 AQCVGRAIRGKTDYGIMIFADKRFSRIDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR+MAQP+ + +G +LL++ LEK
Sbjct: 721 LRQMAQPFTRENQLGL-SLLTREQLEK 746
>gi|380014617|ref|XP_003691322.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Apis florea]
Length = 759
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/747 (53%), Positives = 544/747 (72%), Gaps = 3/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQY+YMLELKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+
Sbjct: 1 MKISVDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P + KLIYC+RTV E+EK + ELK L +Y + KI+ + LSSRKN+C++
Sbjct: 61 LENPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEKETENKPKIVGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VR + + C F+E ++ ++P G+Y++ DL
Sbjct: 121 VSREREGKIVDGRCHSLTASYVRERHNYDDSTPICNFYEGFDMEGKEQIMPSGIYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +GK + WCPYFLAR + A +VVYSY YLLDPK+A +S+E+ K SVV+FDEAHNID
Sbjct: 181 KEYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSRELSKNSVVIFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+TLE ++ N+ + + + + D +L+ EY RLVEGL A
Sbjct: 241 NVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMREDDVNKLKEEYERLVEGLKDAHVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+++L+E VPGNIR AEHF+ L+R V+YL+ RL ++V +E P +F+
Sbjct: 301 TDIILANPVLPNEVLQEVVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQESPAAFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ T+EITD +F I + ATLV TYT+GF+II+EP
Sbjct: 361 VQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSPIILVTHLATLVSTYTKGFTIIVEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P++ +P+L C D+S+A+KP+FDRFQSVVITSGTLSP+D+YP++LNFHPV+ S
Sbjct: 421 FDDKTPNVLNPILHFVCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKILNFHPVIMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++ +G+DQ+ +S+K++ R D V RNYG+LLVE + VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ ++A W D G++ ++ +HKL+FIETQD ET+LAL NY KAC+ GRGAV SVA
Sbjct: 541 SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKR+SR DKRSKLP WI HL D+ NLST+ A+ I++ +
Sbjct: 661 AQCVGRAIRGKTDYGIMIFADKRFSRVDKRSKLPKWIQEHLTDSLCNLSTEEAVQISKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR+MAQP+ + +G +LL++ LEK
Sbjct: 721 LRQMAQPFTRENQLGL-SLLTREQLEK 746
>gi|296234099|ref|XP_002762284.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Callithrix jacchus]
Length = 760
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/730 (56%), Positives = 539/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LPPG+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDTHGREVPLPPGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G+ QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRHQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSHILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|157168345|ref|NP_001096787.1| TFIIH basal transcription factor complex helicase XPD subunit [Bos
taurus]
gi|182645388|sp|A6QLJ0.1|ERCC2_BOVIN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|151556394|gb|AAI47983.1| ERCC2 protein [Bos taurus]
gi|296477395|tpg|DAA19510.1| TPA: TFIIH basal transcription factor complex helicase subunit [Bos
taurus]
Length = 760
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 541/730 (74%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++LKEAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLKEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI+D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLYTLEISDLTDFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|355703655|gb|EHH30146.1| hypothetical protein EGK_10751 [Macaca mulatta]
Length = 760
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/730 (56%), Positives = 539/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL + V +E P SF++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQPVVQESPASFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|348557833|ref|XP_003464723.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Cavia porcellus]
Length = 760
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 542/730 (74%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLSFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDTSMPHCRFYEEFDAHGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQANLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL+++++ RL ++V +E P +F++S
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEFVKWRLRVQHVVQESPPAFLSS 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHQ 730
>gi|195585328|ref|XP_002082441.1| GD11571 [Drosophila simulans]
gi|194194450|gb|EDX08026.1| GD11571 [Drosophila simulans]
Length = 769
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/751 (54%), Positives = 547/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y RH + LSSRKN+C++
Sbjct: 61 VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + C++FE + + LP GVY++ DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRERHDMDAETPICQYFEGFSLEGKESTLPVGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+ + + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I++ I++K LRFC ERL SL+ TLEI+D EF + I FATLV TYT+GF+IIIEP
Sbjct: 361 ISSKICIERKPLRFCAERLSSLLRTLEISDLTEFGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SRHDKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFTREDQLG-ISLLTLAQLENMEQE 750
>gi|195382171|ref|XP_002049804.1| GJ20544 [Drosophila virilis]
gi|194144601|gb|EDW60997.1| GJ20544 [Drosophila virilis]
Length = 769
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/751 (53%), Positives = 549/751 (73%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y RH + + LSSRKN+C++
Sbjct: 61 IEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYDRHCPVPPGLTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + + C++FE + + LP G+Y+L DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIREHHELDAEVPICQYFEGFTLEGKESTLPVGIYSLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +E+ VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMTREACVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+ +E +T L+++ + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRIVERSTNALNQLTKLVQDMREEDTNRLNEEYQRMVQGLKDASVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LPSD+LKE VPGNIR A+HFL LRR V+Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPSDVLKEVVPGNIRNADHFLSFLRRFVEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+++ I++K LRFC ERL SL+ TLEI+D E+ + I FATLV TYT+GF+IIIEP
Sbjct: 361 VSSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P++ SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPIMHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVAISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SR DKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFSREDQLG-ISLLTLAQLESMEQE 750
>gi|307686333|dbj|BAJ21097.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [synthetic construct]
Length = 760
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 541/730 (74%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP+++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPNEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|15834617|ref|NP_000391.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Homo sapiens]
gi|119540|sp|P18074.1|ERCC2_HUMAN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=Basic transcription factor 2 80
kDa subunit; Short=BTF2 p80; AltName: Full=CXPD;
AltName: Full=DNA excision repair protein ERCC-2;
AltName: Full=DNA repair protein complementing XP-D
cells; AltName: Full=TFIIH basal transcription factor
complex 80 kDa subunit; Short=TFIIH 80 kDa subunit;
Short=TFIIH p80; AltName: Full=Xeroderma pigmentosum
group D-complementing protein
gi|17939382|gb|AAL48323.1| ERCC2 [Homo sapiens]
gi|82568960|gb|AAI08256.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
Length = 760
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 540/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|281183417|gb|ADA53577.1| RH28463p [Drosophila melanogaster]
Length = 781
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/751 (53%), Positives = 547/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 13 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 72
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y RH + LSSRKN+C++
Sbjct: 73 VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPE 132
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + C++FE + + LP GVY++ DL
Sbjct: 133 VSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDL 192
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 193 KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID 252
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+ + + ++ + D RL EY R+V+GL A
Sbjct: 253 NVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD 312
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 313 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 372
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I++ I++K LRFC ERL SL+ TLEI+D E+ + I FATLV TYT+GF+IIIEP
Sbjct: 373 ISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEP 432
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 433 FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 492
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 493 FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 552
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 553 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 612
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 613 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 672
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SRHDKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 673 AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 732
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 733 LRRMAQPFTREDQLG-ISLLTLAQLENMEQE 762
>gi|66827895|ref|XP_647302.1| transcription factor IIH component [Dictyostelium discoideum AX4]
gi|74859460|sp|Q55G81.1|ERCC2_DICDI RecName: Full=TFIIH basal transcription factor complex helicase
repD subunit; AltName: Full=DNA excision repair
cross-complementing protein-2 homolog; AltName: Full=DNA
repair protein D
gi|60475224|gb|EAL73159.1| transcription factor IIH component [Dictyostelium discoideum AX4]
Length = 776
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/749 (54%), Positives = 552/749 (73%), Gaps = 10/749 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +ED+ VYFPY IYPEQYSYM+ LKR+LD G C+LEMP+GTGKT++LLSLI+SY
Sbjct: 1 MKFYIEDLLVYFPYSYIYPEQYSYMVALKRSLDNGGPCILEMPSGTGKTVSLLSLISSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA-KILAIGLSSRKNLCVNS 119
+ P +KLIYC+RTV E+E+ E + + Y+ +G + K L + +SSR+NLC+
Sbjct: 61 VKNPS--IKLIYCSRTVPEIEQATEEARRVLQYRNSEMGEESPKTLCMSMSSRRNLCIQP 118
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
RV + VDA CR+ T+SW R E+P E C+FFEN+E + +L GVY+L+D
Sbjct: 119 RVSEERDGKVVDALCRELTSSWNR----ESPTSEKCKFFENFE-SNGKEILLEGVYSLED 173
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ +G + CPYFL+RHM+ FAN+V++SYQYLLDPK+A +IS S+VVFDEAHNI
Sbjct: 174 LKEYGLKHQMCPYFLSRHMLNFANIVIFSYQYLLDPKIASLISSSFPSNSIVVFDEAHNI 233
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL- 298
DNVCI ALS+++ + L+ +++N+++IN++IE K D RL+ EY RLV GLA G+
Sbjct: 234 DNVCINALSINIDNKLLDTSSKNIAKINKQIEDIKKVDEKRLKDEYQRLVNGLARSGSTR 293
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ S+P LP+D+++EAVPGNIR+AEHF+ +LRR+V YL+ RL+++ + E P++F+
Sbjct: 294 ADETTSDPVLPNDVIQEAVPGNIRKAEHFISLLRRVVDYLKSRLKSQMLLSESPLAFLQG 353
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +TLRFC RL SL+ TL I D ++F I I DFATLVGTY GF IIIEP
Sbjct: 354 LYHATQISSRTLRFCSSRLSSLLRTLRINDVNQFSGISLIADFATLVGTYNNGFLIIIEP 413
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+ +R + D + Q C DAS+ +KP+FD+++SVVITSGTLSP+D+Y ++LNF P V
Sbjct: 414 YYQRQNNTYDQIFQFCCLDASIGMKPIFDKYRSVVITSGTLSPLDIYTKMLNFRPTVVER 473
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
MSL R+CICP +LTRGSDQ+ +STKFD+RSD V RNYG LLVE+ +IVPDGI+CFF
Sbjct: 474 LTMSLNRNCICPCILTRGSDQISISTKFDVRSDTAVVRNYGALLVEVSAIVPDGIICFFT 533
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYM++I++ WN+ G+L I+ +KL+F+ET D E+ LAL NY+KACD GRGAV SVA
Sbjct: 534 SYSYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAESALALQNYKKACDSGRGAVLLSVA 593
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR VI++G+P+ T SK+L ARLE+LRD +QI+E +FLTFDA+R A
Sbjct: 594 RGKVSEGIDFDNQYGRCVILYGIPYINTESKVLRARLEFLRDRYQIRENEFLTFDAMRTA 653
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QCVGRVIR K+DYG+MIFADKRY+R DKR+KLP WIL + HLNLSTDMA+ +++ F
Sbjct: 654 SQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKLPQWILQFCQPQHLNLSTDMAISLSKTF 713
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMT 747
LR+M QP+ + +G K+L S +EK +
Sbjct: 714 LREMGQPFSREEQLG-KSLWSLEHVEKQS 741
>gi|350538411|ref|NP_001233519.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
gi|397493359|ref|XP_003817575.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Pan paniscus]
gi|343958692|dbj|BAK63201.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
Length = 760
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 540/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDSSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|426389184|ref|XP_004061004.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Gorilla gorilla gorilla]
gi|83405523|gb|AAI10524.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
gi|119577745|gb|EAW57341.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_a [Homo sapiens]
gi|383416479|gb|AFH31453.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Macaca mulatta]
Length = 760
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 540/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|334328785|ref|XP_003341121.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Monodelphis
domestica]
Length = 807
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/728 (56%), Positives = 539/728 (74%), Gaps = 2/728 (0%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + V+FPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKTI+LL+LI +Y
Sbjct: 50 LNVDGLLVHFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTISLLALIVAYQRV 109
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L N + G L + LSSRKNLC++ V
Sbjct: 110 HPLEVTKLIYCSRTVPEIEKVIEELRKLMNSFEKQEGEKVPFLGLALSSRKNLCIHPEVT 169
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA ++ ++ C F+E ++ +P G+Y L DL+A
Sbjct: 170 PLRFGKDVDGKCHSLTASYVRAQRQQDSSVPHCRFYEEFDAQGRQMPIPWGIYNLDDLKA 229
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
FG+Q+GWCPYFLAR+ + ANV+VYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 230 FGRQKGWCPYFLARYSILHANVIVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 289
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPN 300
CI+++SV++ R+TL+ NL + + + + K TD RLR EY RLVEGL A +
Sbjct: 290 CIDSMSVNLTRRTLDRCQNNLETLQRTVHKIKETDEKRLREEYRRLVEGLREASVARETD 349
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL T++V +E P +F+ +
Sbjct: 350 AHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRTQHVVQESPPAFLGGLA 409
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY+RGF+IIIEPFD
Sbjct: 410 HRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLSNFATLVSTYSRGFTIIIEPFD 469
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
ER P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+++YP++L+FHPV +F
Sbjct: 470 ERTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLEIYPKILDFHPVTMATFT 529
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY
Sbjct: 530 MTLARVCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSY 589
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +A W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARG
Sbjct: 590 QYMESTVAAWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARG 649
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF HYGR VIMFGVP+ YT S+IL ARLE+LRD FQI+E DFLTFDA+R AAQ
Sbjct: 650 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEFLRDQFQIRENDFLTFDAMRHAAQ 709
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
CVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR
Sbjct: 710 CVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLR 769
Query: 721 KMAQPYDK 728
+MAQP+ +
Sbjct: 770 QMAQPFHR 777
>gi|328770825|gb|EGF80866.1| hypothetical protein BATDEDRAFT_29908 [Batrachochytrium
dendrobatidis JAM81]
Length = 758
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/734 (55%), Positives = 550/734 (74%), Gaps = 7/734 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L+D+ + FPY+ IYPEQY+YM ++KRALDA+GHCLLEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKFTLDDLPIIFPYEYIYPEQYAYMKDMKRALDAQGHCLLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RTV E+EK LAEL L Y+ G L +GL+SR+NLC++
Sbjct: 61 QFYPEKR-KLIYCSRTVPEIEKALAELSRLMKYREEQ-GLVENFLGLGLTSRRNLCIHP- 117
Query: 121 VLAAENRDSV-DAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
+++ E R +V DA CR T+ WVR A P+IE CEF+E E A + A +P GVYTL+D
Sbjct: 118 IVSKEKRGTVTDAKCRNLTSPWVRENAKHEPDIELCEFYETLEAADTTATVPSGVYTLED 177
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ + ++ +CPYFLAR ++ FANV++YSY YLLDPKVA ++SKE+ ++ +VVFDEAHNI
Sbjct: 178 LKEYSTKKKYCPYFLARRLLPFANVIIYSYHYLLDPKVADMVSKELSRDCIVVFDEAHNI 237
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP 299
DNVC E+LS+ + + L+ + R+++ +++ IE K +++ +L+ EY RL + R
Sbjct: 238 DNVCTESLSIDISKPMLDASARSVAELSRRIESMKVSNSEKLQNEYTRLRQAQESRD--A 295
Query: 300 NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI 359
++NP LP DIL+E+VPGNIRRAEHF+ LRR ++YL+ R+ +V E P+SF+ +
Sbjct: 296 GEIMTNPVLPDDILQESVPGNIRRAEHFVAFLRRFIEYLKTRMRVMHVVAESPLSFLQHV 355
Query: 360 TAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPF 419
ID+K LRF ERL SL+ TLEI D ++ +Q + FATLV TY +GF +I+EPF
Sbjct: 356 KEITFIDKKPLRFSAERLGSLIKTLEINDLTDYSALQKVASFATLVATYQKGFVLILEPF 415
Query: 420 DERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSF 479
+ M IP+PVL +C DA+LA+KPVFDRF SV+ITSGTLSP++LYP LL F PVV+ S+
Sbjct: 416 ENDMDTIPNPVLHFTCLDATLAIKPVFDRFSSVIITSGTLSPMELYPMLLGFEPVVTESY 475
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
+M+LTR C P+++TRGSDQ+ VS+KF++R+D V RNYG +L+E I PDG+VCFF S
Sbjct: 476 QMTLTRTCFLPLIVTRGSDQVTVSSKFEVRNDVAVVRNYGNILLEFAKITPDGLVCFFPS 535
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR 599
Y YM+ I+A WND G+L+E+++ KL+FIET D ET++AL+NYR+ACD GRGAV SVAR
Sbjct: 536 YLYMESIVAAWNDLGMLRELLKLKLIFIETPDATETSIALENYRQACDNGRGAVLLSVAR 595
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAA 659
GKV+EG+DFD +YGR VI+FG+P+QYT S+IL ARLEYLRD +I+E DFLTFDA+R A
Sbjct: 596 GKVSEGVDFDHNYGRAVILFGIPYQYTESRILKARLEYLRDNSRIRENDFLTFDAMRHGA 655
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 719
QCVGRV+R K DYG+M+FADKR+ R DKRSKLP WILS + +A +NLSTDMA+ +A++FL
Sbjct: 656 QCVGRVLRGKTDYGLMVFADKRFGRMDKRSKLPKWILSGMTEAGMNLSTDMAVSMAKKFL 715
Query: 720 RKMAQPYDKAGSIG 733
R MAQP + S+G
Sbjct: 716 RTMAQPLE-GNSMG 728
>gi|45551134|ref|NP_726036.2| xeroderma pigmentosum D, isoform A [Drosophila melanogaster]
gi|45445340|gb|AAM70857.2| xeroderma pigmentosum D, isoform A [Drosophila melanogaster]
Length = 769
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/751 (53%), Positives = 547/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y RH + LSSRKN+C++
Sbjct: 61 VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + C++FE + + LP GVY++ DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+ + + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I++ I++K LRFC ERL SL+ TLEI+D E+ + I FATLV TYT+GF+IIIEP
Sbjct: 361 ISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SRHDKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFTREDQLG-ISLLTLAQLENMEQE 750
>gi|402905923|ref|XP_003915757.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Papio anubis]
Length = 760
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 540/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|194881824|ref|XP_001975021.1| GG22096 [Drosophila erecta]
gi|190658208|gb|EDV55421.1| GG22096 [Drosophila erecta]
Length = 769
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/751 (53%), Positives = 548/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y R + + LSSRKN+C++
Sbjct: 61 VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERQCPNPPPLTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + C++FE + + LP GVY++ DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRERHEMDAETPICQYFEGFSMEGKESTLPVGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+++ + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNQLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I++ I++K LRFC ERL SL+ TLEI+D E+ + I FATLV TYT+GF+IIIEP
Sbjct: 361 ISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SRHDKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFTREDQLG-ISLLTLAQLENMEQE 750
>gi|119936449|gb|ABM06129.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 protein [Bos taurus]
Length = 773
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/728 (56%), Positives = 540/728 (74%), Gaps = 2/728 (0%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y +
Sbjct: 16 LNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRA 75
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++ V
Sbjct: 76 YPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPEVT 135
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL+A
Sbjct: 136 PLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDLKA 195
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 196 VGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 255
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPN 300
CI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A +
Sbjct: 256 CIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARETD 315
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
A L+NP LP ++LKEAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++ +
Sbjct: 316 AHLANPVLPDEVLKEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLA 375
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
I +K LRFC ERL SL+ TLEI+D +F + + +FATLV TY +GF+IIIEPFD
Sbjct: 376 QRVCIQRKPLRFCAERLRSLLYTLEISDLTDFSPLTLLANFATLVSTYAKGFTIIIEPFD 435
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F
Sbjct: 436 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFT 495
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY
Sbjct: 496 MTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSY 555
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARG
Sbjct: 556 QYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARG 615
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQ
Sbjct: 616 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQ 675
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
CVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR
Sbjct: 676 CVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLR 735
Query: 721 KMAQPYDK 728
+MAQP+ +
Sbjct: 736 QMAQPFHR 743
>gi|321463407|gb|EFX74423.1| hypothetical protein DAPPUDRAFT_324413 [Daphnia pulex]
Length = 760
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/749 (55%), Positives = 544/749 (72%), Gaps = 3/749 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELK ALDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKHALDAKGHCLLEMPSGTGKTTTLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P + KL+YC+RTV E+EK + EL+ L NY + +G IL + LSSRKNLC++
Sbjct: 61 KAHPLDLTKLVYCSRTVPEIEKVMEELRKLMNYYEKEMGMEQNILGLALSSRKNLCIHPS 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA A + + C F+E ++ LPPGVY L DL
Sbjct: 121 VSKEREGKVVDGRCYGLTASFVRARHAGDDAVPVCNFYEGFDAHGKEFPLPPGVYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ +GWCPYFLAR+ + AN+VVYSY YLLDPK+A ++SKE+ K SVVVFDEAHNID
Sbjct: 181 KEYGQAKGWCPYFLARYTITHANIVVYSYHYLLDPKIAEVVSKEISKTSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + ++ L+ + ++ + I K D RL EY RLVEGL A
Sbjct: 241 NVCIDSMSVKITKRLLDKCSNSIQILETTISNMKENDNRRLEKEYQRLVEGLRDANIARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L NP LPS+IL+EAVPG IR AEHF+ L+R+V+Y++ RL ++V +E P F+
Sbjct: 301 TDMALVNPVLPSEILEEAVPGTIRTAEHFVAFLKRVVEYIKTRLRVQHVVQESPAGFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I ID+K LRF ERL SL+ TLEI+D +F + T+ FATLV TYT+GF+IIIEP
Sbjct: 361 IHIKVCIDRKPLRFTAERLSSLIRTLEISDLTDFSPLVTVSHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F++R P + +P+L SC D+S+A+KPVF+RFQ+VVITSGTLSP+D+YP++L+FHPV+ S
Sbjct: 421 FEDRAPTVSNPILYFSCLDSSIAIKPVFNRFQTVVITSGTLSPLDMYPKILDFHPVIMTS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R CI PM++++G+DQ+ +S++++ R D V RNYG LLVE+ + VPDGIVCFF
Sbjct: 481 FTMTLARPCILPMIVSKGNDQVAMSSRYETREDTAVIRNYGNLLVEVAAAVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ I+++W D GI+ ++ +HKL+FIETQD ET+LAL NY KACD GRGAV SVA
Sbjct: 541 SYLYLETIVSSWYDQGIIDQLQRHKLLFIETQDAAETSLALINYIKACDNGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD H GR V+MFG+P+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFDHHLGRAVLMFGIPYVYTQSRILRARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GR +R K DYG+MI ADKR+SR DKRSKLP WI HL+D + NLST+ + I++ +
Sbjct: 661 AQCLGRCMRGKTDYGIMILADKRFSRADKRSKLPKWIQEHLKDTNCNLSTEECVQISKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTL-LSQADLEKM 746
LR+MAQP+ + +G L L Q E+M
Sbjct: 721 LRQMAQPFSREDQLGISLLTLEQLQSEEM 749
>gi|296645|emb|CAA36463.1| ercc2 gene product [Homo sapiens]
Length = 730
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 540/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|403299021|ref|XP_003940291.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Saimiri boliviensis boliviensis]
Length = 782
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/728 (56%), Positives = 538/728 (73%), Gaps = 2/728 (0%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y +
Sbjct: 25 LNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRA 84
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++ V
Sbjct: 85 YPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVT 144
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA + ++ C F+E ++ LPPG+Y L DL+A
Sbjct: 145 PLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDTHGREVPLPPGIYNLDDLKA 204
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G+ GWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 205 LGRHHGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 264
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPN 300
CI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A +
Sbjct: 265 CIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETD 324
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++ +
Sbjct: 325 AHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLA 384
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEPFD
Sbjct: 385 QRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFD 444
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F
Sbjct: 445 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFT 504
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY
Sbjct: 505 MTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSY 564
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARG
Sbjct: 565 QYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARG 624
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQ
Sbjct: 625 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQ 684
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
CVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR
Sbjct: 685 CVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLR 744
Query: 721 KMAQPYDK 728
+MAQP+ +
Sbjct: 745 QMAQPFHR 752
>gi|346986337|ref|NP_001231320.1| TFIIH basal transcription factor complex helicase XPD subunit
[Cricetulus griseus]
gi|2495145|sp|Q60452.1|ERCC2_CRIGR RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|604908|gb|AAC13749.1| nucleotide excision repair protein [Cricetulus griseus]
Length = 760
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/730 (55%), Positives = 541/730 (74%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++
Sbjct: 61 RAFPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDAHGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL D++LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|380799421|gb|AFE71586.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1, partial [Macaca mulatta]
Length = 771
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/728 (56%), Positives = 539/728 (74%), Gaps = 2/728 (0%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y +
Sbjct: 14 LNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRA 73
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++ V
Sbjct: 74 YPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVT 133
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL+A
Sbjct: 134 PLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKA 193
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 194 LGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 253
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPN 300
CI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A +
Sbjct: 254 CIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETD 313
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++ +
Sbjct: 314 AHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLA 373
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEPFD
Sbjct: 374 QRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFD 433
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F
Sbjct: 434 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFT 493
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY
Sbjct: 494 MTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSY 553
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARG
Sbjct: 554 QYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARG 613
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQ
Sbjct: 614 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQ 673
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
CVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR
Sbjct: 674 CVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLR 733
Query: 721 KMAQPYDK 728
+MAQP+ +
Sbjct: 734 QMAQPFHR 741
>gi|146741362|dbj|BAF62336.1| DNA-repair protein complementing XP-D cells [Sus scrofa]
Length = 756
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/726 (56%), Positives = 539/726 (74%), Gaps = 2/726 (0%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y + P
Sbjct: 1 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYP 60
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++ V
Sbjct: 61 LEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPL 120
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
VD C TAS+VRA ++P++ C F+E ++ LP G+Y L DL+A G
Sbjct: 121 RFGKDVDGKCHSLTASYVRAQYQQDPSLPHCRFYEEFDVHGRQVPLPAGIYNLDDLKALG 180
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI
Sbjct: 181 RRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCI 240
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAW 302
+++SV++ R+ L+ NL + + + R K TD RLR EY RLVEGL A +A
Sbjct: 241 DSMSVNLTRRMLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAH 300
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++ +
Sbjct: 301 LANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQR 360
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER 422
I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEPFD+R
Sbjct: 361 VCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDR 420
Query: 423 MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+
Sbjct: 421 TPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMT 480
Query: 483 LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSY 542
L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY Y
Sbjct: 481 LARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQY 540
Query: 543 MDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKV 602
M+ +A W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV
Sbjct: 541 MESTVAAWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKV 600
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCV 662
+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCV
Sbjct: 601 SEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCV 660
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
GR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+M
Sbjct: 661 GRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQM 720
Query: 723 AQPYDK 728
AQP+ +
Sbjct: 721 AQPFHR 726
>gi|289802977|ref|NP_001166280.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Rattus norvegicus]
gi|149056774|gb|EDM08205.1| rCG54110 [Rattus norvegicus]
Length = 760
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/730 (55%), Positives = 541/730 (74%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDTHGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTITNPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL D++LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|195486599|ref|XP_002091573.1| GE12176 [Drosophila yakuba]
gi|194177674|gb|EDW91285.1| GE12176 [Drosophila yakuba]
Length = 769
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/751 (53%), Positives = 548/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y R+ + + LSSRKN+C++
Sbjct: 61 VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERNCPNPPPLTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + C++FE + + LP GVY++ DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRERHEMDAETPICQYFEGFSMEGKESTLPVGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRARNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+++ + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNQLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I+ I++K LRFC ERL SL+ TLEI+D E+ + I FATLV TYT+GF+IIIEP
Sbjct: 361 ISTKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SRHDKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFTREDQLG-ISLLTLAQLENMEQE 750
>gi|195170160|ref|XP_002025881.1| GL10160 [Drosophila persimilis]
gi|198461162|ref|XP_002138963.1| GA25100 [Drosophila pseudoobscura pseudoobscura]
gi|194110745|gb|EDW32788.1| GL10160 [Drosophila persimilis]
gi|198137256|gb|EDY69521.1| GA25100 [Drosophila pseudoobscura pseudoobscura]
Length = 769
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/751 (53%), Positives = 546/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKISIDGLLVYFPYEYIYPEQYAYMLELKRTLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y R + + LSSRKNLC++
Sbjct: 61 IEHPETIRKLIYCSRTVPEIEKVIAELQNLMVYYERECVKPPAMTGLVLSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + + C++FE + + LP G+Y+L DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRDKHELDTDTPICQYFEGFSLEGKESTLPIGIYSLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A +VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFLARYAISHAQIVVYSYHYLLDPKIAQVVSKEMTRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+++ + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNQLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++NP LP+D+L E VPGNIR A+HFL LRR +++++ RL +V +E P F+
Sbjct: 301 TDMIMANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEFIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I+A I++K LRFC ERL SL+ TLEITD E+ + I FATLV TYT+GF+IIIEP
Sbjct: 361 ISAKICIERKPLRFCAERLSSLLRTLEITDMTEYGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGVVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SR DKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFSREDQLG-ISLLTLAQLENMEQE 750
>gi|2114484|gb|AAB58296.1| DNA helicase [Mus musculus]
Length = 760
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/730 (56%), Positives = 541/730 (74%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDIHGRQMPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGAV SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL D++LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|443703659|gb|ELU01094.1| hypothetical protein CAPTEDRAFT_167887 [Capitella teleta]
Length = 786
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/748 (53%), Positives = 546/748 (72%), Gaps = 6/748 (0%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
L+ + VYFPYD IYPEQY+YM ELKRALDA+GHC LEMP+GTGKT++LLSLI +Y+ +P
Sbjct: 31 LDGLLVYFPYDYIYPEQYAYMQELKRALDAQGHCALEMPSGTGKTVSLLSLIVAYMKQRP 90
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
+ KLIYC+RTV E+EK + ELK L Y R G + ++ + LSSRKNLC++ +
Sbjct: 91 LDVTKLIYCSRTVPELEKVVEELKNLIEYYERETGEPSTLVGLALSSRKNLCIHPELRGQ 150
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
+ +DA C TAS VR E+ +I C ++E+Y+ LPPG+Y L LR +G
Sbjct: 151 RDGKEIDARCHAMTASHVRNRHQEDDSIPVCSYYEDYDAHGREVPLPPGIYDLDKLREYG 210
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
++GWCPYF+AR+ + +++VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID+VCI
Sbjct: 211 TEKGWCPYFMARYAIMHSSIVVYSYYYLLDPKIADLVSKELSKKSVVVFDEAHNIDSVCI 270
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAW 302
E++S + R+T++ N+ ++ + I+ K D +L+ EY R+VEGL A +
Sbjct: 271 ESMSCVISRRTVDKCHTNIEKLQECIDTIKEHDQQKLKDEYLRMVEGLRDANVARETDVV 330
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
LSNP LP ++L+EAVPG IR AEHFL ++R ++Y++ RL ++V +E P F+ I+
Sbjct: 331 LSNPVLPDEVLQEAVPGGIRNAEHFLVFMKRFLEYIKTRLRAQHVVQESPPVFLRDISNK 390
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER 422
ID+K LRFC ERL SL+ TLE+T+ +F + + +FAT+V TYT+GF++I+EPFD+R
Sbjct: 391 VCIDRKPLRFCSERLRSLLRTLELTNLQDFSPLTLMANFATMVSTYTKGFTLIMEPFDDR 450
Query: 423 MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
P I +P+L SC DAS+A+KPVFDRFQSV+ITSGTLSP+D+YP++L+F PV S+ M+
Sbjct: 451 TPTISNPILHFSCMDASIAIKPVFDRFQSVIITSGTLSPLDIYPKILDFRPVTMSSYTMT 510
Query: 483 LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSY 542
L R CI P++++RG+DQ+ +S+KF+ R DP V RNYG LLV++ ++VPDG+V FF SY Y
Sbjct: 511 LARQCILPLIVSRGNDQVTISSKFETREDPDVIRNYGNLLVDLAAVVPDGVVAFFTSYVY 570
Query: 543 MDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKV 602
M+ I+A W D GI+ ++ +HK++FIETQD ET+LAL N++KACD GRGAV SVARGKV
Sbjct: 571 METIVAAWYDQGIIDQVQRHKVLFIETQDAAETSLALANFQKACDNGRGAVLLSVARGKV 630
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCV 662
+EG+DFD HYGR VIMFGVP+ YT S+IL ARLEYLRD F I+E DFLTFDA+R AAQCV
Sbjct: 631 SEGVDFDHHYGRAVIMFGVPYVYTQSRILKARLEYLRDNFNIRENDFLTFDAMRHAAQCV 690
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
GR +R K DYG+MIFADKR+ R DKR KLP WI HL+D NLST+ + + + FLR+M
Sbjct: 691 GRALRGKTDYGIMIFADKRFGRADKRQKLPRWIQEHLKDGVCNLSTEECVQVCKRFLRQM 750
Query: 723 AQPYDKAGSIGRKTL----LSQADLEKM 746
AQP+ + +G L + D++KM
Sbjct: 751 AQPFSREDQLGHSLLTLEQVQSEDMQKM 778
>gi|31542614|ref|NP_031975.2| TFIIH basal transcription factor complex helicase XPD subunit [Mus
musculus]
gi|341940664|sp|O08811.2|ERCC2_MOUSE RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|26349935|dbj|BAC38607.1| unnamed protein product [Mus musculus]
gi|148691193|gb|EDL23140.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mus musculus]
Length = 760
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/730 (55%), Positives = 541/730 (74%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDIHGRQMPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL D++LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|395854140|ref|XP_003799556.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Otolemur garnettii]
Length = 760
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/730 (55%), Positives = 539/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDTSLPHCRFYEEFDAHGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KTLGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+ L+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRILDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFESREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARVDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|345785629|ref|XP_541562.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Canis lupus familiaris]
Length = 760
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/730 (55%), Positives = 539/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V+ VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VMPLRFGKDVDGKCHSLTASYVRAQYQQDSSLPHCRFYEEFDVHGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNITRRTLDRCQGNLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+ DFLT DA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRXNDFLTLDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVG IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 661 AQCVGGAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|74219327|dbj|BAE26794.1| unnamed protein product [Mus musculus]
Length = 760
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/730 (55%), Positives = 540/730 (73%), Gaps = 2/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + E + L ++ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEERRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDIHGRQMPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 421 FDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL D++LNL+ D + +A+ F
Sbjct: 661 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF 720
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 721 LRQMAQPFHR 730
>gi|195025610|ref|XP_001986090.1| GH20727 [Drosophila grimshawi]
gi|193902090|gb|EDW00957.1| GH20727 [Drosophila grimshawi]
Length = 769
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/751 (53%), Positives = 546/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y +H + + LSSRKN+C++
Sbjct: 61 IEHPERIRKLIYCSRTVPEIEKVIAELQNLMVYYDKHAHTPPGMTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + + C++FE + + LP G+Y++ DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRERHEMDAEVPICQYFEGFTLEGKESTLPVGIYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYF AR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFTARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMTRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+ + + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNNLTKLVQDMRDEDTNRLNEEYQRMVQGLKDASVQRD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPKDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+++ I++K LRFC ERL SL+ TLEI+D EF + I FATLV TYT+GF+IIIEP
Sbjct: 361 VSSKICIERKPLRFCAERLSSLLRTLEISDMTEFGALTLITHFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P++ SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPIMHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVSISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SR DKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 661 AQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 721 LRRMAQPFSREVQLG-ISLLTLAQLEGMEQE 750
>gi|347969002|ref|XP_311900.4| AGAP002988-PA [Anopheles gambiae str. PEST]
gi|333467742|gb|EAA08105.4| AGAP002988-PA [Anopheles gambiae str. PEST]
Length = 760
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/751 (53%), Positives = 543/751 (72%), Gaps = 3/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR DAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MRISVDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYI 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P KLIYC+RTV E+EK +AELK L NY + G I + LSSRKN+C++
Sbjct: 61 LENPHVVRKLIYCSRTVPEIEKVIAELKHLMNYYEKQTGAMPNITGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VDA C TAS+VR AA + + C+++E ++ +LPPGVY++ DL
Sbjct: 121 VSREREGKIVDARCYGMTASYVRERAAHDESAPVCQYYEGFQAEGKENMLPPGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++ WCPYFL+R + A+VVVYSY YLLDPKVA ++SKE+ +ESVVV DEAHNID
Sbjct: 181 KEFGRERNWCPYFLSRFAINQAHVVVYSYYYLLDPKVAEVVSKELARESVVVCDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVC++++SV + R+ +E +T + + +++ K D RL EY RLV+GL A
Sbjct: 241 NVCVDSMSVKINRRLIERSTTGIHNLEKKVAELKEDDKRRLNEEYVRLVQGLKDASFARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+++++E VPGNIR A+HFL L+R ++Y++ RL ++V +E P F+
Sbjct: 301 TDMVLANPVLPNEVIREVVPGNIRNADHFLSFLKRFIEYIKSRLRVQHVVQESPAGFLRD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC +RL SL+ TLEITD E+ + I FATLV TYT+GF+IIIEP
Sbjct: 361 VQQKVCIERKPLRFCADRLQSLLRTLEITDLSEYGPLSVITSFATLVSTYTKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P++ SC D+S+A+KP+F RFQSVVITSGTLSP+D+YP++L+F PVV S
Sbjct: 421 FDDKTPTVSNPIMHFSCLDSSIAMKPIFQRFQSVVITSGTLSPMDMYPKILDFEPVVMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++ RG+DQ+ +S++F+ R D V RNYG+LLVE VPDG+VCFF
Sbjct: 481 FTMTLARPCLLPMIVARGNDQVAISSRFETREDTAVTRNYGQLLVETAKTVPDGVVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KAC+CGRGAV +VA
Sbjct: 541 SYLYLESVVASWYDQGIIDTLLRYKLLFIETQDNAETSYALMNYVKACECGRGAVLLAVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDALR A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDALRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKR+SR DKR KLP WI HL D NLST+ ++ +A+ +
Sbjct: 661 AQCVGRAIRGKTDYGIMIFADKRFSRQDKRGKLPKWIQEHLTDNLSNLSTEESMQLAKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ L+ M +
Sbjct: 721 LRQMAQPFTREDQLG-VSLLTLEQLQSMERE 750
>gi|330841374|ref|XP_003292674.1| hypothetical protein DICPUDRAFT_50564 [Dictyostelium purpureum]
gi|325077069|gb|EGC30807.1| hypothetical protein DICPUDRAFT_50564 [Dictyostelium purpureum]
Length = 788
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/746 (54%), Positives = 549/746 (73%), Gaps = 10/746 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ VYFPY YPEQY YM+ LK++LD G C+LEMP+GTGKT++LL+LI+SY
Sbjct: 1 MKFFIDDLAVYFPYHYCYPEQYQYMVSLKKSLDEGGPCILEMPSGTGKTVSLLALISSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA-KILAIGLSSRKNLCVNS 119
L P VKL+YC+RTV E+E+ E + + NY+ LG A K L I +SSR+NLC++
Sbjct: 61 LVNP--TVKLLYCSRTVPEIEQATEEARRVLNYRNSQLGEKAPKTLCISMSSRRNLCIHP 118
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
RV VD+ CR+ T+ W R ENPN E C+FFEN+E +L GVY+L+D
Sbjct: 119 RVSEEREGKIVDSLCRELTSPWNR----ENPNSERCKFFENFEDKGKE-ILLEGVYSLED 173
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ +G + CPYFL RH++ FAN+V++SYQYLLDPK+A ++S S+VVFDEAHNI
Sbjct: 174 LKEYGLKNQMCPYFLDRHVLNFANIVIFSYQYLLDPKIASLVSSSFATNSIVVFDEAHNI 233
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG-NL 298
DNVCI ALSV++ + L+ + +N+++IN++IE K D RL+ EY+RLV+GLA G N
Sbjct: 234 DNVCINALSVNLDNKILDASLKNVTKINKQIEEIKKVDEKRLKEEYSRLVQGLARSGTNR 293
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++P LP+D+++EAVPGNIR+AEHF+ +++R++ YL+ RL+++ V E P++F+
Sbjct: 294 TEEVSADPVLPNDVIQEAVPGNIRKAEHFMSLIKRVIDYLKSRLKSQMVISESPMAFLQG 353
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +TLRFC RL SL+ TL+I D + F I I DFATLVGTY GF IIIEP
Sbjct: 354 LYHATSITSRTLRFCSARLSSLLRTLKINDINAFSGISLIADFATLVGTYNNGFLIIIEP 413
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+ +R + D + Q C DAS+ +KP+FDRF+SV+ITSGTLSP+D+Y ++LNF P V
Sbjct: 414 YYQRQNNTYDQIFQFCCLDASIGMKPIFDRFRSVIITSGTLSPLDIYTKMLNFRPKVIEK 473
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
MSL R+CICP +LTRGSDQ+ +STKFD+RSD V RNYG LLVE+ +IVPDGI+CFF
Sbjct: 474 LSMSLNRNCICPCILTRGSDQISISTKFDVRSDTAVVRNYGSLLVEVSAIVPDGIICFFT 533
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYM++I++ WN+ G+L I+ +KL+F+ET D E+ LAL NY+KACD GRGAV SVA
Sbjct: 534 SYSYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAESALALQNYKKACDSGRGAVLLSVA 593
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGK++EGIDFD YGR VI++G+P+ T SK+L ARLE+LRD +QI+E +FLTFDA+R A
Sbjct: 594 RGKISEGIDFDNQYGRCVILYGIPYINTESKVLRARLEFLRDRYQIRENEFLTFDAMRTA 653
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QCVGRVIR K+DYG+MIFADKRY+R DKR+KLP WIL ++ HLNLSTDMA+ ++++F
Sbjct: 654 SQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKLPQWILQFCQNQHLNLSTDMAISLSKQF 713
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
LR+M QP+ + +G K+L S +E
Sbjct: 714 LREMGQPFTREEQLG-KSLWSIEHIE 738
>gi|351706985|gb|EHB09904.1| TFIIH basal transcription factor complex helicase subunit, partial
[Heterocephalus glaber]
Length = 759
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/728 (55%), Positives = 538/728 (73%), Gaps = 2/728 (0%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y +
Sbjct: 2 LNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQWA 61
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++ V
Sbjct: 62 YPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVT 121
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL+A
Sbjct: 122 PLRFGKDVDGKCHSLTASYVRAQYQQDASMPHCRFYEEFDAHGRQVPLPTGIYNLDDLKA 181
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++QGWCPYFLAR+ + AN VY+Y YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 182 LGQRQGWCPYFLARYSILHANEGVYTYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 241
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPN 300
CI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A +
Sbjct: 242 CIDSMSVNLTRRTLDRCQANLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETD 301
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
A L+NP LP ++L+EAVPG+IR AEHFL LRRL+++++ RL ++V +E P +F++S+
Sbjct: 302 AHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEFIKWRLRVQHVVQESPPAFLSSLA 361
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEPFD
Sbjct: 362 QRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFD 421
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F
Sbjct: 422 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFT 481
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY
Sbjct: 482 MTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSY 541
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRG + SVARG
Sbjct: 542 QYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGPILLSVARG 601
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQ
Sbjct: 602 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQ 661
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
CVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR
Sbjct: 662 CVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLR 721
Query: 721 KMAQPYDK 728
+MAQP+ +
Sbjct: 722 QMAQPFHR 729
>gi|2058510|gb|AAB62733.1| RepD [Dictyostelium discoideum]
Length = 776
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/751 (54%), Positives = 552/751 (73%), Gaps = 14/751 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +ED+ VYFPY IYPEQYSYM+ LKR+LD G C+LEMP+GTGKT++LLSLI+SY
Sbjct: 1 MKFYIEDLLVYFPYSYIYPEQYSYMVALKRSLDNGGPCILEMPSGTGKTVSLLSLISSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA-KILAIGLSSRKNLCVNS 119
+ P +KLIYC+RTV E+E+ E + + Y+ +G + K L + +SSR+NLC+
Sbjct: 61 VKNPS--IKLIYCSRTVPEIEQATEEARRVLQYRNSEMGEESPKTLCMSMSSRRNLCIQP 118
Query: 120 RVLAAENRDS--VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
RV +E RD VDA CR+ T+SW R E+P E C+FFEN+E + +L GVY+L
Sbjct: 119 RV--SEERDGKVVDALCRELTSSWNR----ESPTSEKCKFFENFE-SNGKEILLEGVYSL 171
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL+ +G + CPYFL+RHM+ FAN+V++SYQYLLDPK+A +IS S+VVFDEAH
Sbjct: 172 EDLKEYGLKHQMCPYFLSRHMLNFANIVIFSYQYLLDPKIASLISSSFPSNSIVVFDEAH 231
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
NIDNVCI ALS+++ + L+ +++N+++IN++IE K D RL+ EY RLV GLA G+
Sbjct: 232 NIDNVCINALSINIDNKLLDTSSKNIAKINKQIEDIKKVDEKRLKDEYQRLVNGLARSGS 291
Query: 298 L-PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+ S+P LP+D+++EAVPGNIR+ F+ +LRR+V YL+ RL+++ + E P++F+
Sbjct: 292 TRADETTSDPVLPNDVIQEAVPGNIRKPSIFISLLRRVVDYLKSRLKSQMLLSESPLAFL 351
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
+ I +TLRFC RL SL+ TL I D ++F I I DFATLVGTY GF III
Sbjct: 352 QGLYHATQISSRTLRFCSSRLSSLLRTLRINDVNQFSGISLIADFATLVGTYNNGFLIII 411
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP+ +R + D + Q C DAS+ +KP+FD+++SVVITSGTLSP+D+Y ++LNF P V
Sbjct: 412 EPYYQRQNNTYDQIFQFCCLDASIGMKPIFDKYRSVVITSGTLSPLDIYTKMLNFRPTVV 471
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
MSL R+CICP +LTRGSDQ+ +STKFD+RSD V RNYG LLVE+ +IVPDGI+CF
Sbjct: 472 ERLTMSLNRNCICPCILTRGSDQISISTKFDVRSDTAVVRNYGALLVEVSAIVPDGIICF 531
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SYSYM++I++ WN+ G+L I+ +KL+F+ET D E+ LAL NY+KACD GRGAV S
Sbjct: 532 FTSYSYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAESALALQNYKKACDSGRGAVLLS 591
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD YGR VI++G+P+ T SK+L ARLE+LRD +QI+E +FLTFDA+R
Sbjct: 592 VARGKVSEGIDFDNQYGRCVILYGIPYINTESKVLRARLEFLRDRYQIRENEFLTFDAMR 651
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
A+QCVGRVIR K+DYG+MIFADKRY+R DKR+KLP WIL + HLNLSTDMA+ +++
Sbjct: 652 TASQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKLPQWILQFCQPQHLNLSTDMAISLSK 711
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLEKMT 747
FLR+M QP+ + +G K+L S +EK +
Sbjct: 712 TFLREMGQPFSREEQLG-KSLWSLEHVEKQS 741
>gi|338710190|ref|XP_001500524.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Equus caballus]
Length = 785
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/728 (55%), Positives = 538/728 (73%), Gaps = 5/728 (0%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y +
Sbjct: 31 LNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRA 90
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L N+ + G + L + LSSRKNLC++ V
Sbjct: 91 YPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLQFLGLALSSRKNLCIHPEVT 150
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL+A
Sbjct: 151 PLRFGKDVDGKCHSLTASYVRAQHQQDASLPHCRFYEEFDTHGRQVPLPSGIYNLDDLKA 210
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 211 VGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 270
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPN 300
CI+++SV++ R+TL+ NL + + + R D RLR EY RLVEGL A +
Sbjct: 271 CIDSMSVTITRRTLDRCQGNLETLQKTVLR---ADEQRLRDEYRRLVEGLREASAARETD 327
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++ +
Sbjct: 328 AHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKXRLRVQHVVQESPPAFLSGLA 387
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
I K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEPFD
Sbjct: 388 QRVCIQYKILRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFD 447
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F
Sbjct: 448 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFT 507
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY
Sbjct: 508 MTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSY 567
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARG
Sbjct: 568 QYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARG 627
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF HYGR V+MFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQ
Sbjct: 628 KVSEGIDFVHHYGRAVLMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQ 687
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
CVGR IR K DYG+MIFADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR
Sbjct: 688 CVGRAIRGKTDYGLMIFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLR 747
Query: 721 KMAQPYDK 728
+MAQP+ +
Sbjct: 748 QMAQPFHR 755
>gi|328871712|gb|EGG20082.1| transcription factor IIH component [Dictyostelium fasciculatum]
Length = 791
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/747 (54%), Positives = 550/747 (73%), Gaps = 10/747 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L+D+ VYFPY IYPEQY+YML LKR+LD G C+LEMP+GTGKT++LL+LI+SY
Sbjct: 1 MKFYLDDLLVYFPYAFIYPEQYNYMLHLKRSLDNGGPCMLEMPSGTGKTVSLLALISSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-PAAKILAIGLSSRKNLCVNS 119
+ P VKLIYC+RTV E+E+ + E + + Y+ LG A K L + +SSR+NLCV+
Sbjct: 61 VKNPN--VKLIYCSRTVPEIEQAVEEARKVLAYRNAELGDKAPKTLCMAMSSRRNLCVHP 118
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
RV + +VD+ CR T+ W+R +NP + C F EN+E + +L GVY + D
Sbjct: 119 RVSSEREGKTVDSLCRDLTSPWIR----DNPQADKCSFNENFE-SNGQEILLEGVYNIGD 173
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ FG + CPYFL+R ++ FAN+V++SYQY+LDPK+A +I+ S+VVFDEAHNI
Sbjct: 174 LKEFGLKNQMCPYFLSRRIINFANIVIFSYQYMLDPKIASLITASFDSNSIVVFDEAHNI 233
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG-NL 298
DNVCI +LSV++ + LE +RN+++I +I++ KA D RL+ EY+RL+ GLA G +
Sbjct: 234 DNVCINSLSVNIDNRILEAGSRNITKITGQIDKVKAIDEKRLKDEYSRLLGGLARTGASN 293
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +++P LP+D+++EAVPGNIR+AEH+L ++RR + YL RL ++ + E P++F+ S
Sbjct: 294 RDELMTDPVLPADVIREAVPGNIRKAEHYLSLMRRFMDYLANRLRSQTLISESPMAFLQS 353
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I+ KTLRFC +RL SL+ TL+I+D ++F I I D ATL+GTY +GF IIIEP
Sbjct: 354 LYHTTSINAKTLRFCSQRLSSLLRTLQISDINQFSGIGVIADLATLIGTYNKGFLIIIEP 413
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P+ DPV Q C DAS+ +KP+FD+F++VVITSGTLSP+D+Y ++LN P
Sbjct: 414 FDQRSPNQFDPVFQFCCLDASIGMKPIFDKFKNVVITSGTLSPLDIYTKILNIRPTTVER 473
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
MSL RD ICP +LTRGSDQ+ VSTKFD+RSD V RNYG LLVEM SIVPDGI+CFF
Sbjct: 474 LPMSLIRDSICPCILTRGSDQISVSTKFDVRSDTTVIRNYGSLLVEMSSIVPDGIICFFT 533
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYSYM++I++ WN+ G+L +++ +KL+F+ET D E+ LAL NY+KACD GRGAV SVA
Sbjct: 534 SYSYMEQIVSVWNEMGLLNKVLSNKLIFVETSDPAESALALQNYKKACDNGRGAVLLSVA 593
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI++G+P+ T S++L ARLE+LRD FQIKE +FL+FDA+R A
Sbjct: 594 RGKVSEGIDFDHHYGRCVILYGIPYINTESRVLRARLEFLRDQFQIKESEFLSFDAMRTA 653
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QCVGRVIR K DYG+MIFADKR++R DKR+KLP WI + HLNLSTDMA+ + R+F
Sbjct: 654 SQCVGRVIRGKTDYGIMIFADKRFNRLDKRNKLPQWINQSCKPEHLNLSTDMAVGLCRKF 713
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP + +G K L S D+EK
Sbjct: 714 LRDMAQPIPRNQQLG-KVLWSIKDVEK 739
>gi|219112193|ref|XP_002177848.1| xeroderma pigmentosum group D complementing protein [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217410733|gb|EEC50662.1| xeroderma pigmentosum group D complementing protein [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 782
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/760 (55%), Positives = 551/760 (72%), Gaps = 35/760 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L+ + V+FPYD IY EQ+ YM LK++LDA GHCLLEMPTGTGKT+ LLSLITSY
Sbjct: 1 MRFDLDGLDVFFPYDRIYLEQHQYMRALKQSLDAGGHCLLEMPTGTGKTVCLLSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-------------------PA 101
+ P + KL+YCTRTV EM + EL + Y+++ L P
Sbjct: 61 FANP-SAGKLVYCTRTVPEMNHVMEELATVLAYRSQELQRHQEENILPMDTDGDIENVPV 119
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFEN 160
A L LSSR+N+CV+ RV+A +R++VDAACR TASWV A + P +IETC +++N
Sbjct: 120 AGTLC--LSSRRNMCVHERVMAESDREAVDAACRSLTASWVLEEAQKRPGSIETCSYYDN 177
Query: 161 YEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGI 220
+ A + +P GVY L++L+ +GK++GWCPY+L R + AN++V++YQY+LDPKVA +
Sbjct: 178 FHAAGESTSMPSGVYDLEELQKWGKRRGWCPYYLTRQAINHANILVFNYQYMLDPKVAKM 237
Query: 221 ISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGR 280
+SKE++ ES+VVFDEAHNID+VCIEALSV++ + LE ATR+L R++ E+ R KA+D R
Sbjct: 238 VSKELEAESIVVFDEAHNIDSVCIEALSVTINDRGLEQATRSLGRLSSEVSRLKASDNQR 297
Query: 281 LRAEYNRLVEGLALRGNLP----NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQ 336
L+ EY LV GL +G L +A L++ L D+L EAVPGNIRRAEHF+ ++++V+
Sbjct: 298 LQTEYQNLVNGLIDQGLLDAPANDAGLTSNVLNPDVLNEAVPGNIRRAEHFIGFMKKVVE 357
Query: 337 YLRGRLET-----ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE 391
+L+ RL + V E P++F+ +T ++ K LRF Y RL SL+ TL++++ D+
Sbjct: 358 HLKARLRSVAGPNGGVRSETPLAFLHRMTNGTSLEAKPLRFAYSRLSSLLRTLQVSNLDD 417
Query: 392 FLHIQTICDFATLVGTYTRG---FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR 448
F + + DF++L+ Y+ G F+II+EP +P DPV+QL C D+SLA+ P+F R
Sbjct: 418 FNSLTDVADFSSLLAAYSEGVAKFAIIMEPNGSSIPGATDPVIQLVCLDSSLAIAPLFKR 477
Query: 449 FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDM 508
F SV+ITSGTLSPIDLYP+LL F P VS S MS R CI P+V+T+GSDQL VSTK++
Sbjct: 478 FGSVIITSGTLSPIDLYPKLLQFEPCVSESLSMSTFRPCIRPLVITKGSDQLAVSTKYED 537
Query: 509 RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE 568
R D GV RNYG +LVE+ S +PDG+V FF SYSYM+ +I+ W+ GIL+E+ + KLVFIE
Sbjct: 538 RGDMGVIRNYGTMLVELCSTIPDGVVAFFTSYSYMESLISEWDAIGILRELTKSKLVFIE 597
Query: 569 TQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
T+DVVETTLALDNYR+ACDCGRGAVF SVARGKV+EGI+FDRHYGR VIMFGVPFQYTLS
Sbjct: 598 TKDVVETTLALDNYRRACDCGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLS 657
Query: 629 KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
L ARLEYL+ +QI+E DFL FDA+RQA+QCVGRVIRSK DYG+MIFAD RY+RHDKR
Sbjct: 658 HTLRARLEYLQTHYQIREQDFLNFDAIRQASQCVGRVIRSKTDYGLMIFADSRYNRHDKR 717
Query: 689 SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
SKLP WI + D LNLSTDMAL ++FLR M QP D+
Sbjct: 718 SKLPKWIQQFMSDHFLNLSTDMALSHVKQFLRLMGQPIDQ 757
>gi|242024030|ref|XP_002432433.1| TFIIH basal transcription factor complex helicase subunit, putative
[Pediculus humanus corporis]
gi|212517866|gb|EEB19695.1| TFIIH basal transcription factor complex helicase subunit, putative
[Pediculus humanus corporis]
Length = 747
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/751 (52%), Positives = 546/751 (72%), Gaps = 19/751 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQY+YM+ELK+ LDAKGHCLLEMP+GTGKT LLSL+ SY+
Sbjct: 1 MKLCVDGLLVYFPYDYIYPEQYAYMIELKKGLDAKGHCLLEMPSGTGKTTTLLSLVVSYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L+ P + KLIYC+RTV E+EK + EL+LL Y + G A K+L + R+ V+ R
Sbjct: 61 LTYPLDVTKLIYCSRTVPEIEKVVEELRLLFKYIEQETGKATKMLGLVSKEREGKVVDGR 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
C TAS++R N ++ C+F+E ++ + PG Y++ D+
Sbjct: 121 -------------CHSLTASYIREQHRYNKSVPICDFYEGFDCFGREDSVMPGAYSIDDI 167
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ + + +G+CPYFLARH++ AN++VYSY YLLDPK+A ++SKE+ K +VVVFDEAHNID
Sbjct: 168 KNYAQTKGYCPYFLARHLIAQANIIVYSYHYLLDPKIANVVSKELTKTAVVVFDEAHNID 227
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG--NL 298
NVCI+++SV + R+T++ +T+ + R+ + I K +DA +L+ EYNRLV GL G
Sbjct: 228 NVCIDSMSVKIHRRTIDKSTQAIQRLEKNIAEIKESDANKLKEEYNRLVAGLREAGIARE 287
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP +IL E++PGNIR AEHF+ L+R V+YL+ RL ++V +E P SF+
Sbjct: 288 TDLILANPVLPEEILTESIPGNIRNAEHFISFLKRFVEYLKTRLRVQHVVQESPASFLKD 347
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLEI D +F + + ATLV TYT+GF+IIIEP
Sbjct: 348 VYGKVCIERKPLRFCAERLSSLLRTLEIADHTDFTSLVLVTHLATLVSTYTKGFTIIIEP 407
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P +P+P+L SC D+S+A+KPVFDRFQSVVITSGTLSP+D+YP++L+FHPV+ S
Sbjct: 408 FDDKAPTVPNPILHFSCLDSSIAMKPVFDRFQSVVITSGTLSPLDMYPKILDFHPVIMAS 467
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S++F+ R D V RNYG+LLVE+ S+VPDG+VCFF
Sbjct: 468 FTMTLARPCLLPMIVSKGNDQVAISSRFETREDVAVVRNYGQLLVEISSVVPDGVVCFFT 527
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D G+L + +HKL+FIETQD ET+LAL NY KAC+ GRGAV SVA
Sbjct: 528 SYLYLESVVASWYDQGVLNNLQKHKLLFIETQDAAETSLALLNYIKACESGRGAVLLSVA 587
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 588 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILRARLDYLRDQFQIRENDFLTFDAMRHA 647
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SR+DKR KLP WI HL+D NLST+ A+H+ + +
Sbjct: 648 AQCVGRALRGKTDYGIMIFADKRFSRNDKRGKLPKWIQEHLKDNLCNLSTEEAVHMCKIW 707
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQ + K +G +S LE++ N+
Sbjct: 708 LRQMAQDFTKKDQLG----VSLLTLEQLNNE 734
>gi|91079234|ref|XP_970844.1| PREDICTED: similar to Xeroderma pigmentosum D CG9433-PA [Tribolium
castaneum]
gi|270003570|gb|EFA00018.1| hypothetical protein TcasGA2_TC002825 [Tribolium castaneum]
Length = 759
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/750 (52%), Positives = 544/750 (72%), Gaps = 6/750 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQY+YM ELKRALDAKGHCLLEMP+GTGKT +LSL+ +Y+
Sbjct: 1 MKLNVDGLIVYFPYDYIYPEQYAYMCELKRALDAKGHCLLEMPSGTGKTTTILSLVVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P + KLIYC+RTV E+EK + ELK L Y + G +L + LSSRKNLC++
Sbjct: 61 LEHPHDVRKLIYCSRTVPEIEKVMEELKKLLEYYEKLDGEYPHLLGLVLSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS++R + C+++E + + +P GVY++ DL
Sbjct: 121 VSTEREGKIVDGKCHALTASYIRERHNYDDTTPICQYYEGFALDGKESTMPFGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFL+R ++ +AN+VVYSY YLLDPK+A ++SKE+ +ESVV+FDEAHNID
Sbjct: 181 KQYGRDRNWCPYFLSRFVISYANIVVYSYHYLLDPKIAEVVSKELTRESVVIFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + ++ ++ A+ N+ + + + + D +L+ EY RLVEGL A
Sbjct: 241 NVCIDSMSVKINKRIIDRASANIQLLERTVAEMREDDHKKLQEEYQRLVEGLRDASVARD 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP IL+EAVPGNIR AEHF+ L+R ++YL+ RL ++V +E P F+
Sbjct: 301 TDVILANPVLPDAILQEAVPGNIRNAEHFVSFLKRFLEYLKTRLRVQHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLEI+D +F + + ATLV TYT+GF+II+EP
Sbjct: 361 VQSKVCIERKPLRFCAERLASLLRTLEISDLTDFSPVILVTHLATLVATYTKGFTIIVEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P + +P+L SC D+S+A+KPVFDRFQ+VVITSGTLSP+D+YP++LNFHPV+ S
Sbjct: 421 FDDKTPTVSNPILHFSCLDSSIAIKPVFDRFQTVVITSGTLSPLDMYPKILNFHPVIMSS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ + VPDGIVCFF
Sbjct: 481 FTMTLARPCLLPMIVSKGNDQVAISSKFETREDNAVIRNYGQLLVEIAANVPDGIVCFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D G++ + ++KL+FIETQD ET+ AL Y KAC+ GRGAV SVA
Sbjct: 541 SYLYLESVVASWYDQGVIDSLQRYKLLFIETQDSAETSFALMYYIKACESGRGAVLLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 601 RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+MIFADKR+SR DKRSKLP WI HL+D+ NLST+ A+ IA+ +
Sbjct: 661 AQCVGRAIRGKTDYGIMIFADKRFSRSDKRSKLPKWIQEHLKDSLTNLSTEEAVQIAKRW 720
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
LR+MAQP+ + +G +S LE++ N
Sbjct: 721 LRQMAQPFTREDQLG----VSLLTLEQLQN 746
>gi|323456743|gb|EGB12609.1| hypothetical protein AURANDRAFT_51952 [Aureococcus anophagefferens]
Length = 760
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/732 (56%), Positives = 543/732 (74%), Gaps = 10/732 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F+L+++ V+FPYD +YPEQ++Y+ ELK+ALDA+GH LLEMPTGTGKT LL+LIT+Y
Sbjct: 1 MRFQLDELDVFFPYDALYPEQFTYICELKKALDAEGHALLEMPTGTGKTACLLTLITAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK---ILAIGLSSRKNLCV 117
+ PE KLIYCTRTV EMEK LAELK L Y+ G A LA+ LSSR+N+CV
Sbjct: 61 YAHPEMG-KLIYCTRTVPEMEKCLAELKRLRAYRDAQRGVGASKAPFLALCLSSRRNMCV 119
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+ RV+ +RD VD CRK TASW R+ + E C FFE +++A + A +P GVY +
Sbjct: 120 HERVVRDADRDRVDVECRKMTASWARS----RDDAEKCPFFEAWDEAGTEAEVPDGVYDV 175
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
DLR GK +GWCPYFLARH + ANV+VY+YQY+LDPKVAG++S+E++ ESVVVFDE H
Sbjct: 176 DDLRVLGKAKGWCPYFLARHAIAHANVIVYNYQYMLDPKVAGLVSRELEAESVVVFDEGH 235
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
NIDN+CIEALSV + + L+ A R ++R+ + ++ +A+DAGR+RAEY+RLV GL G+
Sbjct: 236 NIDNICIEALSVELDARRLDQAQRCVARLARSVDALRASDAGRVRAEYDRLVSGLRAAGS 295
Query: 298 LPNAWL--SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
LP L ++P LP D+L EAVPGN+R+AEHFL +LR LV +L+ +L V E P +F
Sbjct: 296 LPGDELGGASPVLPQDVLDEAVPGNVRKAEHFLRLLRVLVLHLKKKLAGTRVAVESPAAF 355
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + G+D K L+F + RLH L+ T+E ++ + + +FA++V TY GFS++
Sbjct: 356 LLGLQQATGLDAKPLKFFHTRLHQLLRTVEAAGLEDSAALGDVANFASIVSTYDDGFSVV 415
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+P +P L L+C DASLA+KPV +RF+SVVITSGTLSP++LYP+LLNF PVV
Sbjct: 416 ADPTSRGPSGLPQARLDLACLDASLAIKPVLERFRSVVITSGTLSPLELYPKLLNFSPVV 475
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
S +MS+ R CI P+V+T+G+DQ PVST+F+ R D V RN+G+LL + VPDG+V
Sbjct: 476 RESLQMSIFRPCILPLVVTKGADQQPVSTRFESRDDASVVRNFGQLLAGLCGDVPDGMVV 535
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SYSYM+ + TW++ G+L+++ +HKL+F+ET+DVVETT+ALDN+R+ACD GRGAVF
Sbjct: 536 FFPSYSYMERTVTTWDELGVLRKVAEHKLLFVETKDVVETTIALDNFRRACDTGRGAVFL 595
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
S+ARGKVAEGIDFDRHYGR V+ GVPFQYT S +L RLEYL F I+E DFL+FDAL
Sbjct: 596 SIARGKVAEGIDFDRHYGRCVLNVGVPFQYTQSPVLRTRLEYLLSKFAIREADFLSFDAL 655
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
RQ AQCVGRVIRSK DYG++I AD R++RHDKRSKLPGW+ + DA+LNLS+D AL I
Sbjct: 656 RQTAQCVGRVIRSKTDYGIVILADARFARHDKRSKLPGWVQQFMTDANLNLSSDAALAIT 715
Query: 716 REFLRKMAQPYD 727
R FL++MAQP D
Sbjct: 716 RTFLKQMAQPID 727
>gi|194754721|ref|XP_001959643.1| GF11940 [Drosophila ananassae]
gi|190620941|gb|EDV36465.1| GF11940 [Drosophila ananassae]
Length = 770
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/751 (52%), Positives = 545/751 (72%), Gaps = 4/751 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY+YMLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y+
Sbjct: 1 MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE KLIYC+RTV E+EK +AEL+ L Y R+ + LSSRKN+C++
Sbjct: 61 VEYPETVRKLIYCSRTVPEIEKVIAELQNLMAYYERNCPNPPPFTGLVLSSRKNMCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD C TAS++R + C+++E + + LP GVY++ DL
Sbjct: 121 VSKEREGKAVDGKCYGLTASYIRDRHEMDSETPICQYYEGFTLEGKESTLPVGVYSIDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G+ + WCPYFLAR+ + A++VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNID
Sbjct: 181 KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMTRESCVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV + R+T+E +T L+++ + ++ + D RL EY R+V+GL A
Sbjct: 241 NVCIDSMSVKINRRTVERSTNALNQLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP+D+L E VPGNIR A+HFL LRR ++Y++ RL +V +E P F+
Sbjct: 301 TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I++ I++K LRFC ERL SL+ TLEI+D E+ + I FATLV TYT+GF+III+
Sbjct: 361 ISSKICIERKPLRFCAERLSSLLRTLEISDMTEYGALTLITHFATLVSTYTKGFTIIID- 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
D++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV S
Sbjct: 420 LDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDGIVCFF
Sbjct: 480 FTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +VA
Sbjct: 540 SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R A
Sbjct: 600 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+MIFADKR+SR DKRS+LP WI HL D+ NLST+ A+ +AR +
Sbjct: 660 AQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW 719
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
LR+MAQP+ + +G +LL+ + LE M +
Sbjct: 720 LRRMAQPFTREDQLG-ISLLTLSQLENMEQE 749
>gi|344269323|ref|XP_003406502.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Loxodonta africana]
Length = 845
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/733 (54%), Positives = 535/733 (72%), Gaps = 5/733 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 83 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 142
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 143 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 202
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ L G+Y L DL
Sbjct: 203 VTPLRFGKDVDGKCHSLTASYVRAQYQQDSSLPHCSFYEEFDTHGRQVPLSAGIYNLDDL 262
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 263 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 322
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 323 NVCIDSMSVNITRRTLDRCQGNLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE 382
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 383 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 442
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 443 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 502
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 503 FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 562
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 563 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 622
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++ + GRG + S A
Sbjct: 623 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEGWEKGRGGIPVSSA 682
Query: 599 RGKVAEGIDF---DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
RGK++EG +F HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+
Sbjct: 683 RGKMSEGNEFWEGVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAM 742
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A
Sbjct: 743 RHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVA 802
Query: 716 REFLRKMAQPYDK 728
+ FLR+MAQP+ +
Sbjct: 803 KYFLRQMAQPFHR 815
>gi|449664165|ref|XP_002163452.2| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Hydra magnipapillata]
Length = 759
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/739 (52%), Positives = 528/739 (71%), Gaps = 2/739 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FP+D IYPEQYSYMLELKR LDAKGHCLLEMP+GTGKT++L+SLI +Y+
Sbjct: 1 MKLNIDGLLVLFPHDFIYPEQYSYMLELKRTLDAKGHCLLEMPSGTGKTVSLISLIVAYI 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+P + K +YC+RTV E+EK LL + + G K++ + LSSRKNLC++
Sbjct: 61 KERPHHLSKFVYCSRTVPEIEKVYNFXXLLIEFYKKETGQDLKMVGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VD C TAS+VR + C+F+EN++ LP G+Y L+DL
Sbjct: 121 VKNLKDGKQVDGKCHTLTASFVRTRYQADKQTPVCQFYENFDSFGREEPLPSGIYNLEDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +G++ G CPYF+ARH + AN+VVYSY YLLDPK+A ++SK K S VVFDEAHNID
Sbjct: 181 KQYGEEIGCCPYFMARHAISLANIVVYSYHYLLDPKIADLVSKSFPKSSAVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI++++V + R+TL+ N+ ++ + ++R K TDA +L EY RLV+GL A
Sbjct: 241 NVCIDSMTVHINRRTLDKCHSNIDKLAEHVQRIKMTDAKKLNGEYERLVQGLREAQEARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +L NP LP +L+EAVPGNIR+AEHF+ +RR V+YL+ RL ++V E P SF+
Sbjct: 301 TDQYLGNPVLPDAVLEEAVPGNIRQAEHFIAFMRRFVEYLKTRLRIQHVVSETPPSFLQH 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I I++K LRFC ERL SL+ TLE+ D ++ + + +FATLV TY++GF +IIEP
Sbjct: 361 IHQQVCIERKPLRFCSERLRSLLNTLELPDITDYSGLSLVANFATLVSTYSKGFVLIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD++ P IP+P++ C DAS+A+KPVF+RFQSVVITSGTLSP+D+YP+LL+F PV +
Sbjct: 421 FDDQTPTIPNPIIHFCCLDASVAIKPVFERFQSVVITSGTLSPVDMYPKLLDFQPVNMST 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+ P++ ++G+DQ+ +S+ F R D V RNYG LLVEM + VPDGI CFFV
Sbjct: 481 FTMTLARQCVLPIICSKGNDQVAISSSFQTRDDMAVIRNYGNLLVEMSASVPDGIACFFV 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +++ W+D GI+ I ++KL+FIETQD ET LAL NY+KAC+ GRGA+ SVA
Sbjct: 541 SYLYMETVVSIWHDQGIISNIQKNKLLFIETQDGPETALALYNYQKACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VIMFG+P+ YT S+IL ARLE+LRD F I+E DFLTFDA+R A
Sbjct: 601 RGKVSEGIDFDHHYGRAVIMFGIPYVYTQSRILKARLEFLRDQFNIRENDFLTFDAMRHA 660
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR +R K DYG+M FADKR+S+ DK+ KLP WI HL+ + NLS D A+ +++ F
Sbjct: 661 AQCVGRAMRGKTDYGIMCFADKRFSKADKKGKLPKWIQEHLKPCNCNLSIDEAVQVSKRF 720
Query: 719 LRKMAQPYDKAGSIGRKTL 737
LR+MAQP+ +G L
Sbjct: 721 LRQMAQPFSHEDQLGMSLL 739
>gi|358057423|dbj|GAA96772.1| hypothetical protein E5Q_03443 [Mixia osmundae IAM 14324]
Length = 797
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/731 (54%), Positives = 536/731 (73%), Gaps = 4/731 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++ + V FPYD IYPEQY+Y+ +LKR LDA G+C+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDQLPVIFPYDRIYPEQYAYVCDLKRTLDAGGNCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KL+YC+RTV E+EK LAELK L Y+ +A+GLSSRKNLC++
Sbjct: 61 QHYPERR-KLVYCSRTVPEIEKALAELKRLMEYRRAAGCNDDGFMALGLSSRKNLCIHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPGVYTLQD 179
+ + DA CR T++WV +P ++E CEF EN + LPP VYTL+D
Sbjct: 120 ISREKKGKVADAKCRDLTSAWVCEKGRADPGSVELCEFHENLGQLEPGTQLPPAVYTLED 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
++A+G+QQG CPYF R M+ A+VV+YS+ YLLDPKVA +SKEM K+++VVFDEAHNI
Sbjct: 180 VKAYGEQQGICPYFAVRRMLVHASVVIYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGN 297
DNVCIE+LS+ + R L+ A R+++ + +I+ + TDA +L+ EY RLVEGL A
Sbjct: 240 DNVCIESLSIDLTRPMLDSAARSVTALTDKIKEIRQTDATKLQDEYARLVEGLQGAEADQ 299
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
NA++ NP LP DIL EAVPGNIRRAEHF+ L R V+YL+ R+ +V E P SF+
Sbjct: 300 DENAFMGNPVLPDDILNEAVPGNIRRAEHFVAFLARFVEYLKTRMRVLHVVAEKPASFLQ 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ I++K LRFC ERL SL+ TLE+T DEF + + FATLV TY +GF +I+E
Sbjct: 360 HLKDITFIEKKPLRFCAERLTSLVRTLELTRIDEFSALSKVASFATLVATYDKGFLLILE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
PF+ +P+P+ L C DASLA+KPVFDRF SVVITSGT+SP+++YP++L F V
Sbjct: 420 PFETENATVPNPIFHLCCLDASLAIKPVFDRFSSVVITSGTISPLEMYPKMLQFTATVQE 479
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
S+ M+LTR+C P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E VPDG+VCFF
Sbjct: 480 SYAMTLTRNCFLPLVITRGSDQVNISSRFEVRNDPAVVRNFGTILIEYAKAVPDGMVCFF 539
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+ I+A W+D GIL E +HKL+F+ET D ET++AL+NYR+ACD GRGAV SV
Sbjct: 540 PSYLYMESIVAAWHDMGILNEAWKHKLIFVETPDAAETSVALENYRRACDNGRGAVLLSV 599
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDFD HYGR VIMFG+P+QYT S+IL ARLE+LRD +I+E D+LTFDA+R
Sbjct: 600 ARGKVSEGIDFDHHYGRCVIMFGIPYQYTESRILKARLEFLRDEHRIRENDYLTFDAMRH 659
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AAQCVGRV+R K DYG+M+FAD+R+++ DKR+KLP WI ++ D NLSTDMAL +++
Sbjct: 660 AAQCVGRVLRGKTDYGLMVFADRRFAKADKRAKLPKWINHYITDTASNLSTDMALVMSKN 719
Query: 718 FLRKMAQPYDK 728
FLR+MAQP+++
Sbjct: 720 FLRQMAQPFEQ 730
>gi|195123085|ref|XP_002006040.1| GI20811 [Drosophila mojavensis]
gi|193911108|gb|EDW09975.1| GI20811 [Drosophila mojavensis]
Length = 745
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/727 (53%), Positives = 532/727 (73%), Gaps = 3/727 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
MLELKR+LDAKGHCLLEMP+GTGKT LLSL+ +Y++ PE KLIYC+RTV E+EK +
Sbjct: 1 MLELKRSLDAKGHCLLEMPSGTGKTATLLSLVVAYMIEHPETVRKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AEL+ L Y R+ A + LSSRKNLC++ V +VD C TAS++R
Sbjct: 61 AELQNLMAYYERNAPVAPGFTGLVLSSRKNLCIHPEVSKEREGKAVDGKCYGLTASYIRE 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+P + C++FE + + LP GVY++ DL+ +G+ + WCPYFLAR+ + A++
Sbjct: 121 RHELDPEVPICQYFEGFTLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHI 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNIDNVCI+++SV + R+T+E +T L+
Sbjct: 181 VVYSYHYLLDPKIAQVVSKEMTRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALN 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
++ + ++ + D RL EY R+V+GL A + L+NP LP+D+L E VPGNIR
Sbjct: 241 QLTKLVQEMREEDTNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A+HFL LRR ++Y++ RL +V +E P F+ +++ I++K LRFC ERL SL+
Sbjct: 301 NADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDVSSKICIERKPLRFCAERLSSLLR 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEITD EF + I FATLV TYT+GF+IIIEPFD++ P + +P++ SC D+S+A+
Sbjct: 361 TLEITDMTEFGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPIMHFSCLDSSIAM 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
PVF RFQ+VVITSGTLSP+D+YP++L+F PVV SF M+L R C+ PM++++G+DQ+ +
Sbjct: 421 APVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVAI 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG+LLVE+ VPDGIVCFF SY Y++ ++A+W D GI+ ++++
Sbjct: 481 SSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRY 540
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET+ AL NY KACDCGRGAV +VARGKV+EG+DFD HYGR V+MFG+P
Sbjct: 541 KLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIP 600
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+
Sbjct: 601 YVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRF 660
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SR DKRS+LP WI HL D+ NLST+ A+ +AR +LR+MAQP+ + +G +LL+ A
Sbjct: 661 SRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRWLRRMAQPFSREDQLG-ISLLTLAQ 719
Query: 743 LEKMTND 749
LE M +
Sbjct: 720 LETMEQE 726
>gi|307210249|gb|EFN86899.1| TFIIH basal transcription factor complex helicase subunit
[Harpegnathos saltator]
Length = 735
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/723 (54%), Positives = 524/723 (72%), Gaps = 3/723 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
MLELKR LDAKGHCLLEMP+GTGKTI LLSLI +Y+L P N KLIYC+RTV E+EK +
Sbjct: 1 MLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYMLEYPLNVTKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
ELK L +Y KI+ + LSSRKN+C++ V VD C TAS+VR
Sbjct: 61 EELKKLIDYYETETKSKPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHSLTASYVRE 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ + C F+E ++ ++PPG+Y+L DL+ +GK +GWCPYFLAR + A +
Sbjct: 121 RHNHDESTPICNFYEGFDMEGREQIVPPGIYSLDDLKDYGKDRGWCPYFLARFTILHAQI 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A +SKE+ K SVVVFDEAHNIDNVCI+++SV + ++ +E +T N+
Sbjct: 181 VVYSYHYLLDPKIAETVSKELSKSSVVVFDEAHNIDNVCIDSMSVKINKKLMERSTNNIQ 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + + + D +L+ EY+RLV GL A + L+NP LP +IL+E VPGNIR
Sbjct: 241 LLEKTVAEMRDCDVNKLKEEYDRLVAGLRDAQLARETDVILANPVLPDEILEEIVPGNIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
AEHF+ L+R V+YL+ RL ++V +E P +F+ I A I++K LRFC +RL SL+
Sbjct: 301 NAEHFVSFLKRFVEYLKTRLRVQHVMQESPAAFLRDIQAKVSIERKPLRFCAQRLASLLR 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
T+EITD +F I + ATLV TYT GF+II+EPFD++ P + +P+L SC D+S+A+
Sbjct: 361 TMEITDMTDFSPIILVTHLATLVSTYTHGFTIIVEPFDDKTPTVLNPILHFSCLDSSIAI 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KP+FDRFQSV+ITSGTLSP+D+YP++LNFHPV+ SF M+L R C+ PM++ +G+DQ+ +
Sbjct: 421 KPIFDRFQSVIITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCLLPMIVAKGNDQVAI 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+K++ R D V RNYG+LLVE + VPDG+VCFF SY YM+ ++A W D G++ ++ +H
Sbjct: 481 SSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVAAWYDQGVVDQLQRH 540
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET+LAL NY KAC+ GRGAV SVARGKV+EG+DFD H GR V+MFG+P
Sbjct: 541 KLLFIETQDSAETSLALINYIKACENGRGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIP 600
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FADKR+
Sbjct: 601 YVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGIMVFADKRF 660
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SR DKRSKLP WI HL D NLST+ A+ I++ +LR+MAQP+ + +G +LL++
Sbjct: 661 SRVDKRSKLPKWIQEHLTDNFCNLSTEEAIQISKRWLRQMAQPFTRENQLGL-SLLTREQ 719
Query: 743 LEK 745
LEK
Sbjct: 720 LEK 722
>gi|312370938|gb|EFR19235.1| hypothetical protein AND_22844 [Anopheles darlingi]
Length = 807
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/796 (50%), Positives = 542/796 (68%), Gaps = 52/796 (6%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ + VYFPY+ IYPEQY+YMLELKR DAKGHCLLEMP+GTGKT LLSL +Y+L P
Sbjct: 3 VDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLTVAYILENP 62
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
KLIYC+RTV E+EK +AELK L NY + G I + LSSRKN+C++ V
Sbjct: 63 HIVRKLIYCSRTVPEIEKVIAELKHLMNYYEKQTGTMPNITGLVLSSRKNMCIHPEVSRE 122
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
VDA C TAS+VR AA + C+++E ++ ++LPPGVY++ DL+ FG
Sbjct: 123 REGKIVDARCYGMTASYVRERAAHDETAPVCQYYEGFQAEGKESMLPPGVYSIDDLKEFG 182
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
+++ WCPYFL+R + A+VVVYSY YLLDPKVA ++SKE+ +ESVVV DEAHNIDNVC+
Sbjct: 183 RERNWCPYFLSRFAINQAHVVVYSYYYLLDPKVAEVVSKELTRESVVVCDEAHNIDNVCV 242
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAW 302
+++SV + ++ +E +T + + Q+I K D RL EY RLV+GL A +
Sbjct: 243 DSMSVKINKRLIERSTTGIHNLEQKISELKEDDKRRLNDEYTRLVQGLKDASFARETDMV 302
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
++NP LP++IL+E VPGNIR A+HFL L+R ++Y++ RL ++V +E P F+ +
Sbjct: 303 VANPVLPNEILREVVPGNIRNADHFLSFLKRFIEYIKSRLRVQHVVQESPAGFLRDVQRQ 362
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER 422
I++K LRFC +RL SL+ TLEITD E+ + I FATLV TYT+GF+IIIEPFD++
Sbjct: 363 VCIERKPLRFCADRLQSLLRTLEITDLSEYGPLSVITSFATLVSTYTKGFTIIIEPFDDK 422
Query: 423 MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
P +P+P+L SC D+S+A+KP+F RFQSVVITSGTLSP+D+YP++L+F PVV SF M+
Sbjct: 423 TPTVPNPILHFSCLDSSIAMKPIFQRFQSVVITSGTLSPMDMYPKILDFEPVVMSSFTMT 482
Query: 483 LTRDCICPMV------------------------LTRGSDQLPVSTKFDMRSDPGVARNY 518
L R C+ PMV + RG+DQ+ +S++F+ R D V RNY
Sbjct: 483 LARPCLLPMVGSFHLLRYSVLVLTINCICSPHQIVARGNDQVAISSRFETREDTAVTRNY 542
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G+LLVE VPDGIVCFF SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ A
Sbjct: 543 GQLLVETAKTVPDGIVCFFTSYLYLESVVASWYDQGIIDTLLRYKLLFIETQDNAETSYA 602
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L NY KAC+CGRGAV +VARGKV+EG+DFD H GR V+MFG+P+ YT S+IL ARL+YL
Sbjct: 603 LMNYVKACECGRGAVLLAVARGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYL 662
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
RD FQI+E DFLTFDALR AAQCVGR IR K DYG+MIFADKR+SR DKR KLP WI H
Sbjct: 663 RDQFQIRENDFLTFDALRHAAQCVGRAIRGKTDYGIMIFADKRFSRQDKRGKLPKWIQEH 722
Query: 699 LRDAHLNLSTD-------------------------MALHIAREFLRKMAQPYDKAGSIG 733
L D NLST+ + L +A+ +LR+MAQP+ + +G
Sbjct: 723 LTDNLSNLSTEESMQVGSMHRSLATSPHGFNIPICFVVLQLAKRWLRQMAQPFTREDQLG 782
Query: 734 RKTLLSQADLEKMTND 749
+LL+ L+ M +
Sbjct: 783 -VSLLTLEQLQSMERE 797
>gi|17137232|ref|NP_477178.1| xeroderma pigmentosum D, isoform B [Drosophila melanogaster]
gi|281363902|ref|NP_001163231.1| xeroderma pigmentosum D, isoform C [Drosophila melanogaster]
gi|4928442|gb|AAD33587.1|AF132140_1 excision repair protein ERCC2/XPD [Drosophila melanogaster]
gi|7291258|gb|AAF46689.1| xeroderma pigmentosum D, isoform B [Drosophila melanogaster]
gi|220945966|gb|ACL85526.1| Xpd-PB [synthetic construct]
gi|272432602|gb|ACZ94503.1| xeroderma pigmentosum D, isoform C [Drosophila melanogaster]
Length = 745
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/727 (53%), Positives = 529/727 (72%), Gaps = 3/727 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
MLELKR+LDAKGHCLLEMP+GTGKT LLSLI +Y++ PE KLIYC+RTV E+EK +
Sbjct: 1 MLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AEL+ L Y RH + LSSRKN+C++ V +VD C TAS++R
Sbjct: 61 AELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRE 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ C++FE + + LP GVY++ DL+ +G+ + WCPYFLAR+ + A++
Sbjct: 121 RHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHI 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNIDNVCI+++SV + R+T+E +T L+
Sbjct: 181 VVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALN 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + ++ + D RL EY R+V+GL A + L+NP LP+D+L E VPGNIR
Sbjct: 241 HLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A+HFL LRR ++Y++ RL +V +E P F+ I++ I++K LRFC ERL SL+
Sbjct: 301 NADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDISSKICIERKPLRFCAERLSSLLR 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEI+D E+ + I FATLV TYT+GF+IIIEPFD++ P + +P+L SC D+S+A+
Sbjct: 361 TLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAM 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
PVF RFQ+VVITSGTLSP+D+YP++L+F PVV SF M+L R C+ PM++++G+DQ+ +
Sbjct: 421 APVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTI 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG+LLVE+ VPDGIVCFF SY Y++ ++A+W D GI+ ++++
Sbjct: 481 SSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRY 540
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET+ AL NY KACDCGRGAV +VARGKV+EG+DFD HYGR V+MFG+P
Sbjct: 541 KLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIP 600
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+
Sbjct: 601 YVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRF 660
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SRHDKRS+LP WI HL D+ NLST+ A+ +AR +LR+MAQP+ + +G +LL+ A
Sbjct: 661 SRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRWLRRMAQPFTREDQLG-ISLLTLAQ 719
Query: 743 LEKMTND 749
LE M +
Sbjct: 720 LENMEQE 726
>gi|21322260|gb|AAM45142.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D) [Homo
sapiens]
Length = 736
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/706 (55%), Positives = 522/706 (73%), Gaps = 2/706 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y + P KLIYC+RTV E+EK +
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L N+ + G L + LSSRKNLC++ V VD C TAS+VRA
Sbjct: 61 EELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRA 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ ++ C F+E ++ LP G+Y L DL+A G++QGWCPYFLAR+ + ANV
Sbjct: 121 QYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANV 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+ NL
Sbjct: 181 VVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLE 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG+IR
Sbjct: 241 TLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL SL+
Sbjct: 301 TAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLH 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DASLA+
Sbjct: 361 TLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAI 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ+ +
Sbjct: 421 KPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAI 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I ++
Sbjct: 481 SSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRN 540
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMFGVP
Sbjct: 541 KLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVP 600
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FADKR+
Sbjct: 601 YVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRF 660
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
+R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 661 ARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 706
>gi|21961619|gb|AAH34517.1| Ercc2 protein [Mus musculus]
Length = 739
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/730 (54%), Positives = 527/730 (72%), Gaps = 23/730 (3%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAY- 59
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
++ + EL+ L ++ + G L + LSSRKNLC++
Sbjct: 60 --------------------QRVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 99
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 100 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDIHGRQMPLPAGIYNLDDL 159
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G +QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 160 KALGHRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 219
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 220 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE 279
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 280 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 339
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 340 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 399
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 400 FDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 459
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 460 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 519
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 520 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 579
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 580 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 639
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL D++LNL+ D + +A+ F
Sbjct: 640 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF 699
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 700 LRQMAQPFHR 709
>gi|343425212|emb|CBQ68748.1| probable RAD3-DNA helicase/ATPase [Sporisorium reilianum SRZ2]
Length = 847
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/781 (51%), Positives = 547/781 (70%), Gaps = 40/781 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL---------------------- 98
L P KLIYC+RTV E+EK LAELK L Y+ R+
Sbjct: 61 LFHPAKR-KLIYCSRTVPEIEKALAELKRLMEYRARYNVKEGEESEVLKNEAEGSNGPGE 119
Query: 99 ------------GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
G ILA+GLSSRKNLC++ V VDA CR T+SW
Sbjct: 120 HNVEMKGKGKAGGQMEDILALGLSSRKNLCIHPDVSRERKGKVVDARCRDMTSSWACEKG 179
Query: 147 AENPN-IETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
++P +E C+F E K ++P GV TL++++ + + +G CPYF R M+ F +++
Sbjct: 180 RQDPGTVELCDFHEKLGKMEPGQLIPQGVRTLEEVKEYARDKGICPYFAIRRMLPFVDII 239
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+YS+ YLLDPK+A +SKEM K+++VVFDEAHNIDNVCIE+LS+ + R L+ A R++++
Sbjct: 240 IYSFHYLLDPKIAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAYRSINQ 299
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRR 323
+++ ++ K TDA +L+ EY RLVEGL +G A +++NP LP D+L+EAVPGNIRR
Sbjct: 300 LSEHVDEIKKTDASKLQDEYARLVEGLQEQGEQREAESFMANPVLPDDLLQEAVPGNIRR 359
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF+ L+R V+YL+ R+ +V E P SF+ + I++K LRFC ERL L+ T
Sbjct: 360 AEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPLRFCAERLRMLVST 419
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LE+T DEF +Q + FATLV TY +GF +I+EPF+ +P+P+ +C DASLA+
Sbjct: 420 LELTRLDEFSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPIFHFTCLDASLAIA 479
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PVF+RF SV+ITSGT+SP+D+YP++L F +V S+ M+LTR C P+V+TRGSDQ+ +S
Sbjct: 480 PVFERFSSVIITSGTISPLDMYPKMLKFDAIVQESYAMTLTRQCFLPLVITRGSDQVAIS 539
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
++F++R+DP V RNYG +L+E VPDGIV FF SY YM+ I+A W+D GIL E+ ++K
Sbjct: 540 SRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVAAWHDMGILDEVWKYK 599
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+FIET D ET++AL+NYR+ACD GRGA+ SVARGKV+EGIDFD +YGR VIMFGVP+
Sbjct: 600 LIFIETPDAPETSIALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPY 659
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
QYT S+IL ARLE+LRD F+I+E DFLTFDA+R AAQCVGRV+R K DYG+M+FADKR++
Sbjct: 660 QYTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFA 719
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADL 743
R DKR+KLP WI ++++ H NLSTDMA+ ++ F+R MAQPY + G G +L AD+
Sbjct: 720 RADKRNKLPKWIAQYIKETHSNLSTDMAIVESKLFIRSMAQPYPE-GKNG-VSLWELADI 777
Query: 744 E 744
E
Sbjct: 778 E 778
>gi|395333451|gb|EJF65828.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 796
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/753 (52%), Positives = 543/753 (72%), Gaps = 12/753 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPYD IYPEQY+YM +LKR LDA GHCLLEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ------TRHLGPAAKILAIGLSSRKN 114
P KLIYC+RTV E+EK L+EL+ L +Y+ IGL+SRKN
Sbjct: 61 QFYPTKR-KLIYCSRTVPEIEKALSELQRLMDYRRDCAETDEQREKEKNFYGIGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T S V ENP ++E C++ EN K ++PPG
Sbjct: 120 LCIHPEVSKEKKGKVVDARCRDLTNSAVCTKGRENPGSVELCDWHENLGKLEPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ G++ CPYFL R M+ F +V++YS+ YLLDPKVA +SKE+ K+++VVF
Sbjct: 180 IWTLADVLQHGRENKICPYFLVRRMMPFVDVIIYSFHYLLDPKVAEQVSKELTKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R++ ++ +I+ K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVVKLGDKIDEIKKTDASKLQDEYAKLVEGLQ 299
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
N +A++SNP LP D+LKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E P+
Sbjct: 300 EASNDEDAFVSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPL 359
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
SF+ + I+++ LRFC ERL SL+ TLE++ DE +Q + FATLV TY +GF
Sbjct: 360 SFLQHLKDITYIERRPLRFCAERLQSLVRTLELSRLDELSSLQKVASFATLVATYEKGFL 419
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
+I+EPF+ +P+P+ L+C D S+A+KPVF+RF SVVITSGTLSP+D+YP++L F P
Sbjct: 420 LILEPFETDNATVPNPIFHLTCLDPSIAIKPVFERFSSVVITSGTLSPLDMYPKMLQFTP 479
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
VV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVPDGI
Sbjct: 480 VVQETYSMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGI 539
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAV 593
V FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+ACD GRGAV
Sbjct: 540 VAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGAV 599
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD 653
SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL FD
Sbjct: 600 LLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGFD 659
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALH 713
A+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMAL
Sbjct: 660 AMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMALT 719
Query: 714 IAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
++++F+R ++Q P + I TL D+EK
Sbjct: 720 LSKQFMRMISQNPNENQTGISLWTL---EDIEK 749
>gi|443898496|dbj|GAC75831.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, 5'-3' helicase subunit RAD3
[Pseudozyma antarctica T-34]
Length = 851
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/781 (51%), Positives = 550/781 (70%), Gaps = 40/781 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++L SLI SY
Sbjct: 1 MKFYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLFSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL------------------GPA- 101
L P KLIYC+RTV E+EK LAELK L Y+ R+ GPA
Sbjct: 61 LFHPAK-RKLIYCSRTVPEIEKALAELKRLMEYRARYNVPEGEESHVAKSDADGTNGPAD 119
Query: 102 ---------------AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
ILA+GLSSRKNLC++ V VDA CR T+SW
Sbjct: 120 DDIEMKGRGKAGGQMEDILALGLSSRKNLCIHPDVGRERKGKVVDARCRDMTSSWACEKG 179
Query: 147 AENP-NIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
++P +++ C+F E K ++P GV+TL++++ + + +G CPYF R M+ F +++
Sbjct: 180 RQDPGSVQLCDFHEELGKMEPGQLIPQGVWTLEEVKEYARVKGICPYFAIRRMIPFVDII 239
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
VYS+ YLLDPK+A +SKEM K+++VVFDEAHNIDNVCIE+LS+ + R L+ A R++++
Sbjct: 240 VYSFHYLLDPKIAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAYRSINQ 299
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRR 323
+++ ++ K TDA +L+ EY RLVEGL +G A +++NP LP D+L+EAVPGNIRR
Sbjct: 300 LSERVDEIKRTDASKLQDEYARLVEGLQEQGEQREAESFMANPVLPDDLLQEAVPGNIRR 359
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF+ L+R V+YL+ R+ +V E P SF+ + I++K LRFC ERL L+ T
Sbjct: 360 AEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPLRFCAERLRMLVGT 419
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LE+T DE+ +Q + FATLV TY +GF +I+EPF+ +P+P+ +C DASLA+
Sbjct: 420 LELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPIFHFTCLDASLAIA 479
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PVF+RF SV+ITSGT+SP+D+YP++L F +V S+ M+LTR C P+V+TRGSDQ+ +S
Sbjct: 480 PVFERFSSVIITSGTISPLDMYPKMLKFDAIVQESYAMTLTRQCFLPLVITRGSDQVAIS 539
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
++F++R+DP V RNYG +L+E VPDGIV FF SY YM+ I+A W+D GIL E+ ++K
Sbjct: 540 SRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVAAWHDMGILDEVWKYK 599
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+FIET D ET++AL+NYR+ACD GRGA+ SVARGKV+EGIDFD +YGR VIMFGVP+
Sbjct: 600 LIFIETPDAPETSIALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPY 659
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
QYT S+IL ARLE+LRD F+I+E DFLTFDA+R AAQCVGRV+R K DYG+M+FADKR++
Sbjct: 660 QYTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFA 719
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADL 743
R DKR+KLP WI ++++ H NLSTDMA+ ++ F+R MAQPY + G G +L AD+
Sbjct: 720 RADKRNKLPKWIAQYIKETHSNLSTDMAIVESKLFIRSMAQPYPE-GKNG-VSLWELADI 777
Query: 744 E 744
E
Sbjct: 778 E 778
>gi|71020135|ref|XP_760298.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
gi|46100007|gb|EAK85240.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
Length = 850
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/781 (51%), Positives = 548/781 (70%), Gaps = 40/781 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRH-------LGPAAK---------- 103
P KLIYC+RTV E+EK LAELK L Y+ R+ G K
Sbjct: 61 QFHPAKR-KLIYCSRTVPEIEKALAELKRLMEYRARYNVQQDQASGVLKKESQSSDRPGE 119
Query: 104 -----------------ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
ILA+GLSSRKNLC++ V VDA CR T+SW
Sbjct: 120 HNIEMNGKGNTGSQMEDILALGLSSRKNLCIHPDVSRERKGKVVDARCRDMTSSWACEKG 179
Query: 147 AENP-NIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
++P ++E C F E K ++P GV+TL++++ + +++ CPYF R M+ F +++
Sbjct: 180 RQDPGSVELCNFHEELGKMEPGQLIPQGVWTLEEVKEYAREKAICPYFAIRRMMPFVDII 239
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+YS+ YLLDPKVA +SKEM K+++VVFDEAHNIDNVCIE+LS+ + R L+ A R++++
Sbjct: 240 IYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAYRSINQ 299
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRR 323
+++ ++ K TDA +L+ EY RLVEGL +G A +++NP LP D+L+EAVPGNIRR
Sbjct: 300 LSERVDEIKKTDASKLQDEYARLVEGLQQQGEQREAESFMANPVLPDDLLQEAVPGNIRR 359
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF+ L+R V+YL+ R+ +V E P SF+ + I++K LRFC ERL L+ T
Sbjct: 360 AEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPLRFCAERLRMLVGT 419
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LE+T DEF +Q + FATLV TY +GF +I+EPF+ +P+P+ +C DASLA+
Sbjct: 420 LELTRLDEFSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPIFHFTCLDASLAIA 479
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PVF+RF SV+ITSGT+SP+D+YP++L F +V S+ M+LTR C P+V+TRGSDQ+ +S
Sbjct: 480 PVFERFSSVIITSGTISPLDMYPKMLKFDAIVQESYAMTLTRQCFLPLVITRGSDQVAIS 539
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
++F++R+DP V RNYG +L+E VPDGIV FF SY YM+ I+A W+D GIL E+ ++K
Sbjct: 540 SRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVAAWHDMGILDEVWKYK 599
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+FIET D ET++AL+NYR+ACD GRGA+ SVARGKV+EGIDFD +YGR VIMFGVP+
Sbjct: 600 LIFIETPDAPETSIALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPY 659
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
QYT S+IL ARLE+LRD F+I+E DFLTFDA+R AAQCVGRV+R K DYG+M+FADKR++
Sbjct: 660 QYTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFA 719
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADL 743
R DKR+KLP WI ++++ H NLSTDMA+ ++ F+R MAQPY + G G +L AD+
Sbjct: 720 RADKRNKLPKWIAQYIKETHSNLSTDMAIVESKLFIRSMAQPYPE-GKNG-VSLWELADI 777
Query: 744 E 744
E
Sbjct: 778 E 778
>gi|389748846|gb|EIM90023.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/752 (52%), Positives = 542/752 (72%), Gaps = 10/752 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK------ILAIGLSSRKN 114
P KLIYC+RTV E+EK LAEL+ L Y+ + + IGL+SRKN
Sbjct: 61 QFFPTKR-KLIYCSRTVPEIEKALAELRRLMEYRISQAETEEQRVKEQGFMGIGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T S NP +++ C+F E + ++PPG
Sbjct: 120 LCIHPEVSKEKKGKVVDARCRDMTNSAACQKGRANPGSVDLCDFHEKLGEREPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +G+QQG CPYF R M+ F ++V+YS+ YLLDPKVA +SKEM K+S+VVF
Sbjct: 180 IWTLADVMDYGRQQGTCPYFTVRRMLPFVDIVIYSFHYLLDPKVAEQVSKEMSKDSIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R+++++ +I+ K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVNKLGDKIDEIKKTDASKLQDEYAKLVEGLQ 299
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
+ +A++SNP LP D+L EA+PGNIR+AEHF+ L+R V+YL+ R+ +V E P+
Sbjct: 300 DAASDEDAFMSNPVLPEDLLNEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPL 359
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
SF+ + I+++ LRFC ERL SL+ TLEI DEF +Q + FATLV TY +GF
Sbjct: 360 SFLQHLKDITYIERRPLRFCAERLQSLVKTLEINRLDEFSALQKVASFATLVSTYEKGFL 419
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
+I+EPF+ +P+P+ +C D ++A+KPVF+RF SVVITSGT+SP+D+YP++L F P
Sbjct: 420 LILEPFETDNATVPNPIFHFTCLDPAIAIKPVFERFSSVVITSGTISPLDMYPKMLQFTP 479
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
VV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +LVE IVPDGI
Sbjct: 480 VVQETYAMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGI 539
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAV 593
V FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+ACD GRGAV
Sbjct: 540 VAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGAV 599
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD 653
SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL FD
Sbjct: 600 LLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGFD 659
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALH 713
A+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMAL
Sbjct: 660 AMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETAANLSTDMALT 719
Query: 714 IAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
+++ F+R ++Q ++ +L ++ D+EK
Sbjct: 720 LSKLFMRTISQSV--GDNLTGVSLWTKEDVEK 749
>gi|431909160|gb|ELK12750.1| TFIIH basal transcription factor complex helicase subunit [Pteropus
alecto]
Length = 736
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/706 (55%), Positives = 523/706 (74%), Gaps = 2/706 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
MLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y + P KLIYC+RTV E+EK +
Sbjct: 1 MLELKRTLDAKGHGILEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L ++ + G + L + LSSRKNLC++ V VD C TAS+VRA
Sbjct: 61 EELRKLLSFYEKQEGEKLQFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRA 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++ ++ C F+E ++ LP G+Y L DL+A G++QGWCPYFLAR+ + ANV
Sbjct: 121 QYQQDHSLPHCRFYEEFDIHGRQVPLPAGIYNLDDLKAMGRRQGWCPYFLARYSILHANV 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+ NL
Sbjct: 181 VVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLE 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG+IR
Sbjct: 241 TLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
AEHFL LRRL++Y++ RL +++ +E P +F++ + I +K LRFC ERL SL+
Sbjct: 301 TAEHFLGFLRRLLEYVKWRLRAQHMVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLH 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEI D +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DASLA+
Sbjct: 361 TLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTITNPILHFSCMDASLAI 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ+ +
Sbjct: 421 KPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVTI 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
++KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I ++
Sbjct: 481 TSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRN 540
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF H+GR VIMFGVP
Sbjct: 541 KLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVP 600
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FADKR+
Sbjct: 601 YVYTQSRILKARLEYLRDQFQIREKDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRF 660
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
+ DKR KLP WI HL D++LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 661 TSADKRGKLPRWIQEHLSDSNLNLTVDEGVQVAKYFLRQMAQPFHR 706
>gi|240976653|ref|XP_002402458.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
gi|215491179|gb|EEC00820.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
Length = 758
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/743 (52%), Positives = 541/743 (72%), Gaps = 8/743 (1%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ +TV+FPY+ IYPEQYSYMLELK+ LDAKGH +LEMP+GTGKT+ LLSLI SY+ + P
Sbjct: 6 VDGLTVFFPYEYIYPEQYSYMLELKQCLDAKGHGVLEMPSGTGKTVTLLSLILSYIKANP 65
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
KLIYC+RT+ E+EK + EL+ L + + G +L + LSSRKNLC++ V
Sbjct: 66 AMVSKLIYCSRTLPEIEKVVEELRRLLKHYHKETGEDMNVLGLCLSSRKNLCIHPEVSKE 125
Query: 125 ENRDSVDAACRKRTAS-WVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
+ VD C TA ++R + + +N++ +LP GVY+L DL+ +
Sbjct: 126 RDGHVVDGKCYLLTAPIYIRKSYRWDVVVTFRPVLQNFDAHGREFILPTGVYSLDDLKEY 185
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G + +CPYF AR V A VVVYSY YLLDPK+A ++SKEM + SVV+FDEAHNIDNVC
Sbjct: 186 GMEHQYCPYFTARQAVLHATVVVYSYHYLLDPKIADLVSKEMTRSSVVIFDEAHNIDNVC 245
Query: 244 IEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNA 301
IE++SV + ++T++G++ N+ + Q I+ K DA +L+ EY RLVEGL A +A
Sbjct: 246 IESMSVRINKRTIDGSSENIDTLEQTIKELKEQDAEKLKDEYERLVEGLRDANVARETDA 305
Query: 302 WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITA 361
L+NP LP ++L+EAVPGNIR AEHF+ LRRL++Y++ RL ++V +E P +F+ I
Sbjct: 306 ILANPILPDEVLQEAVPGNIRLAEHFVAFLRRLLEYVKMRLRVQHVVQESPAAFLRDILH 365
Query: 362 HAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDE 421
I++K LRFC ER+ S++ TLEI D F + +C FATLV TYT+GF++I+EP+D+
Sbjct: 366 KVCIERKPLRFCSERMRSMVKTLEIADPTNFSAVIKLCSFATLVSTYTKGFTLIVEPYDD 425
Query: 422 RMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKM 481
R P +P+PVL LSC DAS+A+KPVF+RFQSV+ITSGTLSP+D+YP++L+F PV+S SF +
Sbjct: 426 RTPGVPNPVLNLSCMDASIAIKPVFNRFQSVIITSGTLSPVDMYPKILDFRPVISASFTI 485
Query: 482 SLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYS 541
+L R ICPM++++G+DQ+ +++KF+ R D V RNYG LLVE+ S VPDG+VCFF SY
Sbjct: 486 TLARPSICPMIVSKGNDQVAMTSKFETRDDIAVVRNYGTLLVEVASSVPDGVVCFFTSYM 545
Query: 542 YMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGK 601
Y++ ++A+W + G++ +I + KL+FIETQD ET+LAL NY KAC+ GRGAV SVARGK
Sbjct: 546 YLEGVVASWYEQGVIDQIQRRKLLFIETQDAAETSLALVNYIKACENGRGAVLLSVARGK 605
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQC 661
V+EG+DF G+ V+MFG+PF YT S+IL ARLEYLRD +QI+E DFLTFDA+R AAQC
Sbjct: 606 VSEGVDF----GKAVLMFGIPFVYTQSRILRARLEYLRDQYQIRENDFLTFDAMRHAAQC 661
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
VGR +R K DYG+MIFADKR++R DKRSKLP WI +L+D+ NLS + A+ + R FL++
Sbjct: 662 VGRALRGKTDYGIMIFADKRFARWDKRSKLPRWIQEYLKDSLCNLSIEEAMQVVRRFLKQ 721
Query: 722 MAQPYDKAGSIGRKTLLSQADLE 744
MAQP+ + +G +LL+ LE
Sbjct: 722 MAQPFTREDQLGL-SLLTAEQLE 743
>gi|164662899|ref|XP_001732571.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
gi|159106474|gb|EDP45357.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
Length = 837
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/769 (52%), Positives = 543/769 (70%), Gaps = 29/769 (3%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQYSYM++LKR LD KGH +LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYSYMVDLKRTLDVKGHGVLEMPSGTGKTVSLLSLIISYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRH--------------------LGP 100
P KL+YC+RTV E+EK LAELK L Y+ ++ G
Sbjct: 61 RFYP-GSRKLVYCSRTVSEIEKALAELKRLMAYRAKYNTKKQLSDGIEPMDVDSEDIQGQ 119
Query: 101 AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFE 159
ILA+GLSSRKN+CV+ V VDA CR T++W ++P ++E C+F E
Sbjct: 120 MEDILALGLSSRKNMCVHPTVSQERKGKVVDARCRDMTSAWACEKGRQDPGSVELCDFHE 179
Query: 160 NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAG 219
K ++PPGV+T+++L + K +G CPYF R M+ F ++++YS+ YLLDPKVA
Sbjct: 180 ELGKLEPGHLVPPGVWTIEELIEYSKDKGICPYFAVRRMMPFCDIIIYSFHYLLDPKVAE 239
Query: 220 IISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAG 279
+SKE+ K+++VVFDEAHNIDNVCIE+LS+ + R L+ A R ++++ +++ K D+
Sbjct: 240 QVSKEISKDAIVVFDEAHNIDNVCIESLSIDLTRPILDNAYRCVNQLADKVDEVKKVDSA 299
Query: 280 RLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY 337
RL+ EY RLVEGL + + A +++NP LP D+L+EA+PGNIRRAEHF+ LRR V+Y
Sbjct: 300 RLQDEYVRLVEGLQQQSDDREAESFMANPVLPDDLLQEAIPGNIRRAEHFVAFLRRFVEY 359
Query: 338 LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
L+ R+ +V E P SF+ + I++K LRFC ERL L+ TLE+T DE+ +QT
Sbjct: 360 LKTRMRVLHVVAETPASFLQHLKEITFIERKPLRFCAERLRMLVQTLELTRLDEYSALQT 419
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
+ FATLV TY +GF +I+EPF+ +P+P+ +C DASLA+ PVF+RF SV+ITSG
Sbjct: 420 VAFFATLVSTYDKGFLLILEPFETEQATVPNPIFHFTCLDASLAIAPVFERFSSVIITSG 479
Query: 458 TLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARN 517
T+SP+D+YP++L F VV S+ M+LTR C P+V+TRGSDQ+ +S++F++R+DP V RN
Sbjct: 480 TISPLDMYPKMLRFDTVVQESYTMTLTRQCFLPLVITRGSDQVAISSRFEVRNDPSVVRN 539
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTL 577
YG +L+E +PDGIV FF SY YM+ I+A W+D GIL E+ +HKLVFIET D ET++
Sbjct: 540 YGNILIEYSRCIPDGIVAFFPSYLYMESIVAAWHDMGILDEVWRHKLVFIETPDAPETSI 599
Query: 578 ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
AL+NYR+ACD GRGA+ SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLE+
Sbjct: 600 ALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEF 659
Query: 638 LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
LRD F+IKE DFLTFDA+R AAQCVGRV+R K+DYG+MIFADKR++R DKR+KLP WI
Sbjct: 660 LRDNFRIKENDFLTFDAMRHAAQCVGRVLRGKSDYGLMIFADKRFARSDKRAKLPKWIAQ 719
Query: 698 HLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
++ NLSTDMA+ ++ F+R M QPY AG G +S DLE +
Sbjct: 720 YIEPVFSNLSTDMAIVESKRFMRTMGQPY-PAGKNG----ISLWDLEDI 763
>gi|302681585|ref|XP_003030474.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune H4-8]
gi|300104165|gb|EFI95571.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune H4-8]
Length = 792
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/767 (51%), Positives = 543/767 (70%), Gaps = 15/767 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFNIDDLPIVFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR------HLGPAAKILAIGLSSRKN 114
P KLIYC+RTV E+EK LAELK L Y+ + +GL+SRKN
Sbjct: 61 QFYPTK-RKLIYCSRTVPEIEKALAELKRLMAYRIQCAETPEQRAKEEAFTGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T + V +P ++E CE+ EN + ++PPG
Sbjct: 120 LCIHPEVSKEKKGVVVDARCRDLTNAVVCEKGRADPGSVELCEWHENLGQREPGQLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +G+ CPYFL R M+ F +VV+YS+ YLLDPKVA +SKE+ K+++VVF
Sbjct: 180 IWTLADVLQYGRDNTICPYFLVRRMMPFVDVVIYSFHYLLDPKVADQVSKELSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R++ ++ ++IE K TDA +L+ EY RLVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVGKLGEKIEEIKTTDAAKLQDEYARLVEGLQ 299
Query: 294 LRGNLPN---AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKE 350
+ P+ ++SNP LP D+L EAVPGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 EASDRPDDADGFMSNPLLPDDLLNEAVPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAE 359
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTR 410
P+SF+ + I+++ LRFC ERL SL+ TLE++ DE+ +Q + FATLV TY R
Sbjct: 360 TPLSFLQHLKDITYIERRPLRFCAERLQSLIRTLELSRLDEYSALQKVASFATLVSTYER 419
Query: 411 GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN 470
GF +I+EPF+ +P+P+ +C D SLA++PVF+RF SVVITSGT+SP+D+YP++L
Sbjct: 420 GFILILEPFETDNATVPNPIFHFACLDPSLAIQPVFERFSSVVITSGTISPLDMYPKMLQ 479
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
F PVV S+ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVP
Sbjct: 480 FTPVVQESYPMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVP 539
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
DGIV FF SY YM+ I+A WND GIL E+ HKL+F+ET D ET++AL+NYR+ACD GR
Sbjct: 540 DGIVAFFPSYLYMESIVAAWNDMGILNEVWNHKLIFVETPDSNETSIALENYRRACDNGR 599
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL 650
GAV SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 600 GAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFL 659
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDM 710
+FDA+R AAQCVGRV+R K D+G+M+FADKR+ R DKRSKLP WI ++ + NLSTDM
Sbjct: 660 SFDAIRNAAQCVGRVLRGKTDWGLMVFADKRFGRSDKRSKLPRWINQYITETASNLSTDM 719
Query: 711 ALHIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEKMTNDGSINEML 756
A+ +++ F+R ++Q P + I TL D+EK + M+
Sbjct: 720 AITLSKIFMRTISQNPNENQTGISLWTL---EDIEKAQAKQKMESMM 763
>gi|388855689|emb|CCF50677.1| probable RAD3-DNA helicase/ATPase [Ustilago hordei]
Length = 847
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/763 (51%), Positives = 540/763 (70%), Gaps = 38/763 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFYIDELPVLFPYPRIYPEQYAYMADLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRH----------------------- 97
P KLIYC+RTV E+EK LAELK L Y+ R+
Sbjct: 61 QFHPAKR-KLIYCSRTVPEIEKALAELKRLMEYRARYNLKQGQQSQVLRNQAEQGNAPSE 119
Query: 98 -------LGPAA----KILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
G A ILA+GLSSRKNLC++ V VDA CR T+SW
Sbjct: 120 HHIQMEGRGKAGAQMQDILALGLSSRKNLCIHPDVSRERKGKVVDARCRDMTSSWACEKG 179
Query: 147 AENP-NIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
++P ++E C+F E ++PPGV+TL++++ + + + CPYF R M+ F +++
Sbjct: 180 RQDPGSVELCDFHEELGNMEPGQLIPPGVWTLEEVKEYARDKRICPYFAVRRMIPFVDII 239
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+YS+ YLLDPKVA +SKEM K+++V+FDEAHNIDNVCIE+LS+ + R L+ A R++++
Sbjct: 240 IYSFHYLLDPKVAEQVSKEMSKDAIVIFDEAHNIDNVCIESLSIDLTRPMLDSAYRSINQ 299
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRR 323
+++ +++ K TDA +L+ EY RLV+GL +G+ A +++NP LP D+L EA+PGNIRR
Sbjct: 300 LSERVDQIKKTDASKLQDEYARLVQGLQEQGDQREAETFMANPVLPDDLLSEAIPGNIRR 359
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF+ L+R V+YL+ R+ +V E P SF+ + I++K LRFC ERL L+ T
Sbjct: 360 AEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPLRFCAERLRMLVGT 419
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LE+T DE+ +Q + FATLV TY +GF +I+EPF+ +P+P+ +C DASLA+
Sbjct: 420 LELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPIFHFTCLDASLAIA 479
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PVF+RF SV+ITSGT+SP+D+YP++L F ++ S+ M+LTR C P+V+TRGSDQ+ +S
Sbjct: 480 PVFERFSSVIITSGTISPLDMYPKMLKFDAIIQESYAMTLTRQCFLPLVITRGSDQVAIS 539
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
++F++R+DP V RNYG +L+E VPDGIV FF SY YM+ I+A W+D GIL ++ ++K
Sbjct: 540 SRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVAAWHDMGILDQVWKYK 599
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+FIET D ET++AL+NYR+ACD GRGA+ SVARGKV+EGIDFD +YGR VIMFGVP+
Sbjct: 600 LIFIETPDAPETSIALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPY 659
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
QYT S+IL ARLE+LRD F+I+E DFLTFDA+R AAQCVGRV+R K DYG+M+FADKR++
Sbjct: 660 QYTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFA 719
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY 726
R DKR+KLP WI ++++ H NLSTDMA+ ++ F+R MAQPY
Sbjct: 720 RADKRNKLPKWIAQYIKETHSNLSTDMAVVESKLFIRSMAQPY 762
>gi|19113937|ref|NP_593025.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe 972h-]
gi|1709995|sp|P26659.2|RAD15_SCHPO RecName: Full=DNA repair helicase rad15; AltName: Full=Protein
rhp3; AltName: Full=RAD3 homolog
gi|1177345|emb|CAA93221.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe]
Length = 772
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/735 (52%), Positives = 532/735 (72%), Gaps = 3/735 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY YM +LK +LDA G LLEMP+GTGKTI+LLSLI SY
Sbjct: 1 MKFYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E++K LAELK L Y+T LG L +GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIDKALAELKRLMAYRTSQLGYEEPFLGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +N + VDA CR TA +VR ++ TCEF +N E +++ GV+TL D+
Sbjct: 120 VRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNGVWTLDDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF R M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 TEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A++++ + Q++ K +D+ +L+ EY +LV GL A N
Sbjct: 240 NVCIESLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQDANAAND 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +++NP LP D+LKEAVPGNIRRAEHF+ L+R V+YL+ R++ +V E P SF+
Sbjct: 300 EDQFMANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ ID+K LRFC ERL SL+ L+I+ ++F +Q + FATLV TY RGF +I+EP
Sbjct: 360 VKDITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L+ SC DAS+A+KPVF+RF+SV+ITSGTLSP+D+YP++L F+ V+ S
Sbjct: 420 FETENATVPNPILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKMLQFNTVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ MSL R+C PMV+TRGSDQ+ +S+KF+ R+DP V RNYG +LVE I PDG+V FF
Sbjct: 480 YGMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVAFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ I+++W GIL E+ ++KL+ +ET D ETTLAL+ YR AC GRGAV SVA
Sbjct: 540 SYLYLESIVSSWQSMGILDEVWKYKLILVETPDPHETTLALETYRAACSNGRGAVLLSVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR VIMFG+P+QYT S++L ARLE+LRDT+QI+E DFLTFDA+R A
Sbjct: 600 RGKVSEGVDFDHHYGRAVIMFGIPYQYTESRVLKARLEFLRDTYQIREADFLTFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K D+G+M+ ADKRY R DKR+KLP WI ++ + NLSTDM+L +A++F
Sbjct: 660 AQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYITEGATNLSTDMSLALAKKF 719
Query: 719 LRKMAQPYDKAGSIG 733
LR MAQP+ + G
Sbjct: 720 LRTMAQPFTASDQEG 734
>gi|5044|emb|CAA45870.1| rhp3+ [Schizosaccharomyces pombe]
Length = 772
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/735 (52%), Positives = 532/735 (72%), Gaps = 3/735 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY YM +LK +LDA G LLEMP+GTGKTI+LLSLI SY
Sbjct: 1 MKFYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E++K LAELK L Y+T LG L +GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIDKALAELKRLMAYRTSQLGYEEPFLGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +N + VDA CR TA +VR ++ TCEF +N E +++ GV+TL D+
Sbjct: 120 VRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNGVWTLDDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF R M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 TEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELNKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A++++ + Q++ K +D+ +L+ EY +LV GL A N
Sbjct: 240 NVCIESLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQDANAAND 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +++NP LP D+LKEAVPGNIRRAEHF+ L+R V+YL+ R++ +V E P SF+
Sbjct: 300 EDQFMANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ ID+K LRFC ERL SL+ L+I+ ++F +Q + FATLV TY RGF +I+EP
Sbjct: 360 VKDITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L+ SC DAS+A+KPVF+RF+SV+ITSGTLSP+D+YP++L F+ V+ S
Sbjct: 420 FETENATVPNPILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKMLQFNTVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ MSL R+C PMV+TRGSDQ+ +S+KF+ R+DP V RNYG +LVE I PDG+V FF
Sbjct: 480 YGMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVAFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ I+++W GIL E+ ++KL+ +ET D ETTLAL+ YR AC GRGAV SVA
Sbjct: 540 SYLYLESIVSSWQSMGILDEVWKYKLILVETPDPHETTLALETYRAACSNGRGAVLLSVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR VIMFG+P+QYT S++L ARLE+LRDT+QI+E DFLTFDA+R A
Sbjct: 600 RGKVSEGVDFDHHYGRAVIMFGIPYQYTESRVLKARLEFLRDTYQIREADFLTFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K D+G+M+ ADKRY R DKR+KLP WI ++ + NLSTDM+L +A++F
Sbjct: 660 AQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYITEGATNLSTDMSLALAKKF 719
Query: 719 LRKMAQPYDKAGSIG 733
LR MAQP+ + G
Sbjct: 720 LRTMAQPFTASDQEG 734
>gi|5022|emb|CAA43022.1| rad15 [Schizosaccharomyces pombe]
Length = 772
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/735 (52%), Positives = 532/735 (72%), Gaps = 3/735 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY YM +LK +LDA G LLEMP+GTGKTI+LLSLI SY
Sbjct: 1 MKFYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E++K LAELK L Y+T LG L +GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIDKALAELKRLMAYRTSQLGYEEPFLGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +N + VDA CR TA +VR ++ TCEF +N E +++ GV+TL D+
Sbjct: 120 VRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNGVWTLDDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF R M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 TEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A++++ + Q++ K +D+ +L+ EY +LV GL A N
Sbjct: 240 NVCIESLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQDANAAND 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +++NP LP D+LKEAVPGNIRRAEHF+ L+R V+YL+ R++ +V E P SF+
Sbjct: 300 EDQFMANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ ID+K LRFC ERL SL+ L+I+ ++F +Q + FATLV TY RGF +I+EP
Sbjct: 360 VKDITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L+ SC DAS+A+KPVF+RF+SV+ITSGTLSP+D+YP++L F+ V+ S
Sbjct: 420 FETENATVPNPILRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKMLQFNTVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ MSL R+C PMV+TRGSDQ+ +S+KF+ R+DP V RNYG +LVE I PDG+V FF
Sbjct: 480 YGMSLARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVAFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ I+++W GIL E+ ++KL+ +ET D ETTLAL+ YR AC GRGAV SVA
Sbjct: 540 SYLYLESIVSSWQSMGILDEVWKYKLILVETPDPHETTLALETYRAACTNGRGAVLLSVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR VIMFG+P+QYT S++L ARLE+LRDT+QI+E DFLTFDA+R A
Sbjct: 600 RGKVSEGVDFDHHYGRAVIMFGIPYQYTESRVLKARLEFLRDTYQIREADFLTFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K D+G+M+ ADKRY R DKR+KLP WI ++ + NLSTDM+L +A++F
Sbjct: 660 AQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYITEGATNLSTDMSLALAKKF 719
Query: 719 LRKMAQPYDKAGSIG 733
LR MAQP+ + G
Sbjct: 720 LRTMAQPFTASDQEG 734
>gi|449547579|gb|EMD38547.1| hypothetical protein CERSUDRAFT_113726 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/753 (52%), Positives = 543/753 (72%), Gaps = 12/753 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFHIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ------TRHLGPAAKILAIGLSSRKN 114
P N KLIYC+RTV E+EK LAELK L +Y+ +GL+SRKN
Sbjct: 61 QFYP-NKRKLIYCSRTVPEIEKALAELKRLMDYRMTCAETEEEKAKEQNFYGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T S V +NP ++E C++ EN + ++PPG
Sbjct: 120 LCLHPEVSKEKKGRVVDARCRDLTNSAVCEKGRQNPGSVELCDWHENLGQMEPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +G+ + CPYFL R M+ F +V++YS+ YLLDPKVA +S+E+ K+++VVF
Sbjct: 180 IWTLADVLQYGRDKRVCPYFLVRRMMPFVDVIIYSFHYLLDPKVAEQVSREVSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R++ R+ ++IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVGRLGEKIEEIKKTDASKLQDEYAKLVEGLQ 299
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
+++++NP LP D+LKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E P+
Sbjct: 300 EASQDEDSFMANPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPL 359
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
SF+ + I+++ LRFC ERL SL+ TLE+ DE +Q + FATLV TY +GF
Sbjct: 360 SFLQHLKDITYIERRPLRFCAERLQSLVRTLELNRLDELSALQKVAGFATLVATYEKGFL 419
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
+I+EPF+ +P+P+ L+C D ++A+KPVF+RF +VVITSGT+SP+D+YP++L F P
Sbjct: 420 LILEPFETDNATVPNPIFHLTCLDPAIAIKPVFERFSTVVITSGTISPLDMYPKMLQFTP 479
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
VV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +LVE IVPDGI
Sbjct: 480 VVQETYSMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGI 539
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAV 593
V FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+ACD GRGAV
Sbjct: 540 VAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGAV 599
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD 653
SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL FD
Sbjct: 600 LLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGFD 659
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALH 713
A+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMAL
Sbjct: 660 AMRTAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMALT 719
Query: 714 IAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
+++ F+R ++Q P + I TL D+EK
Sbjct: 720 LSKLFMRTISQNPNENQTGISLWTL---EDIEK 749
>gi|391325164|ref|XP_003737109.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Metaseiulus
occidentalis]
Length = 762
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/760 (50%), Positives = 544/760 (71%), Gaps = 13/760 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPYD IYPEQYSYMLELK+ LDAKGH +LEMP+GTGKT LLSLI +Y
Sbjct: 1 MKVNVDGLEVLFPYDFIYPEQYSYMLELKQCLDAKGHGVLEMPSGTGKTATLLSLILAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRH--LGPAAKILAIGLSSRKNLCVN 118
+ P KL+YC+RT+ E+EK + E++ L Y + + + IL + L+SRKNLC++
Sbjct: 61 KAYPSVISKLVYCSRTMPEIEKVVEEVRRLREYYKKEAFISSSNDILGLCLTSRKNLCLH 120
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
+ ++ VDA C T+++ R E ETC FFE+++ +LPPGVY +
Sbjct: 121 PAISEEKDGRVVDAKCYAFTSAYKRGEEGE----ETCTFFESFDTHGREMLLPPGVYGID 176
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DL+ +G++ WCPYF ARH + ANVV+YSY YLLDPK+A I+SKE+ SVVVFDEAHN
Sbjct: 177 DLKEYGQRHHWCPYFTARHAIMHANVVIYSYHYLLDPKIADIVSKELNSNSVVVFDEAHN 236
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRG 296
IDNVCI+++SV++ ++ ++ NL + + + TDA +L+ EY +LV+GL A +
Sbjct: 237 IDNVCIDSMSVTISKKMMDVINANLVVVENRVRHIRQTDASQLQEEYQKLVDGLRVAQQA 296
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+ + NP LP ++L+EA+PG+IR AEHF LRRL +Y++ R+ T++V +E P +F+
Sbjct: 297 RETDIIMPNPVLPDEVLQEAIPGSIRTAEHFTAFLRRLYEYVKHRMRTQHVVQESPAAFL 356
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
I I++K LRFC ERL SL+ +LEI+D F + +C FATL+ TYT+GF++II
Sbjct: 357 KDICKQVCIERKPLRFCAERLSSLLRSLEISDVANFSPLVRMCHFATLISTYTKGFTLII 416
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP+D+R P+IP+ LQLSC DAS+A++PVF RFQSV+ITSGTLSP+++YP++LNFHP+V
Sbjct: 417 EPYDDRTPNIPNCTLQLSCMDASIAIRPVFHRFQSVIITSGTLSPLEMYPKILNFHPIVM 476
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
SF M+L R ICP+V+++G+DQ+ +S++++ R D V RNYG L+VEM ++VPDG+V F
Sbjct: 477 ASFTMTLARPSICPIVISKGNDQVAISSRYENRDDIAVIRNYGNLIVEMSAVVPDGLVVF 536
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY Y++ ++A W + GI+ +I++ KL+FIETQD ET+LAL +Y KA + GRGAV S
Sbjct: 537 FTSYQYLENVVALWYEQGIVDQILRKKLLFIETQDSAETSLALLHYVKAVESGRGAVLLS 596
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EG+DFD H GR V+MFG+P+ +T S++L ARLEYLRD FQIKE +FLTFDA+R
Sbjct: 597 VARGKVSEGVDFDHHLGRAVLMFGIPYVFTQSRVLRARLEYLRDQFQIKEQEFLTFDAMR 656
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQCVGR +R K DYG+M+FADKR+SR+DK+ KLP WI +L D+ NLST+ + + +
Sbjct: 657 HAAQCVGRALRGKTDYGVMVFADKRFSRYDKKXKLPRWIQEYLTDSLCNLSTEEGVQVVK 716
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEML 756
+FLR+MAQP+ + +G L E+ ND ++ L
Sbjct: 717 KFLRQMAQPFSREDQLGISLL-----TEEQLNDPEVHRKL 751
>gi|290983090|ref|XP_002674262.1| DNA repair helicase UVH6 [Naegleria gruberi]
gi|284087851|gb|EFC41518.1| DNA repair helicase UVH6 [Naegleria gruberi]
Length = 753
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/717 (55%), Positives = 514/717 (71%), Gaps = 34/717 (4%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKTI+LLSLITSY L++ KLIYCTRTV EMEK L EL L Y+ ++
Sbjct: 1 MPSGTGKTISLLSLITSYQLTEEGKSRKLIYCTRTVPEMEKVLEELGSLIEYRKKYTD-- 58
Query: 102 AKILAIGLSSRKNLCVNSRVLA-AENRDSVDAACRKRTASWVRALAAE------------ 148
+ I+ +GLSSRKNLC++ + + + VD+ CR TASW+RA A E
Sbjct: 59 SPIIGVGLSSRKNLCIHPKSQSFLHDGAQVDSVCRGLTASWLRAEAKEKVESSNGTIQPV 118
Query: 149 --NPN-------IETCEFFENY-EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHM 198
N N IE C +FE + E + +LP GVYT++DL+ FGK++GWCPYFL+R
Sbjct: 119 ISNNNATATVDDIELCNYFERFIEANPTDTILPNGVYTMRDLKVFGKKKGWCPYFLSRRA 178
Query: 199 VQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
+++ANVVVYSY YLLDPK++ IISK + S+VVFDEAHNIDNVCIEALS+++ R L
Sbjct: 179 IEYANVVVYSYSYLLDPKISSIISKNLPANSIVVFDEAHNIDNVCIEALSINIDRDILGV 238
Query: 259 ATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG--------NLPNAWLSNPALPS 310
A NL+++ + I + ++ RL+ EY RLV+GL G + LSNP LP
Sbjct: 239 AKSNLTKLEENIANMEKVNSQRLQEEYRRLVDGLGAVGVGRSSDVIRSDDELLSNPVLPG 298
Query: 311 DILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTL 370
DI+ EAVPGNIR+A HF+ ++R ++ RL+T+ E P F+ + + ID ++L
Sbjct: 299 DIMTEAVPGNIRKAHHFVKFMKRFATHVNKRLQTQKSVNETPEQFLNHVLENIDIDSRSL 358
Query: 371 RFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPV 430
RFC ERL SLM TLEI + EF I+ I DFATL+GTY GF IIIEP D R P PDPV
Sbjct: 359 RFCSERLLSLMNTLEIKNIYEFNGIKIIMDFATLIGTYQEGFVIIIEPHDPRTPTNPDPV 418
Query: 431 LQLSCHDASLAV-KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
LQ SC DASLA+ KP+F RF++VV+TSGTLSP+D+YP+LL F P++S+S +M+LTR+CIC
Sbjct: 419 LQFSCMDASLAISKPIFGRFKTVVLTSGTLSPLDMYPKLLKFKPIISKSLEMTLTRECIC 478
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
P+VLTRGSDQ+ V+TK+ R+D V RNYG LL+E+ +PDGIVCFF SY YM++I++
Sbjct: 479 PLVLTRGSDQVAVTTKYRFRNDASVQRNYGSLLLELSKYIPDGIVCFFTSYQYMEDIVSF 538
Query: 550 WNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFD 609
WN G+L I HKLVFIET + ET +AL+NYRKACDCGRGA+FFS+ARGKVAEGIDFD
Sbjct: 539 WNSVGLLSSITNHKLVFIETPNTAETAIALENYRKACDCGRGAIFFSIARGKVAEGIDFD 598
Query: 610 RHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 669
HYGR V+M GVPFQ T SKIL ARL YLR F IKE FLTFDALR A+QC+GRVIR+K
Sbjct: 599 GHYGRCVVMIGVPFQNTESKILKARLNYLRQNFAIKEETFLTFDALRHASQCIGRVIRNK 658
Query: 670 ADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY 726
ADYG+M+ ADKRY++ DKR+KLP WI ++D +LNLSTDM + IAR++L++MAQPY
Sbjct: 659 ADYGIMVLADKRYNQPDKRNKLPKWIAKQIKDTYLNLSTDMIIGIARKYLKEMAQPY 715
>gi|409045964|gb|EKM55444.1| hypothetical protein PHACADRAFT_256068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 792
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/745 (52%), Positives = 534/745 (71%), Gaps = 9/745 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPYD IYPEQYSYM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFYIDDLPVIFPYDRIYPEQYSYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ------TRHLGPAAKILAIGLSSRKN 114
P KLIYC+RTV E+EK LAELK L Y+ +GL+SRKN
Sbjct: 61 QFYPARR-KLIYCSRTVPEIEKALAELKRLMEYRLSIAETEEQQAKERGFYGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T S V +NP +++ C++ EN K ++PPG
Sbjct: 120 LCIHPEVSKEKKGRVVDARCRDLTNSAVCQKGRDNPGSVDLCDWHENLGKLEPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +G+ CPYFL R M+ F +VV+YS+ YLLDPKVA +SKEM K+S+VVF
Sbjct: 180 IWTLADVLQYGRDNVVCPYFLVRRMMAFVDVVIYSFHYLLDPKVAEQVSKEMSKDSIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R+++R+ +IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVTRLGDKIEEIKRTDASKLQDEYAKLVEGLQ 299
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
++ ++NP LP D+L EA+PGNIR+AEHF+ L+R V+YL+ R+ +V E P+
Sbjct: 300 EAATDEDSLVANPVLPEDLLTEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPL 359
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
SF+ + I+++ LRFC ERL SL+ TLE+ DEF +Q + FATLV TY +GF
Sbjct: 360 SFLQHLKDITYIERRPLRFCAERLQSLVRTLELNRLDEFSALQKVASFATLVATYEKGFL 419
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
+I+EPF+ +P+P+ +C D S+A+K VF+RF SVVITSGT+SP+D+YP++L F P
Sbjct: 420 LILEPFETDNATVPNPIFHFTCLDPSIAIKTVFERFSSVVITSGTISPLDMYPKMLQFTP 479
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
V+ S+ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVPDGI
Sbjct: 480 VIQESYSMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGI 539
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAV 593
V FF SY YM+ I+A WND GIL E+ ++KL+F+ET D ET++AL+NYR+ACD GRGAV
Sbjct: 540 VAFFPSYLYMESIVAAWNDMGILNEVWKYKLIFVETPDANETSIALENYRRACDNGRGAV 599
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD 653
SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRDT++I+E +FL FD
Sbjct: 600 LLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDTYRIRESEFLGFD 659
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALH 713
A+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMA+
Sbjct: 660 AMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMAIT 719
Query: 714 IAREFLRKMAQ-PYDKAGSIGRKTL 737
+++ F+R ++Q P + I TL
Sbjct: 720 LSKLFMRTISQNPNENQTGISLWTL 744
>gi|167536176|ref|XP_001749760.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771687|gb|EDQ85349.1| predicted protein [Monosiga brevicollis MX1]
Length = 798
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/748 (53%), Positives = 535/748 (71%), Gaps = 21/748 (2%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
+F ++D+ V+FPYD IYPEQY YM E+KRALDAKGH LLEMP+GTGKT++LLSLI SY L
Sbjct: 22 MFMIDDLQVFFPYDLIYPEQYEYMQEIKRALDAKGHALLEMPSGTGKTVSLLSLIVSYQL 81
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
P K IYC+RTV E+EK L ELK + Y ++ +G L +GLSSR+N+C++ V
Sbjct: 82 GYPGRLGKFIYCSRTVPEIEKVLGELKRVIAYMSKEMGRNLDYLGLGLSSRRNMCIHPDV 141
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLR 181
VD+ CR+ TAS+VR A+ ++ C +F +E A LP GVY L+DL+
Sbjct: 142 SQERTGAIVDSRCRQLTASFVREKTADGKSL--CTYFNGFEAHGRDAPLPAGVYNLEDLK 199
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
FG+Q+ +CPYFLAR+ + AN+VVYSY YLLDPK+A ++S+EM ++SVVVFDEAHNIDN
Sbjct: 200 VFGEQRKFCPYFLARYAITHANIVVYSYHYLLDPKIAELVSREMGRDSVVVFDEAHNIDN 259
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN- 300
VCIE++SV+++++ L+ AT NL + +++ K ++ +LR EY LV+GL R N N
Sbjct: 260 VCIESMSVTIQQRHLDRATANLRSLKNKVKEMKESNTEQLRHEYQNLVQGL--RDNRANQ 317
Query: 301 ---AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+ ++NP LP D+L+EAVPGNIR+AEHF+ + R V+YL+ RL + V E P +F+
Sbjct: 318 ATDSVMANPVLPHDVLEEAVPGNIRKAEHFVAFMDRFVEYLKTRLRVKQVLSEPPAAFLE 377
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ I+ K LRFC ERL SL+ TLE+ D++ I I FATLV TY++GFS+IIE
Sbjct: 378 HVFQSVCIEAKPLRFCSERLGSLLQTLELARIDDYGPITLIASFATLVSTYSKGFSLIIE 437
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P+D+R P +PDPVL+ +C DASLAVKPVFDRFQSV+ITSGTLSP+D+YP++LNF PV
Sbjct: 438 PYDDRAPSVPDPVLRFTCMDASLAVKPVFDRFQSVIITSGTLSPLDMYPKILNFRPVTMC 497
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF M+L+R + P+V+TR +DQ P+ST+++ R V R YG LL+++ S VPDG+VCFF
Sbjct: 498 SFDMTLSRTSLLPIVVTRSADQTPLSTRYEDREQSAVKRGYGHLLLDICSAVPDGVVCFF 557
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
VSY Y++ ++TW D GI+ +I KLVF+ETQD ET+ ALD+++KAC GRGAV SV
Sbjct: 558 VSYEYLESAVSTWIDQGIMTQIQAKKLVFVETQDGAETSQALDSFQKACANGRGAVLLSV 617
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDFD H GR V+M G+P+ YT S++L ARLEYL D FQIKE +
Sbjct: 618 ARGKVSEGIDFDHHLGRAVVMMGIPYVYTQSRVLKARLEYLADNFQIKEDGW-------- 669
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
QCVGR IR K DYG+M FAD+R+SR DKRSK+P WI +L D HLNLS++ A+ + R
Sbjct: 670 --QCVGRAIRGKTDYGIMCFADQRFSRTDKRSKIPKWIQKYLTDTHLNLSSEEAMVLIRR 727
Query: 718 FLRKMAQPYDKAGSIGRKTLLSQADLEK 745
F R+MAQPY+ + +LL+ +L+K
Sbjct: 728 FQREMAQPYENTPGL---SLLTLEELQK 752
>gi|390366295|ref|XP_780825.3| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Strongylocentrotus purpuratus]
Length = 734
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/688 (55%), Positives = 505/688 (73%), Gaps = 3/688 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V+FPYD IYPEQ+ YM+ELK+ LDAKGH +LEMP+GTGKT++LL+LI +Y+
Sbjct: 1 MKVNVDGLLVHFPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYI 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L +Y G + + LSSRKNLC++
Sbjct: 61 QANPHELTKLIYCSRTVPEIEKAVEELRRLLDYIEEQTGEKPNFVGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD+ C TAS++R +P + C+F+E ++ A + + PG Y+L DL
Sbjct: 121 VSKERIGKVVDSKCHSLTASYIRERRKHDPAVPICDFYEEFDAAGRDSPIEPGAYSLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ G+Q GWCPYFLAR+ + AN++VYSY YLLDPK+A +SKE+ K+S V+FDEAHNID
Sbjct: 181 KEIGRQNGWCPYFLARYTITHANIIVYSYHYLLDPKIAEQVSKELSKQSAVIFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE++SV++ R+TL+ + +NL + + I R K TDA RLR EY RLV+GL A R
Sbjct: 241 NVCIESMSVNISRKTLDKSNQNLDSLTRHINRIKDTDAQRLREEYQRLVDGLREASRARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ LSNPALP ++L EAVPGNIR AEHF+ LRR V+YL+ RL ++V E P SF+
Sbjct: 301 TDVHLSNPALPDEVLDEAVPGNIRTAEHFIGFLRRFVEYLKTRLRVQHVISETPASFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDT-DEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ + I++K LRFC ERLHSL+ TLE+TD D + + FATLV TYT+GFS+IIE
Sbjct: 361 VFSKVCIERKPLRFCAERLHSLLRTLELTDVQDNMSPLVAVSGFATLVSTYTKGFSLIIE 420
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
PFD++ P I +PVL SC DAS+A+KPVFDRFQSVVITSGTLSP+D+YP++L+F PV
Sbjct: 421 PFDDKTPTISNPVLHFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMYPKILDFRPVSMA 480
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF M+L+R ICP+++ RG+DQ+ +S++F+ R D V RNYG L+VE+ IVPDGIV FF
Sbjct: 481 SFSMTLSRSSICPIIVARGNDQVTISSRFESREDVAVIRNYGNLIVELSGIVPDGIVAFF 540
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY+YM+ ++ATW + GI+ I ++KL+FIETQD ET++AL+NY KAC+ GRGA+ SV
Sbjct: 541 TSYTYMESVVATWYEQGIIDSIQKNKLLFIETQDAAETSIALNNYHKACENGRGAILLSV 600
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDFD HYGR VIM G+P+ YT S+IL ARLEYLRD +QIKE DFLTFDA+R
Sbjct: 601 ARGKVSEGIDFDHHYGRAVIMLGIPYVYTQSRILKARLEYLRDQYQIKENDFLTFDAMRH 660
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRH 685
AAQCVGR +R K DYG+M+FADK H
Sbjct: 661 AAQCVGRALRGKTDYGIMVFADKVLYNH 688
>gi|328855625|gb|EGG04750.1| hypothetical protein MELLADRAFT_108080 [Melampsora larici-populina
98AG31]
Length = 795
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/743 (53%), Positives = 532/743 (71%), Gaps = 20/743 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIF ++D+ + FPYD IYPEQ M +LKR LD GHC+LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MIFNIDDLEIIFPYDKIYPEQ---MSDLKRTLDVGGHCVLEMPSGTGKTISLLSLIVAYQ 57
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL---------GPAAK--ILAIGL 109
+ PE KL+YC+RTV E+EK L ELK L Y+ L GP L IGL
Sbjct: 58 QNHPEKR-KLVYCSRTVPEIEKALIELKRLMAYRASQLRLRAELTNAGPIEDEDFLGIGL 116
Query: 110 SSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAA 168
+SRKNLC++ V + VDA CR T++W NP ++ CEF E + +
Sbjct: 117 TSRKNLCIHPDVSREKKGKVVDARCRDLTSAWACEQGRANPGSVPLCEFHEKLGELEAGD 176
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
++P GV+TL+++ +G QQG CPYF R M+ +A+VV+YS+ YLLDPKVA +SKE+
Sbjct: 177 LIPRGVWTLEEITNYGHQQGICPYFAVRRMLAYADVVIYSFHYLLDPKVATQVSKEISPN 236
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
S+VVFDEAHNIDNVCIE+LS+ + + L+ A R + + +I+ K TDA +L+ EY RL
Sbjct: 237 SIVVFDEAHNIDNVCIESLSIDLNKSILDNAGRAIENLEVKIQEIKRTDASKLQNEYQRL 296
Query: 289 VEGLA----LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLET 344
V GL + ++ P LP D+L+EA+PGNIRRAEHF L R V+YL+ R+
Sbjct: 297 VRGLQGSELEQAEDEAGVIATPVLPDDLLQEAIPGNIRRAEHFTAFLTRFVEYLKTRMRV 356
Query: 345 ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATL 404
+V E P+SF+ + ID+K LRFC ERL SL+ TLE+T D++ +Q + FATL
Sbjct: 357 LHVVAETPLSFLQHLKDLTFIDRKPLRFCSERLTSLIRTLELTQLDQYNGLQQVASFATL 416
Query: 405 VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
V TY +GF +I+EPF+ +P+PV L+C DASLA+KPVFDRF SVVITSGT+SP+D+
Sbjct: 417 VATYEKGFLLILEPFETENATVPNPVFHLTCLDASLAIKPVFDRFSSVVITSGTISPLDM 476
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVE 524
YP++L F V S+ M+LTR+C P+V+TRG+DQ+ +S++F++R+DP V RN+G +L++
Sbjct: 477 YPKMLGFESAVQESYSMTLTRNCFLPLVITRGADQVAISSRFEVRNDPSVVRNFGTVLID 536
Query: 525 MVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK 584
IVPDGIV FF SY YM+ I+A W+D GILKE+ ++KL+F+ET D VET++AL+NYR+
Sbjct: 537 YCKIVPDGIVAFFPSYLYMESIVAAWHDMGILKEVWKYKLIFVETPDAVETSIALENYRR 596
Query: 585 ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQI 644
ACD G+GAV SVARGKV+EGIDFD +YGR VIMFG+P+QYT S+IL ARLE+LRD ++I
Sbjct: 597 ACDNGKGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNYRI 656
Query: 645 KEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
+E D+LTFDA+R AAQCVGRV+R K DYG+MIFADKR+++ DKR+KLP WI +++ D
Sbjct: 657 RENDYLTFDAMRHAAQCVGRVLRGKTDYGLMIFADKRFAKADKRAKLPKWINAYITDTAT 716
Query: 705 NLSTDMALHIAREFLRKMAQPYD 727
NLSTDMA+ I++ FLR MAQP++
Sbjct: 717 NLSTDMAMVISKRFLRSMAQPFE 739
>gi|392567211|gb|EIW60386.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 804
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/754 (52%), Positives = 539/754 (71%), Gaps = 13/754 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPYD IYPEQY+YM +LKR LDA GHCLLEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG------PAAKILAIGLSSRKN 114
P KLIYC+RTV E+EK LAELK L +Y+ H A IGL+SRKN
Sbjct: 61 QFYPTKR-KLIYCSRTVPEIEKALAELKRLMDYRKEHAETEEQREKEASFYGIGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T + ENP +++ C++ E K ++PPG
Sbjct: 120 LCIHPEVSKEKKGKVVDARCRDLTNAAACQKGRENPGSVDLCDWHEELGKLEPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ G+ CPYFL R M+ F +V++YS+ YLLDPKVA +SKE+ K+++VVF
Sbjct: 180 IWTLADVLQHGRDNRVCPYFLVRRMMPFVDVIIYSFHYLLDPKVAEQVSKEITKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R++ R+ +I+ K TDA +L+ EY RLVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVVRLGDKIDEIKKTDASKLQDEYMRLVEGLQ 299
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
+ +A++SNP LP D+LKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E P+
Sbjct: 300 EANDAEDAFVSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPL 359
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG-F 412
SF+ + I+++ LRFC ERL SL+ TLE+ DEF +Q + FATLV TY +G
Sbjct: 360 SFLQHLKDITYIERRPLRFCAERLQSLVRTLEVNRVDEFSSLQKVASFATLVATYEKGTL 419
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH 472
+ P++ +P+P+ L+C D ++A+KPVF+RF +VVITSGTLSP+D+YP++L F
Sbjct: 420 YPLAFPYETEAATVPNPIFHLTCLDPAIAIKPVFERFSTVVITSGTLSPLDMYPKMLQFT 479
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
PVV ++ MSLTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVPDG
Sbjct: 480 PVVQETYAMSLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDG 539
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA 592
IV FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+ACD GRGA
Sbjct: 540 IVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGA 599
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF 652
V SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL F
Sbjct: 600 VLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGF 659
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
DA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMAL
Sbjct: 660 DAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETAANLSTDMAL 719
Query: 713 HIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
++++F+R ++Q P + I TL AD+EK
Sbjct: 720 TLSKQFMRVISQNPNENQTGISLWTL---ADVEK 750
>gi|357624408|gb|EHJ75192.1| hypothetical protein KGM_19783 [Danaus plexippus]
Length = 736
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/718 (52%), Positives = 516/718 (71%), Gaps = 2/718 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
MLELKRALDAKGH LLEMP+GTGKTI+LLSLI +Y++ P + KLIYC+RTV E+EK L
Sbjct: 1 MLELKRALDAKGHGLLEMPSGTGKTISLLSLIVAYMIQNPHHVRKLIYCSRTVPEIEKVL 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
ELK L Y + G + + LSSRKNLC++ V VD C TAS++R
Sbjct: 61 EELKNLIKYYEKSQGEKPSLTGVVLSSRKNLCIHPEVSREREGKLVDGKCHSLTASYIRD 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++P++ C+F+E + + ++LP GVYT+ DL+ +G + WCPYFL+R + A +
Sbjct: 121 RHEQDPSVPICQFYEGFNREGRESMLPYGVYTMDDLKQYGADRNWCPYFLSRFAIIHAEI 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKE+ KE+VVVFDEAHNIDNVCI++LSV + R+T++ +T+ L
Sbjct: 181 VVYSYHYLLDPKIAEVVSKELNKEAVVVFDEAHNIDNVCIDSLSVKITRRTIDKSTQALQ 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGLALRGNL--PNAWLSNPALPSDILKEAVPGNIR 322
+ + + + K D RL EY ++VEGL L + L NP LP ++L E VPGNIR
Sbjct: 241 TLEKAVSQLKQEDEARLALEYEQMVEGLREAAQLRDSDVILGNPVLPDELLNEVVPGNIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A HFL L+R ++YL+ RL ++V +E P F+ +++ I++K LRF RL +LM
Sbjct: 301 NAVHFLGFLKRFIEYLKTRLRIQHVVQESPAGFLKDVSSRVCIERKPLRFVSSRLQTLMK 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TL+I D F + + ATLV TYT+GF IIIEPFD++ P + +P+L SC D+S+A+
Sbjct: 361 TLQIPDPSNFGSLTLVAHLATLVSTYTKGFVIIIEPFDDKTPTVSNPILHFSCMDSSIAM 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
+PVF RFQ+V+ITSGTLSP+D+YP++L+F+PVV SF M+L R CI PM++++GSDQ+ +
Sbjct: 421 RPVFGRFQTVIITSGTLSPLDMYPKILDFNPVVMSSFTMTLARPCILPMIVSKGSDQVAI 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+K++ R D V RNYG+LLVE+ + VPDG+VCFF SY Y++ ++ W D G++ + +H
Sbjct: 481 SSKYETREDVAVIRNYGQLLVEISACVPDGVVCFFTSYLYLESVVGAWYDQGVVANLQKH 540
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET+ AL NY KAC+ GRGAV SVARGKV+EG+DFD H GR V+MFG+P
Sbjct: 541 KLLFIETQDSAETSFALINYIKACESGRGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIP 600
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ +T S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+
Sbjct: 601 YVFTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRF 660
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQ 740
SR DKRSKLP WI HLRD+ NLST+ A+ I++ +LR+M+QP+ + +G L Q
Sbjct: 661 SRSDKRSKLPRWIQEHLRDSLCNLSTEEAVQISKRWLRQMSQPFSREDQLGVSLLTLQ 718
>gi|340376021|ref|XP_003386532.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Amphimedon queenslandica]
Length = 754
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/735 (51%), Positives = 520/735 (70%), Gaps = 5/735 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPY+ +YPEQY+YML+LKR LDAKGHC+LEMP GTGKT++LL+LI +Y
Sbjct: 1 MKINIDGLLVIFPYEYVYPEQYTYMLDLKRTLDAKGHCVLEMPCGTGKTVSLLALIIAYH 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
++ P + KLIYC+RTV E+ K ++ELK L + G +L + LSSRKNLC++
Sbjct: 61 MAHPHHIQKLIYCSRTVQEINKAMSELKRLLDAYKSEFGSTPNVLGVALSSRKNLCIHPM 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+ + VD C K TAS+VR + + C+FFE ++ L PGVY + DL
Sbjct: 121 IAGNKEGKLVDTECYKLTASFVREKHKADKSTPVCQFFEEFDVKGRVDPLKPGVYDMDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
++ G+ +GWCPY+LAR+ + A V++YSY YLLDPK+A I+SK + ++SVVVFDEAHNID
Sbjct: 181 KSLGQTKGWCPYYLARYTLGHATVIMYSYHYLLDPKIAEIVSKGLPQQSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE++S+++ R+TLE T N IN + + RLR EY RLVEGL A
Sbjct: 241 NVCIESMSITIGRKTLEKCTAN---INNLQAKLRELGEERLRQEYQRLVEGLRRAREERE 297
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP D+L+EA+PGN+RR EHFL ++R +YL+ RL +V E P F+ +
Sbjct: 298 NDIQLANPVLPDDVLQEALPGNMRRGEHFLLFMKRFAEYLKSRLLARHVVSETPKYFLQN 357
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I + ID+K LRFC ERLH ++ TL++ + ++ I + +FATLV TYT GFS+IIEP
Sbjct: 358 IYSTVCIDRKPLRFCSERLHFMLQTLQLLELSDYSAITKVANFATLVSTYTEGFSLIIEP 417
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD R P I +P+L SC DA +A+KPVFD + SV++TS T+SP+D+YPRLL F P + S
Sbjct: 418 FDNRAPTIFNPILHFSCMDAGIAIKPVFDHYTSVILTSATISPLDMYPRLLRFQPALLSS 477
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ +SL R CICP+++ RG+DQ+ ++TKF+ R D + RNYG ++VE+ S++PDGIV FF
Sbjct: 478 YGISLARPCICPIIVARGNDQVSITTKFEERGDTAIIRNYGNVVVELSSVIPDGIVAFFP 537
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM++ + W D G++ +I ++KLVF+ET D E +AL+NYRKAC+ GRGA+ SV
Sbjct: 538 SYEYMEQTVHEWVDQGLMSKIQRNKLVFVETVDNAEMNMALNNYRKACENGRGALLLSVV 597
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD HYGR VIM G+P+ YT S+IL ARLE+LRD FQI+E DFLTFDA+R +
Sbjct: 598 RGKVSEGVDFDHHYGRAVIMIGIPYVYTQSRILKARLEFLRDNFQIRENDFLTFDAMRNS 657
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GR +R K DYG+M+FADKRY R DK+ KLP WI HL DA +LS + ++HI + F
Sbjct: 658 AQCIGRALRGKTDYGIMVFADKRYGRSDKKGKLPKWIQEHLSDAVCSLSIEESVHICKRF 717
Query: 719 LRKMAQPYDKAGSIG 733
LR+MAQP+ K IG
Sbjct: 718 LRQMAQPFKKEEQIG 732
>gi|405958071|gb|EKC24234.1| TFIIH basal transcription factor complex helicase subunit
[Crassostrea gigas]
Length = 1184
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/793 (51%), Positives = 541/793 (68%), Gaps = 50/793 (6%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQY YMLELK++LDAKGHC LEMP+GTGKTI+LLSLI +Y+ +
Sbjct: 383 LNIDGLLVYFPYDYIYPEQYMYMLELKKSLDAKGHCALEMPSGTGKTISLLSLIVAYMKA 442
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA-KILAIGLSSRKNLCVNSRV 121
P KLIYC+RTV E+EK +AELK L +Y + LG KIL + LSSRKNLC+N V
Sbjct: 443 NPLEVTKLIYCSRTVPELEKVVAELKNLMDYYEQQLGKGKPKILGLALSSRKNLCINPEV 502
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP---GVYTLQ 178
+ +VDA C K TAS+VRA + + C F+E+Y+ LP G+ T
Sbjct: 503 SQERDGKNVDALCHKLTASFVRANHKRDATVPVCSFYESYDAHGKEMPLPEGVYGLITHA 562
Query: 179 DLRAFGKQQGWCPYF---LARHMVQFANVV------------------------------ 205
++ + P +++ + + A VV
Sbjct: 563 NIVVYSYYYLLDPKIAEVVSKELSKNAVVVFDEAHNIDNVCIESMSIKITRRTLDKCQQN 622
Query: 206 -------VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
+ SY YLLDPK+A ++SKE+ K +VVVFDEAHNIDNVCIE++S+ + R+TL+
Sbjct: 623 IDGLSKQIQSYYYLLDPKIAEVVSKELSKNAVVVFDEAHNIDNVCIESMSIKITRRTLDK 682
Query: 259 ATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEA 316
+N+ ++++I+R K DA RL+ EY +LV+GL A + L+NP LP D+LKEA
Sbjct: 683 CQQNIDGLSKQIQRLKDCDAERLKTEYQKLVQGLRDANIARETDVILANPVLPDDVLKEA 742
Query: 317 VPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYER 376
VPGNIR AEHFL ++R ++Y++ RL ++V E P SF+ I++K LRFC ER
Sbjct: 743 VPGNIRTAEHFLGFMKRFLEYMKIRLRVQHVVSESPPSFLKDCYQKVCIERKPLRFCAER 802
Query: 377 LHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCH 436
L+S+M TLE+ + +F + +C FATLV TY +GF +IIEPFD+R P I +P+L SC
Sbjct: 803 LNSMMRTLELVEIHDFSALSLLCHFATLVSTYAKGFVLIIEPFDDRTPTISNPILHFSCM 862
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
DAS+A+KPVFDRFQ+VVITSGTLSP+++YPR+L+F PV +F M+L R CICPMV+++G
Sbjct: 863 DASIAIKPVFDRFQTVVITSGTLSPLEMYPRILDFRPVTMATFTMTLARTCICPMVVSKG 922
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
+DQ+ +++K++ R D V RNYG LLVE SIVPDGIVCFF SY YM+ +A W + GIL
Sbjct: 923 NDQVAMTSKYETREDVAVIRNYGNLLVEFCSIVPDGIVCFFTSYIYMESTVAAWYEQGIL 982
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
++ +HKL+FIETQD ET+LAL NY+KAC+ GRGAV SVARGKV+EGIDFD H+GR V
Sbjct: 983 DQVQKHKLLFIETQDAAETSLALLNYQKACENGRGAVLLSVARGKVSEGIDFDHHFGRAV 1042
Query: 617 IMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMI 676
IMFG+P+ YT SKIL ARLEYLRD +QI+E DFLTFDA+R AAQCVGR +R K DYG+M+
Sbjct: 1043 IMFGIPYVYTQSKILKARLEYLRDQYQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMV 1102
Query: 677 FADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
FADKR++R DKRSK+P WI +L+D NLS D A+ +++ FLR+MAQP+ + +G
Sbjct: 1103 FADKRFARADKRSKIPRWIQEYLKDGLCNLSVDEAVQVSKRFLRQMAQPFSREDQLGLSL 1162
Query: 737 L----LSQADLEK 745
L L Q D +K
Sbjct: 1163 LTVEQLDQEDTKK 1175
>gi|392595870|gb|EIW85193.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 787
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/754 (52%), Positives = 542/754 (71%), Gaps = 13/754 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR------HLGPAAKILAIGLSSRKN 114
P N KLIYC+RTV E+EK LAELK L Y+ + +GL+SRKN
Sbjct: 61 QFYP-NKRKLIYCSRTVPEIEKALAELKRLMEYRIKCAETTEQKEKEENFRGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T S V A E+P ++E CE+ EN K +++ PG
Sbjct: 120 LCIHPEVAKEKKGKVVDARCRDLTNSAVCAKGREDPGSVELCEWHENLGKLEPGSLISPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
V+TL D+ G+ G CPYF R M+ F +VV+YS+ YLLDPKVA +SKEM K+++VVF
Sbjct: 180 VHTLADVLEHGRANGTCPYFTVRRMMPFVDVVIYSFHYLLDPKVAEQVSKEMSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R++ ++ +IE K TDA +L+ EY RLVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVVKLGDKIEEIKRTDAAKLQDEYARLVEGLQ 299
Query: 294 -LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGP 352
++++SNP LP D+L EA+PGNIR+AEHF+ L+R V+YL+ R+ +V E P
Sbjct: 300 EPAAPEEDSFMSNPVLPEDLLSEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETP 359
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGF 412
+SF+ + I+++ LRFC ERL S++ TLE++ DE+ +Q + FATLV TY +GF
Sbjct: 360 LSFLQHLKDITYIERRPLRFCAERLQSMIRTLELSRLDEYSSLQKVASFATLVATYEKGF 419
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH 472
+I+EPF+ +P+P+ +C D SLA+KPVF+RF SVVITSGT+SP+D+YP++L F
Sbjct: 420 LLILEPFETDSATVPNPMFHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKMLQFT 479
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
PVV S+ M+L R+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVPDG
Sbjct: 480 PVVQESYSMTLARNTFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDG 539
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA 592
IV FF SY YM+ I+A WND GIL E+ ++KL+F+ET D ET++AL+NYR+ACD GRGA
Sbjct: 540 IVAFFPSYLYMESIVAAWNDMGILTEVWKNKLIFVETPDANETSIALENYRRACDNGRGA 599
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF 652
V SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL F
Sbjct: 600 VLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGF 659
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
DA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMA+
Sbjct: 660 DAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITEVASNLSTDMAI 719
Query: 713 HIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
+++ F+R ++Q P++ + +L + D+EK
Sbjct: 720 TLSKLFMRTISQNPHENQAGV---SLWTVEDIEK 750
>gi|321249881|ref|XP_003191608.1| general RNA polymerase II transcription factor [Cryptococcus gattii
WM276]
gi|317458075|gb|ADV19821.1| general RNA polymerase II transcription factor, putative
[Cryptococcus gattii WM276]
Length = 799
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/731 (52%), Positives = 531/731 (72%), Gaps = 6/731 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L D+ V FPYD +YPEQYSYM +LK LDA GHC+LEMP+GTGKT++LLSLI +Y+
Sbjct: 1 MKFMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P N KLIYC+RTV E+EK LAELK L Y+ +GL+SR+NLC++
Sbjct: 61 QFYP-NKRKLIYCSRTVPEIEKALAELKRLMAYRADMGANDGNFRGLGLTSRRNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPGVYTLQD 179
V + VD+ CR T+++ +P ++ C F E ++PPGVYTL D
Sbjct: 120 VSKEKKGKVVDSRCRDLTSAYACEKGRADPGSVPLCSFHEELNNYEPGNLIPPGVYTLDD 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
++ +G+++G CPYF R M+ F +VV+YS+ YLLDPKVA +S EM KES+VVFDEAHNI
Sbjct: 180 VKKYGQEKGVCPYFTIRRMLPFLDVVIYSFHYLLDPKVAEQVSAEMSKESIVVFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP 299
DNVCIE+LS+ + R L+ A R+++++N +I K TDA +L EY +LVEGL N+
Sbjct: 240 DNVCIESLSIDLTRPMLDSAARSVNKLNDKIAEIKETDAKKLEDEYAKLVEGLQ-EANVS 298
Query: 300 ---NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
L +P L D++ EAVPGNIR+AEHF+ L+R ++YL+ R+ +V E P SF+
Sbjct: 299 AEDEDMLVSPVLSKDMVDEAVPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFL 358
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
A + I+Q+ L+F ERL SL+ TLE+T+ +E +Q + F TLV TY +GF +I+
Sbjct: 359 AHLKEITYIEQRPLKFASERLTSLVRTLELTNLEEHSALQKVAGFGTLVATYEKGFLLIL 418
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP++ +P+P+ +C D SLA+ PVFDRF SVVITSGT+SP+D+YP++L F PV+
Sbjct: 419 EPYETEHATVPNPIFHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVME 478
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
+S+ M+LTR+ PMV+TRGSDQ+P+S++F++R+DP V RN+G +L+EM VPDG+V F
Sbjct: 479 QSYPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIEMARTVPDGVVAF 538
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ I++ W D GIL E+ +HKL+F+ET D +ET++AL NYR+AC+ GRGAV S
Sbjct: 539 FPSYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETSIALRNYREACNNGRGAVLLS 598
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD +YGR VIMFG+P+QYT S+IL ARLE+LRD +I+E D+LTFDA+R
Sbjct: 599 VARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMR 658
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQCVGRV+R K D+G+MIFADKR++R DKR+KLP WI S++ +AH NLSTD+A+ +A+
Sbjct: 659 HAAQCVGRVLRGKTDWGLMIFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAK 718
Query: 717 EFLRKMAQPYD 727
+F+R+++QP+D
Sbjct: 719 KFIRQISQPFD 729
>gi|213402977|ref|XP_002172261.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
gi|212000308|gb|EEB05968.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
Length = 773
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/728 (53%), Positives = 523/728 (71%), Gaps = 3/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM +LK++LD G LLEMP+GTGKTI+LLSLI SY
Sbjct: 1 MKFYIDDLPVIFPYPRIYPEQYQYMCDLKKSLDVGGVALLEMPSGTGKTISLLSLIISYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E++K LAELK L Y+ + LG L +GL+SRKNLC++
Sbjct: 61 QFYPEQR-KLIYCSRTMSEIDKALAELKRLMAYREKELGRREPFLGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +N + VDA CR TA +V+ ++E C+F EN E A++P GV+TL DL
Sbjct: 120 VRREKNGNVVDARCRALTAGFVKEKKLAGMDVELCDFHENLEDLEPHALVPEGVWTLDDL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 TEYGQKTTRCPYFSARRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A+R ++ + +++ K DAG+L+ EY +LV+GL A +
Sbjct: 240 NVCIESLSIDLTESSLRKASRGITALERKVAEVKQVDAGKLQDEYRKLVQGLREADEASQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF+
Sbjct: 300 EQQFMSNPVLPEDVLKEAVPGNIRRAEHFIAFLKRFIEYLKTRMKVLYVIAETPASFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ D+F +Q I FATLV TY RGF +I+EP
Sbjct: 360 MKDLTFIERKPLRFCAERLTSLVRTLELPIVDDFHSLQQIATFATLVATYERGFVLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+PVL +C DAS+A+KPVFD+F+SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 YETENATVPNPVLHFACLDASIAIKPVFDKFRSVIITSGTLSPLNMYPKMLQFETVMMES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ MSL R+ PMV+TRGSDQ+ +S+KF+ R+DP + RNYG +L+E PDG+V FF
Sbjct: 480 YGMSLARNSFLPMVITRGSDQVAISSKFEARNDPSIVRNYGNILIEFSKTTPDGLVAFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY Y++ I+++W GIL E+ ++KL+ +ET D ETTLAL+ YR AC GRGAV SVA
Sbjct: 540 SYLYLESIVSSWQSMGILDEVWKYKLILVETPDAQETTLALETYRAACCNGRGAVLLSVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DFD YGR VIMFG+P+QYT S+IL ARLE+LRDT+QI+E DFLTFDA+R A
Sbjct: 600 RGKVSEGVDFDHQYGRTVIMFGIPYQYTESRILKARLEFLRDTYQIRENDFLTFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K D G+M+ ADKRY R DKRSKLP WI + + NLSTDMA+ +A++F
Sbjct: 660 AQCLGRVLRGKDDSGIMVLADKRYGRSDKRSKLPKWIQQYTSEGAANLSTDMAVALAKKF 719
Query: 719 LRKMAQPY 726
LR MAQP+
Sbjct: 720 LRTMAQPF 727
>gi|426200162|gb|EKV50086.1| hypothetical protein AGABI2DRAFT_183219 [Agaricus bisporus var.
bisporus H97]
Length = 792
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/755 (52%), Positives = 540/755 (71%), Gaps = 15/755 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA------KILAIGLSSRKN 114
P KLIYC+RTV E+EK L ELK L Y+ + +GL+SRKN
Sbjct: 61 QFYPTKR-KLIYCSRTVPEIEKALTELKRLMKYREEAAESEEEKIKERNYMGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC+N V + VDA CR T S V +P ++E C++ EN K ++P G
Sbjct: 120 LCINPEVSREKKGKVVDARCRDLTNSAVCEKGRADPGSVELCDWHENLGKMEPGHLMPAG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +GK+Q CPYF R M+ F + V+YS+ YLLDPKVA +SKEM K+S+VVF
Sbjct: 180 IWTLADVLDYGKEQRICPYFAVRRMMPFVDAVIYSFHYLLDPKVAEQVSKEMSKDSIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R+++++ ++IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAVRSVTKLGEKIEEVKTTDAAKLQDEYAKLVEGLQ 299
Query: 294 L--RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
+ NA L+NP LP DILKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 EPDDSDTDNA-LANPVLPEDILKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAET 358
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
P+SF+ + I+++ LRFC ERL SL+ TLE++ DE +Q + FATLV TY +G
Sbjct: 359 PLSFLQHLKDITYIERRPLRFCAERLQSLIRTLELSRLDEHSSLQKVATFATLVATYEKG 418
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
F +I+EPF+ +P+P+ +C D SLA+KPVF+RF SVVITSGT+SP+D+YP++L F
Sbjct: 419 FLLILEPFETDNATVPNPIFHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKMLQF 478
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
PVV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +LVE IVPD
Sbjct: 479 TPVVQETYSMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPD 538
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIV FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+ACD GRG
Sbjct: 539 GIVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRG 598
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AV SVARGKV+EGIDFD +YGR V+MFGVP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 599 AVLLSVARGKVSEGIDFDHNYGRAVLMFGVPYQYTESRILKARLEYLRDAYRIRESEFLG 658
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMA
Sbjct: 659 FDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMA 718
Query: 712 LHIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
+ +++ F+R ++Q P + + +L + D+EK
Sbjct: 719 ITLSKLFMRTISQNPNENQTGV---SLWALEDIEK 750
>gi|409082328|gb|EKM82686.1| hypothetical protein AGABI1DRAFT_118129 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 792
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/755 (52%), Positives = 540/755 (71%), Gaps = 15/755 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA------KILAIGLSSRKN 114
P KLIYC+RTV E+EK L ELK L Y+ + +GL+SRKN
Sbjct: 61 QFYPTKR-KLIYCSRTVPEIEKALTELKRLMKYREEAAESEEEKIRERNYMGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC+N V + VDA CR T S V +P ++E C++ EN K ++P G
Sbjct: 120 LCINPEVSREKKGKVVDARCRDLTNSAVCEKGRADPGSVELCDWHENLGKMEPGHLMPAG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +GK+Q CPYF R M+ F + V+YS+ YLLDPKVA +SKEM K+S+VVF
Sbjct: 180 IWTLADVLDYGKEQRICPYFAVRRMMPFVDAVIYSFHYLLDPKVAEQVSKEMSKDSIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R+++++ ++IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAVRSVTKLGEKIEEVKTTDAAKLQDEYAKLVEGLQ 299
Query: 294 L--RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
+ NA L+NP LP DILKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 EPDDSDTDNA-LANPVLPEDILKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAET 358
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
P+SF+ + I+++ LRFC ERL SL+ TLE++ DE +Q + FATLV TY +G
Sbjct: 359 PLSFLQHLKDITYIERRPLRFCAERLQSLIRTLELSRLDEHSSLQKVATFATLVATYEKG 418
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
F +I+EPF+ +P+P+ +C D SLA+KPVF+RF SVVITSGT+SP+D+YP++L F
Sbjct: 419 FLLILEPFETDNATVPNPIFHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKMLQF 478
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
PVV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +LVE IVPD
Sbjct: 479 TPVVQETYSMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPD 538
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIV FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+ACD GRG
Sbjct: 539 GIVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRG 598
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AV SVARGKV+EGIDFD +YGR V+MFGVP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 599 AVLLSVARGKVSEGIDFDHNYGRAVLMFGVPYQYTESRILKARLEYLRDAYRIRESEFLG 658
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMA
Sbjct: 659 FDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMA 718
Query: 712 LHIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
+ +++ F+R ++Q P + I +L + D+EK
Sbjct: 719 ITLSKLFMRTISQNPNENQTGI---SLWALEDIEK 750
>gi|402224656|gb|EJU04718.1| DNA repair helicase [Dacryopinax sp. DJM-731 SS1]
Length = 798
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/769 (50%), Positives = 548/769 (71%), Gaps = 16/769 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++ + + FPYD IYPEQYSYM +LK+ LDA+GH +LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFNIDGLPIIFPYDRIYPEQYSYMCDLKKTLDAQGHGVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL-GPAAKI-----LAIGLSSRKN 114
P +P KLIYC+RTV E+EK L+EL+ L Y+ P ++ + +GL+SRKN
Sbjct: 61 QHSP-HPRKLIYCSRTVPEIEKALSELQRLMKYRVSQAETPEERMKEESFIGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T S NP ++ C++ E + ++PPG
Sbjct: 120 LCLHPDVSKEKKGKVVDARCRDLTNSAACEKGRANPGSVPLCDWHERLGEKEPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
+YTL ++ +G+ +G CPYF R M+ F +V++YS+ YLLDPKVA +SKE K+++VVF
Sbjct: 180 IYTLAEVLQYGRDEGVCPYFTIRRMMPFVDVIIYSFHYLLDPKVAEQVSKEFSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ ATR++ R+ ++IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSATRSVVRLTEKIEEIKETDASKLQDEYAKLVEGLQ 299
Query: 294 LRGNL---PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKE 350
N +A+++N LP D+LKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 EANNETSDEDAFVANAVLPDDLLKEAIPGNIRKAEHFIAFLKRFVEYLKTRMRVLHVVAE 359
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTR 410
P+SF+ + I+++ LRFC ERL SL+ TLE+ DE+ +Q + FATLV TY +
Sbjct: 360 TPLSFLQHLKDITYIERRPLRFCAERLQSLVRTLELNQLDEYFALQKVASFATLVATYEK 419
Query: 411 GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN 470
GF +I+EPF+ +P+P+ +C D SLA+KP+F+RF SVVITSGT+SP+D+YP++L
Sbjct: 420 GFLLILEPFETETATVPNPIFHFTCLDPSLAIKPIFERFSSVVITSGTISPLDMYPKMLQ 479
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
F PV+ S+ M+LTR+C P+V+TRGSDQ+ VS++F++R+DP V RN+G +L+E IVP
Sbjct: 480 FTPVIQESYPMTLTRNCFLPLVITRGSDQVAVSSRFEVRNDPAVVRNFGSILIEYSKIVP 539
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
DGIV FF SY YM+ I+A WND GIL E+ ++KL+F+ET D ET++AL+NYR+AC+ GR
Sbjct: 540 DGIVAFFPSYLYMESIVAAWNDMGILNEVWKNKLIFVETPDANETSIALENYRRACNNGR 599
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL 650
GAV SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 600 GAVMLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTQSRILRARLEYLRDAYRIRESEFL 659
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDM 710
FDA+R AAQCVGRV+R K D+G+M+FADKRY+R DKR+KLP W+ ++ + NLSTDM
Sbjct: 660 AFDAMRNAAQCVGRVLRGKTDWGLMVFADKRYARADKRAKLPRWMNQYISETASNLSTDM 719
Query: 711 ALHIAREFLRKMAQ-PYDKAGSIGRKTL----LSQADLEKMTNDGSINE 754
A+ +++ F+R+++Q P + I TL QA +MT ++E
Sbjct: 720 AIVLSKLFMRQISQNPNENQTGISLWTLEHIEQRQAAEREMTAQMQVDE 768
>gi|444730736|gb|ELW71110.1| TFIIH basal transcription factor complex helicase XPD subunit
[Tupaia chinensis]
Length = 732
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/730 (53%), Positives = 515/730 (70%), Gaps = 30/730 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQDGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VR ++ ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRVQYQQDSSLPHCRFYEEFDAHGRQVPLPMGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP + RL ++V +E P +F++S
Sbjct: 301 TDAHLANPVLPDE----------------------------WRLRVQHVVQESPPAFLSS 332
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 333 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 392
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +P+L SC DASLA+KPVF RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 393 FDDRTPTIANPILHFSCMDASLAIKPVFSRFQSVIITSGTLSPLDIYPKILDFHPVTMAT 452
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 453 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT 512
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 513 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 572
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 573 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 632
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 633 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 692
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 693 LRQMAQPFHR 702
>gi|393220578|gb|EJD06064.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 800
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/756 (51%), Positives = 544/756 (71%), Gaps = 18/756 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPYD IYPEQY YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFLIDDLPIIFPYDRIYPEQYQYMCDLKRTLDASGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK------ILAIGLSSRKN 114
P KLIYC+RTV E+EK LAELK L Y+ +H + +GL+SRKN
Sbjct: 61 QFYPTKR-KLIYCSRTVPEIEKALAELKRLMEYRIQHAETEEERQKERAFTGVGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V VDA CR T+++ A NP ++ TC F + E ++PPG
Sbjct: 120 LCLHPEVSKERKGVVVDARCRDLTSAFTMERARNNPGSVPTCSFHDELEAFEPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +G+ +G CPYF R M+ F +V++YS+ YLLDPKVA +SK++ K+++VVF
Sbjct: 180 IHTLADVLQYGRDKGVCPYFTVRRMMAFVDVIIYSFHYLLDPKVAEQVSKDISKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL- 292
DEAHNIDNVC+E+LS+ + R L+ A R+++R+ +IE K TDA RL+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCLESLSIDLTRPMLDSAARSVTRLGDKIEEIKITDASRLQDEYAKLVEGLQ 299
Query: 293 -ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
A +A ++NP LP D+LKEAVPGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 EADEARQEDAIMANPVLPDDLLKEAVPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAET 359
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
P+SF+ + I+++ LRFC ERL SL+ TLE+T+ DE+ +Q + +FATLV TY +G
Sbjct: 360 PLSFLQHLKDITFIERRPLRFCAERLQSLVRTLELTNLDEYASLQKVANFATLVATYEKG 419
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
F +I+EPF+ +P+P+ +C D SLA+ PVF+RF SVVITSGT+SP+D+YP++L F
Sbjct: 420 FLLILEPFETDNATVPNPIFHFTCLDPSLAIAPVFERFSSVVITSGTISPLDMYPKMLQF 479
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
PVV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +LVE IVPD
Sbjct: 480 TPVVQETYAMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGAILVEYSKIVPD 539
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GI FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+AC+ GRG
Sbjct: 540 GIAAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACNNGRG 599
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AV SVARGKV+EGIDFD +YGR VI+ VP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 600 AVLLSVARGKVSEGIDFDHNYGRAVII--VPYQYTESRILKARLEYLRDAYRIRESEFLG 657
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDMA
Sbjct: 658 FDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETAANLSTDMA 717
Query: 712 LHIAREFLRKMAQPY--DKAGSIGRKTLLSQADLEK 745
L +++ F+R+++Q + D+ G +L + AD+EK
Sbjct: 718 LVLSKLFMRQISQTHAEDQTGI----SLWTLADIEK 749
>gi|390597969|gb|EIN07368.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 796
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/756 (52%), Positives = 542/756 (71%), Gaps = 15/756 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFHIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR------HLGPAAKILAIGLSSRKN 114
P KLIYC+RTV E+EK L+ELK L Y+ +GL+SRKN
Sbjct: 61 QFYPTK-RKLIYCSRTVPEIEKALSELKRLMEYRIECAETEEEKEKERNFSGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALA-AENPNIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T S V AE ++E C F E + ++PPG
Sbjct: 120 LCIHPEVSKEKKGKVVDARCRDLTNSAVCERGRAEPGSVELCTFHEKLSEREPGNLIPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ +G+ QG CPYF R M+ F +V++YS+ YLLDPKVA +SKE+ K+++VVF
Sbjct: 180 IWTLADVLQYGRDQGTCPYFTVRRMMPFVDVIIYSFHYLLDPKVAEQVSKELSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A+R++ R+ ++IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSASRSVIRLGEKIEEIKKTDASKLQDEYAKLVEGLQ 299
Query: 294 LRGNL---PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKE 350
+ +A++++P LP D+LKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 ETTDEQSDEDAFVTSPVLPDDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAE 359
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTR 410
P+SF+ + I+++ LRFC ERL SL+ TLE+T DE+ +Q + FATLV TY +
Sbjct: 360 TPLSFLQHLKDITYIERRPLRFCAERLQSLVRTLELTRIDEYSSLQKVASFATLVSTYEK 419
Query: 411 GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN 470
GF +I+EPF+ +P+P+ L+C D ++A+KPVF+RF SV+ITSGT+SP+D+YP++L
Sbjct: 420 GFLLILEPFETDNATVPNPMFHLTCLDPAIAIKPVFERFSSVIITSGTISPLDMYPKMLQ 479
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
F PVV ++ M+LTR+ P+V+TRGSDQ+ VS++F++R+DP V RN+G +LVE IVP
Sbjct: 480 FTPVVQETYPMTLTRNAFLPLVITRGSDQVAVSSRFEVRNDPAVVRNFGSILVEYSKIVP 539
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
DGIV FF SY YM+ I+A WND GIL E+ ++KL+F+ET D ET++AL+NYR+ACD GR
Sbjct: 540 DGIVAFFPSYLYMESIVAAWNDMGILNEVWKNKLIFVETPDANETSIALENYRRACDNGR 599
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL 650
GAV SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 600 GAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFL 659
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDM 710
FDA+R AAQCVGRV+R K D+G+MIFADKR++R DKR+KLP WI ++ + NLSTDM
Sbjct: 660 GFDAMRNAAQCVGRVLRGKTDWGLMIFADKRFARADKRAKLPKWINQYITETASNLSTDM 719
Query: 711 ALHIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
AL +++ F+R ++Q P + I TL D+EK
Sbjct: 720 ALTLSKLFMRTISQNPNENQTGISLWTL---EDIEK 752
>gi|297277341|ref|XP_002808245.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase subunit-like [Macaca mulatta]
Length = 739
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/709 (55%), Positives = 516/709 (72%), Gaps = 5/709 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y + P KLIYC+RTV E+EK +
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L N+ + G L + LSSRKNLC++ V VD C TAS+VRA
Sbjct: 61 EELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRA 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ ++ C F+E ++ LP G+Y L DL+A G++QGWCPYFLAR+ + ANV
Sbjct: 121 QYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANV 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+ NL
Sbjct: 181 VVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLE 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG+IR
Sbjct: 241 TLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL SL+
Sbjct: 301 TAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLH 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DASLA+
Sbjct: 361 TLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAI 420
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ+ +
Sbjct: 421 KPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAI 480
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I ++
Sbjct: 481 SSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRN 540
Query: 563 KLVFIETQDVVETTLALDNYRKA---CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
KL+FIETQD ET++AL+ Y++ C GRGAV S AR K ++GI F HYGR VIMF
Sbjct: 541 KLLFIETQDGAETSVALEKYQEVGVPCXNGRGAVRLSWARVKPSDGIHFMHHYGRAVIMF 600
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FAD
Sbjct: 601 GVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFAD 660
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
KR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 661 KRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 709
>gi|393236508|gb|EJD44056.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 810
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/733 (52%), Positives = 530/733 (72%), Gaps = 10/733 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQYSYM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDNLPIIFPYDRIYPEQYSYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR------HLGPAAKILAIGLSSRKN 114
P KLIYC+RTV E+EK LAELK L Y+ +GL+SRKN
Sbjct: 61 QFFPTKR-KLIYCSRTVPEIEKALAELKRLMAYRIECAETEEERERERAFTGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T + A NP ++ C + + + ++P G
Sbjct: 120 LCLHPEVAKEKKGWVVDARCRDLTCTANCEKARANPGSVPVCTWHDKLGEMEPGNLIPQG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D++A+G+++G CPYF R M+ F +V++YS+ YLLDPKVA +SKE+ K+++VVF
Sbjct: 180 IWTLADVQAYGQEKGVCPYFTIRRMMPFVDVIIYSFHYLLDPKVAEQVSKELSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL- 292
DEAHNIDNVCIE+LS+ + R L+ A R+++R+ +IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVTRLGDQIEEIKKTDASKLQDEYAKLVEGLQ 299
Query: 293 -ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
A +A+++NP LP D+L EAVPGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 EAADARDEDAFIANPILPDDLLTEAVPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAET 359
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
P+SF+ + I+++ LRFC ERL SL+ TLE+T DE +Q + FATLV TY +G
Sbjct: 360 PLSFLQHLKDITFIERRPLRFCAERLQSLVRTLELTRLDEMRSLQKVASFATLVATYEKG 419
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
F +I+EPF+ +P+PV +C D SLA+KP+F+RF SVVITSGT+SP+D+YP++L F
Sbjct: 420 FLLILEPFETDNATVPNPVFHFTCLDPSLAIKPIFERFSSVVITSGTISPLDMYPKMLQF 479
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
PVV ++ M+LTRD P+V+TRGSDQ+ VS++F++R+DP V RN+G +L+E IVPD
Sbjct: 480 TPVVQETYPMTLTRDAFLPLVITRGSDQVAVSSRFEVRNDPAVVRNFGSILIEYSKIVPD 539
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIV FF SY YM+ I+A WND GIL E+ ++KL+F+ET D ET++AL+NYR+AC+ GRG
Sbjct: 540 GIVAFFPSYLYMESIVAAWNDMGILNEVWKNKLIFVETPDANETSIALENYRRACNNGRG 599
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AV SVARGKV+EGIDFD HYGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 600 AVLLSVARGKVSEGIDFDHHYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLG 659
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ D NLSTDMA
Sbjct: 660 FDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITDTASNLSTDMA 719
Query: 712 LHIAREFLRKMAQ 724
+ +++ F+R ++Q
Sbjct: 720 IVLSKLFMRSISQ 732
>gi|58258935|ref|XP_566880.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. neoformans JEC21]
gi|134107057|ref|XP_777841.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260539|gb|EAL23194.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223017|gb|AAW41061.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 799
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/730 (51%), Positives = 530/730 (72%), Gaps = 4/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L D+ V FPYD +YPEQYSYM +LK LDA GHC+LEMP+GTGKT++LLSLI +Y+
Sbjct: 1 MKFMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P N KLIYC+RTV E+EK LAELK L Y+ +GL+SR+NLC++
Sbjct: 61 QFYP-NKRKLIYCSRTVPEIEKALAELKRLMMYRAEMGANDGDFRGLGLTSRRNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPGVYTLQD 179
V + VD+ CR T+++ +P ++ C F E ++PPGVYTL D
Sbjct: 120 VSKEKKGKIVDSRCRDLTSAFACEKGRADPGSVPLCSFHEELNNYEPGNLIPPGVYTLDD 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
++ +G+++G CPYF R M+ F +V++YS+ YLLDPKVA +S EM KES+V+FDEAHNI
Sbjct: 180 VKKYGQEKGVCPYFTIRRMLPFLDVMIYSFHYLLDPKVAEQVSAEMSKESIVIFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGN 297
DNVCIE+LS+ + R L+ A R++++++ +I K TDA +L EY +LVEGL A
Sbjct: 240 DNVCIESLSIDLTRPMLDSAARSVNKLSDKIAEIKETDAKKLEDEYAKLVEGLQEANERV 299
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+ L +P L D++ EA+PGNIR+AEHF+ L+R ++YL+ R+ +V E P SF+A
Sbjct: 300 EDDDMLVSPVLSKDMVDEAIPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFLA 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ IDQ+ L+F ERL L+ TLE+T+ +E +Q + F TLV TY +GF +I+E
Sbjct: 360 HLKEITYIDQRPLKFASERLTCLVRTLELTNLEEHSALQKVAGFGTLVATYEKGFLLILE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P++ +P+P+ +C D SLA+ PVFDRF SVVITSGT+SP+D+YP++L F PV+ +
Sbjct: 420 PYETEHATVPNPIFHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVMEQ 479
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
S+ M+LTR+ PMV+TRGSDQ+P+S++F++R+DP V RN+G +L+EM VPDG+V FF
Sbjct: 480 SYPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIEMARTVPDGVVAFF 539
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+ I++ W D GIL E+ +HKL+F+ET D +ET++AL NYR+AC+ GRGAV SV
Sbjct: 540 PSYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETSIALRNYREACNNGRGAVLLSV 599
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDFD +YGR VIMFG+P+QYT S+IL ARLE+LRD +I+E D+LTFDA+R
Sbjct: 600 ARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMRH 659
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI S++ +AH NLSTD+A+ +A++
Sbjct: 660 AAQCVGRVLRGKTDWGLMVFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKK 719
Query: 718 FLRKMAQPYD 727
F+R+++QP+D
Sbjct: 720 FIRQISQPFD 729
>gi|392575737|gb|EIW68869.1| hypothetical protein TREMEDRAFT_30972 [Tremella mesenterica DSM
1558]
Length = 796
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/730 (51%), Positives = 534/730 (73%), Gaps = 4/730 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPYD IYPEQYSYM +LK+ LDA GHC+LEMP+GTGKT++LLSLI SY+
Sbjct: 1 MKFMIDDLPVLFPYDRIYPEQYSYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVSYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P KLIYC+RTV E+EK LAELK L Y+ +GL+SR+NLC++
Sbjct: 61 QFYPVK-RKLIYCSRTVPEIEKALAELKRLMEYRVEMGAKDEDFRGLGLTSRRNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWV-RALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
V + VD+ CR T+++ AE ++ C + E + ++PPGVYTL D
Sbjct: 120 VSKEKKGKIVDSRCRDLTSAFACEKGRAEPGSVPLCSYHEELNNYETGNLIPPGVYTLDD 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
++ +G+++G CPYF R M+ F ++++YS+ YLLDPKVA +S EM KES+VVFDEAHNI
Sbjct: 180 VKKWGQEKGTCPYFTIRRMMPFVDIIIYSFHYLLDPKVAENVSAEMSKESIVVFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGN 297
DNVCIE+LS+ + R L+ A R++++I+ +IE K TDA +L+ EY +LV GL A
Sbjct: 240 DNVCIESLSIDLTRPMLDSAARSVNKISDKIEEMKRTDATKLQDEYEKLVAGLQEANERR 299
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
L++P L +D+L+EA+PGNIR+AEHF+ L+R ++Y++ R+ +V E P SF+A
Sbjct: 300 EDEDMLASPVLSTDLLEEAMPGNIRKAEHFIAFLKRFIEYMKTRMRVLHVVAETPQSFLA 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ I+++ L+F ERL +L+ TLE+T+ DE +Q + F TLV TY +GF +I+E
Sbjct: 360 HLKEITFIERRPLKFAAERLTNLVRTLELTNIDEHYALQKVAGFGTLVATYEKGFLLILE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P++ +P+P+ ++C D SLA+ PVF+RF SVVITSGT+SP+D+YP++L F P + +
Sbjct: 420 PYETEHATVPNPIFHMTCLDPSLAIAPVFERFSSVVITSGTISPLDMYPKILQFQPTLIQ 479
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
S+ M+LTR+ PMV+TRGSDQ+P+S++F++R+DP V RN+G +L++M VPDGIV FF
Sbjct: 480 SYPMTLTRNAFFPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIDMSKTVPDGIVAFF 539
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+ I++ W D GIL E+ +HKL+F+ET D +ET++AL NYR+AC+ GRGAV SV
Sbjct: 540 PSYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETSVALKNYREACNNGRGAVMLSV 599
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDFD +YGR VIMFG+P+QYT S+IL ARLE+LRD +I+E D+LTFDA+R
Sbjct: 600 ARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMRH 659
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ AH NLSTDMA+ +A++
Sbjct: 660 AAQCVGRVLRGKTDWGLMVFADKRFARQDKRAKLPLWINQYITGAHSNLSTDMAIVLAKK 719
Query: 718 FLRKMAQPYD 727
F+R+++QP+D
Sbjct: 720 FIRQISQPWD 729
>gi|169853182|ref|XP_001833272.1| transcription factor TFIIH complex subunit Rad15 [Coprinopsis
cinerea okayama7#130]
gi|116505650|gb|EAU88545.1| transcription factor TFIIH complex subunit Rad15 [Coprinopsis
cinerea okayama7#130]
Length = 789
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/754 (51%), Positives = 538/754 (71%), Gaps = 13/754 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFYIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA------KILAIGLSSRKN 114
P KL+YC+RTV E+EK L ELK L Y+ + + +GL+SRKN
Sbjct: 61 QFFPTRR-KLVYCSRTVPEIEKALTELKRLMKYRIDYAETEEEKEKERNFMGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC+N V + VDA CR T + V ENP ++ C++ EN K ++P G
Sbjct: 120 LCINPDVAREKKGTVVDARCRDLTNTAVCEKNRENPGSVPVCDWHENLGKMEPGTLIPQG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL+ + + +Q+ CPYF R M+ FA++V+YSY YLLDPKVA +SK++ K+++VVF
Sbjct: 180 IWTLEGVLEYARQKVICPYFAVRRMMGFADIVIYSYHYLLDPKVAEQVSKDISKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHNIDNVCIE+LS+ + R L+ A R++++++++I+ K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVTKLSEKIDEIKTTDAAKLQNEYAKLVEGLQ 299
Query: 294 -LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGP 352
+ + + NP LP D+L EA+PGNIR+AEHF+ L+R V+YL+ R+ +V E P
Sbjct: 300 EAEESDTDGIMGNPVLPDDLLHEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVTHVVAETP 359
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGF 412
+SF+ + I+++ LRFC ERL SL+ TLE+ DE+ +Q + FATLV TY +GF
Sbjct: 360 LSFLQHLKDITYIERRPLRFCAERLQSLVRTLELNRLDEYSSLQKVASFATLVATYEKGF 419
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH 472
+I+EP++ + +P+ L+C D SLA+KPVF+RF SVVITSGT+SP+D+YP++L F
Sbjct: 420 LLILEPYETDTSTVANPIFHLTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKMLQFT 479
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
PVV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +LVE IVPDG
Sbjct: 480 PVVQETYPMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDG 539
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA 592
+V FF SY YM+ I+A WND GIL E+ +HKL+F+ET D ET++AL+NYR+ACD GRGA
Sbjct: 540 VVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGA 599
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF 652
V SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL F
Sbjct: 600 VLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGF 659
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
DA+R AAQCVGRV+R K D+G+MIFADKR++R DKRSKLP WI + + NLSTDMAL
Sbjct: 660 DAMRTAAQCVGRVLRGKTDWGLMIFADKRFARSDKRSKLPRWINQCITETASNLSTDMAL 719
Query: 713 HIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
+++ F+R ++Q P + + TL D+EK
Sbjct: 720 TLSKLFMRTISQNPNENQTGVSLWTL---EDVEK 750
>gi|170087262|ref|XP_001874854.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650054|gb|EDR14295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 759
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/736 (52%), Positives = 533/736 (72%), Gaps = 13/736 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL-GPAAK-----ILAIGLSSRKN 114
P KL+YC+RTV E+EK LAELK L Y+ H P K + +GL+SRKN
Sbjct: 61 QFYPTR-RKLVYCSRTVPEIEKALAELKRLMAYRISHAETPEEKEKERSFMGMGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPN-IETCEFFENYEKAASAAVLPPG 173
LC++ + + VDA CR T + V +P+ +E C + E K ++P G
Sbjct: 120 LCIHPEISKEKKGRVVDARCRDLTNAAVCEKGRADPDSVELCSWHEELGKLEPGNLIPQG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHM--VQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
++TL D+ +G+ +G CPYF R M + FA+V++YS+ YLLDPKVA +SKEM K+++V
Sbjct: 180 IWTLADILEYGRDKGVCPYFAVRRMASMAFADVIIYSFHYLLDPKVAEQVSKEMSKDAIV 239
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIER--FKATDAGRLRAEYNRLV 289
VFDEAHNIDNVCIE+LS+ + R L+ ATR++ ++ ++IE K TDA +L+ EY +LV
Sbjct: 240 VFDEAHNIDNVCIESLSIDLTRPMLDSATRSVVKLGEKIEEQVIKITDAAKLQDEYAKLV 299
Query: 290 EGLALRGNLP-NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
EGL G +A++ NP LP D+L EAVPGNIR+AEHF+ L+R V+YL+ R+ +V
Sbjct: 300 EGLQEPGGEDGDAFMGNPLLPEDLLNEAVPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVV 359
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY 408
E P+SF+ + I+++ LRFC ERL SL+ TLE+ DE+ +Q + FATLV TY
Sbjct: 360 AETPLSFLQHLKDITYIERRPLRFCAERLQSLIRTLELNRLDEYASLQKVASFATLVSTY 419
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
+GF +I+EPF+ +P+P+ +C D SLA+KPVF+RF SVVITSGTLSP+D+YP++
Sbjct: 420 EKGFLLILEPFETDNATVPNPIFHFTCLDPSLAIKPVFERFSSVVITSGTLSPLDMYPKM 479
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSI 528
L F PVV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E I
Sbjct: 480 LQFTPVVQETYPMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKI 539
Query: 529 VPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDC 588
VPDGIV FF SY YM+ I+A WND GIL E+ ++KL+F+ET D ET++AL+NYR+ACD
Sbjct: 540 VPDGIVAFFPSYLYMESIVAAWNDMGILNEVWKNKLIFVETPDANETSIALENYRRACDN 599
Query: 589 GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD 648
GRGAV SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +
Sbjct: 600 GRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESE 659
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST 708
FL FDA+R AAQCVGRV+R K D+G+MIFADKR++R DKR+KLP WI ++ + NLST
Sbjct: 660 FLGFDAMRNAAQCVGRVLRGKTDWGLMIFADKRFARADKRAKLPRWINQYITETASNLST 719
Query: 709 DMALHIAREFLRKMAQ 724
DMAL +++ F+R ++Q
Sbjct: 720 DMALTLSKLFMRTISQ 735
>gi|196006780|ref|XP_002113256.1| hypothetical protein TRIADDRAFT_50379 [Trichoplax adhaerens]
gi|190583660|gb|EDV23730.1| hypothetical protein TRIADDRAFT_50379 [Trichoplax adhaerens]
Length = 720
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/746 (53%), Positives = 530/746 (71%), Gaps = 42/746 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQYSYM ELKRALDAKGHC LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIDGLLVYFPYDYIYPEQYSYMCELKRALDAKGHCALEMPSGTGKTISLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P + KLIYC+RTV E+EK L E+K+L Y + G K L +GLS+RKNLC++
Sbjct: 61 KVYPLHITKLIYCSRTVPEIEKALEEMKILLEYYEKQTGEKQKFLGLGLSARKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+ + VD C TAS+VR ++ ++E C FFE ++ +VLPPGVY L DL
Sbjct: 121 ISKERDGKVVDGRCLGLTASYVRRNHQQDRSVEVCSFFEKFDTFGRDSVLPPGVYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG +QGWCPYFLARH + ANVVVYSY YLLDPK+A ++SKEM K+SVVVFDEAHNID
Sbjct: 181 KDFGAKQGWCPYFLARHSILHANVVVYSYYYLLDPKIADLVSKEMSKQSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIE+++V + R+T++ L +++++++ K TD +L+ EY RLVEG+ L +P+
Sbjct: 241 NVCIESMTVKISRKTIDRCQTALDVMDKKVKKIKETDKKKLQEEYRRLVEGIYL---IPD 297
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
++ L +++ +VQ E P+SF+ I
Sbjct: 298 KTIA-----------------------LLIVQHVVQ-------------ETPMSFLHHIK 321
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
ID+K LRFC ERL SLM TLEI + EF + FATLV TY++GF++IIEPFD
Sbjct: 322 ETVCIDRKPLRFCSERLQSLMHTLEIINNSEFAALAAAASFATLVSTYSKGFTLIIEPFD 381
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
+R P IPDPVL SC DAS+A+KPVFDRFQSVVITSGTLSP+D+YP++LNF PV S+
Sbjct: 382 DRAPTIPDPVLHFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMYPKILNFRPVSMSSYT 441
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R +CP+++TRG+DQ+ +S+KF+ R D V RNYG LL E+ + VPDG+VCFF SY
Sbjct: 442 MTLARPSLCPLIVTRGNDQVTISSKFESREDIAVMRNYGNLLAELTASVPDGVVCFFPSY 501
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
+YM+ +++ W D GI+ I+++KL+FIETQD+ ET LAL+NY KAC+ GRGAV SVARG
Sbjct: 502 TYMESVVSFWCDQGIMNNIIRNKLLFIETQDLAETVLALENYYKACENGRGAVLLSVARG 561
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDFD HYGR V+MFG+P+ YT S+ L ARL+YLR+ +QI+E DFLTFDA+R AAQ
Sbjct: 562 KVSEGIDFDHHYGRAVLMFGIPYVYTQSRKLRARLDYLRENYQIRENDFLTFDAMRHAAQ 621
Query: 661 --CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
CVGR IR K+DYG+M+FADKRYSR DK+ KLP WI +L+D+ +L+TD A+ I+++F
Sbjct: 622 ASCVGRAIRGKSDYGIMVFADKRYSRLDKKGKLPKWIQEYLKDSVCDLTTDEAVQISKKF 681
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
LR+MA P++K +G +LL+ LE
Sbjct: 682 LRQMAAPFNKEDQLGL-SLLTLEQLE 706
>gi|336364077|gb|EGN92441.1| hypothetical protein SERLA73DRAFT_99245 [Serpula lacrymans var.
lacrymans S7.3]
Length = 793
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/756 (51%), Positives = 540/756 (71%), Gaps = 15/756 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ + FPYD IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR-HLGPAAK-----ILAIGLSSRKN 114
P KLIYC+RTV E+EK LAELK L Y+ P K +GL+SRKN
Sbjct: 61 QFYPTR-RKLIYCSRTVPEIEKALAELKRLVEYRISCAETPEEKEKEQNFTGLGLTSRKN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ V + VDA CR T + V A ++P +++ C++ EN + ++ PG
Sbjct: 120 LCIHPEVSKEKKGKVVDARCRDLTNTAVCEKARQDPGSVDICDWHENLGQLEPGNLITPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++TL D+ G+ CPYF R M+ F +VV+YS+ YLLDPKVA +SKE+ K+++VVF
Sbjct: 180 IWTLADVLQHGRDNKLCPYFTIRRMMPFVDVVIYSFHYLLDPKVAEQVSKELSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL- 292
DEAHNIDNVCIE+LS+ + R L+ A R+++++ ++IE K TDA +L+ EY +LVEGL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAARSVTKLGEKIEEIKTTDAAKLQDEYAKLVEGLE 299
Query: 293 --ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKE 350
A + ++SNP LP D+L EA+PGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 EPASEAADEDNFMSNPVLPDDLLNEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAE 359
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTR 410
P+SF+ + I+++ LRFC ERL S++ TLE+ DE+ +Q + FATLV TY +
Sbjct: 360 TPLSFLQHLKDITYIERRPLRFCAERLQSMIRTLELNRLDEYSSLQKVASFATLVATYEK 419
Query: 411 GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN 470
GF +I+EPF+ +P+P+ +C D SLA+KPVF+RF SVVITSGT+SP+D+YP++L
Sbjct: 420 GFLLILEPFETDNATVPNPIFHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKMLQ 479
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
F PVV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVP
Sbjct: 480 FTPVVQETYPMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVP 539
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
DGIV FF SY YM+ I+A WND GIL E+ ++KL+F+ET D ET++AL+NYR+ACD GR
Sbjct: 540 DGIVAFFPSYLYMESIVAAWNDMGILNEVWKNKLIFVETPDANETSIALENYRRACDNGR 599
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL 650
GAV SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+IL ARLEYLRD ++I+E +FL
Sbjct: 600 GAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFL 659
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDM 710
FDA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI ++ + NLSTDM
Sbjct: 660 GFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITEVASNLSTDM 719
Query: 711 ALHIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
AL +++ F+R ++Q P + I TL D+EK
Sbjct: 720 ALTLSKLFMRTISQNPNENQTGISLWTL---EDIEK 752
>gi|209879600|ref|XP_002141240.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556846|gb|EEA06891.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 835
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/827 (48%), Positives = 552/827 (66%), Gaps = 98/827 (11%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F +E+V V+FPYD +YPEQ YM LK+ LDA H +LEMPTGTGKT+ L S ITSY L+
Sbjct: 4 FFIEEVEVFFPYDYVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLFSFITSYQLA 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP---------------------A 101
P N +LIYCTRTV EMEK L ELK + NY+ + L
Sbjct: 64 HP-NLGRLIYCTRTVAEMEKALLELKTVINYRIKELQKDKLALQETNNINISTSENQILN 122
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN------------ 149
ILAIG+S+R+NLC+NS V++ +RD +DA CR TA WVRA +
Sbjct: 123 GSILAIGMSARRNLCINSSVISNSDRDKIDAMCRSMTAPWVRAKKSSTRLDNDKSGTQVI 182
Query: 150 -----PNIET---------CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQ--------- 186
+IE C ++E ++K S+ +P GVYT+ +LR FGK+
Sbjct: 183 DQSSLQDIEDIIQGNCTDLCPYYEIFDKIWSSDTIPIGVYTIDELRRFGKEWEHPTLKKN 242
Query: 187 QGWCPYFLARHMVQFANVVVYSYQYLLDPKVA------GIISKEM--------------- 225
+CPY+ + ++Q A VVV +YQY LDPKVA G +S+
Sbjct: 243 TPFCPYYSTKRLIQVAKVVVLNYQYTLDPKVAQASLLGGTVSQGFSHGSNINGKQAGSSY 302
Query: 226 -----------QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
++ S+VVFDEAHNIDN+C EALSV++ RQ L+GA+RNL + EI +
Sbjct: 303 AAALDPELLGSKEPSIVVFDEAHNIDNICTEALSVNINRQVLDGASRNLKSLKNEINKLT 362
Query: 275 ATDAGRLRAEYNRLVEGLALRGNLPNAWLSN-----PALPSDI---LKEAVPGNIRRAEH 326
D RL+ EYNRLV GL G + + + P LP+++ KE +PG+IR+AEH
Sbjct: 363 EIDEKRLQEEYNRLVRGLKSTGQIEDDLVLEELQRFPVLPAEVEKLKKELIPGSIRKAEH 422
Query: 327 FLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEI 386
FL +++++ YL+ + + EGP++F+ + + ID +RFC ERL SLM TL+I
Sbjct: 423 FLLIMKKITLYLQNYIRVFTPKIEGPLTFLNHLESSCMIDVNIIRFCDERLRSLMNTLQI 482
Query: 387 TDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
D D++ I+ +C F T++GTY++GF II++P+ E + + DP++QLSC D+S+A+KP+
Sbjct: 483 IDMDQYSPIELVCTFCTILGTYSKGFVIIVDPYPE-VTGLYDPIIQLSCLDSSIAMKPIL 541
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
DR+QS+V+TSGTLSP+DLYP+LL F PVVS S M+L R CICPM++TRGSDQ+P+S+++
Sbjct: 542 DRYQSIVLTSGTLSPLDLYPKLLGFDPVVSESLSMTLDRTCICPMIVTRGSDQVPLSSRY 601
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
+ R D + +NYGKL++E+ VPDGIVCFF SY YM++++ W +SGIL +IM+HKLVF
Sbjct: 602 ESREDSIIQQNYGKLVLEISKKVPDGIVCFFPSYLYMEQVLGQWYESGILAQIMEHKLVF 661
Query: 567 IETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
+ET+D+V TTLAL ++RKACD GRG +FFS+ARGKVAEGIDFDRHYGR VI+ G+P+QYT
Sbjct: 662 VETKDIVSTTLALHHFRKACDIGRGGIFFSIARGKVAEGIDFDRHYGRCVILVGIPYQYT 721
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
LS+IL +RL +L++ + I+E +FLTFDA+RQA+QCVGR+IRSKADYG+MI AD+RYS+ D
Sbjct: 722 LSRILQSRLSFLKENYNIEENEFLTFDAMRQASQCVGRIIRSKADYGLMILADQRYSKKD 781
Query: 687 KRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
KR KLP WIL +L+ + +LSTDMA++IA FL++M+QPY K S+
Sbjct: 782 KREKLPPWILKYLKQEYCSLSTDMAVNIALSFLKQMSQPYKKQLSMA 828
>gi|339236173|ref|XP_003379641.1| TFIIH basal transcription factor complex helicase subunit
[Trichinella spiralis]
gi|316977682|gb|EFV60753.1| TFIIH basal transcription factor complex helicase subunit
[Trichinella spiralis]
Length = 777
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/775 (49%), Positives = 535/775 (69%), Gaps = 34/775 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ ++V FPY+ IYPEQY YML+LKR LDA+GHCLLEMP+GTGKT +LLSL+ +YV
Sbjct: 16 MRIDVDGLSVIFPYEFIYPEQYYYMLQLKRTLDARGHCLLEMPSGTGKTASLLSLVIAYV 75
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RT+ E+ K + EL+ L + + G + I+ + +S+RKN+C++
Sbjct: 76 KAYPSQLEKLIYCSRTIPEISKVVEELRHLCDSYEKETGESLNIVGLAMSARKNMCIHPE 135
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C T+S+VRA ++P+I C +FE + + + LP GVY L DL
Sbjct: 136 VSKLRLGKIVDGHCLSLTSSFVRARRLDDPSIPCCNYFEEFMEEGVESALPRGVYNLDDL 195
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A+G++ GWCPYF+ARH + A+V+VYSY YLLDPK+A +ISK++ + SVVVFDEAHNID
Sbjct: 196 KAYGRRMGWCPYFVARHALLRADVIVYSYHYLLDPKIAELISKDLSRRSVVVFDEAHNID 255
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL-- 298
NVCIE+LSV+++++T+E NL + + ++ K D L EY RLVEGL +L
Sbjct: 256 NVCIESLSVTLKKRTIERCQENLESLQKFVKETKERDVAHLDREYKRLVEGLREAKHLRD 315
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ L+NP LP DIL+EAVPG+IR AEHF+ LRR + Y++ R+ + +V E P F++
Sbjct: 316 TDKILANPVLPDDILEEAVPGSIRNAEHFIAFLRRFLNYVKHRMSSNSVMIENPAVFLSD 375
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE++DT F + + +FATLV TY +GF ++ EP
Sbjct: 376 VQIRTAIERKPLRFCSERLASLLRTLELSDTSNFAPLILLANFATLVSTYAKGFCLLFEP 435
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FDE++P +P+PV+ SC DAS+A++P TLSP+D+YP++LNF P V S
Sbjct: 436 FDEKLPTVPNPVMTFSCMDASIAIRP-------------TLSPLDMYPKILNFDPAVMAS 482
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R CI P+++ +G+DQ+ +++KF+ R D V RNYG LL+E+ IVPDGIVCFF
Sbjct: 483 FSMTLARPCILPLIVAKGNDQITMTSKFEARDDTSVIRNYGTLLLELSRIVPDGIVCFFT 542
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A W GI+ IM++KL+FIETQD++ET+LAL NY KAC+ GRGA+ SVA
Sbjct: 543 SYMYMENTVAFWYKQGIIDRIMKNKLLFIETQDIIETSLALQNYIKACENGRGAILLSVA 602
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EG+DF H GR V+M GVP+ YT S+I+ ARLEYLRD F IKE DFLTFDA+RQA
Sbjct: 603 RGKVSEGVDFSDHLGRAVVMLGVPYVYTESRIIRARLEYLRDQFNIKENDFLTFDAMRQA 662
Query: 659 AQCVGRVIRSKADYGMMIFADK------------RYSRHDKRSKLPGWILSHLRDAHLNL 706
AQCVGR +R+K DYG+MIFADK RYSR DKR KLP WI L ++L+L
Sbjct: 663 AQCVGRALRNKTDYGLMIFADKAFRVLNDGTVLQRYSRSDKREKLPKWIQEQLSASNLDL 722
Query: 707 STDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADL------EKMTNDGSINEM 755
S + AL I+R +LR MAQP+ + +G ++L+Q + K+TN+ + E+
Sbjct: 723 SIEEALQISRRWLRTMAQPFTQNDQLG-ISMLNQTQITDEQMKRKLTNEAYLMEL 776
>gi|297705154|ref|XP_002829448.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Pongo abelii]
Length = 724
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/692 (54%), Positives = 507/692 (73%), Gaps = 2/692 (0%)
Query: 39 LLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL 98
+LEMP+GTGKT++LL+LI +Y + P KLIYC+RTV E+EK + EL+ L N+ +
Sbjct: 3 VLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQE 62
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFF 158
G + L + LSSRKNLC++ V VD C TAS+VRA + ++ C F+
Sbjct: 63 GEKLQFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFY 122
Query: 159 ENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVA 218
E ++ L G+Y L DL+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A
Sbjct: 123 EEFDAHGREVPLSAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIA 182
Query: 219 GIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA 278
++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+ NL + + + R K TD
Sbjct: 183 DLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDE 242
Query: 279 GRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQ 336
RLR EY RLVEGL A +A L+NP LP ++L+EAVPG+IR AEHFL LRRL++
Sbjct: 243 QRLRDEYRRLVEGLREASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLE 302
Query: 337 YLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQ 396
Y++ RL ++V +E P +F++ + I +K LRFC ERL SL+ TLEITD +F +
Sbjct: 303 YVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLYTLEITDLADFSPLT 362
Query: 397 TICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITS 456
+ +FATLV TY +GF+IIIEPFD+R P I +P+L SC DASLA+KPVF+RFQSV+ITS
Sbjct: 363 LLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITS 422
Query: 457 GTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
GTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V R
Sbjct: 423 GTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIR 482
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
NYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I ++KL+FIETQD ET+
Sbjct: 483 NYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETS 542
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
+AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMFGVP+ YT S+IL AR +
Sbjct: 543 VALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARKK 602
Query: 637 YLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIL 696
YLRD FQI+E DFLT D +R AAQ VGR IR K DYG+M+FADKR++R DKR KLP WI
Sbjct: 603 YLRDQFQIRENDFLTLDTMRHAAQXVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQ 662
Query: 697 SHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 663 EHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 694
>gi|268570745|ref|XP_002640826.1| Hypothetical protein CBG15713 [Caenorhabditis briggsae]
Length = 755
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/754 (51%), Positives = 542/754 (71%), Gaps = 17/754 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPYD +YPEQ YM E+K+ALDA GH LLEMP+GTGKT++LLSL+ SY+
Sbjct: 1 MQLDIDGLKVLFPYDYVYPEQVLYMKEVKKALDANGHGLLEMPSGTGKTVSLLSLVLSYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-PAAKILAIGLSSRKNLCVNS 119
+S P+ KL+YC+RT+ E+EK + E+K+L++Y + G P AKI + +S+RKNLC+N
Sbjct: 61 ISYPDRLDKLVYCSRTIPEIEKCVEEMKVLYDYWEKETGVPVAKI-TVAMSARKNLCINE 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
+V A ++VD+AC+K T+S VRA EN IE C+FFEN+E A+ + GV+ L+D
Sbjct: 120 KVAALRFGNTVDSACQKLTSSSVRAKRQENSEIEGCDFFENFE--ANGFPMQNGVWNLED 177
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
LR G+++ CPYF AR+ + A++VVYSY Y+LDPK+A ++SK+ ++SVVVFDEAHNI
Sbjct: 178 LRQLGRERKICPYFTARNAINRAHIVVYSYHYILDPKIAELVSKDFSRKSVVVFDEAHNI 237
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGN 297
DNVCIE++SV++ ++ + A + L + Q + R K+ ++ +L+ EY++LVEGL A R
Sbjct: 238 DNVCIESMSVAISQKNADRALQELQNLEQVVGRIKSANSEKLQNEYDKLVEGLKRAERER 297
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+ L+NP +P DILKEAVPGNIR+A HFL L+R V+Y+R RL T V E P +F+
Sbjct: 298 ANDERLANPCIPDDILKEAVPGNIRQANHFLLFLKRFVEYVRHRLRTHQVLIESPAAFMK 357
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
I I+++ +RFC ERL +L+ TLEITD + + + TLV TY++GFS+I+E
Sbjct: 358 DIQERMCIERRPMRFCAERLANLVRTLEITDNGDVWALSQVTTMCTLVSTYSKGFSVIVE 417
Query: 418 PFD-ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
P D +M I LSCHDAS+A++PV R QSV+ITSGTLSP+++YP++L+F P V
Sbjct: 418 PQDGSQMATIT-----LSCHDASIAIRPVLHRHQSVIITSGTLSPLEMYPKILDFDPAVV 472
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
SF M+L R C+ P+V+ RG+DQ+ ++++F+ R+D V RNYG L++EM S+VPDG+V F
Sbjct: 473 ASFTMTLARPCLAPLVVARGNDQVAMTSRFEQRADVAVIRNYGNLVLEMASLVPDGMVVF 532
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ +I W + I+ E+M++KL+FIET D +ET+ AL+ Y +ACD GRGAV FS
Sbjct: 533 FTSYLYMENVIGVWYEQHIIDELMKYKLLFIETNDALETSAALEKYVEACDSGRGAVLFS 592
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDF H GR VIM G+P+ YT S++L ARLEYLRD+F I+E DFLTFDA+R
Sbjct: 593 VARGKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEYLRDSFGIRENDFLTFDAMR 652
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AQC+GR +RSK DYG+M+FADKR+SR DKR KLP W+ +L A NLS D A +AR
Sbjct: 653 HTAQCMGRALRSKTDYGLMVFADKRFSRQDKRGKLPRWMQEYLETASTNLSIDEAAQVAR 712
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDG 750
+L MAQP++K +G +LL++ +M DG
Sbjct: 713 RWLTLMAQPFEKEHQLG-VSLLNR----EMVQDG 741
>gi|66362610|ref|XP_628271.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
gi|46229591|gb|EAK90409.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
Length = 841
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/835 (48%), Positives = 554/835 (66%), Gaps = 107/835 (12%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F +E++ V+FPYDN+YPEQ YM LK+ LDA H +LEMPTGTGKT+ LLS ITSY L
Sbjct: 4 FFIEELEVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLV 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG----------------------- 99
P N KLIYCTRTV EMEK L ELK + +Y + +
Sbjct: 64 HP-NMGKLIYCTRTVAEMEKALQELKTVVDYCKKEIENDKIKLEQEIKSENNSSLASVSE 122
Query: 100 ---PAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL----------- 145
AA IL IG+++R+N+C+N RV +RD +D+ CR TA WVRA
Sbjct: 123 SRFSAASILGIGMTARRNMCINPRVSVHADRDKIDSMCRSMTAPWVRAKHQMEARERSAL 182
Query: 146 ---------AAENPNIET---------CEFFENYEKAASAAVLPPGVYTLQDLRAF---- 183
E +IE C ++E YE+ S+ ++P G+YT+ + + F
Sbjct: 183 SEGDANSSKMTEIADIEEMLESGCTTLCPYYEAYERVWSSDLVPTGIYTIDEFKDFSKNW 242
Query: 184 -----GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVA-------GIISK-------- 223
GK+ +CPYF ++ ++Q A VVV +YQY+LDPKVA G +S+
Sbjct: 243 EHPILGKKIQFCPYFASKRLIQTAKVVVLNYQYILDPKVAQASLLGGGTVSQGFSHGANP 302
Query: 224 -----------------EMQKE-SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
E KE SVVVFDEAHNIDNVCIEALSV++ RQ L GA RNL
Sbjct: 303 NGLSLGSKFAASLLPEQEGTKEPSVVVFDEAHNIDNVCIEALSVNMNRQILSGAARNLRT 362
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN-AWLSN----PALPSD---ILKEAV 317
+ EIE + D RL+ EY RL++GL G + + A L + P LP + I K +
Sbjct: 363 LKSEIESLSSLDEQRLQDEYTRLIQGLRNSGQVQDEAVLEDLERFPVLPEEMEKIKKGLI 422
Query: 318 PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL 377
PG+IRRAEHF+ ++++L+ YL+ + + EGP++FV I A I L+FC ERL
Sbjct: 423 PGSIRRAEHFITIMKKLILYLQEYIRVYSTRIEGPLTFVKHIEASCYIQSGLLKFCDERL 482
Query: 378 HSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHD 437
SL+ TL I D+D++ ++ +C F T++G+Y++GF +I++P+ E + + DPV+QLSC D
Sbjct: 483 RSLLNTLRIVDSDQYSSLELVCTFFTILGSYSKGFIVIVDPYPE-VSGLYDPVIQLSCLD 541
Query: 438 ASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGS 497
+S+A++P+ R+QS+V+TSGTLSP+DLYP+LL F PVVS+S M+L R CICP+++TRGS
Sbjct: 542 SSIAMRPILKRYQSIVLTSGTLSPLDLYPKLLGFIPVVSQSLTMTLDRTCICPLIVTRGS 601
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
DQ P+S+KF+ R+D + +NYGKL++E+ VPDG+VCFF SY YM+++++ W +SG+L
Sbjct: 602 DQTPLSSKFESRADVSIQQNYGKLILEITKKVPDGVVCFFSSYLYMEQMLSQWYESGLLA 661
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
+IM+HKLVF+ET+D+V TTLAL +YRKACD GRGA+FFS+ARGKVAEGIDFDRHYGR V+
Sbjct: 662 QIMEHKLVFVETKDIVSTTLALHHYRKACDIGRGAIFFSIARGKVAEGIDFDRHYGRCVV 721
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIF 677
M G+P+QYTLSKIL +RL +L++ + I+E +FLTFDA+RQA+QCVGRVIRSKADYG+MIF
Sbjct: 722 MVGIPYQYTLSKILQSRLSFLKENYGIQENEFLTFDAMRQASQCVGRVIRSKADYGLMIF 781
Query: 678 ADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSI 732
AD RY++ DKR K+P WIL HL+ + LSTDMA+ I+ FL++M+QPY + SI
Sbjct: 782 ADLRYNKKDKREKIPPWILKHLKPEYSTLSTDMAVSISSNFLKQMSQPYAVSNSI 836
>gi|67601888|ref|XP_666434.1| DNA repair protein-related [Cryptosporidium hominis TU502]
gi|54657424|gb|EAL36199.1| DNA repair protein-related [Cryptosporidium hominis]
Length = 841
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/835 (48%), Positives = 554/835 (66%), Gaps = 107/835 (12%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F +E++ V+FPYDN+YPEQ YM LK+ LDA H +LEMPTGTGKT+ LLS ITSY L
Sbjct: 4 FFIEELEVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSYQLV 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG----------------------- 99
P N KLIYCTRTV EMEK L ELK + +Y + +
Sbjct: 64 HP-NMGKLIYCTRTVAEMEKALQELKTVVDYCKKEIENDKIKLELEIKSENNSSFASVSE 122
Query: 100 ---PAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL----------- 145
AA IL IG+++R+N+C+N RV +RD +D+ CR TA WVRA
Sbjct: 123 SRLSAASILGIGMTARRNMCINPRVSVHADRDKIDSMCRSMTAPWVRAKHQMEARERNAL 182
Query: 146 ---------AAENPNIET---------CEFFENYEKAASAAVLPPGVYTLQDLRAF---- 183
E +IE C ++E YE+ S+ ++P G+YT+ + + F
Sbjct: 183 SEGDTNSSKMTEIADIEEMLESGCTTLCPYYEAYERVWSSDLVPTGIYTIDEFKDFSKNW 242
Query: 184 -----GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVA-------GIISK-------- 223
GK+ +CPYF ++ ++Q A VVV +YQY+LDPKVA G +S+
Sbjct: 243 EHPILGKKIQFCPYFASKRLIQTAKVVVLNYQYILDPKVAQASLLGGGTVSQGFSHGANP 302
Query: 224 -----------------EMQKE-SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
E KE SVVVFDEAHNIDNVCIEALSV++ RQ L GA RNL
Sbjct: 303 NGLSLGSKFAASLLPEQEGTKEPSVVVFDEAHNIDNVCIEALSVNMNRQILSGAARNLRT 362
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN-AWLSN----PALPSD---ILKEAV 317
+ EIE + D RL+ EY RL++GL G + + A L + P LP + I K +
Sbjct: 363 LKSEIESLSSLDEQRLQDEYTRLIQGLRNSGQVQDEAVLEDLERFPVLPEEMEKIKKGLI 422
Query: 318 PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL 377
PG+IRRAEHF+ ++++L+ YL+ + + EGP++FV I A I L+FC ERL
Sbjct: 423 PGSIRRAEHFITIMKKLILYLQEYIRVYSTRIEGPLTFVKHIEASCYIQSGLLKFCDERL 482
Query: 378 HSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHD 437
SL+ TL I D+D++ ++ +C F T++G+Y++GF +I++P+ E + + DPV+QLSC D
Sbjct: 483 RSLLNTLRIVDSDQYSSLELVCTFFTILGSYSKGFIVIVDPYPE-VSGLYDPVIQLSCLD 541
Query: 438 ASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGS 497
+S+A++P+ R+QS+V+TSGTLSP+DLYP+LL F PVVS+S M+L R CICP+++TRGS
Sbjct: 542 SSIAMRPILKRYQSIVLTSGTLSPLDLYPKLLGFIPVVSQSLTMTLDRTCICPLIVTRGS 601
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
DQ P+S+KF+ R+D + +NYGKL++E+ VPDG+VCFF SY YM+++++ W +SG+L
Sbjct: 602 DQTPLSSKFESRADVSIQQNYGKLILEITKKVPDGVVCFFSSYLYMEQMLSQWYESGLLA 661
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
+IM+HKLVF+ET+D+V TTLAL +YRKACD GRGA+FFS+ARGKVAEGIDFDRHYGR V+
Sbjct: 662 QIMEHKLVFVETKDIVSTTLALHHYRKACDIGRGAIFFSIARGKVAEGIDFDRHYGRCVV 721
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIF 677
M G+P+QYTLSKIL +RL +L++ + I+E +FLTFDA+RQA+QCVGRVIRSKADYG+MIF
Sbjct: 722 MVGIPYQYTLSKILQSRLSFLKENYGIQENEFLTFDAMRQASQCVGRVIRSKADYGLMIF 781
Query: 678 ADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSI 732
AD RY++ DKR K+P WIL HL+ + LSTDMA+ I+ FL++M+QPY + SI
Sbjct: 782 ADLRYNKKDKREKIPPWILKHLKPEYSTLSTDMAVSISSNFLKQMSQPYAVSNSI 836
>gi|426243940|ref|XP_004015798.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Ovis aries]
Length = 759
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/728 (53%), Positives = 508/728 (69%), Gaps = 43/728 (5%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y +
Sbjct: 43 LNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRA 102
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L ++ + G L + LSSRKNLC++ V
Sbjct: 103 YPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPEVT 162
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL+A
Sbjct: 163 PLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDLKA 222
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 223 VGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 282
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPN 300
CI+++SV++ R+TL+ NL + + + R+K TD RLR EY RLVEGL A +
Sbjct: 283 CIDSMSVNLTRRTLDRCQANLETLQKTVLRYKETDEQRLREEYRRLVEGLREASAARETD 342
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
A L+NP LP ++LK GP+ I
Sbjct: 343 AHLANPVLPDEVLK------------------------------------GPL-----IA 361
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
+ LRFC ERL SL+ TLEI+D +F + + +FATLV TY +GF+IIIEPFD
Sbjct: 362 PQPLGRSQPLRFCAERLRSLLHTLEISDLTDFSPLTLLANFATLVSTYAKGFTIIIEPFD 421
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F
Sbjct: 422 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFT 481
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY
Sbjct: 482 MTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSY 541
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARG
Sbjct: 542 QYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARG 601
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQ
Sbjct: 602 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQ 661
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
CVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR
Sbjct: 662 CVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLR 721
Query: 721 KMAQPYDK 728
+MAQP+ +
Sbjct: 722 QMAQPFHR 729
>gi|115492105|ref|XP_001210680.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
gi|114197540|gb|EAU39240.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
Length = 790
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/756 (50%), Positives = 528/756 (69%), Gaps = 6/756 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L PE+ KLIYC+RT+ E+EK LAELK L ++ + LG A+GL+SRKNLC++
Sbjct: 61 LHYPEHR-KLIYCSRTMSEIEKALAELKALMKFRAKELGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCTYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ F NV++YSY YLLDPK+A +S+E K+ +VVFDEAHNID
Sbjct: 180 IKYGEQHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSREFSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + ++I K++DA +L+ EY +LVEGL A +
Sbjct: 240 NVCIESLSIDITEDSLRKATRGANNLERKITEMKSSDAEKLQNEYTKLVEGLREAEQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 VKDLTYIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVATYDKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESEAATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFTTVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +++E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ F VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGAILFCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KRS+LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRSQLPKWISQAMLESETNLSTDMAVATAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINE 754
LR MAQP+ G T S ADLE+ + E
Sbjct: 718 LRTMAQPFKAKDQEGIST-WSLADLERHREKQKVEE 752
>gi|295671522|ref|XP_002796308.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284441|gb|EEH40007.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 797
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/747 (51%), Positives = 523/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
KPE KLIYC+RT+ E+EK LAELK L Y+ + LG +GL+SRKNLC++
Sbjct: 61 QHKPEQR-KLIYCSRTMSEIEKALAELKALMKYRAQQLGYTEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + + ++PPGV+TL D+
Sbjct: 120 VKREKSGTIVDARCRSMTAGFVKEKKERGEDVELCIYHENLDLLEPSNLVPPGVFTLDDM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF R M+ F NV++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNID
Sbjct: 180 LKYGEQHKQCPYFSVRRMMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A+R + + + I+ K+ DA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKASRGANNLERRIDEMKSLDAEKLQNEYQKLVEGLREADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+A
Sbjct: 300 EEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFTTVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDGIV FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDSQESSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRTVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRAQLPKWISQAMLESETNLSTDMAMATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S ADLE+
Sbjct: 718 LRTMAQPFKSKDQEGIST-WSIADLER 743
>gi|169763188|ref|XP_001727494.1| DNA repair helicase rad15 [Aspergillus oryzae RIB40]
gi|83770522|dbj|BAE60655.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/747 (51%), Positives = 527/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ KLIYC+RT+ E+EK LAELK L ++T+ LG A+GL+SRKNLC++
Sbjct: 61 MHYPEHR-KLIYCSRTMSEIEKALAELKALMKFRTQQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTIVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+ CPYF AR M+ F NV++YSY YLLDPK+A +S+E K+ +VVFDEAHNID
Sbjct: 180 LKYGEDHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSREFSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + ++I K++DA +L++EY++LVEGL A +
Sbjct: 240 NVCIESLSIDITENSLRKATRGANNLERKINEMKSSDAEKLQSEYSKLVEGLREAEQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFISFLKRFIEYLKTRMKVTHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 VKDLTYIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVF+RF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESEAATVPNPVLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLGFTTVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PMV+TRGSDQ +S+ F +R+DPGV RNYG +++E I PDGIV FF
Sbjct: 480 YSMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGAILMCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ ADKR+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADKRFQK--KRTQLPKWISQAMLESETNLSTDMAVATAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S ADLE+
Sbjct: 718 LRGMAQPFKAKDQDGIST-WSLADLER 743
>gi|402592700|gb|EJW86627.1| excision repair cross-complementing rodent repair deficiency
[Wuchereria bancrofti]
Length = 772
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/745 (51%), Positives = 528/745 (70%), Gaps = 7/745 (0%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ + VYFPYD IYPEQ YM ELK+ LDAKGHCLLEMP+GTGKT++LLSL+ +Y+L P
Sbjct: 16 VDGLEVYFPYDYIYPEQILYMSELKKTLDAKGHCLLEMPSGTGKTVSLLSLVIAYMLRFP 75
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
++ KL+YC+RT+ E+EK + EL+ L Y + G + A+ LS+RKNLC+N V +
Sbjct: 76 DHLDKLVYCSRTIPEIEKCVEELRNLFKYYEQCDGKPPSLFAVALSARKNLCINESVSSL 135
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
VD AC+K TAS+VRA P++ C FFE ++ P GVY LQ+LR G
Sbjct: 136 RQGSLVDGACQKLTASFVRAKRRLRPDLPCCAFFEKLDEQKDFNY-PDGVYNLQNLRKLG 194
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
+Q+G CPYFL+R++V A++VVYSY Y+LDPK+A ++SK + S VVFDEAHNIDNVCI
Sbjct: 195 QQRGICPYFLSRNVVDRAHIVVYSYHYILDPKIAELVSKNFSRHSCVVFDEAHNIDNVCI 254
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL----ALRGNLPN 300
E++SVS+ + T+E AT+ L + + ++R + ++ +LR EY+RLVEGL R N +
Sbjct: 255 ESMSVSLTKTTVEKATQKLGILEEHVQRLREENSEQLRVEYDRLVEGLRRIEEERTN--D 312
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
L+NP LP ILKEAVPG IR A HF+ LRR +YL+ R+ T+ V E P +F+ +
Sbjct: 313 QILANPVLPDMILKEAVPGTIRNALHFISFLRRFNEYLKHRMRTKTVLIESPAAFLRDVN 372
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
ID++ LRFC ER SL TLE+ D +F + I +FATLV TY RGF+++IEP D
Sbjct: 373 DLMHIDRRPLRFCAERFASLTRTLELADISDFSSLVLITNFATLVSTYARGFTVVIEPLD 432
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
E+ L LSC DAS+A++P+F R+ +VVITSGTLSP+D+YP++L+F P + S
Sbjct: 433 EKSGTGHSCTLHLSCMDASVAIRPIFQRYHTVVITSGTLSPLDMYPKILDFDPAIMASLS 492
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
M+L R CI P+++++G+DQ+ ++++F+ R D V RNYG L++E+ S+VPDG+V FF SY
Sbjct: 493 MTLARPCIAPLIVSKGNDQVAMTSRFESREDAAVIRNYGSLVLELASLVPDGVVVFFTSY 552
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +I+TW D GI+ E++++KL+FIET D +ET++AL+ Y +ACDCGRGA+FFSVARG
Sbjct: 553 LYMENVISTWYDQGIIDELLKYKLLFIETTDALETSIALEKYVEACDCGRGAIFFSVARG 612
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF H GR VIM GVP+ YT S+IL ARLEYLR+ I+E DFLTFDA+RQAAQ
Sbjct: 613 KVSEGIDFSHHLGRAVIMLGVPYVYTESRILRARLEYLREQLGIRENDFLTFDAMRQAAQ 672
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
C+GR +R K+DYG+M+FADKR+SR DK KLP WI ++ ++NLS + A+ IAR++
Sbjct: 673 CMGRALRGKSDYGLMVFADKRFSRKDKMGKLPRWIQEYITPGNVNLSIEEAVIIARKWFP 732
Query: 721 KMAQPYDKAGSIGRKTLLSQADLEK 745
MAQ + K +G L + EK
Sbjct: 733 LMAQSFTKEHQLGISLLTEEMLREK 757
>gi|238489069|ref|XP_002375772.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|220698160|gb|EED54500.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|391869618|gb|EIT78813.1| RNA polymerase II transcription initiation [Aspergillus oryzae
3.042]
Length = 794
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/747 (51%), Positives = 527/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ KLIYC+RT+ E+EK LAELK L ++T+ LG A+GL+SRKNLC++
Sbjct: 61 MHYPEHR-KLIYCSRTMSEIEKALAELKALMKFRTQQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTIVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+ CPYF AR M+ F NV++YSY YLLDPK+A +S+E K+ +VVFDEAHNID
Sbjct: 180 LKYGEDHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSREFSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + ++I K++DA +L++EY++LVEGL A +
Sbjct: 240 NVCIESLSIDITEDSLRKATRGANNLERKINEMKSSDAEKLQSEYSKLVEGLREAEQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFISFLKRFIEYLKTRMKVTHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 VKDLTYIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVF+RF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESEAATVPNPVLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLGFTTVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PMV+TRGSDQ +S+ F +R+DPGV RNYG +++E I PDGIV FF
Sbjct: 480 YSMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGAILMCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ ADKR+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADKRFQK--KRTQLPKWISQAMLESETNLSTDMAVATAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S ADLE+
Sbjct: 718 LRGMAQPFKAKDQDGIST-WSLADLER 743
>gi|380094849|emb|CCC07351.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 806
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/755 (50%), Positives = 529/755 (70%), Gaps = 10/755 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM++LK+ LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L EL+ L ++ LG + +GL+SRKNLC++
Sbjct: 61 QYYPEHR-KLIYCSRTMSEIEKALVELRALMKFRAERLGREEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + N+ETC + +N + ++P G++TL L
Sbjct: 120 VKREKSGTIVDARCRSLTAGFVKEKREKGENVETCIYHDNLDLLEQGNLIPNGIWTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+++ CPYF AR M+Q+ NV++YSY YLLDPK+A +SK++ K+ +VVFDEAHNID
Sbjct: 180 LRYGEEKKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--RGNL 298
NVCIE+LS + + +L ATR + +I K +D +L++EY +LVEGL G
Sbjct: 240 NVCIESLSTDITQDSLMRATRGAQNLEAKIAEMKDSDQEKLQSEYEKLVEGLKGLDEGRQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+A
Sbjct: 300 EDAFMANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++LNF VV S
Sbjct: 420 YESDTAKTPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLNFETVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E + PDG+V FF
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARMTPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L DA+ NLSTDMA+ AR F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFMK--KRAQLPKWINQALLDANTNLSTDMAVGNARAF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADL----EKMTND 749
L++MAQP+ G ++ DL EKM D
Sbjct: 718 LKQMAQPFSSKDQEG-VSIWGMKDLRRHQEKMAED 751
>gi|408395822|gb|EKJ74995.1| hypothetical protein FPSE_04815 [Fusarium pseudograminearum CS3096]
Length = 789
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/756 (50%), Positives = 531/756 (70%), Gaps = 13/756 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFNIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E+EK L ELK L Y+ LG + +GL+SRKNLC++
Sbjct: 61 QYMPEKR-KLIYCSRTMSEIEKALVELKSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ N++ C + +N + ++P GV++ D+
Sbjct: 120 VKREKSGAIVDARCRSLTAGFVKEKKERGENVDVCVYHDNLDLLEPHNLIPNGVWSFDDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++Q CPYF AR M+Q+ NVV++SY YLLDPK+A +SK+ K+ +VVFDEAHNID
Sbjct: 180 IRYGEEQKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L ATR + +I + + TD +L+ EY +LV+GL A
Sbjct: 240 NVCIESLSTDITEDSLRKATRGAQNLENKISQMRDTDQEQLQNEYQKLVQGLRDADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF++
Sbjct: 300 EDAFMANPALPEDLLKEAVPGNIRRAEHFIAFLKRFIEYLKTRMKVRQVISETPPSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ H I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LREHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++L+F V+ S
Sbjct: 420 FESDTAEVPNPVLHFTCLDAAIAIKPVFDRFYSVIITSGTISPLEIYPKMLDFQTVIQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ VST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 480 YAMTLARRSFMPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W G+L E+ ++KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGVLDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARL++LR+T++IKE DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLQFLRETYRIKENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L+++ +NLSTDMA+ AR F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQK--KRTQLPKWINQGLQESDVNLSTDMAVSSARRF 717
Query: 719 LRKMAQPY---DKAG--SIGRKTLL---SQADLEKM 746
LR MAQP+ D+ G + G K L+ + DLE++
Sbjct: 718 LRTMAQPFRAKDQEGISTWGYKDLMEHKEKMDLERI 753
>gi|353227556|emb|CCA78059.1| probable RAD3-DNA helicase/ATPase [Piriformospora indica DSM 11827]
Length = 798
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/733 (51%), Positives = 528/733 (72%), Gaps = 12/733 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F+++++ V FPYD IYPEQY YM +LKR LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFEIDNLPVVFPYDKIYPEQYKYMCDLKRTLDASGHCVLEMPSGTGKTVSLLSLIVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK------ILAIGLSSRKN 114
P KLIYC+RTV E+EK L ELK L Y+ + +GL+SR+N
Sbjct: 61 QFFPTK-RKLIYCSRTVPEIEKALTELKRLMKYRIESAETDEQREKERAFTGLGLTSRRN 119
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPG 173
LC++ +V + VDA CR T++ NP ++ C++ E +++PPG
Sbjct: 120 LCLHPQVSTEKKGHVVDAKCRDLTSAAACEKGRANPGSVPLCDWHEGLNDMEPGSLVPPG 179
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
+ TL DL G++ CPYF R M+ F +V++YS+ YLLDPKVA +SK++ K+++VVF
Sbjct: 180 ILTLADLMERGRRTTTCPYFTIRRMMPFVDVIIYSFHYLLDPKVAEQVSKDLSKDAIVVF 239
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL- 292
DEAHNIDNVCIE+LS+ + R L+ A R+++++ +++E K TDA +L+ EY +LV+GL
Sbjct: 240 DEAHNIDNVCIESLSIDLTRPMLDSAVRSVTKLGEKVEEIKLTDASKLQDEYAKLVQGLQ 299
Query: 293 -ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
A + + +SNP LP D+LKEA+PGNIR+AEHF+ L+R V+YL+ R+ +V E
Sbjct: 300 DADADDNEDPIVSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAET 359
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
P SF+ + I+++ LRFC ERL SL+ TLE+T DE+ +Q + FATLV TY +G
Sbjct: 360 PASFLQHLKDITYIEKRPLRFCAERLQSLIRTLELTGLDEYYSLQKVASFATLVATYEKG 419
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
F +I+EPF+ +P+P+ L C D S A+KP+F+RF SVVITSGT+SP+D+YP++L F
Sbjct: 420 FLLILEPFETDNATVPNPIFHLICLDPSFAIKPIFERFSSVVITSGTISPLDMYPKMLQF 479
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
PVV ++ M+LTR+C P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVPD
Sbjct: 480 TPVVQETYPMTLTRNCFLPLVITRGSDQVAISSQFEVRNDPAVVRNFGSILIEYSKIVPD 539
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
G+V FF SY YM+ I+A WND GIL+++ +HKL+F+ET D ET++AL+NYR+AC+ GRG
Sbjct: 540 GVVAFFPSYLYMESIVAAWNDMGILEDVWKHKLIFVETPDANETSIALENYRRACNNGRG 599
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AV SVARGKV+EGIDFD +YGR VIM VP+QYT S+IL ARLEYLRDT++I+E +FL
Sbjct: 600 AVLLSVARGKVSEGIDFDHNYGRAVIM--VPYQYTESRILRARLEYLRDTYRIRESEFLG 657
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDA+R AAQCVGRV+R K D+G+M+FAD+R++R DKRSKLP WI ++ + NLSTDMA
Sbjct: 658 FDAMRNAAQCVGRVLRGKTDWGLMVFADRRFARSDKRSKLPKWINQYITENASNLSTDMA 717
Query: 712 LHIAREFLRKMAQ 724
+ +++ F+R ++Q
Sbjct: 718 IVLSKSFMRTISQ 730
>gi|452820568|gb|EME27609.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 751
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/738 (51%), Positives = 528/738 (71%), Gaps = 8/738 (1%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELK+ LDA GHC+LEMPTGTGKT+ LLS +Y ++ + KLIYCTRTV E++K L
Sbjct: 1 MKELKKTLDAGGHCILEMPTGTGKTVTLLSFFVAYRAARA-SIGKLIYCTRTVGEIDKVL 59
Query: 85 AELKLLHNYQ---TRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
EL+ + Y+ + +++A+GL++R+NLC+ V +E R+ D+ CR TASW
Sbjct: 60 EELERVLAYRRDCNVDVASENQLVAVGLTTRRNLCLLPAVKDSETREEADSKCRSLTASW 119
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
VR + C ++EN ++ +PPGVY++ L AFG++QG CPYF AR +Q+
Sbjct: 120 VREGITSRSSDSLCPYYENLQQKGELFQIPPGVYSMSSLNAFGEEQGICPYFTARRSLQY 179
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
A+++VY+Y YLLDPK++ +IS E++++ VVVFDEAHNID+VCIE +SV +++ T++ +
Sbjct: 180 ASIIVYNYHYLLDPKISRMISTELERDCVVVFDEAHNIDDVCIETMSVHLKKDTIQRCYQ 239
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRGNLPNAWLSNPALPSDILKEAVPGN 320
NL+ ++ ++ K +A +L EY R++ G L + +A L+ P LP L+E +PGN
Sbjct: 240 NLNHLSGLVQDAKQRNAQQLLEEYQRVLRGTPFLATSETDALLAAPVLPDSALQETIPGN 299
Query: 321 IRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSL 380
IR+AEHFL LRR+++Y++ ++ +E +F+ S+ + D K L+F +RL SL
Sbjct: 300 IRKAEHFLRFLRRILEYVQNVMQRNVATQEKTGAFLQSMASLLQSDFKALKFSSDRLQSL 359
Query: 381 MLTLEITDTDEFLHIQTICDFATLVGTYTRG--FSIIIEPFDERMPHIPDPVLQLSCHDA 438
+ TL+IT EF IQT+ DF T++G+Y G F +I EP+DER P IPDP+LQL+C DA
Sbjct: 360 IQTLQITHLLEFQPIQTLADFVTILGSYPTGNAFVVIFEPYDERYPSIPDPLLQLACLDA 419
Query: 439 SLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
SLA++PVF RF+SV++TSGT+SPI+LY R+L F PV ++S MS R +CPM++TRG+D
Sbjct: 420 SLAMQPVFSRFRSVILTSGTISPIELYSRILMFTPVTAKSLTMSFQRRNVCPMIVTRGAD 479
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
QLPVS+K+D R DP V RNYG L++EM IVPDGIVCFF SY YM+ +I W++ GI+K+
Sbjct: 480 QLPVSSKYDYRHDPSVVRNYGTLVMEMARIVPDGIVCFFTSYIYMETMIQLWHEMGIIKK 539
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
I ++KL+FIET D +E TLAL NYRKACDCGRGA+F VARGKVAEGIDFDRHYGR VI+
Sbjct: 540 ISEYKLIFIETPDNLECTLALKNYRKACDCGRGALFMCVARGKVAEGIDFDRHYGRCVIV 599
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
GVPFQYT S++L ARLE+LR QI EGDFL+FDA+RQAAQC+GRVIRSK DYG+M+FA
Sbjct: 600 LGVPFQYTESRVLRARLEFLRTNLQISEGDFLSFDAVRQAAQCIGRVIRSKTDYGIMVFA 659
Query: 679 DKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLL 738
DKR++R DK++KLP W+L L DAH +LS DMA+ IA FL+++AQP+ G +
Sbjct: 660 DKRFNRPDKKNKLPKWVLQFLDDAHCDLSVDMAISIASAFLKQIAQPFHADAGTGIALIS 719
Query: 739 SQADLEKM-TNDGSINEM 755
+ LE M TND + M
Sbjct: 720 EEQLLELMETNDKKWDSM 737
>gi|325090321|gb|EGC43631.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H88]
Length = 797
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/746 (50%), Positives = 524/746 (70%), Gaps = 6/746 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+PE KLIYC+RT+ E+EK LAELK L Y+ + LG A +GL+SRKNLC++
Sbjct: 61 QHQPEQR-KLIYCSRTMSEIEKALAELKALMKYRAQQLGFAEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + ++E C + EN + + ++PPGV+TL D+
Sbjct: 120 VKREKSGAVVDARCRSLTAGFVKEKKEKGEDVELCIYHENLDLLEPSNLVPPGVFTLDDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF R M+ F V++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNID
Sbjct: 180 TKYGEQHKQCPYFSVRRMMPFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A+R + + ++IE K +DA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKASRGANNLERKIEEMKRSDAEKLQNEYQKLVEGLREADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF+A
Sbjct: 300 EEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELVNLEDYQPLQQVAAFATLAATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV++TSGTLSP+++YP++L F V+ S
Sbjct: 420 FESETATVPNPILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKMLKFTTVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PMV+TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDG+V FF
Sbjct: 480 YTMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDLVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRVIR K DYG+M+ AD+R+ + +R++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVIRGKDDYGVMVLADRRFQK--RRTQLPKWISQAMLESETNLSTDMAVATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
L+ MAQP+ G T S DLE
Sbjct: 718 LKTMAQPFKSKDQEGIST-WSLTDLE 742
>gi|440635897|gb|ELR05816.1| DNA repair helicase rad15 [Geomyces destructans 20631-21]
Length = 795
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/747 (51%), Positives = 526/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFNIDDLPVLFPYPRIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L NY+T LG + +GL+SRKNLC++
Sbjct: 61 QYYPEHR-KLIYCSRTMSEIEKALAELKALMNYRTEQLGRVEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++P GV+TL +
Sbjct: 120 VKREKSGAIVDARCRSLTAGFVKDKKENGEDVELCTYHENLDLLEPHDLIPNGVWTLDGI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF +R M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 MRYGEEHKQCPYFTSRRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L ATR + +I K TDA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSTDITEDSLRKATRGAQNLETKICEIKDTDAEKLQNEYAKLVEGLREADEARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNPALP D+LKEAVPGNIRRAEHF+ L+R V+YL+ R+ V E P+SF+A
Sbjct: 300 EDTFMSNPALPDDLLKEAVPGNIRRAEHFVAFLKRFVEYLKTRMRVRQVISETPLSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKETTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQQVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+PVL +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++LNF VV +
Sbjct: 420 YESDTAEVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLNFTTVVQET 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
++M+L R PM++TRGSDQ+ +S+ F +R++P V RNYG LL E I PDG+V FF
Sbjct: 480 YQMTLARRSFLPMIVTRGSDQVAISSGFQVRNEPSVVRNYGNLLTEFSKITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + + D+ NLS DMA+ A++F
Sbjct: 660 SQCLGRVLRGKDDYGIMVLADRRFMK--KRAQLPSWINNAVMDSDTNLSIDMAVSSAKKF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
L+ +AQP+ + G T S DL K
Sbjct: 718 LKNIAQPFKQEDHEGIST-WSVTDLRK 743
>gi|358370846|dbj|GAA87456.1| DNA repair helicase RAD3 [Aspergillus kawachii IFO 4308]
Length = 801
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/756 (50%), Positives = 528/756 (69%), Gaps = 6/756 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L ++ + LG A+GL+SRKNLC++
Sbjct: 61 QHYPEH-RKLIYCSRTMSEIEKALAELKALMKFRAKELGHTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL DL
Sbjct: 120 VKREKSGAVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDDL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEEHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + ++I K +DA +L+ EY++LVEGL A +
Sbjct: 240 NVCIESLSIDITEDSLRKATRGANNLERKINEMKTSDAEKLQNEYSKLVEGLQAAEQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVMHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 VKDLTYIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F+ V+ S
Sbjct: 420 FESEAATVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFNAVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PMV+TRGSDQ +S+ F +R+DPGV RNYG L++E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGALLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWINQAMLESETNLSTDMAAATAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINE 754
LR MAQP+ G T S AD+E+ + E
Sbjct: 718 LRTMAQPFKARDQEGIST-WSLADIERHREKQKLEE 752
>gi|119495148|ref|XP_001264365.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
gi|119412527|gb|EAW22468.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/747 (50%), Positives = 528/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFMIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L ++T+ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALAELKELMKFRTQQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ + NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LKYGEEHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIEALS+ + +L ATR + + ++I K++DA +L+ EY++LVEGL A +
Sbjct: 240 NVCIEALSIDITEDSLRKATRGANNLERKISEMKSSDAEKLQNEYSKLVEGLREAEQARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +++NP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFIANPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 VKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLVSTYDKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESETATVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFPTVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +++E I PDGIV FF
Sbjct: 480 YTMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ F VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDSQESSLALETYRTACCNGRGAILFCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQK--KRNQLPKWISQAMLESETNLSTDMAVATAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S AD+E+
Sbjct: 718 LRTMAQPFKAKDQEGIST-WSLADIER 743
>gi|425770095|gb|EKV08569.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum Pd1]
gi|425771642|gb|EKV10079.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum PHI26]
Length = 794
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/747 (50%), Positives = 525/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L ++ + LG + A+GL+SRKNLC++
Sbjct: 61 QHYPEH-RKLIYCSRTMSEIEKALAELKALMEHRAKELGHEEEFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ + N+++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 ARYGEEHKQCPYFSARRMMPWCNIIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + + IE K+TD +L+ EY++LVEGL A +
Sbjct: 240 NVCIESLSIDLSEDSLRKATRGANNLERRIEEMKSTDEEKLKNEYSKLVEGLQEAEKARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVTHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKDLTYIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLVATYDKGFVLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESEAATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFTAVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ VS+ F +R+DPGV RNYG L+ E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQVSSSFGIRNDPGVVRNYGSLVTEFARITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL +I +KL+ +ET D E++LAL+ YR AC GRGA+ F VA
Sbjct: 540 SYLYMESIISMWQGMGILDQIWNYKLILVETPDAQESSLALETYRTACCNGRGAILFCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAIRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ R KR +LP WI + D+ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFER--KRPQLPKWINQAMLDSETNLSTDMAVSNAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T AD+E+
Sbjct: 718 LRTMAQPFKSKDQEGIST-WGLADIER 743
>gi|225560307|gb|EEH08589.1| DNA repair helicase RAD3 [Ajellomyces capsulatus G186AR]
Length = 797
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/746 (50%), Positives = 523/746 (70%), Gaps = 6/746 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+PE KLIYC+RT+ E+EK LAELK L Y+ + LG +GL+SRKNLC++
Sbjct: 61 QHQPEQR-KLIYCSRTMSEIEKALAELKALMKYRAQQLGFVEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + ++E C + EN + + ++PPGV+TL D+
Sbjct: 120 VKREKSGAVVDARCRSLTAGFVKEKKEKGGDVELCIYHENLDLLEPSNLVPPGVFTLDDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF R M+ F V++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNID
Sbjct: 180 TKYGEQHKQCPYFSVRRMMPFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A+R + + ++IE K +DA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKASRGANNLERKIEEMKRSDAEKLQNEYQKLVEGLREADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF+A
Sbjct: 300 EEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 360 LKDLTSIERKPLRFCAERLTSLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV++TSGTLSP+++YP++L F V+ S
Sbjct: 420 FESETATVPNPILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKMLKFTTVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PMV+TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDG+V FF
Sbjct: 480 YTMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDLVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRVIR K DYG+M+ AD+R+ + +R++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVIRGKDDYGVMVLADRRFQK--RRTQLPKWISQAMLESETNLSTDMAVATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
L+ MAQP+ G T S DLE
Sbjct: 718 LKTMAQPFKSKDQEGIST-WSLTDLE 742
>gi|428170235|gb|EKX39162.1| ERCC2/XPD/Rad3 nucleotide excision repair [Guillardia theta
CCMP2712]
Length = 703
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/733 (52%), Positives = 527/733 (71%), Gaps = 45/733 (6%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLI 71
PY + PE+ M KR D GTGKTI LLSLITSY L+ PE P KL+
Sbjct: 1 MPYMGLLPEKLPSMTS-KRDAD-----------GTGKTITLLSLITSYQLAHPEVP-KLV 47
Query: 72 YCTRTVHEMEKTLAELKLLHNYQTRHLGP-AAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
YCTRTV EMEK L EL+ L Y+T LG KILA+GLSSR+N+C++ + +R +V
Sbjct: 48 YCTRTVPEMEKALEELRELIKYRTSILGAEGGKILALGLSSRRNMCIHPEISQESDRIAV 107
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWC 190
DA CR TASWVR ++ NI C FFE ++K S ++L PGVYTL DLR GK++GWC
Sbjct: 108 DAQCRSITASWVRQRKEQDNNINVCSFFEGFDKHGSQSLLQPGVYTLDDLRNMGKEKGWC 167
Query: 191 PYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVS 250
PYF ARHM+++ANV+VY+Y Y++DPK++ ++S++++KES++VFDEAHNIDNVCIEALSV+
Sbjct: 168 PYFTARHMIRYANVIVYNYAYVIDPKISLLVSRDVEKESILVFDEAHNIDNVCIEALSVN 227
Query: 251 VRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSN----- 305
+ ++ L+GA+RN++ +++ IE+ K +A +LR EY RLV GL G + A LS+
Sbjct: 228 INKKNLDGASRNIATLSRAIEKSKEQNAEQLRQEYERLVAGLQGSGAITGAPLSDQFGGD 287
Query: 306 PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN-VEKEGPVSFVASITAHAG 364
P ++ L++ +PG+I +A +F+ +R++V +L+ RL N VE V FV S+
Sbjct: 288 PVGFANELEQLIPGDIIQAHNFISFMRKVVDFLKERLRVSNTVEMTDNVPFVRSLMQKMQ 347
Query: 365 IDQ-KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERM 423
+ + K+LRF +RL SL+ TLE+ D D + + + DF LV TYT+GF IIIEPFDER+
Sbjct: 348 LQEPKSLRFSAQRLKSLLHTLEVVDVDTYTPLSLVADFCALVSTYTQGFKIIIEPFDERL 407
Query: 424 PHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL 483
P++PDP+L L+C DASLA+KPVF+ FQSVVITSGTLSPIDLYP++LNF P+ +++F+MSL
Sbjct: 408 PNVPDPILHLACLDASLAIKPVFEHFQSVVITSGTLSPIDLYPKILNFVPL-TKTFEMSL 466
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
+R CICPM++TRGSDQ+P++ ++ RSD + NYG+L+VE+ S VPDG+V FF SY YM
Sbjct: 467 SRQCICPMIVTRGSDQMPLNARYQSRSDRSIIHNYGRLIVELSSCVPDGMVVFFPSYRYM 526
Query: 544 DEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVA 603
+E++ W + +L++I +KL+FIETQDVVETTLAL+N+++ACDCGRGAVFFSVARGKVA
Sbjct: 527 EEVVGAWANGKVLEQITTYKLLFIETQDVVETTLALENFKRACDCGRGAVFFSVARGKVA 586
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVG 663
EGIDFD+HYGR VI+ G+PFQYTLSKIL ARL+Y+++ +QI EGDFLTFDA+RQ
Sbjct: 587 EGIDFDKHYGRAVIIIGIPFQYTLSKILRARLDYMKERYQIDEGDFLTFDAMRQ------ 640
Query: 664 RVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMA 723
RY+R+DK+SKLP WI + D H+NLSTDMA++ A+EFL KMA
Sbjct: 641 -----------------RYARNDKKSKLPSWIRQYTHDTHVNLSTDMAVNAAKEFLAKMA 683
Query: 724 QPYDKAGSIGRKT 736
P + K+
Sbjct: 684 VPQSIESQVREKS 696
>gi|50556538|ref|XP_505677.1| YALI0F20746p [Yarrowia lipolytica]
gi|49651547|emb|CAG78486.1| YALI0F20746p [Yarrowia lipolytica CLIB122]
Length = 785
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/735 (50%), Positives = 519/735 (70%), Gaps = 5/735 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V +PY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLWPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ K+IYC+RT+ E+EK LAELK L ++T LG +GL+SRKNLC+N
Sbjct: 61 QHYPEHR-KIIYCSRTMSEIEKALAELKNLMKFRTETLGFEEDFRGLGLTSRKNLCLNPN 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD CR T+ + A ++ CE+ EN +PPGV+T +D+
Sbjct: 120 VRYEKKGYIVDEKCRAMTSGIAKQKLAAGEDVTLCEYHENMNDIEPHNYIPPGVFTFEDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
A+G++ CPYF R M+ F NV++YSY YLLDPK+A +SKE+ K+ +V+FDEAHNID
Sbjct: 180 LAYGEEHKTCPYFTVRRMMAFCNVIIYSYHYLLDPKIADRVSKELSKDCIVIFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIEALSV + +L+ ATR + + +++ +++D+ +L+ EYN+LV+GL G
Sbjct: 240 NVCIEALSVDITEDSLKRATRGANHLAKKVSEARSSDSEKLKNEYNKLVDGLRDLESGEQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +L+NP LP D++ EAVPGNIR+AEHF+ L+R ++YL+ R++ +V E P SF+
Sbjct: 300 EDTFLANPVLPEDLISEAVPGNIRKAEHFVAFLKRFIEYLKSRMKVLHVISETPASFLKH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL L+ TLE+T D++ ++ I FATLV TY GF +I+EP
Sbjct: 360 LRDLTYIERKPLRFCAERLSYLVRTLELTHVDDYTALKEIAVFATLVSTYDTGFQLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L L+C DAS+A+KPVFDRF S++ITSGT+SP+D+YP++LNF VV S
Sbjct: 420 FETDQATVPNPILHLTCLDASIAIKPVFDRFSSIIITSGTISPLDMYPKMLNFETVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R CP+++T+GSDQ+ +S++F++R+DP V RNYG LL+E I PDG+V FF
Sbjct: 480 YTMTLARRAFCPLIVTKGSDQVAISSRFEIRNDPSVVRNYGNLLIEFSKITPDGLVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETSLALETYRTACSNGRGAVMLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD +GR V+M GVPFQYT S+IL ARLE+LRD + I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQFGRTVLMIGVPFQYTESRILKARLEFLRDNYHIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+++ KR++LP WI + DA NLSTDMAL A++F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFAK--KRNQLPKWINQAILDADTNLSTDMALAAAKKF 717
Query: 719 LRKMAQPYDKAGSIG 733
LR MAQP +K G
Sbjct: 718 LRTMAQPMNKEDQEG 732
>gi|366997945|ref|XP_003683709.1| hypothetical protein TPHA_0A01920 [Tetrapisispora phaffii CBS 4417]
gi|357522004|emb|CCE61275.1| hypothetical protein TPHA_0A01920 [Tetrapisispora phaffii CBS 4417]
Length = 773
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/730 (51%), Positives = 522/730 (71%), Gaps = 8/730 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++KR LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYHYMCDIKRTLDAGGNSILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+T+ LG + +GLSSRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRTKELGFKEEFRGLGLSSRKNLCLHPV 119
Query: 121 VLAAENRDSVDAACRKRTASWV-RALAAE-NPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T RA+ A+ N N E C++ EN K LP GV++ +
Sbjct: 120 VNKERKGTVVDEKCRRMTNGQAKRAIEADPNANAELCDYHENLYKLEVDDYLPNGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + + CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLIKYCNDKTLCPYFIVRRMISMCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L+ AT+ + + +IE K D+ +L+ EY++LV+GL L N
Sbjct: 240 IDNVCIESLSLDLTNDILKKATKGANTLANKIEDVKKVDSKKLQDEYDKLVQGLHLSENE 299
Query: 299 ---PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
++ NP L DILKEA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 NEDDEPFVENPVLSEDILKEAIPGNIRRAEHFISFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+TD ++F ++ I FATLV TY GF +I
Sbjct: 360 LQHLKQLTFIDKKPLRFCAERLSLLVRTLEVTDVEDFAALKDIATFATLVSTYEDGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEPF+ +P+P+L+ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPFELENAAVPNPILRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFTTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+LT+ PM++T+GSDQ+ +S++F++R+DP + RNYG +L+E I PDG+V
Sbjct: 480 QKSYTMTLTKKTFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLIEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+ F
Sbjct: 540 FFPSYLYMESIISMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILF 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR +R++LP WI L DA+LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--RRNQLPKWIAQGLSDANLNLSTDMAVSNT 717
Query: 716 REFLRKMAQP 725
++FLR MAQP
Sbjct: 718 KKFLRTMAQP 727
>gi|259488995|tpe|CBF88902.1| TPA: 5' to 3' DNA helicase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 791
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/747 (51%), Positives = 526/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAEL+ L +++ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALAELRELMKFRSEQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKEKGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ + NV++YSY YLLDPK+A +SKE K+ +VVFDEAHNID
Sbjct: 180 LNYGEQHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSKEFSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + ++I+ K++DA +L EY +LVEGL A +
Sbjct: 240 NVCIESLSIDITEDSLRKATRGANNLERKIQDVKSSDAEKLNNEYMKLVEGLREAEQARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLNH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 VKELTFIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVFDRF SVVITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESEAATVPNPVLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLGFTTVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +++E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ F VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGALLFCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQK--KRNQLPKWISQALLESETNLSTDMAVATAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S ADLE+
Sbjct: 718 LRTMAQPFKAKDQEGIST-WSLADLER 743
>gi|336468265|gb|EGO56428.1| hypothetical protein NEUTE1DRAFT_130389 [Neurospora tetrasperma
FGSC 2508]
gi|350289484|gb|EGZ70709.1| putative excision repair protein rhp3 [Neurospora tetrasperma FGSC
2509]
Length = 806
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/755 (50%), Positives = 528/755 (69%), Gaps = 10/755 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM++LK+ LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L EL+ L ++ LG + +GL+SRKNLC++
Sbjct: 61 QYYPEHR-KLIYCSRTMSEIEKALVELRALMKFRAERLGHEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + N+ETC + +N + ++P G++TL L
Sbjct: 120 VKREKSGAIVDARCRSLTAGFVKEKREKGENVETCVYHDNLDLLEPHNLIPNGIWTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+++ CPYF AR M+Q+ NV++YSY YLLDPK+A +SK++ K+ +VVFDEAHNID
Sbjct: 180 MRYGEEKKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--RGNL 298
NVCIE+LS + + +L ATR + +I K +D +L++EY +LVEGL G
Sbjct: 240 NVCIESLSTDITQDSLMRATRGAQNLEAKISEMKDSDQEKLQSEYEKLVEGLKGLDEGRQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+A
Sbjct: 300 EDAFMANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++LNF VV S
Sbjct: 420 YESDTAKTPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLNFETVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI +A+ NLSTDMA+ AR F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFMK--KRAQLPKWINQAFLEANTNLSTDMAVGNARAF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADL----EKMTND 749
L++MAQP+ G ++ DL EKM D
Sbjct: 718 LKQMAQPFSAKDQEG-VSIWGMEDLKRHQEKMAED 751
>gi|255941534|ref|XP_002561536.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586159|emb|CAP93907.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 795
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/747 (50%), Positives = 524/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L ++ + LG + A+GL+SRKNLC++
Sbjct: 61 QHYPEH-RKLIYCSRTMSEIEKALAELKALMEHRAKELGHEEEFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ + N+++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 SRYGEEHKQCPYFSARRMMPWCNIIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + + IE K+TD +L+ EY++LVEGL A +
Sbjct: 240 NVCIESLSIDLSEDSLRKATRGANNLERRIEDMKSTDEEKLKNEYSKLVEGLQEAEKARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFISFLKRFIEYLKTRMKVTHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKDLTYIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLVATYDKGFVLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESEAATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFTAVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ VS+ F +R+DPGV RNYG L+ E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQVSSSFGIRNDPGVVRNYGSLVTEFARITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL +I +KL+ +ET D E++LAL+ YR AC GRGA+ F VA
Sbjct: 540 SYLYMESIISMWQGMGILDQIWNYKLILVETPDAQESSLALETYRTACCNGRGAILFCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAIRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ R KR +LP WI + D+ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFER--KRPQLPKWINQAMLDSETNLSTDMAVSNAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T AD+E+
Sbjct: 718 LRTMAQPFKSKDQEGIST-WGLADIER 743
>gi|367055120|ref|XP_003657938.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL 8126]
gi|347005204|gb|AEO71602.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL 8126]
Length = 800
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/747 (50%), Positives = 523/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM++LK+ LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P + KLIYC+RT+ E+EK L ELK L ++ + LG + +GL+SRKNLC++
Sbjct: 61 QYYPSHR-KLIYCSRTMSEIEKALVELKALMKFRAQRLGHEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ + VDA CR TA +V+ + ++E C + +N + ++P G++TL L
Sbjct: 120 VKREKSGNVVDARCRSLTAGFVKEKKNKGEDVEVCVYHDNLDLLEPHNLIPNGIWTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+Q+ NV++YSY YLLDPK+A +SK++ K+ +VVFDEAHNID
Sbjct: 180 LRYGEQHKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L ATR + I + +D +L+ EY +LVEGL A G
Sbjct: 240 NVCIESLSTDITEDSLRRATRGAQNLENRINEMRESDQQKLQDEYEKLVEGLRGADDGRQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+++++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+A
Sbjct: 300 EDSFMANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++LNF VV S
Sbjct: 420 YESDTAEVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLNFPTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCVGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L DA NLSTDMA+ AR F
Sbjct: 660 AQCLGRVLRGKDDYGLMVLADRRFQK--KRAQLPKWINQALLDADTNLSTDMAVSSARRF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
L+ MAQP+ G T S ADL +
Sbjct: 718 LKTMAQPFRAKDQEGIST-WSLADLRR 743
>gi|344228422|gb|EGV60308.1| DNA helicase component of transcription factor b [Candida tenuis
ATCC 10573]
Length = 797
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/746 (50%), Positives = 522/746 (69%), Gaps = 16/746 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KVVYCSRTMSEIEKALIELYNLMEYRANELGFVEDFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAE----------NPNIET-CEFFENYEKAASAAV 169
+ VD CR+ T ++ E NP + + C+F EN +
Sbjct: 120 ISKERKGAVVDEKCRRITNGQLKHRIEEGAIDEEAQRSNPEVNSLCKFHENLYDYEQHDL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+PPGVY+ + L FG+++ CPYF R M+ F N+++YSY YLLDPK+A +SKE+ K+S
Sbjct: 180 IPPGVYSFESLMDFGREKSTCPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + TL+ ATR ++++ IE KA D+ +L+ EY +LV
Sbjct: 240 IIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGANKLSDAIEDMKAQDSEKLQNEYEKLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A +++NP LP D+L EA+PGNIR+ EHF+ L+R ++YL+ R++ +V
Sbjct: 300 EGLRQAEIARDEELFMANPTLPQDLLDEAIPGNIRKGEHFVSFLKRFIEYLKTRMKVLHV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P SF+ + ID+K LRFC ERL L+ TLE+ D ++F ++ I FATLV T
Sbjct: 360 ISETPNSFLQHLKELTFIDRKPLRFCSERLSLLVRTLELNDIEDFTALKDIATFATLVST 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y +GF +I+EPF+ +P+P+L+ +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YP+
Sbjct: 420 YDKGFQLILEPFETEGATVPNPILRFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPK 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+LNF V+ RS+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 480 MLNFETVIQRSYTMTLDRRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFSK 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W G+L E+ ++KL+ +ET D ET+LALD YRKAC+
Sbjct: 540 ITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKYKLILVETPDAQETSLALDTYRKACN 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ QI+E
Sbjct: 600 SGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENNQIREN 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R++R KRS+LP WI L D+ LNLS
Sbjct: 660 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFAR--KRSQLPKWIAQALNDSDLNLS 717
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIG 733
TDMAL A++FLR +AQP + G
Sbjct: 718 TDMALANAKKFLRTLAQPTNPKDQEG 743
>gi|16416010|emb|CAB91361.2| probable excision repair protein rhp3 [Neurospora crassa]
Length = 806
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/755 (50%), Positives = 527/755 (69%), Gaps = 10/755 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM++LK+ LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFNIDDLPVLFPYPRIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L EL+ L ++ LG + +GL+SRKNLC++
Sbjct: 61 QYYPEHR-KLIYCSRTMSEIEKALVELRALMKFRAERLGHEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + N+ETC + +N + ++P G++TL L
Sbjct: 120 VKREKSGAIVDARCRSLTAGFVKEKREKGENVETCVYHDNLDLLEPHNLIPNGIWTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+++ CPYF AR M+Q NV++YSY YLLDPK+A +SK++ K+ +VVFDEAHNID
Sbjct: 180 MRYGEEKKQCPYFTARRMMQHCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--RGNL 298
NVCIE+LS + + +L ATR + +I K +D +L++EY +LVEGL G
Sbjct: 240 NVCIESLSTDITQDSLMRATRGAQNLEAKISEMKDSDQEKLQSEYEKLVEGLKGLDEGRQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+A
Sbjct: 300 EDAFMANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++LNF VV S
Sbjct: 420 YESDTAKTPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLNFETVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI +A+ NLSTDMA+ AR F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFMK--KRAQLPKWINQAFLEANTNLSTDMAVGNARAF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADL----EKMTND 749
L++MAQP+ G ++ DL EKM D
Sbjct: 718 LKQMAQPFSAKDQEG-VSIWGMEDLKRHQEKMAED 751
>gi|378732396|gb|EHY58855.1| DNA repair helicase rad15 [Exophiala dermatitidis NIH/UT8656]
Length = 819
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/727 (51%), Positives = 516/727 (70%), Gaps = 5/727 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y++ LG +GL+SRKNLC++
Sbjct: 61 QHYPEH-RKLIYCSRTMSEIEKALAELKALMKYRSDQLGYVEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + +N + ++PPGV+TL L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFVKEKKERGEDVEVCVYHDNLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 IRYGEEHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + ++IE KA+D +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKATRGANNLERKIEEMKASDEEKLQNEYQKLVEGLREADEARA 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ V +E P SF++
Sbjct: 300 EDAFMSNPTLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLYVIQETPPSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY GF +I+EP
Sbjct: 360 LKELTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DAS+A+KPVF+RF SV+ITSGT+SP+++YP++LNF V+ S
Sbjct: 420 FETEQATVPNPILHFACLDASIAIKPVFERFSSVIITSGTISPLEMYPKMLNFSTVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ MSL R PM++TRGSDQ +++ F RSDPGV RNYG LL E I PDGIV FF
Sbjct: 480 YPMSLARRSFLPMIVTRGSDQQSITSGFQSRSDPGVVRNYGALLFEFAKITPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL +I +KL+ +ET D ET+LAL+ YR AC+ G+GA+ VA
Sbjct: 540 SYLYMEMIISMWQGMGILDQIWTYKLILVETPDAQETSLALETYRTACENGKGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD H+GR V+ G PFQYT S+IL ARLE+LR+ ++IKE DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHFGRTVLCMGAPFQYTESRILKARLEFLRENYRIKEQDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + D LSTD A+ +A++F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQK--KRNQLPRWIAEEIHDGQTGLSTDAAVGMAKKF 717
Query: 719 LRKMAQP 725
LR +AQP
Sbjct: 718 LRSIAQP 724
>gi|407928326|gb|EKG21185.1| Xeroderma pigmentosum group D protein [Macrophomina phaseolina MS6]
Length = 788
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/728 (51%), Positives = 514/728 (70%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY IYPEQY YM +LKR LDA G+C+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFNIDELPVLFPYPRIYPEQYKYMCDLKRTLDAGGNCILEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+PE KLIYC+RT+ E+EK L ELK L Y+T LG +GL+SRKNLC++
Sbjct: 61 QHQPEKR-KLIYCSRTMSEIEKALHELKALMKYRTEQLGYEEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +N VDA CR TA +V+ +++ C + +N + ++PPGV+T D+
Sbjct: 120 VKREKNGAVVDARCRSLTAGFVKEKKERGEDVDLCIYHDNLDLLEPHNLIPPGVFTFDDI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+ CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEDHKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + ++I KATDA +L EY +LVEGL A +
Sbjct: 240 NVCIESLSIDLTEDSLRKATRGAHNLERKITEMKATDAEKLSNEYKKLVEGLREADQARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A++SNPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ +V E P SF+
Sbjct: 300 EDAFMSNPALPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVVAETPPSFLNH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY GF +I+EP
Sbjct: 360 LKELTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+P+ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YP++LNF VV S
Sbjct: 420 YEAEGATVPNPIFHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLNFSTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DP V +NYG LL E + PDGIV FF
Sbjct: 480 YTMTLARKSFLPMIVTRGSDQAAISSSFGVRNDPNVVKNYGVLLREFCKLTPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +I+ W GIL ++ ++KL+ +ET D ET+LAL+ YR AC+ GRGAV VA
Sbjct: 540 SYLYMESVISQWQGMGILDDVWRYKLILVETPDAQETSLALETYRTACNNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+T+ I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRETYHIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ ADKR+ +KR++LP WI HL DA N+S D A +A++F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADKRF--RNKRTQLPKWIAQHLSDADANMSIDQAAAMAKKF 717
Query: 719 LRKMAQPY 726
LR M++ Y
Sbjct: 718 LRDMSKSY 725
>gi|170591680|ref|XP_001900598.1| probable DNA helicase ERCC2/XPD - southern platyfish [Brugia
malayi]
gi|158592210|gb|EDP30812.1| probable DNA helicase ERCC2/XPD - southern platyfish, putative
[Brugia malayi]
Length = 763
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/745 (51%), Positives = 523/745 (70%), Gaps = 14/745 (1%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLI 71
FPYD IYPEQ YM ELK+ LDAKGHCLLEMP+GTGKT++LLSL+ +Y+L P++ KL+
Sbjct: 7 FPYDYIYPEQILYMSELKKTLDAKGHCLLEMPSGTGKTVSLLSLVIAYMLRFPDHLDKLV 66
Query: 72 YCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVD 131
YC+RT+ E+EK + EL+ L Y + G + A+ LS+RKNLC+N V + VD
Sbjct: 67 YCSRTIPEIEKCVEELRNLFKYYEQCDGKPPSLFAVALSARKNLCINESVSSLRQGSLVD 126
Query: 132 AACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCP 191
AC+K TAS+VRA P++ C FFE ++ P GVY LQ+LR G+Q+G CP
Sbjct: 127 GACQKLTASFVRAKRRLRPDLPCCAFFEKLDEQKDFNY-PDGVYNLQNLRKLGQQKGICP 185
Query: 192 YFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSV 251
YFL+R++V A++VVYSY Y+LDPK+A ++SK + S VVFDEAHNIDNVCIE++SVS+
Sbjct: 186 YFLSRNVVDRAHIVVYSYHYILDPKIAELVSKNFSRHSCVVFDEAHNIDNVCIESMSVSL 245
Query: 252 RRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL----ALRGNLPNAWLSNPA 307
+ T+E AT+ L + + ++R + ++ +LR EY+RLVEGL R N + L+NP
Sbjct: 246 TKTTVEKATQKLGILEEHVQRLREENSEQLRVEYDRLVEGLRRIEEERTN--DQILANPV 303
Query: 308 LPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQ 367
LP ILKEAVPG IR A HF+ LRR +YL+ R+ T+ V E P +F+ I ID+
Sbjct: 304 LPDMILKEAVPGTIRNALHFISFLRRFNEYLKHRMRTKTVLIESPAAFLRDINDLMHIDR 363
Query: 368 KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIP 427
+ LRFC ER SL TLE+ D +F + I +FATLV TY RGF+I+IEP DE+
Sbjct: 364 RPLRFCAERFASLTRTLELADISDFSSLVLITNFATLVSTYARGFTIVIEPLDEKSGTSH 423
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC 487
L LSC DAS+A++P+F R+ +VVITSGTLSP+D+YP++L+F P + S M+L R C
Sbjct: 424 SCTLHLSCMDASVAIRPIFQRYHTVVITSGTLSPLDMYPKILDFDPAIMASLSMTLARPC 483
Query: 488 ICPMVLTRGS-------DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
I P+++++GS DQ+ ++++F+ R D V RNYG L++E+ S+VPDG+V FF SY
Sbjct: 484 IAPLIVSKGSVAYAHSNDQVAMTSRFESREDAAVIRNYGSLVLELASLVPDGVVVFFTSY 543
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
YM+ +I+TW D GI+ E++++KL+FIET D +ET++AL+ Y +ACDCGRGA+FFSVARG
Sbjct: 544 LYMENVISTWYDQGIIDELLKYKLLFIETTDALETSIALEKYVEACDCGRGAIFFSVARG 603
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQ 660
KV+EGIDF H GR VIM GVP+ YT S+IL ARLEYLR+ I+E DFLTFDA+RQAAQ
Sbjct: 604 KVSEGIDFSHHLGRAVIMLGVPYVYTESRILRARLEYLREQLGIRENDFLTFDAMRQAAQ 663
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
C+GR +R K+DYG+M+FADKR+SR DK KLP WI ++ ++NLS + A+ IAR++
Sbjct: 664 CMGRALRGKSDYGLMVFADKRFSRKDKMGKLPRWIQEYITPGNVNLSIEEAVIIARKWFP 723
Query: 721 KMAQPYDKAGSIGRKTLLSQADLEK 745
MAQ + K +G L + EK
Sbjct: 724 LMAQSFTKEHQLGISLLTEEMLREK 748
>gi|145240349|ref|XP_001392821.1| DNA repair helicase rad15 [Aspergillus niger CBS 513.88]
gi|134077338|emb|CAK39953.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/756 (50%), Positives = 527/756 (69%), Gaps = 6/756 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L ++ + LG A+GL+SRKNLC++
Sbjct: 61 QHYPEH-RKLIYCSRTMSEIEKALAELKALMKFRAKELGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LKYGEEHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L ATR + + ++I K +DA +L+ EY++LVEGL A +
Sbjct: 240 NVCIESLSIDLTEDSLRKATRGANNLERKINEMKTSDAEKLQNEYSKLVEGLQAAEQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+
Sbjct: 300 EDQFISNPVLPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVMHTISETPPSFLTH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 VKDLTYIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVF+RF SV+ITSGTLSP+++YP++L F+ V+ S
Sbjct: 420 FESEAATVPNPVLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLGFNAVMQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG L++E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGALLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWINQAMLESETNLSTDMAAATAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINE 754
LR MAQP+ G T S AD+E+ + E
Sbjct: 718 LRTMAQPFKARDQEGIST-WSLADIERHREKQKLEE 752
>gi|50293749|ref|XP_449286.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528599|emb|CAG62260.1| unnamed protein product [Candida glabrata]
Length = 775
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/754 (49%), Positives = 527/754 (69%), Gaps = 9/754 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++KR LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPKIYPEQYQYMRDIKRTLDAGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+ + LG + +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRAKELGFKEEFRGLGLTSRKNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V + VD CR+ T + E+P N+E C++ EN + LP GV++ +
Sbjct: 120 VSKERSGTIVDEKCRRMTNGQAKKKLEEDPEANVELCDYHENLYQLDVENYLPNGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +Q+ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLIKYCEQKVLCPYFIVRRMISMCNIIIYSYHYLLDPKIAERVSHEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA---LR 295
IDNVCIE+LS+ + L AT+ + +N+ I + DA +L+ EY +LV+GL +
Sbjct: 240 IDNVCIESLSLDLTNDVLRKATKGANTLNERIAEARQVDARKLQDEYEKLVQGLHAEDIM 299
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
++ P LP D+LKEA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 TQTEEPFVETPVLPQDLLKEAIPGNIRRAEHFISFLKRLIEYLKTRMKVLHVISETPRSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLEI D +EF ++ I FATLV TY GF++I
Sbjct: 360 LQHLKQLTFIDRKPLRFCSERLSLLVRTLEIEDVEEFAALKDIATFATLVSTYEDGFTLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFETVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ MSL + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYSMSLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE++R+ ++I+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+MI AD+R+SR KR++LP WI L +A LNLSTDMA+ A
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMILADRRFSR--KRNQLPKWIAQGLSEADLNLSTDMAISNA 717
Query: 716 REFLRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
++FLR MAQP D G ++ S DL K ND
Sbjct: 718 KQFLRTMAQPTDPKDQQG-VSVWSYNDLIKYQND 750
>gi|291414826|ref|XP_002723661.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 2 protein [Oryctolagus
cuniculus]
Length = 713
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/730 (52%), Positives = 505/730 (69%), Gaps = 49/730 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYMLELKR LDAK
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAK------------------------- 35
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ EL+ L ++ + G L + LSSRKNLC++
Sbjct: 36 ----------------------VIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPE 73
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS++RA ++ + C F+E ++ LP G+Y L DL
Sbjct: 74 VTPLRFGKDVDGKCHSLTASYIRAQYQQDASRPHCRFYEEFDAHGRQVPLPAGIYNLDDL 133
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 134 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 193
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + ++R K TD RLR EY RLVEGL A
Sbjct: 194 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVQRIKETDEQRLRDEYRRLVEGLREASVARE 253
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL+++++ RL ++V +E P +F++S
Sbjct: 254 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEFVKWRLRVQHVVQESPPAFLSS 313
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I +K LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEP
Sbjct: 314 LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP 373
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
FD+R P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +
Sbjct: 374 FDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT 433
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF
Sbjct: 434 FTMTLARVCLCPMIVGRGNDQVAISSKFESREDMAVIRNYGNLLLEMSAVVPDGIVAFFT 493
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 494 SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA 553
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R A
Sbjct: 554 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA 613
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ F
Sbjct: 614 AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF 673
Query: 719 LRKMAQPYDK 728
LR+MAQP+ +
Sbjct: 674 LRQMAQPFHR 683
>gi|390366297|ref|XP_003731011.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Strongylocentrotus purpuratus]
Length = 672
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/663 (55%), Positives = 487/663 (73%), Gaps = 3/663 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V+FPYD IYPEQ+ YM+ELK+ LDAKGH +LEMP+GTGKT++LL+LI +Y+
Sbjct: 1 MKVNVDGLLVHFPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYI 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L +Y G + + LSSRKNLC++
Sbjct: 61 QANPHELTKLIYCSRTVPEIEKAVEELRRLLDYIEEQTGEKPNFVGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD+ C TAS++R +P + C+F+E ++ A + + PG Y+L DL
Sbjct: 121 VSKERIGKVVDSKCHSLTASYIRERRKHDPAVPICDFYEEFDAAGRDSPIEPGAYSLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ G+Q GWCPYFLAR+ + AN++VYSY YLLDPK+A +SKE+ K+S V+FDEAHNID
Sbjct: 181 KEIGRQNGWCPYFLARYTITHANIIVYSYHYLLDPKIAEQVSKELSKQSAVIFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE++SV++ R+TL+ + +NL + + I R K TDA RLR EY RLV+GL A R
Sbjct: 241 NVCIESMSVNISRKTLDKSNQNLDSLTRHINRIKDTDAQRLREEYQRLVDGLREASRARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ LSNPALP ++L EAVPGNIR AEHF+ LRR V+YL+ RL ++V E P SF+
Sbjct: 301 TDVHLSNPALPDEVLDEAVPGNIRTAEHFIGFLRRFVEYLKTRLRVQHVISETPASFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDT-DEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ + I++K LRFC ERLHSL+ TLE+TD D + + FATLV TYT+GFS+IIE
Sbjct: 361 VFSKVCIERKPLRFCAERLHSLLRTLELTDVQDNMSPLVAVSGFATLVSTYTKGFSLIIE 420
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
PFD++ P I +PVL SC DAS+A+KPVFDRFQSVVITSGTLSP+D+YP++L+F PV
Sbjct: 421 PFDDKTPTISNPVLHFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMYPKILDFRPVSMA 480
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF M+L+R ICP+++ RG+DQ+ +S++F+ R D V RNYG L+VE+ IVPDGIV FF
Sbjct: 481 SFSMTLSRSSICPIIVARGNDQVTISSRFESREDVAVIRNYGNLIVELSGIVPDGIVAFF 540
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY+YM+ ++ATW + GI+ I ++KL+FIETQD ET++AL+NY KAC+ GRGA+ SV
Sbjct: 541 TSYTYMESVVATWYEQGIIDSIQKNKLLFIETQDAAETSIALNNYHKACENGRGAILLSV 600
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDFD HYGR VIM G+P+ YT S+IL ARLEYLRD +QIKE DFLTFDA+R
Sbjct: 601 ARGKVSEGIDFDHHYGRAVIMLGIPYVYTQSRILKARLEYLRDQYQIKENDFLTFDAMRH 660
Query: 658 AAQ 660
AAQ
Sbjct: 661 AAQ 663
>gi|427782715|gb|JAA56809.1| Putative excision repair cross-complementing rodent repair
deficiency complementation group 2 [Rhipicephalus
pulchellus]
Length = 718
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/701 (52%), Positives = 508/701 (72%), Gaps = 3/701 (0%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT+ LLSLI +Y + P KL+YC+RT+ E+EK + EL+ L + R G
Sbjct: 1 MPSGTGKTVTLLSLILAYQKANPAMISKLLYCSRTLPEIEKVVEELRRLLEHYKRETGED 60
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
+L + L+SRKNLC++ +V + VD C TAS+ RA A +P + C FFEN+
Sbjct: 61 MDLLGLCLTSRKNLCIHPQVSLERDGRVVDGRCFSLTASYRRA-QATDPETQCCTFFENF 119
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+ LP G+Y++ DL+ +G+++ CPYF+AR V A VVVYSY YLLDPK+A ++
Sbjct: 120 DSQGRDIPLPTGIYSVDDLKEYGRERQLCPYFVARQAVLNAKVVVYSYHYLLDPKIAEVV 179
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
SKEM + +VV+FDEAHNIDNVCIE++SV + ++T+EG+ N+ ++ I+ K DA +L
Sbjct: 180 SKEMSRNAVVIFDEAHNIDNVCIESMSVRLTKRTIEGSMENIDNLDHTIKELKEQDAEKL 239
Query: 282 RAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR 339
R EY +L+EGL A + L+NP LP ++L+EAVPGNIR AEHF+ LRRLV+Y++
Sbjct: 240 RTEYEQLLEGLRQAKEAREADLILANPVLPDEVLEEAVPGNIRLAEHFVSFLRRLVEYVK 299
Query: 340 GRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC 399
R+ +++ +E P +F+ I +++K LRF ERL SL+ TLE+ D F + +C
Sbjct: 300 MRMRAQHMVQESPAAFLKDILQKVCLERKPLRFSAERLRSLLRTLEVPDPTNFSPLVRLC 359
Query: 400 DFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTL 459
FA+LV TYT+GF+II+EP+DER P +P+PV+ LSC DASL++KPVF+RFQSV+ITSGTL
Sbjct: 360 HFASLVSTYTKGFTIIVEPYDERSPGVPNPVINLSCMDASLSIKPVFNRFQSVIITSGTL 419
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
SP+++YP++L+F PVVS S ++L R ICP+++++GSDQ+ +S++F+ R + V RNYG
Sbjct: 420 SPVEMYPKILDFRPVVSASLSITLARPSICPLIVSKGSDQVALSSRFETREEVSVVRNYG 479
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
LLVE+ S VPDG+VCFF SY Y++ ++A W + G+L ++ + KL+F+ET D ET LAL
Sbjct: 480 ALLVELASCVPDGLVCFFTSYVYLESVVAAWYEQGVLDQLQRRKLLFLETPDAAETALAL 539
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
NY KAC+ GRGAV SVARGKV+EG+DFD H GR V+MFG+PF YT S+IL ARLE+LR
Sbjct: 540 ANYVKACENGRGAVLLSVARGKVSEGVDFDHHLGRAVLMFGIPFVYTQSRILRARLEFLR 599
Query: 640 DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
D FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+SR DKRSKLP WI HL
Sbjct: 600 DQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRWDKRSKLPRWIQEHL 659
Query: 700 RDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQ 740
+D+ NLST+ AL + + FLR+MAQP+ + +G L ++
Sbjct: 660 QDSLCNLSTEEALQVVKRFLRQMAQPFTREDQLGVSLLTAE 700
>gi|344299882|gb|EGW30235.1| DNA helicase component of transcription factor b [Spathaspora
passalidarum NRRL Y-27907]
Length = 792
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/746 (49%), Positives = 517/746 (69%), Gaps = 16/746 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPKIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE K++YC+RT+ E+EK L EL L Y+ LG +GL+SRKNLC++
Sbjct: 61 MHYPEQR-KIVYCSRTMSEIEKALIELYKLMEYRANELGYVEDFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVR----------ALAAENPNIET-CEFFENYEKAASAAV 169
+ VD CR+ T ++ A+NP + + C F EN E +
Sbjct: 120 ISKERKGVVVDEKCRRITNGQLKNKIEKGMISEQQQADNPEVNSLCSFHENLEDMDQHDL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+PPGVY+ L + KQ+G CPYF R M+ F N+++YSY YLLDPK+A +SKE+ K+S
Sbjct: 180 IPPGVYSFDGLLKYCKQRGTCPYFTVRRMMPFCNIIIYSYHYLLDPKIADRVSKELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+V+FDEAHNIDNVCIE+LS+ + TL+ ATR +++ IE KA D+ +L+ EY +LV
Sbjct: 240 IVIFDEAHNIDNVCIESLSLDLTEDTLKRATRGANKLGDAIEEMKAQDSEKLQNEYEQLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A ++SNP LP D+L EA+PGNIR+ EHF+ L+R ++YL+ R++ +V
Sbjct: 300 EGLRQAEIARNEELFMSNPILPQDLLDEAIPGNIRKGEHFIAFLKRFIEYLKTRMKVLHV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P+SF+ + ID+K LRFC ERL L+ TLE+ + ++F ++ I FATLV T
Sbjct: 360 ISETPISFLKHLKELTYIDRKPLRFCSERLSLLVRTLELAEIEDFNALKDIATFATLVST 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF +I+EP++ +P+P+L +C DAS+A+KPVF+RF S++ITSGT+SP+D+YP+
Sbjct: 420 YDTGFQLILEPYETEGSSVPNPILHFTCLDASIAIKPVFERFYSIIITSGTISPLDMYPK 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+LNF V+ S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LLVE
Sbjct: 480 MLNFQTVIQESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLVEFSK 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W + G+L E+ ++KL+ +ET D ET+LAL+ YRKAC
Sbjct: 540 ITPDGMVVFFPSYLYMESIISMWQNMGVLDEVWKYKLILVETPDAQETSLALETYRKACS 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD FQI+E
Sbjct: 600 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIREN 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+SR K+++LP WI L D+ NLS
Sbjct: 660 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSR--KKNQLPKWIAQALNDSDTNLS 717
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIG 733
TDMAL A+ FLR +AQP + G
Sbjct: 718 TDMALATAKRFLRSLAQPANPKDQEG 743
>gi|324507092|gb|ADY43014.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Ascaris suum]
Length = 761
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/748 (50%), Positives = 523/748 (69%), Gaps = 8/748 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ YM E+K+ LDA+GH LLEMP+GTGKTI+LLSL+ +Y+
Sbjct: 1 MKIDVDGLEVYFPYDYIYPEQVLYMEEVKKTLDAQGHALLEMPSGTGKTISLLSLVLAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L P+ KLIYC+RT+ E+EK + EL+ L Y + G +LA+ +S+RKNLC+N
Sbjct: 61 LKFPDKLDKLIYCSRTIPEIEKCVEELRNLFKYYEQVNGKRPALLALAISARKNLCINES 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V +VD AC++ TA +VRA P++ C FFE ++ A VLP GVY L +L
Sbjct: 121 VACLRQGSAVDGACQRLTAGFVRAKRKLQPDLPACSFFEKFD-AQREVVLPAGVYNLSNL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
R +G Q+G CPYF+AR AN++VYSY Y+LDPK+A ++SK + S VVFDEAHNID
Sbjct: 180 RKWGHQKGVCPYFMARANADRANIIVYSYHYILDPKIAELVSKNFSRRSCVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL----RG 296
NVCIE++SVS+ + T+E A + ++ +++ ++R K ++ RL+ EY RLVEGL R
Sbjct: 240 NVCIESMSVSLTKSTVEKAMQKVALLDKHVQRLKEENSERLQNEYERLVEGLRQVEQDRA 299
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
N + L+NP LP IL+EAVPG+IR A+HF++ LRR ++YL+ R+ + V E P SF+
Sbjct: 300 N--DETLANPVLPDSILQEAVPGSIRTAQHFINFLRRFIEYLKYRMRSTTVLVESPASFL 357
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
I I+++ LRFC ER SL TLE+ D +F + + +FATLV +Y GFS+II
Sbjct: 358 FDIQERMYIERRPLRFCTERFASLARTLELADISDFHSLVLVTNFATLVSSYGPGFSLII 417
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP DE+ + L+C DAS+A++P+ RFQSV+ITSGTLSP+++YP++L+F P V
Sbjct: 418 EPLDEKSGDAHSCTMHLNCMDASIAIRPILQRFQSVIITSGTLSPLEMYPKILDFDPAVM 477
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
S M+L R CI P+++++G+DQ+ ++++F+ R D V RNYG L++E+ SIVPDG+V F
Sbjct: 478 ASLSMTLARPCIAPLIVSKGNDQVAITSRFESRDDAAVIRNYGNLVLEVASIVPDGVVVF 537
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ +++ W D I+ E+M+HKL+FIET D +ET++AL+ Y +ACD GRGA+ FS
Sbjct: 538 FTSYVYMENVVSIWYDQRIIDELMKHKLLFIETTDALETSVALEKYVEACDSGRGAILFS 597
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDF H GR VIM G+P+ YT S+IL ARLEYLR+ IKE DFLTFDA+R
Sbjct: 598 VARGKVSEGIDFSHHLGRAVIMLGIPYVYTESRILRARLEYLREHHGIKENDFLTFDAMR 657
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQCVGR +R K DYG+MIFADKR+++ DK KLP WI +L ++NLS + A AR
Sbjct: 658 HAAQCVGRALRGKTDYGLMIFADKRFAKKDKMGKLPRWIQEYLTPGNVNLSIEEAGMTAR 717
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLE 744
+L MAQP+ K +G LL+Q LE
Sbjct: 718 RWLPLMAQPFTKEDQLG-VALLTQNMLE 744
>gi|388580610|gb|EIM20923.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 776
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/736 (50%), Positives = 525/736 (71%), Gaps = 30/736 (4%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT++LLSLI +Y + KL+YC+RTV E+EK LAELK L Y+ G A
Sbjct: 1 MPSGTGKTVSLLSLIVAY-QQHYDADRKLVYCSRTVPEIEKALAELKRLMAYRADQ-GYA 58
Query: 102 AK---ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNI-ETCEF 157
AK + +GLSSRKNLC++ + +VDA CR T++ +P E C +
Sbjct: 59 AKDSGYIGLGLSSRKNLCLHPSISQERRGKAVDARCRDLTSAHAVQKGRSDPGSHELCSY 118
Query: 158 FENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
E + A ++PPG++T++D++ FG+Q+G+CPYF R MV F N ++YS+ YLLDPKV
Sbjct: 119 HEGLSEVAPGEIVPPGIWTIEDVKKFGQQKGYCPYFSVRRMVPFCNTIIYSFHYLLDPKV 178
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATD 277
A ++S+EM K+++VVFDEAHNIDNVCIE+LS+ + R LE A+R++ +++++I K D
Sbjct: 179 AEMVSREMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLESASRSVDKLSEKIAEVKEND 238
Query: 278 AGRLRAEYNRLVEGLALRGNLPNAW--------------LSNPALPSDILKEAVPGNIRR 323
A RL+ EY +LVEG+ P A LSNP LP+D+LKEA+PGNIR+
Sbjct: 239 AQRLQDEYAKLVEGMQDADQPPPAANDEMAMIRRQDEDVLSNPVLPADLLKEAIPGNIRK 298
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF+ L+R V+YL+ R+ +V E P+SF+ + I++K LRFC +RL +L+ T
Sbjct: 299 AEHFVSFLKRFVEYLKTRMRVLHVVAETPLSFLQHLRDITYIERKPLRFCSDRLSNLIKT 358
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LE+ DE+ +Q++ FATLV TY +GF +I+EPF+ IP+P+ L+C DAS+A+
Sbjct: 359 LELERLDEYSALQSVAAFATLVSTYEKGFLLILEPFESETATIPNPIFHLTCQDASIAIA 418
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PVF+RF SV+ITSGT+SP+D+YP++LNF+ +V S+ M+L+R+C PMV+TRGSDQ+ VS
Sbjct: 419 PVFERFSSVIITSGTISPLDMYPKMLNFNAIVQESYPMTLSRNCFIPMVITRGSDQVAVS 478
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
++F++R+DP V RNYG++L+E ++PDGIV FF SY YM+ I++ WN+ IL E+ +HK
Sbjct: 479 SRFEVRNDPAVVRNYGQMLIEYSKVIPDGIVAFFPSYLYMESIVSAWNEMQILDEVWKHK 538
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+F+ET D ET++AL+N+RKACD GRGAV SVARGKV+EGIDFD H+GR VIMFGVP+
Sbjct: 539 LIFVETPDAPETSIALENFRKACDNGRGAVMLSVARGKVSEGIDFDHHFGRAVIMFGVPY 598
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
QYT S+IL ARLEYLRD +I+E DFLTFDA+R AAQCVGRV+R K+DYG+MIFADKR++
Sbjct: 599 QYTESRILKARLEYLRDNHRIRESDFLTFDAMRHAAQCVGRVLRGKSDYGLMIFADKRFA 658
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGS----------IG 733
R DKR+KLP WI ++ + NLSTDMA+ +A+ F+R MAQP+D + + +
Sbjct: 659 RSDKRAKLPRWINQYISETSSNLSTDMAISLAKRFVRTMAQPFDHSQTGVSLWTMDHVLE 718
Query: 734 RKTLLSQADLEKMTND 749
R+ L ++DL + N+
Sbjct: 719 RQRLDKESDLAAIANN 734
>gi|75858956|ref|XP_868818.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
gi|40747660|gb|EAA66816.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
Length = 797
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/753 (50%), Positives = 526/753 (69%), Gaps = 12/753 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAEL+ L +++ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALAELRELMKFRSEQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKEKGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHM------VQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
+G+Q CPYF AR M + + NV++YSY YLLDPK+A +SKE K+ +VVFD
Sbjct: 180 LNYGEQHKQCPYFSARRMPLTPVQMPYCNVIIYSYHYLLDPKIAERVSKEFSKDCIVVFD 239
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL-- 292
EAHNIDNVCIE+LS+ + +L ATR + + ++I+ K++DA +L EY +LVEGL
Sbjct: 240 EAHNIDNVCIESLSIDITEDSLRKATRGANNLERKIQDVKSSDAEKLNNEYMKLVEGLRE 299
Query: 293 ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGP 352
A + + ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P
Sbjct: 300 AEQARDEDQFISNPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETP 359
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGF 412
+SF+ + I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF
Sbjct: 360 LSFLNHVKELTFIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGF 419
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH 472
+I+EPF+ +P+PVL +C DA++A+KPVFDRF SVVITSGTLSP+++YP++L F
Sbjct: 420 LLILEPFESEAATVPNPVLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLGFT 479
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
V+ S+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +++E I PDG
Sbjct: 480 TVMQESYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDG 539
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA 592
+V FF SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA
Sbjct: 540 VVVFFPSYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGA 599
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF 652
+ F VARGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+F
Sbjct: 600 LLFCVARGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSF 659
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
DA+R AAQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L ++ NLSTDMA+
Sbjct: 660 DAMRHAAQCLGRVLRGKDDYGIMVLADRRFQK--KRNQLPKWISQALLESETNLSTDMAV 717
Query: 713 HIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
A+ FLR MAQP+ G T S ADLE+
Sbjct: 718 ATAKNFLRTMAQPFKAKDQEGIST-WSLADLER 749
>gi|239607217|gb|EEQ84204.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ER-3]
Length = 779
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/746 (51%), Positives = 519/746 (69%), Gaps = 24/746 (3%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MQFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+PE KLIYC+RT+ E+EK LAELK L Y+TR LG A +GL+SRKNLC++
Sbjct: 61 QHRPEQR-KLIYCSRTMSEIEKALAELKALMKYRTRQLGYAEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA + N + + ++PPGV+TL D+
Sbjct: 120 VKREKSGAVVDARCRSLTAGF------------------NLDLLEPSNLVPPGVFTLDDI 161
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF R M+ F NV++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNID
Sbjct: 162 IKYGEQHKQCPYFSIRRMMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNID 221
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A+R + + ++IE K++DA +L+ EY +LVEGL A
Sbjct: 222 NVCIESLSIDLTEDSLRKASRGATNLERKIEEMKSSDAEKLQNEYQKLVEGLREADEARQ 281
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF+A
Sbjct: 282 EEQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAH 341
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 342 LKDLTFIERKPLRFCAERLASLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEP 401
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV++TSGTLSP+++YP++L F V+ S
Sbjct: 402 FESETATVPNPILHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKMLKFTTVLQES 461
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PMV+TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDGIV FF
Sbjct: 462 YTMTLARRSFLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFP 521
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ YR AC GRGAV VA
Sbjct: 522 SYLYMESIISMWQGMGILDLVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVA 581
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R A
Sbjct: 582 RGKVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHA 641
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRVIR K DYG+M+ AD+R+ + +RS+LP WI + ++ NLSTDMA+ A+ F
Sbjct: 642 AQCLGRVIRGKDDYGVMVLADRRFQK--RRSQLPKWISQAMLESETNLSTDMAVATAKSF 699
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
LR MAQP+ G T S ADLE
Sbjct: 700 LRTMAQPFKSRDQEGIST-WSLADLE 724
>gi|367035588|ref|XP_003667076.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila ATCC
42464]
gi|347014349|gb|AEO61831.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila ATCC
42464]
Length = 799
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/728 (51%), Positives = 513/728 (70%), Gaps = 7/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYP +YM++LK+ LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFNIDDLPVLFPYPRIYPG--NYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 58
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P + KLIYC+RT+ E+EK L ELK L ++ LG + +GL+SRKNLC++
Sbjct: 59 QYYPSHR-KLIYCSRTMSEIEKALVELKALMKFRAERLGYEEEFRGLGLTSRKNLCLHPS 117
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ + VDA CR TA +++ + ++E C + +N + ++P GV+T +
Sbjct: 118 VKREKSGNVVDARCRSLTAGFIKEKKEKGEDVEVCVYHDNLDLLEPHNLIPNGVWTFDGI 177
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+Q+ NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 178 LRYGEQHKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 237
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIEALS + +L ATR + +I + +D +L+ EY +LVEGL A G
Sbjct: 238 NVCIEALSTDITDDSLRKATRGAQNLENKINEMRESDQQKLQDEYEKLVEGLKGADDGRQ 297
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+++++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+A
Sbjct: 298 EDSFMANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAH 357
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ H I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 358 LKEHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEP 417
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVFDRF SVVITSGTLSP+++YP++LNF VV S
Sbjct: 418 FESDTAEVPNPVLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLNFPTVVQES 477
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 478 YSMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFP 537
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 538 SYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVA 597
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 598 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 657
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ R KR++LP WI L DA +NLSTDMA+ AR F
Sbjct: 658 AQCLGRVLRGKDDYGLMVLADRRFQR--KRAQLPKWISQALLDADVNLSTDMAVSSARRF 715
Query: 719 LRKMAQPY 726
LR MAQP+
Sbjct: 716 LRTMAQPF 723
>gi|310798566|gb|EFQ33459.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 791
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/747 (50%), Positives = 522/747 (69%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDELPVIFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y+ LG + +GL+SRKNLC++
Sbjct: 61 QHNPEHR-KLIYCSRTMSEIEKALAELKALMKYRAEELGEEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ +++ C + +N + ++P GV+T + L
Sbjct: 120 VKQEKSGAIVDARCRSLTAGFVKEKKDRGESVDVCVYHDNLDLLEPHNLIPNGVWTFEGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+QF NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEQHKQCPYFTARRMMQFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L ATR + + I + TD +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSTDITEDSLRKATRGAQNLERRIAEMRDTDQEQLQNEYQKLVEGLRGADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+A
Sbjct: 300 EDAFMANPALPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVRHTISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++L F VV S
Sbjct: 420 FESETAEVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTMSPLEMYPKMLGFSTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQSSISTSFQVRNEPSVVRNYGTLLTEFAKITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W IL+E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMNILEEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L DA N+STDMA+ AR F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQK--KRAQLPKWINQGLLDADTNVSTDMAVSSARRF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
L++MAQP+ G T S DL K
Sbjct: 718 LKQMAQPFRAKDQEGVST-WSYEDLMK 743
>gi|193606019|ref|XP_001943653.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Acyrthosiphon pisum]
Length = 756
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/728 (50%), Positives = 514/728 (70%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY+ IYPEQY+YM+ELK+A+DAKGHCLLEMP+GTGKTI +LSLI +Y+
Sbjct: 1 MKFFIDELEVLFPYEYIYPEQYAYMVELKKAIDAKGHCLLEMPSGTGKTITILSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KL+Y TRT+ E+EK EL++L +Y + A +L + LSSRKNLCVN
Sbjct: 61 IKYPAKLGKLLYSTRTLSEIEKAAEELRVLCDYYKSN-KYDANVLGVVLSSRKNLCVNPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+ N VDA C TA +VRA A+ + CEF+E + +LPP +Y ++DL
Sbjct: 120 IAGEHNGRVVDARCHALTAPFVRARHADGEAVNVCEFYEKLDSLGRDTILPPNIYNIEDL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ G +QG CPYF+AR + ANVV+YSY YLLDPK+AGI+SK+ K ++VVFDEAHNID
Sbjct: 180 KELGVKQGICPYFVARQTLIHANVVIYSYHYLLDPKIAGIVSKDFNKNTIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI++LS + L+ A L++++ E+ K D+ RL+ EY ++V+GL R
Sbjct: 240 NVCIDSLSSHITSNNLDKAIEGLNKLDTEVTAMKERDSQRLKEEYRKMVDGLREIYRNRE 299
Query: 299 PNAWLSNPALPSDILK-EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
NA L+NP +P +LK +PG+IR AEH++ ++R + YL+ R+ + V +E P+ F+
Sbjct: 300 ANAALANPIVPDQVLKITELPGSIRSAEHYIGFMKRFIMYLKLRMNSTTVVQETPIMFIK 359
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ I++K LRFC ERL SL+ TLEI++ +F + T+ FATLV TY +GF IIIE
Sbjct: 360 DVYQKVCINRKPLRFCTERLSSLLRTLEISEITDFSPLITVAQFATLVSTYMKGFMIIIE 419
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
PFDER V+ SC DAS+A+KP+ D F +V+ITSGTLSP+D+YP++LN +PV+
Sbjct: 420 PFDER-SSTDSCVMHFSCLDASIAIKPILDYFNTVLITSGTLSPLDMYPKILNINPVIMT 478
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
S M+L+R C PMV+ RG+DQ+ +++K++ R D VARNYG LL+EMV +VPDG+VCFF
Sbjct: 479 SLTMTLSRQCFLPMVVGRGNDQVALTSKWESREDSSVARNYGHLLLEMVKVVPDGVVCFF 538
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM ++A W D G++++I+ +KL+FIETQ++V T A+ Y +A + G+GA+ SV
Sbjct: 539 PSYLYMKSVVAAWYDQGLIEKILDYKLIFIETQNIVVTNHAIKCYAEAIERGKGALLLSV 598
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EG+DFD HYGR VI+ G+P+ YT +IL AR+EYL +QI EGDFLTFDA+R
Sbjct: 599 ARGKVSEGMDFDHHYGRAVIVLGMPYVYTQCRILKARMEYLCSQYQISEGDFLTFDAMRH 658
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AQCVGR IR K DYG+M+FADKR++RHDKRSKLP WI ++L D NL+ D A +A+
Sbjct: 659 TAQCVGRAIRGKMDYGIMVFADKRFARHDKRSKLPKWIQAYLTDNVCNLTVDEAAQMAKR 718
Query: 718 FLRKMAQP 725
+LR +AQP
Sbjct: 719 WLRYIAQP 726
>gi|320593951|gb|EFX06354.1| tfiih complex helicase [Grosmannia clavigera kw1407]
Length = 793
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/747 (50%), Positives = 518/747 (69%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYP SYM +LKR LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFNIDDLPILFPYPRIYPVSNSYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P KLIYC+RT+ E+EK LAELK L Y+T+ LG + +GL+SRKNLC++
Sbjct: 61 QYYP-GQRKLIYCSRTMSEIEKALAELKALMKYRTQELGYEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V ++ C + +N +K ++P GV+TL L
Sbjct: 120 VKREKSGSVVDARCRSLTAGFVIEKKERGEDVNVCIYHDNLDKLEPHNLIPNGVWTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF +R M+QF NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEEHKQCPYFTSRRMMQFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L ATR + ++I + TD +L EY +LV+GL A
Sbjct: 240 NVCIESLSTDITEDSLRKATRGAQNLEKKINEMRETDQKQLENEYQKLVQGLREADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF+A
Sbjct: 300 EDAFMTNPTLPEDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ ++ + FATLV TY +GF +I+EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLASLVRTLELTNIEDYQPLREVATFATLVATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVF+RF SV+ITSGT+SP+++YP++L F+ VV S
Sbjct: 420 FESDTAEVPNPVLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLGFNTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 480 YTMTLARRSFLPMIVTRGSDQAAMSTSFQVRNEPSVVRNYGTLLTEFAKITPDGLVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLSMGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+RY + KR++LP WI L +A NLSTDMA+ A++F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRYQK--KRNQLPKWINQALLEADANLSTDMAVSNAKKF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S DL K
Sbjct: 718 LRDMAQPFHARDQEGIST-WSLRDLRK 743
>gi|406605469|emb|CCH43113.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 781
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/752 (48%), Positives = 524/752 (69%), Gaps = 11/752 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ + LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHNLMTYRAKELGYVEDFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRAL--AAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V + VD CR+ T+ + + E N++ CEF EN + ++PPGVY+
Sbjct: 120 VSKEKKGSIVDEKCRRMTSGLAKRKIESGETENVDLCEFHENLYELEPDNLVPPGVYSFD 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + K Q CPYF R M+ F N+++YSY YLLDPK++ +SKE+ K+S+++FDEAHN
Sbjct: 180 SLTNYCKDQKTCPYFTVRRMIPFCNIIIYSYHYLLDPKISERVSKELSKDSIIIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L+ A++ + +++ IE K TD+ +L+ EY +LV GL+ +
Sbjct: 240 IDNVCIESLSLDLNNDVLKKASKGANSLSKRIEEVKKTDSKKLQDEYEKLVSGLSAADII 299
Query: 299 PN--AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
N + P L D+LKEA+PGNIRRAEHF+ L+R ++YL+ R++ +V E P SF+
Sbjct: 300 NNEQQMMETPVLSEDLLKEAIPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVISETPTSFL 359
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
+ I++K LRFC ERL L+ TLEITD +++ ++ + FATLV TY +GF++I+
Sbjct: 360 QHVKQLTFIERKPLRFCSERLSLLVRTLEITDVEDYNALKDVATFATLVSTYEQGFALIL 419
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP++ +P+P+L+ +C DAS+A+KP+F+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 EPYETENATVPNPILRFTCLDASIAIKPIFERFSSVIITSGTISPLDMYPRMLNFETVIQ 479
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
S+ M+L + P+V+T+GSDQ+ +S++F++R+DP + RNYG LL+E I PDG+V F
Sbjct: 480 ESYSMTLAKRSFLPLVVTKGSDQVAISSRFEIRNDPSIVRNYGSLLIEFSKITPDGMVVF 539
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ II+ W GIL E+ ++KL+ +ET D ET LAL+ YR AC GRGA+ S
Sbjct: 540 FPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETALALETYRTACSNGRGAILLS 599
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD +QI+E DFL+FDA+R
Sbjct: 600 VARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDHYQIRENDFLSFDAMR 659
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQC+GRV+R K DYG+MI AD+R+ R KR++LP WI L DA NLSTDMA+ A+
Sbjct: 660 HAAQCLGRVLRGKDDYGVMILADRRFGR--KRNQLPKWIQQALLDADTNLSTDMAVANAK 717
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
+FLR MAQP + G +S DLE++ N
Sbjct: 718 QFLRTMAQPTNPKDQEG----VSVWDLEQLQN 745
>gi|296822250|ref|XP_002850254.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
gi|238837808|gb|EEQ27470.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
Length = 792
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/738 (49%), Positives = 519/738 (70%), Gaps = 5/738 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKTI LL+LI +Y
Sbjct: 1 MEFYIDDLPILFPYPRIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L+EL L Y+++ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALSELHALMKYRSQKLGAVEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKEKGEDVELCIYHENLDLLEPGNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+Q+ NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 180 IKYGEQYKQCPYFSARRMMQYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A+R + + ++I+ K+TDA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKASRGANNLERKIDEMKSTDAEKLQNEYQKLVEGLQEADEARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NP LP D+LKE+VPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 300 EEQLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F + S
Sbjct: 420 FESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFDAALQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +L+E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDSVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDALR A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDALRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWISQAMLESETNLSTDMAVATAKIF 717
Query: 719 LRKMAQPYDKAGSIGRKT 736
L+ MAQP+ G T
Sbjct: 718 LKSMAQPFKAKDQEGIST 735
>gi|303317606|ref|XP_003068805.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108486|gb|EER26660.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038802|gb|EFW20737.1| DNA repair helicase RAD3 [Coccidioides posadasii str. Silveira]
Length = 795
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/747 (50%), Positives = 523/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+Y+ +LK+ LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P + KLIYC+RT+ E+EK L EL+ L Y+ + LG A+GL+SRKNLC++
Sbjct: 61 QHYPSH-RKLIYCSRTMSEIEKALTELRELMKYREQQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TAS+V+ + ++E C + EN + + ++PPGV+TL L
Sbjct: 120 VRREKSGTVVDARCRSLTASFVKERKEKGEDVELCLYHENLDLLEPSNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 IRYGEQHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R + + +I+ K +DA +L+ EY +LVEGL A +
Sbjct: 240 NVCIESLSIDITEDSLRKAGRGANNLGHKIDEMKRSDAAKLQKEYEKLVEGLREADQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 300 EDQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHAISETPLSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +E+ +Q I FATLV TY +GF +I+EP
Sbjct: 360 LKDLTYIERKPLRFCAERLTSLVRTLELMNIEEYRPLQEIATFATLVSTYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVF+RF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESDTATVPNPVLHFTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLGFQTVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDGIV FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDSQESSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S IL ARL ++ + ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESPILKARLRFMLENYRIREDDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI ++ ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQK--KRNQLPKWISQNILESETNLSTDMAVATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S ADLE+
Sbjct: 718 LRTMAQPFKAKDQEGIST-WSLADLER 743
>gi|392870657|gb|EAS32475.2| DNA repair helicase rad15 [Coccidioides immitis RS]
Length = 795
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/747 (50%), Positives = 523/747 (70%), Gaps = 6/747 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+Y+ +LK+ LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P + KLIYC+RT+ E+EK L EL+ L Y+ + LG A+GL+SRKNLC++
Sbjct: 61 QHYPSH-RKLIYCSRTMSEIEKALTELRELMKYREQQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TAS+V+ + ++E C + EN + + ++PPGV+TL L
Sbjct: 120 VRREKSGTVVDARCRSLTASFVKERKEKGEDVELCLYHENLDLLEPSNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 IRYGEQHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R + + +I+ K +DA +L+ EY +LVEGL A +
Sbjct: 240 NVCIESLSIDITEDSLRKAGRGANNLGHKIDEMKRSDAAKLQKEYEKLVEGLREADQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 300 EDQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHAISETPLSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +E+ +Q I FATLV TY +GF +I+EP
Sbjct: 360 LKDLTYIERKPLRFCAERLTSLVRTLELMNIEEYRPLQEIATFATLVSTYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVF+RF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 420 FESDTATVPNPVLHFTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLGFQTVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDGIV FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 540 SYLYMESIISMWQGMGILDSIWNYKLILVETPDSQESSLALETYRTACCNGRGAILLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S IL ARL ++ + ++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESPILKARLRFMLENYRIREDDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI ++ ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQK--KRNQLPKWISQNILESETNLSTDMAVATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S ADLE+
Sbjct: 718 LRTMAQPFKAKDQEGIST-WSLADLER 743
>gi|320583366|gb|EFW97581.1| DNA repair helicase RAD3 [Ogataea parapolymorpha DL-1]
Length = 1061
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/750 (49%), Positives = 528/750 (70%), Gaps = 12/750 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F ++D+ V FPY IYPEQY+YM ++KR LD G+C+LEMP+GTGKTI+LLSL +Y +
Sbjct: 299 FFIDDLPVLFPYPKIYPEQYAYMCDIKRTLDVGGNCILEMPSGTGKTISLLSLTVAYQMH 358
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
PE+ K++YC+RT+ E+EK L EL L Y+++ LG +GL+SRKNLC++ +
Sbjct: 359 YPEHR-KIVYCSRTMSEIEKALIELHKLMEYRSKELGFVEDFRGLGLTSRKNLCLHP--V 415
Query: 123 AAENRDSV--DAACRKRTASWVRAL--AAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
A+ R V D CR+ T ++A + + C F E + A ++PPGVY+ +
Sbjct: 416 ASRERKGVVVDEMCRRMTNGQLKARIEQGQASTDQLCSFHEKLYEKDPANLVPPGVYSFE 475
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + K +G CPYF R M+ F N+++YSY YLLDPK+A +SKE+ ++S+++FDEAHN
Sbjct: 476 QLMKYCKMEGTCPYFTIRRMMPFCNIIIYSYHYLLDPKIAERVSKELSRDSIIIFDEAHN 535
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL---ALR 295
IDNVCIE+LS+ + L A++ + + +++E K TD+ RL+ EY +LVEGL +
Sbjct: 536 IDNVCIESLSLDLTEDVLRRASKGANALARKVEEVKKTDSKRLQDEYEKLVEGLRESEIY 595
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+A++ NP LP D+L EAVPG+IRRAEHF+ L+R ++YL+ R++ +V E PVSF
Sbjct: 596 HTDEDAFMVNPVLPDDVLTEAVPGSIRRAEHFISFLKRFIEYLKTRMKVLHVISETPVSF 655
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+ + +EF+ ++ I F TLV TY GF +I
Sbjct: 656 LQHLKQLTFIDRKPLRFCSERLSLLVRTLEVVEIEEFMALKDIATFGTLVSTYDTGFVLI 715
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+EP++ +P+P+L+ +C DAS+A+KP+F+RF SV+ITSGT+SP+D+YPR+LNF VV
Sbjct: 716 LEPYETENATVPNPILRFACLDASIAMKPIFERFSSVIITSGTISPLDMYPRMLNFETVV 775
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
S+ M+L R PMV+T+GSDQ+ +S++F++R+DP V RNYG LL+E I PDG+V
Sbjct: 776 QESYTMTLDRRSFLPMVVTKGSDQVAISSRFEIRNDPSVVRNYGTLLIEFSKITPDGMVV 835
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YRKAC GRGAV
Sbjct: 836 FFPSYLYMESIISQWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAVLL 895
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD +QI+E DFL+FDA+
Sbjct: 896 SVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDHYQIRENDFLSFDAM 955
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+++ K+S+LP WI L DA +NLSTDMA+ A
Sbjct: 956 RHAAQCLGRVLRGKDDYGVMVLADRRFAK--KKSQLPKWIAQALSDADINLSTDMAIASA 1013
Query: 716 REFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
++FLR +AQP ++ ++ + LEK
Sbjct: 1014 KKFLRTLAQPIEQKDQEQGVSVWTLDQLEK 1043
>gi|410076214|ref|XP_003955689.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
gi|372462272|emb|CCF56554.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
Length = 779
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/764 (48%), Positives = 532/764 (69%), Gaps = 17/764 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++K+ LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLSVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EKTL EL+ L +Y++R LG + +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKTLVELENLMDYRSRELGYVEEFRGLGLTSRKNLCLHPV 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNI---ETCEFFENYEKAASAAVLPPGVYTL 177
V VD CR+ T + ENP+ E CE+ EN LP GV++
Sbjct: 120 VSKERKGTVVDEKCRRLTNGVNKRKLQENPDATDAELCEYHENLYDMEVENYLPKGVFSF 179
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+ L + +++ CPYF+ R M+ N++VYSY YLLDPK+A +S E+ K+S+V+FDEAH
Sbjct: 180 EKLIKYAEEKTICPYFIVRRMISLCNIIVYSYHYLLDPKIAERVSNEVSKDSIVIFDEAH 239
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
NIDNVCIE+LS+ + L AT+ + + IE + D+ +L+ EY++LV+GL
Sbjct: 240 NIDNVCIESLSLDLTNDVLRRATKGANALEGRIEEVRKADSKKLQDEYDKLVQGLHADDI 299
Query: 298 LPNA---WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
L A ++ P L D+LKEA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P S
Sbjct: 300 LTVAEEPFVETPVLSQDLLKEAIPGNIRRAEHFISFLKRLIEYLKTRMKVLHVISETPKS 359
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
F+ + ID+K LRFC ERL L+ TLE+T+ ++F ++ I FATL+ TY GF++
Sbjct: 360 FLQHLKQLTFIDRKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEDGFTL 419
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPV 474
IIEP++ +P+P+++ SC DAS+A+KPVF++F SV+ITSGT+SP+D+YPR+LNF +
Sbjct: 420 IIEPYEIENAAVPNPIMRFSCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLNFETI 479
Query: 475 VSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIV 534
+ +S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 LQKSYSMTLDKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMV 539
Query: 535 CFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVF 594
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 VFFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAIL 599
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDA 654
SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA
Sbjct: 600 LSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDA 659
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHI 714
+R AAQC+GRV+R K DYG+M+ AD+R+SR K+++LP WI L DA LNLSTDMA+
Sbjct: 660 MRHAAQCLGRVLRGKDDYGVMVLADRRFSR--KKNQLPKWIAQGLSDADLNLSTDMAISN 717
Query: 715 AREFLRKMAQPY---DKAG----SIGRKTLLSQADLEKMTNDGS 751
++FLR MAQP D+ G S+ T Q+ +K TN+G+
Sbjct: 718 TKQFLRTMAQPTNPKDQEGVSVWSLDDLTKFQQSHQQK-TNNGN 760
>gi|308477366|ref|XP_003100897.1| hypothetical protein CRE_16215 [Caenorhabditis remanei]
gi|308264471|gb|EFP08424.1| hypothetical protein CRE_16215 [Caenorhabditis remanei]
Length = 789
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/770 (49%), Positives = 533/770 (69%), Gaps = 44/770 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPYD +YPEQ YM E+K+ALDA GH LLEMP+GTGKT++LLSL+ +Y+
Sbjct: 1 MQLDIDGLKVLFPYDYVYPEQVLYMKEVKKALDANGHGLLEMPSGTGKTVSLLSLVLAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-PAAKILAIGLSSRKNLCVNS 119
+S P+ KL+YC+RT+ E+EK + E+K+L++Y + G P AKI + +S+RKNLC+N
Sbjct: 61 ISYPDRLDKLVYCSRTIPEIEKCVEEMKVLYDYWEKETGQPVAKI-TVAMSARKNLCINE 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
+V A ++VD+AC+K TAS VRA EN IE C++FEN+E A++ + GV+ L+D
Sbjct: 120 KVAALRFGNTVDSACQKLTASSVRAKRKENSEIEGCDYFENFE--ANSFPMQNGVWNLED 177
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
LR G+++ CPYF AR+ + A++VVYSY Y+LDPK+A ++SK+ ++SVVVFDEAHNI
Sbjct: 178 LRQLGRERKICPYFTARNAINRAHIVVYSYHYILDPKIAELVSKDFSRKSVVVFDEAHNI 237
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGN 297
DNVCIE++SV++ ++ + A + L + + R K+ ++ +L++EY++LVEGL A R
Sbjct: 238 DNVCIESMSVAISQKNADRALQELQNLEGVVGRMKSANSEKLQSEYDKLVEGLKRAERER 297
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN----------- 346
+ L+NP +P DILKEAVPGNIR+A HFL L+R V+Y+R RL T
Sbjct: 298 ANDERLANPCIPDDILKEAVPGNIRQANHFLLFLKRFVEYVRHRLRTHQLFHVDSPNSKQ 357
Query: 347 -----------------------VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
V E P +F+ I I+++ +RFC ERL +L+ T
Sbjct: 358 TNVGLLAIFHWSGSCFCSIYTFQVLIESPAAFMKDIQERMCIERRPMRFCAERLANLVRT 417
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LEITD + + + TLV TY++GFS+I+EP D ++ LSCHDAS+A++
Sbjct: 418 LEITDNGDVWALSQVTTMCTLVSTYSKGFSVIVEPQDGSQM----AMITLSCHDASIAIR 473
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PV R QSV+ITSGTLSP+++YP++L+F P V SF M+L R C+ P+V+ RG+DQ+ ++
Sbjct: 474 PVLKRHQSVIITSGTLSPLEMYPKILDFDPAVVASFTMTLARPCLAPLVVARGNDQVAMT 533
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
++F+ R+D V RNYG L++EM S+VPDG+V FF SY YM+ +I W + I+ E+M++K
Sbjct: 534 SRFEQRADVAVIRNYGNLVLEMASLVPDGMVVFFTSYLYMENVIGVWYEQHIIDELMKYK 593
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+FIET D +ET+ AL+ Y +ACD GRGAV FSVARGKV+EGIDF H GR VIM G+P+
Sbjct: 594 LLFIETNDALETSAALEKYVEACDSGRGAVLFSVARGKVSEGIDFSHHLGRCVIMLGIPY 653
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
YT S++L ARLEYLRDTF I+E DFLTFDA+R AQC+GR +RSK DYG+M+FADKR+S
Sbjct: 654 MYTESRVLRARLEYLRDTFGIRENDFLTFDAMRHTAQCMGRALRSKTDYGLMVFADKRFS 713
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
R+DKR KLP W+ +L A NLS D A +AR +L MAQP+ K +G
Sbjct: 714 RNDKRGKLPRWMQEYLEPASTNLSIDEAAQVARRWLTLMAQPFQKEHQLG 763
>gi|68471265|ref|XP_720409.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|77022390|ref|XP_888639.1| hypothetical protein CaO19_7119 [Candida albicans SC5314]
gi|46442275|gb|EAL01566.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|76573452|dbj|BAE44536.1| hypothetical protein [Candida albicans]
Length = 765
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/737 (49%), Positives = 514/737 (69%), Gaps = 7/737 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQYSYM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYSYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L ++ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEFRANELGEVEDFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIET--CEFFENYEKAASAAVLPPGVYTLQ 178
+ VD CR+ T ++ + E C F E ++PPGVY+
Sbjct: 120 ISKERKGVVVDEKCRRITNGQLKEKIEKGVPTEDSLCSFHEKLYDLEPHNLVPPGVYSFD 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + K++G CPYF R M+ F N+++YSY YLLDPK+A +S+E+ K+S+V+FDEAHN
Sbjct: 180 ALIKYCKEEGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSRELSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRG 296
IDNVCIE+LS+ + +TL+ A+R +++ + IE KA D+ +L+ EY +LVEGL A
Sbjct: 240 IDNVCIESLSLDLTDETLKKASRGANKLGEAIEDMKAQDSEKLQNEYEQLVEGLRQAEIA 299
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+++NP LP D+L EA+PGNIR+ EHF+ L+R ++YL+ R++ +V E P SF+
Sbjct: 300 RDQELFMANPVLPQDLLDEAIPGNIRKGEHFIAFLKRFIEYLKTRMKVLHVISETPTSFL 359
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
+ I++K LRFC ERL L+ TLE+T+ D+F ++ I FATLV TY GF +I+
Sbjct: 360 QHLKELTYIERKPLRFCSERLSLLVRTLEVTEIDDFNALKDIATFATLVSTYDSGFQLIL 419
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP++ +P+P+L +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YP++L F V+
Sbjct: 420 EPYETEGSTVPNPILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPKMLKFETVIQ 479
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E I PDG+V F
Sbjct: 480 ESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVF 539
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ II+ W G+L E+ +HKL+ +ET D ET+LAL+ YRKAC GRGAV S
Sbjct: 540 FPSYLYMESIISMWQSMGVLDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAVLLS 599
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD FQIKE DFL+FDA+R
Sbjct: 600 VARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKENDFLSFDAMR 659
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQC+GRV+R K DYG+M+ AD+R++R K+++LP WI L D+ NLSTDMAL A+
Sbjct: 660 HAAQCLGRVLRGKDDYGIMVLADRRFAR--KKNQLPKWIAQALNDSDTNLSTDMALATAK 717
Query: 717 EFLRKMAQPYDKAGSIG 733
+FLR +AQP + S G
Sbjct: 718 KFLRSLAQPTNPKDSEG 734
>gi|452981603|gb|EME81363.1| hypothetical protein MYCFIDRAFT_189512 [Pseudocercospora fijiensis
CIRAD86]
Length = 776
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/728 (50%), Positives = 513/728 (70%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F + D+ V FPY IYPEQY YM LK+ LD+ GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFYIGDLPVLFPYPRIYPEQYEYMCALKQTLDSGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y++ LG A +GL+SRKNLC++
Sbjct: 61 QHYPEH-RKLIYCSRTMSEIEKALAELKALMKYRSDQLGHAEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA++V+ +++ C + +N + ++PPGV+TL +
Sbjct: 120 VKQEKSGSVVDARCRSLTAAFVKEKKDRGEDVDVCIYHDNLDLLEPHNLIPPGVWTLDGM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+QQ CPYF AR M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEQQKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R + + +EI K TDA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKAARGAANLEREITTMKQTDADKLQNEYAKLVEGLREADAARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A++SNPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ +V E P SF+
Sbjct: 300 EGAFMSNPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHVISETPPSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATL TY GF +I+EP
Sbjct: 360 LKELTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLAATYDTGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+P+L +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++L F VV S
Sbjct: 420 YESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFECVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F R+DP RNYG LL+E + PDGIV FF
Sbjct: 480 YTMTLARKSFLPMIVTRGSDQGQISSGFQTRNDPANVRNYGNLLIEFSKLTPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +I+ W GIL + + KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESVISMWQTMGILDSVWKSKLILVETPDSQETSLALETYRTACSNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+T++IKE DFL+FDA+R
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHC 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ ADKR+++ KR++LP WI + L D+ N+S D A+ A++F
Sbjct: 660 AQCLGRVLRGKDDYGVMVMADKRFAK--KRNQLPKWINNQLMDSDTNMSVDQAVAAAKKF 717
Query: 719 LRKMAQPY 726
L++M+QP+
Sbjct: 718 LKQMSQPF 725
>gi|350629867|gb|EHA18240.1| DNA repair helicase, subunit of TFIIH [Aspergillus niger ATCC 1015]
Length = 811
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/766 (49%), Positives = 527/766 (68%), Gaps = 16/766 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L ++ + LG A+GL+SRKNLC++
Sbjct: 61 QHYPEH-RKLIYCSRTMSEIEKALAELKALMKFRAKELGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+TL L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMV----------QFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
+G++ CPYF AR M+ F NV++YSY YLLDPK+A +S+E+ K+ +
Sbjct: 180 LKYGEEHKQCPYFSARRMLLQAYSQIVQMPFCNVIIYSYHYLLDPKIAERVSRELSKDCI 239
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVE 290
VVFDEAHNIDNVCIE+LS+ + +L ATR + + ++I K +DA +L+ EY++LVE
Sbjct: 240 VVFDEAHNIDNVCIESLSIDLTEDSLRKATRGANNLERKINEMKTSDAEKLQNEYSKLVE 299
Query: 291 GL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
GL A + + ++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ +
Sbjct: 300 GLQAAEQAREEDQFISNPVLPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVMHTI 359
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY 408
E P SF+ + I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY
Sbjct: 360 SETPPSFLTHVKDLTYIERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVATY 419
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
+GF +I+EPF+ +P+PVL +C DA++A+KPVF+RF SV+ITSGTLSP+++YP++
Sbjct: 420 EKGFLLILEPFESEAATVPNPVLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKM 479
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSI 528
L F+ V+ S+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG L++E I
Sbjct: 480 LGFNAVMQESYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRI 539
Query: 529 VPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDC 588
PDG+V FF SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC
Sbjct: 540 TPDGVVVFFPSYLYMESIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCN 599
Query: 589 GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD 648
GRGA+ VARGKV+EGIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E D
Sbjct: 600 GRGALLLCVARGKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEFLRENYRIREND 659
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST 708
FL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLST
Sbjct: 660 FLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWINQAMLESETNLST 717
Query: 709 DMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINE 754
DMA A+ FLR MAQP+ G T S AD+E+ + E
Sbjct: 718 DMAAATAKNFLRTMAQPFKARDQEGIST-WSLADIERHREKQKLEE 762
>gi|256088634|ref|XP_002580433.1| DNA repair helicase rad3/xp-d [Schistosoma mansoni]
Length = 764
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/725 (50%), Positives = 519/725 (71%), Gaps = 4/725 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M+ELKR +DAKGH +LEMP+GTGKT++LLSLI +Y+ ++P K IYC+RTV E+EK +
Sbjct: 1 MIELKRTIDAKGHGVLEMPSGTGKTVSLLSLIVAYMKARPGIVEKFIYCSRTVPELEKVI 60
Query: 85 AELKLLHNY-QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
ELK+L Y T +L I LSSRKNLC+ V A + +VD+AC + TAS+VR
Sbjct: 61 EELKVLDKYYATETNEKGCGLLGIVLSSRKNLCIQRDVKQAGDGAAVDSACFRLTASFVR 120
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+PN+ C+++E ++ LP G+Y + D++ + K+ +CPYFL R+ + +AN
Sbjct: 121 KKHMTDPNVPYCKYYEEFDLHGRDNPLPTGIYNMADIKTYAKKHNYCPYFLTRYAISYAN 180
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+VVYSY YLLDPK+A ++S+E+ K SVVVFDEAHNIDNVCIE++S + R++LE T +L
Sbjct: 181 IVVYSYFYLLDPKIANVVSRELPKNSVVVFDEAHNIDNVCIESMSCLITRRSLEKCTTSL 240
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+ + Q + K ++ RL+ EY RLVEGL A + L+NPALP DIL+E++PG++
Sbjct: 241 NLLTQTVNEAKTNNSERLKEEYQRLVEGLRQAKLSKETDLVLANPALPDDILQESIPGSL 300
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM 381
R A+ FL LRR ++Y++ RL +V E PV+F+ +D+K L+FC ERL SL+
Sbjct: 301 RSADSFLSFLRRFLEYVKLRLRIAHVVHETPVAFLRDCLEKVCVDRKPLQFCAERLRSLL 360
Query: 382 LTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
TLE+ D F + +C+FATLV TYTRGF +IIEPFDER P I +PVL C DASL
Sbjct: 361 HTLELADYANFSSLTLLCNFATLVSTYTRGFCLIIEPFDERTPTIINPVLYFHCMDASLP 420
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP 501
++P+ RF SV+ITSGTLSP+++YPR+L+FHPV + SF M+L R+C+ PM++++G+DQ+P
Sbjct: 421 IRPIMSRFTSVIITSGTLSPLEMYPRILDFHPVNTVSFTMTLARNCVLPMIVSKGNDQVP 480
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
++TKF+ R D V RNYG LL ++ ++VPDGIV FF SY Y++ A+W + I+++I +
Sbjct: 481 MTTKFESRQDVAVIRNYGHLLAQLSAVVPDGIVAFFPSYHYLESTFASWYEQHIVEQIQR 540
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
+KL+F+ETQD ET+LAL Y +AC+ GRGAV SV RG+V+EGIDFD H GR VIMFGV
Sbjct: 541 NKLLFVETQDAEETSLALAAYHRACENGRGAVLLSVVRGRVSEGIDFDHHLGRCVIMFGV 600
Query: 622 PFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
P+ YT S+I ARL++LR+ + ++ +F+TFDA+R AAQC+GR IR K+DYG+MI ADKR
Sbjct: 601 PYVYTQSRIFKARLDFLREQYNVRPNEFITFDAMRHAAQCLGRAIRGKSDYGIMILADKR 660
Query: 682 YSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQA 741
Y+R DKR KLPGWI S L+DA +NLS + ++ +R FLR M QP++K +G LL++
Sbjct: 661 YARADKRFKLPGWIQSQLQDAFINLSIEESIQASRRFLRLMGQPFNKNDQLGL-ALLTRE 719
Query: 742 DLEKM 746
+ K+
Sbjct: 720 HINKL 724
>gi|190347854|gb|EDK40205.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/762 (48%), Positives = 526/762 (69%), Gaps = 17/762 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKTI+LLSL +Y
Sbjct: 54 MKFFIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQ 113
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ LG +GL+SRKNLC++
Sbjct: 114 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEYRAEELGYVEDFRGLGLTSRKNLCIHPT 172
Query: 121 VLAAENRDSVDAACRKRTASWVRA----------LAAENPNIET-CEFFENYEKAASAAV 169
+ + VD CR+ T ++ L A NP T C + EN S +
Sbjct: 173 ISKERKGNVVDEKCRRITNGQLKQKIESGAVSPDLQANNPEAYTLCNYHENMNDMDSHSY 232
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L + K++ CPYF R M+ F N+++YSY YLLDPK+A +SKE+ K+S
Sbjct: 233 VPNGVYSFDGLINYSKEKQICPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDS 292
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + TL+ ATR +++ + ++ KA D+ +L+ EY +LV
Sbjct: 293 IIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGANKLGEAVDEMKAQDSEKLQNEYEKLV 352
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A ++SNPALP D+L EA+PGNIR+AEHF+ L+R ++YL+ R++ +V
Sbjct: 353 EGLRDAEIARDEELFMSNPALPQDLLDEAIPGNIRKAEHFISFLKRFIEYLKTRMKVLHV 412
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P+SF+ + I++K LRFC ERL L+ TLE+++ ++F ++ I FATLV T
Sbjct: 413 ISETPLSFLQHLKDLTFIERKPLRFCSERLSLLVRTLELSEIEDFNALKDIATFATLVST 472
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y RGF +I+EPF+ +P+P+L +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YPR
Sbjct: 473 YDRGFQLILEPFETDGATVPNPILHFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPR 532
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+LNF V+ S+ M+L R PM++T+G+DQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 533 MLNFQTVIQESYTMTLARRSFLPMIVTKGADQVSISSQFEIRNDPSVVRNYGSLLIEFSK 592
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W G+L E+ +HKL+ +ET D T+LAL+ YRKAC
Sbjct: 593 ITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQVTSLALETYRKACS 652
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD +QI+E
Sbjct: 653 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDNYQIREN 712
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ R K+++LP WI L ++ NLS
Sbjct: 713 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFRR--KKNQLPKWIAQALYESDENLS 770
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
TDMAL A++FLR +AQP + G ++ LEK N+
Sbjct: 771 TDMALANAKKFLRSLAQPTNPKDQEG-VSVWDIHQLEKFQNE 811
>gi|385302835|gb|EIF46944.1| dna repair helicase rad3 [Dekkera bruxellensis AWRI1499]
Length = 803
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/730 (50%), Positives = 519/730 (71%), Gaps = 8/730 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY+YM ++K+ +D G+ +LEMP+GTGKTIALL+L +Y
Sbjct: 1 MKFFIDDLPILFPYPKIYPEQYAYMCDVKKCIDVGGNGVLEMPSGTGKTIALLALSVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+ + LG +GL+SRKNLC++
Sbjct: 61 MYYPEHR-KIIYCSRTMSEIEKALIELEXLMDYRAKELGHVENFRGLGLTSRKNLCLHPV 119
Query: 121 VLAAENRDSVDAACRKRTASWV--RALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V + VD CR+ T + + A E E C + E + A ++PPGVY+ Q
Sbjct: 120 VGKEKKGTVVDEMCRRLTNGQLGEKVRAGEANADELCSWHEKLYEKDPANLIPPGVYSFQ 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + KQ+G CPYF R M+ N+V+YSY Y++DPKVA +SK++ K+S+V+FDEAHN
Sbjct: 180 QLLDYCKQEGTCPYFTVRRMMPLCNIVIYSYHYIIDPKVAVRVSKDLSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIEALS+ + L+ ATR + +++++++ K D+ RL+ EY +LV GL L
Sbjct: 240 IDNVCIEALSMDIDEDMLQRATRGANDLSRKVDQVKKVDSSRLQDEYEKLVAGLRESDML 299
Query: 299 PNA---WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ ++ NP LPSD+L+EA+PG+IRRAEHF+ ++R ++YL+ R++ +V E P SF
Sbjct: 300 KESEEPFMENPILPSDVLQEAIPGSIRRAEHFISFMKRFIEYLKTRMKVLHVISETPTSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+ D +EF ++ I FATLV TY GF +I
Sbjct: 360 LQHLKQLTYIDRKPLRFCSERLSMLVRTLEVXDIEEFTSLKDIATFATLVSTYENGFMLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+EP++ +P+P+L+ +C DAS+A+KPVFDRF SVVITSGT+SP+D+YPR+LNF VV
Sbjct: 420 LEPYETENATVPNPILRFTCMDASIAIKPVFDRFPSVVITSGTISPLDMYPRMLNFDTVV 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
S+ M+L R P+++T+GSDQ+ +S++F++R+DP V RNYG LL+E V I PDG+V
Sbjct: 480 QESYAMTLDRRAFLPLIVTKGSDQVAISSRFEIRNDPSVVRNYGTLLMEFVKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W GIL E+ ++KL+ +ET D ET LAL+ YRKAC GRGAV
Sbjct: 540 FFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETALALETYRKACLNGRGAVLL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD +YGR V+M G+PFQYT S+IL ARLE+LRD +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHYYGRTVLMIGIPFQYTESRILKARLEFLRDNYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+ R KRS+LP WI L DA++NLSTDMA+ A
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFLR--KRSQLPKWIAQGLLDANVNLSTDMAIAAA 717
Query: 716 REFLRKMAQP 725
++FLR AQP
Sbjct: 718 KKFLRTAAQP 727
>gi|326475278|gb|EGD99287.1| DNA repair helicase RAD3 [Trichophyton tonsurans CBS 112818]
Length = 789
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/738 (49%), Positives = 520/738 (70%), Gaps = 5/738 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKTI LL+LI +Y
Sbjct: 1 MEFFIDDLPILFPYPRIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L+EL+ L Y+++ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALSELRALMKYRSQKLGVVEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +++ + ++E C + EN + + ++PPGV+TL L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFIKEKKEKGEDVELCIYHENLDLLEPSNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ + NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 180 LKYGEQHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIE+LS+ + +L A+R + + ++I+ K++DA +L++EY +LVEGL
Sbjct: 240 NVCIESLSIDLTEDSLRKASRGANNLERKIDDMKSSDADKLQSEYQKLVEGLREADEARE 299
Query: 301 A--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NP LP D+LKE+VPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 300 EEQLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F + S
Sbjct: 420 FESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFDAALQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +L+E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDSVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDALR A
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDALRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWISQAMLESETNLSTDMAVATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKT 736
L+ MAQP+ G T
Sbjct: 718 LKSMAQPFKAKDQEGIST 735
>gi|146415208|ref|XP_001483574.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/762 (48%), Positives = 526/762 (69%), Gaps = 17/762 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKTI+LLSL +Y
Sbjct: 54 MKFFIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQ 113
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ LG +GL+SRKNLC++
Sbjct: 114 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEYRAEELGYVEDFRGLGLTSRKNLCIHPT 172
Query: 121 VLAAENRDSVDAACRKRTASWVRA----------LAAENPNIET-CEFFENYEKAASAAV 169
+ + VD CR+ T ++ L A NP T C + EN S +
Sbjct: 173 ISKERKGNVVDEKCRRITNGQLKQKIELGAVSPDLQANNPEAYTLCNYHENMNDMDSHSY 232
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L + K++ CPYF R M+ F N+++YSY YLLDPK+A +SKE+ K+S
Sbjct: 233 VPNGVYSFDGLINYSKEKQICPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDS 292
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + TL+ ATR +++ + ++ KA D+ +L+ EY +LV
Sbjct: 293 IIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGANKLGEAVDEMKAQDSEKLQNEYEKLV 352
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A ++SNPALP D+L EA+PGNIR+AEHF+ L+R ++YL+ R++ +V
Sbjct: 353 EGLRDAEIARDEELFMSNPALPQDLLDEAIPGNIRKAEHFISFLKRFIEYLKTRMKVLHV 412
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P+SF+ + I++K LRFC ERL L+ TLE+++ ++F ++ I FATLV T
Sbjct: 413 ISETPLSFLQHLKDLTFIERKPLRFCSERLSLLVRTLELSEIEDFNALKDIATFATLVST 472
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y RGF +I+EPF+ +P+P+L +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YPR
Sbjct: 473 YDRGFQLILEPFETDGATVPNPILHFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPR 532
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+LNF V+ S+ M+L R PM++T+G+DQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 533 MLNFQTVIQESYTMTLARRSFLPMIVTKGADQVSISSQFEIRNDPSVVRNYGSLLIEFSK 592
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W G+L E+ +HKL+ +ET D T+LAL+ YRKAC
Sbjct: 593 ITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQVTSLALETYRKACS 652
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD +QI+E
Sbjct: 653 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDNYQIREN 712
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ R K+++LP WI L ++ NLS
Sbjct: 713 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFRR--KKNQLPKWIAQALYESDENLS 770
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
TDMAL A++FLR +AQP + G ++ LEK N+
Sbjct: 771 TDMALANAKKFLRSLAQPTNPKDQEG-VSVWDIHQLEKFQNE 811
>gi|327294313|ref|XP_003231852.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
gi|326465797|gb|EGD91250.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
Length = 790
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/738 (49%), Positives = 519/738 (70%), Gaps = 5/738 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKTI LL+LI +Y
Sbjct: 1 MEFFIDDLPILFPYPRIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L+EL+ L Y+++ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALSELRALMKYRSQKLGVVEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +++ + ++E C + EN + + ++PPGV+TL L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFIKEKKEKGEDVELCIYHENLDLLEPSNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ + NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 180 LKYGEQHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIE+LS+ + +L A+R + + ++I+ K++DA RL+ EY +LVEGL
Sbjct: 240 NVCIESLSIDLTEDSLRKASRGANNLERKIDDMKSSDADRLQNEYQKLVEGLREADEARE 299
Query: 301 A--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NP LP D+LKE+VPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 300 EEQLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F + S
Sbjct: 420 FESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFDAALQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +L+E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDSVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDALR A
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDALRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWISQAMLESETNLSTDMAVATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKT 736
L+ MAQP+ G T
Sbjct: 718 LKSMAQPFKAKDQEGIST 735
>gi|315056317|ref|XP_003177533.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
gi|311339379|gb|EFQ98581.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
Length = 790
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/738 (49%), Positives = 517/738 (70%), Gaps = 5/738 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKTI LL+LI +Y
Sbjct: 1 MEFLIDDLPILFPYPRIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L EL+ L Y+++ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALNELRALMKYRSQKLGVVEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +++ + ++E C + EN + + ++PPGV+TL L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFIKEKKEKGEDVELCIYHENLDLLEPSNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ + NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 180 IKYGEQHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIE+LS+ + +L A R S + ++I+ K++DA +L+ EY +LVEGL
Sbjct: 240 NVCIESLSIDLTEDSLRKAGRGASNLERKIDEMKSSDADKLQNEYQKLVEGLREADEARE 299
Query: 301 A--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NP LP D+LKE+VPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 300 EEQLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEKGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F + S
Sbjct: 420 FESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFDAALQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +L+E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESIISMWQGMGILDSVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDALR A
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDALRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWISQAMLESETNLSTDMAVATAKSF 717
Query: 719 LRKMAQPYDKAGSIGRKT 736
L+ MAQP+ G T
Sbjct: 718 LKSMAQPFKAKDQEGIST 735
>gi|126140148|ref|XP_001386596.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
gi|126093880|gb|ABN68567.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
Length = 793
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/746 (49%), Positives = 519/746 (69%), Gaps = 16/746 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L +++ LG + +GL+SRKNLCV+
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEFRSTELGYVEEFRGLGLTSRKNLCVHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAE---NPNIET--------CEFFENYEKAASAAV 169
+ + VD CR+ T ++ A+ P+ E C+ EN +
Sbjct: 120 ISQERKGNVVDEKCRRITNGQLKERIAKGLVTPDQEVNHAEANTLCDMHENMNDMDQHNL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L + KQ+G CPYF R M+ F N+++YSY YLLDPK+A +SKE+ K+S
Sbjct: 180 IPAGVYSFDALIKYCKQEGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + TL+ ATR +++ ++ KA D+ +L+ EY +LV
Sbjct: 240 IIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGANKLGDAVDEMKAHDSEKLQNEYEKLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A ++SNP LP D+L EA+PGNIR+AEHF+ L+R ++YL+ R++ +V
Sbjct: 300 EGLRQAEIARDEELFMSNPTLPQDLLDEAIPGNIRKAEHFISFLKRFIEYLKTRMKVLHV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P+SF+ + ID+K LRFC ERL L+ TLE+++ ++F ++ I FATLV T
Sbjct: 360 ISETPISFLQHLKELTFIDRKPLRFCSERLSLLVRTLELSEIEDFHALKDIATFATLVST 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF +I+EPF+ +P+P+L C DAS+A+KPVF+RF SV+ITSGT+SP+D+YP+
Sbjct: 420 YDTGFQLILEPFESEGSTVPNPILHFICLDASIAIKPVFERFSSVIITSGTISPLDMYPK 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
++NF V+ S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 480 MMNFQTVIQESYTMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFSK 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W G+L E+ ++KL+ +ET D ET+LAL+ YRKAC
Sbjct: 540 ITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKYKLILVETPDAQETSLALETYRKACS 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD FQI+E
Sbjct: 600 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIREN 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+S+ K+++LP WI L D+ NLS
Sbjct: 660 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSK--KKNQLPKWIAQALNDSDTNLS 717
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIG 733
TDMAL AR+FLR +AQP + G
Sbjct: 718 TDMALATARKFLRSLAQPANPKDQEG 743
>gi|366990349|ref|XP_003674942.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS 4309]
gi|342300806|emb|CCC68570.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS 4309]
Length = 774
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/738 (49%), Positives = 516/738 (69%), Gaps = 8/738 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM +LK+ LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYHYMCDLKKTLDAGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+ R LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRARELGHRENFRGLGLTSRKNLCLHPV 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNI--ETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + ++PN E CE+ EN K LP GV++ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGVAKRKLEQDPNADAELCEYHENLYKMEVGDYLPNGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLIKYCEERTICPYFVVRRMISMCNIMIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L AT+ + + + I+ + DA +L+ EY++LVEGL L
Sbjct: 240 IDNVCIESLSLDLTNDVLRRATKGANALEERIDDVRKVDAQKLQDEYDKLVEGLHTADIL 299
Query: 299 P---NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
P ++ P L D+LKEA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 PVQEEPFVETPVLSKDLLKEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+T+ ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIDRKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEDGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFETVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KR++LP WI L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRTQLPKWIAQGLSDADLNLSTDMAISNT 717
Query: 716 REFLRKMAQPYDKAGSIG 733
++FLR MAQP D G
Sbjct: 718 KQFLRTMAQPDDPKDQEG 735
>gi|365983344|ref|XP_003668505.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS 421]
gi|343767272|emb|CCD23262.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/754 (49%), Positives = 523/754 (69%), Gaps = 9/754 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM +LK+ LDA G+ +LEMP+GTGKT++LLSL SY
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYHYMCDLKKTLDAGGNSILEMPSGTGKTVSLLSLTISYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L Y+ + LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMAYRAKELGHVETFRGLGLTSRKNLCLHPV 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNI--ETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + ++PN E CE+ EN K LP GV++ +
Sbjct: 120 VSKERKGSVVDEKCRRMTNGIAKRKLEQDPNADAELCEYHENLYKMEVDEYLPNGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLIKYCEERTICPYFVVRRMISMCNIMIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L AT+ + ++I+ + D+ RL+ EY++LVEGL +
Sbjct: 240 IDNVCIESLSLDLTNDVLRRATKGAHALEEKIDDVRKIDSQRLQDEYDKLVEGLHSSDIV 299
Query: 299 PNA---WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
P ++ P L D+LKEA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 PEQEEPFVETPVLSKDLLKEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+ D ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIDRKPLRFCSERLSLLVRTLEVNDVEDFNSLKDIATFATLISTYEDGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF++F SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLNFETVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYSMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KR++LP WI L DA LNLSTDMA+ A
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRTQLPKWIAQGLSDADLNLSTDMAISNA 717
Query: 716 REFLRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
++FLR MAQP D G ++ S DL K N+
Sbjct: 718 KQFLRTMAQPTDPKDQEG-VSVWSFEDLTKHQNE 750
>gi|367008340|ref|XP_003678670.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
gi|359746327|emb|CCE89459.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
Length = 775
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/738 (49%), Positives = 518/738 (70%), Gaps = 8/738 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++K+ LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYKYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L PE+ K+IYC+RT+ E+EK L EL+ L +Y++R LG +GL+SRKNLC++
Sbjct: 61 LHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRSRELGVHEDFRGLGLTSRKNLCLHPI 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPN--IETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + +P+ +E CE+ EN LP GVY+ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKQKLETDPDSKVELCEYHENLYNIEVEDYLPKGVYSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S+EM K+ +V+FDEAHN
Sbjct: 180 RLIKYCEERKLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSREMSKDGIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L+ AT+ + + IE + DA +L+ EY++LV+GL L
Sbjct: 240 IDNVCIESLSLDLTNDVLKRATKGANALENRIEEVRRVDAQKLQDEYDKLVQGLHTAEIL 299
Query: 299 P---NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ L P L D+L EA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 EPEEESALETPVLSQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+++ ++F+ ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIDRKPLRFCSERLSLLVRTLEVSEIEDFMALKDIATFATLISTYETGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF+ V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFNTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFSKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIISMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KR++LP WI L DA LNLSTDMA+ A
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRNQLPKWISQGLSDADLNLSTDMAIANA 717
Query: 716 REFLRKMAQPYDKAGSIG 733
++FLR MAQP D G
Sbjct: 718 KQFLRTMAQPTDPKDQEG 735
>gi|398396458|ref|XP_003851687.1| DNA repair helicase [Zymoseptoria tritici IPO323]
gi|339471567|gb|EGP86663.1| hypothetical protein MYCGRDRAFT_43883 [Zymoseptoria tritici IPO323]
Length = 801
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/728 (50%), Positives = 514/728 (70%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +ED+ V FPY IYPEQY+YM +LKR LD+ GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIEDLPVLFPYPRIYPEQYAYMCDLKRTLDSGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y+ LG +GL+SRKNLC++
Sbjct: 61 QFYPEH-RKLIYCSRTMSEIEKALAELKALMKYRADQLGEVEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VD+ CR TA +V+ +++ C + +N + ++PPGV+TL +
Sbjct: 120 VKREKSGSVVDSRCRSLTAGFVKEKKERGEDVDLCIYHDNLDLLEPHNLIPPGVWTLDGM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+QQ CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEQQKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R S + ++I K TDA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKAARGASNLERKITEMKDTDAEKLQNEYAKLVEGLREADEARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A++SNPALP D+LKEA+PGNIRRAEHF L+R ++YL+ R++ +V E P SF+
Sbjct: 300 EGAFMSNPALPDDLLKEAIPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISETPPSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+++ +++ +Q + FATLV TY GF +I+EP
Sbjct: 360 LKELTFIEKKPLRFCAERLTSLVRTLELSNIEDYQPLQEVATFATLVATYDTGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+P+L +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++L F VV S
Sbjct: 420 YESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFTAVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F RSDPG RNYG L++E + PDGIV FF
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQGQMSSGFQTRSDPGNIRNYGALIIEFSKLTPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +I+ W GIL ++ + KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESVISMWQGMGILDQVWKSKLILVETPDSQETSLALETYRTACSNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHC 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ ADKR+++ KR++LP WI S + ++ N+S D A+ A++F
Sbjct: 660 AQCLGRVLRGKDDYGVMVMADKRFAK--KRTQLPKWIGSAMMESDANMSVDQAVAAAKKF 717
Query: 719 LRKMAQPY 726
L+ M++P+
Sbjct: 718 LKNMSKPF 725
>gi|190405726|gb|EDV08993.1| DNA repair helicase RAD3 [Saccharomyces cerevisiae RM11-1a]
gi|207345787|gb|EDZ72494.1| YER171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 780
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/753 (48%), Positives = 523/753 (69%), Gaps = 9/753 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+T+ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + E+P N+E CE+ EN LP GV++ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL---ALR 295
IDNVCIE+LS+ + L ATR + +++ I + D+ +L+ EY +LV+GL +
Sbjct: 240 IDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADIL 299
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ ++ P LP D+L EA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 TDQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + I++K LRFC ERL L+ TLE+T+ ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE++R+ ++I+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KRS+LP WI L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRSQLPKWIAQGLSDADLNLSTDMAISNT 717
Query: 716 REFLRKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
++FLR MAQP D G ++ S DL K N
Sbjct: 718 KQFLRTMAQPTDPKDQEG-VSVWSYEDLIKHQN 749
>gi|398365073|ref|NP_011098.3| Rad3p [Saccharomyces cerevisiae S288c]
gi|131812|sp|P06839.1|RAD3_YEAST RecName: Full=DNA repair helicase RAD3; AltName: Full=General
transcription and DNA repair factor IIH subunit RAD3;
Short=TFIIH subunit RAD3
gi|4269|emb|CAA26215.1| unnamed protein product [Saccharomyces cerevisiae]
gi|172331|gb|AAA34943.1| RAD3 protein [Saccharomyces cerevisiae]
gi|603412|gb|AAB64698.1| Rad3p: DNA repair helicase component of transcription factor b
[Saccharomyces cerevisiae]
gi|151944888|gb|EDN63147.1| transcription initiation factor TFIIH subunit [Saccharomyces
cerevisiae YJM789]
gi|256271309|gb|EEU06379.1| Rad3p [Saccharomyces cerevisiae JAY291]
gi|259146100|emb|CAY79360.1| Rad3p [Saccharomyces cerevisiae EC1118]
gi|285811805|tpg|DAA07833.1| TPA: Rad3p [Saccharomyces cerevisiae S288c]
gi|323305313|gb|EGA59060.1| Rad3p [Saccharomyces cerevisiae FostersB]
gi|323355348|gb|EGA87173.1| Rad3p [Saccharomyces cerevisiae VL3]
gi|349577832|dbj|GAA23000.1| K7_Rad3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299876|gb|EIW10968.1| Rad3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 778
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/753 (48%), Positives = 523/753 (69%), Gaps = 9/753 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+T+ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + E+P N+E CE+ EN LP GV++ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL---ALR 295
IDNVCIE+LS+ + L ATR + +++ I + D+ +L+ EY +LV+GL +
Sbjct: 240 IDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADIL 299
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ ++ P LP D+L EA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 TDQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + I++K LRFC ERL L+ TLE+T+ ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE++R+ ++I+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KRS+LP WI L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRSQLPKWIAQGLSDADLNLSTDMAISNT 717
Query: 716 REFLRKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
++FLR MAQP D G ++ S DL K N
Sbjct: 718 KQFLRTMAQPTDPKDQEG-VSVWSYEDLIKHQN 749
>gi|449299736|gb|EMC95749.1| hypothetical protein BAUCODRAFT_502978 [Baudoinia compniacensis
UAMH 10762]
Length = 803
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/728 (50%), Positives = 513/728 (70%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MRFMIDDLPVLFPYPRIYPEQYAYMSDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y+ LG +GL+SRKNLC++
Sbjct: 61 QFYPEH-RKLIYCSRTMSEIEKALAELKALMKYRADQLGEVEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ +++ C + +N + ++PPGV+TL +
Sbjct: 120 VKREKSGSVVDARCRSLTAGFVKEKKERGEDVDLCIYHDNLDLLEPHNLIPPGVWTLDGM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEQHKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + ++L A R + +I++ K TDA +L+ EY +LVEGL A +
Sbjct: 240 NVCIESLSIDLTEESLRRAGRGAQNLEDKIKQMKETDAEKLQNEYAKLVEGLREADQARE 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A++SNPALP D+LKEA+PGNIRRAEHF L+R ++YL+ R++ +V E P SF+A
Sbjct: 300 EEAFMSNPALPDDLLKEAIPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY GF +I+EP
Sbjct: 360 LKELTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVASFATLVATYETGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+P L +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++L F VV S
Sbjct: 420 YESDTATVPNPELHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFSTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F R DP V RNYG LL+E + PDGIV FF
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQSQMSTGFQTRDDPQVVRNYGNLLIEFSKLTPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +I++W GIL + + KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMERVISSWQSMGILDSVWKSKLILVETPDSQETSLALETYRTACSNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHC 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ ADKR+++ KR++LP WI S L ++ +S D A+ A++F
Sbjct: 660 AQCLGRVLRGKDDYGIMVMADKRFAK--KRTQLPKWISSALLESDSQMSVDQAVASAKKF 717
Query: 719 LRKMAQPY 726
L+ M++P+
Sbjct: 718 LKVMSKPF 725
>gi|50306065|ref|XP_452994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642127|emb|CAH01845.1| KLLA0C17776p [Kluyveromyces lactis]
Length = 778
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/764 (47%), Positives = 529/764 (69%), Gaps = 14/764 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++K+ LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+++ LG +GL+SRKNLC++ R
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELESLMDYRSKELGFVEDFRGLGLTSRKNLCLHPR 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V + VD CR+ T R ENP N+E C++ EN A LPPGV++ +
Sbjct: 120 VSKERKGNVVDEKCRRMTNGQARKKKEENPDANVELCDYHENMYNYDVADYLPPGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L F +++ CPYF R M+ N+++YSY YLLDPK+A +SKE+ K+++V+FDEAHN
Sbjct: 180 RLIRFCEEKRMCPYFTVRRMISMCNIIIYSYHYLLDPKIAERVSKEVSKDAIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA---LR 295
IDNVCIE+LS+ + + L+ AT+ + +++++E K D+ +L+ EY +LV GL +
Sbjct: 240 IDNVCIESLSLDLTKDLLKKATKGANALDRKVEEMKKVDSQKLQDEYEKLVHGLRASDIL 299
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ P L +DILKEA+PGNIRRA HF+ L+R ++YL+ R++ +V E P SF
Sbjct: 300 EPEEEPLVETPVLSNDILKEAIPGNIRRATHFISFLKRFIEYLKTRMKVLHVISETPNSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + I++K LRFC ERL L+ TLE+ + +EF ++ I FATL+ TY GF +I
Sbjct: 360 LLHLKQLTFIERKPLRFCSERLSLLVRTLEVEEVEEFNALKDIATFATLISTYEDGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KP+F+RF SV+ITSGT+SP+D+YP++LNF V+
Sbjct: 420 IEPYEIENAAVPNPIVRFTCLDASIAIKPIFERFSSVIITSGTISPLDMYPKMLNFETVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM+LT+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QQSYSMTLAKKSFLPMILTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGLVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W GIL E+ ++KL+ +ET D ET LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETALALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R++R K+S+LP WI L DA +NLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFAR--KKSQLPKWIAQGLSDADMNLSTDMAIANT 717
Query: 716 REFLRKMAQPYDKAGSIG------RKTLLSQADLEKMTNDGSIN 753
++FLR MAQP D G + L Q ++K ++G ++
Sbjct: 718 KQFLRTMAQPTDPKDQEGVSVWSHAQLLAHQESVKKKQHNGFVD 761
>gi|451850440|gb|EMD63742.1| hypothetical protein COCSADRAFT_37505 [Cochliobolus sativus ND90Pr]
Length = 798
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/746 (50%), Positives = 523/746 (70%), Gaps = 6/746 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++ + V FPY +YPEQY+YM +LKR LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFYIDSLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E+EK LAELK L Y+T LG + +GL+SRKNLC++
Sbjct: 61 QHYPEKR-KLIYCSRTMSEIEKALAELKALMKYRTTELGYEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+T +
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLIPPGVWTFDGI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+QQ CPYF AR M+ + NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LKYGEQQKQCPYFTARRMMPYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIE+LS+ + L AT+ ++ ++++I K++DA +L+ EY +LVEGL N
Sbjct: 240 NVCIESLSIDLTEDVLRKATKGVNNLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARN 299
Query: 301 --AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A+++NPALP D+L EAVPGNIRRAEHF+ L+R ++YL+ R++ NV + P F+
Sbjct: 300 EEAFMANPALPDDLLTEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY GF +IIEP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLIIEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL L+C DA++A+KPVF+RF SV++TSGT+SP+D+YPR+LNF+ VV S
Sbjct: 420 FESATATVPNPVLHLTCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLNFNTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+LTR PM++ RG+DQ V+++F+ R+D V RN+G LL+E + PDG+V FF
Sbjct: 480 FTMTLTRKSFLPMIVDRGNDQNQVTSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W IL + ++KL+ +ET D ET LAL+ +R AC+ GRGAV VA
Sbjct: 540 SYLYMESIISAWQGMEILDTVWKYKLILVETPDAQETALALETFRTACNNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVP+QYT S+IL ARLE+LR+T++IKE DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCMGVPYQYTESRILKARLEFLRETYRIKEADFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRVIR K DYG+M+ ADKR+++ K+++LP WI L + LS D A+ +A+ F
Sbjct: 660 AQCLGRVIRGKDDYGIMVLADKRFNK--KQTQLPKWIQQGLDAKNTKLSIDQAVGMAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
L++M+ P+ +A G + S DLE
Sbjct: 718 LKEMSVPWSRAEQEGHSS-WSLEDLE 742
>gi|452000477|gb|EMD92938.1| hypothetical protein COCHEDRAFT_1133207 [Cochliobolus
heterostrophus C5]
Length = 799
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/746 (50%), Positives = 523/746 (70%), Gaps = 6/746 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++ + V FPY +YPEQY+YM +LKR LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFYIDSLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E+EK LAELK L Y+T LG + +GL+SRKNLC++
Sbjct: 61 QHYPEKR-KLIYCSRTMSEIEKALAELKALMKYRTTELGYEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + EN + ++PPGV+T +
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCVYHENLDLLEPHNLIPPGVWTFDGI 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+QQ CPYF AR M+ + NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LKYGEQQKQCPYFTARRMMPYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIE+LS+ + L AT+ ++ ++++I K++DA +L+ EY +LVEGL N
Sbjct: 240 NVCIESLSIDLTEDVLRKATKGVNNLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARN 299
Query: 301 --AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A+++NPALP D+L EAVPGNIRRAEHF+ L+R ++YL+ R++ NV + P F+
Sbjct: 300 EEAFMANPALPDDLLTEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY GF +IIEP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLIIEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL L+C DA++A+KPVF+RF SV++TSGT+SP+D+YPR+LNF+ VV S
Sbjct: 420 FESATATVPNPVLHLTCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLNFNTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+LTR PM++ RG+DQ V+++F+ R+D V RN+G LL+E + PDG+V FF
Sbjct: 480 FTMTLTRKSFLPMIVDRGNDQNQVTSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W IL + ++KL+ +ET D ET LAL+ +R AC+ GRGAV VA
Sbjct: 540 SYLYMESIISAWQGMEILDTVWKYKLILVETPDAQETALALETFRTACNNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVP+QYT S+IL ARLE+LR+T++IKE DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCMGVPYQYTESRILKARLEFLRETYRIKEADFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRVIR K DYG+M+ ADKR+++ K+++LP WI L + LS D A+ +A+ F
Sbjct: 660 AQCLGRVIRGKDDYGIMVLADKRFNK--KQTQLPKWIQQGLDAKNTKLSIDQAVGMAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
L++M+ P+ +A G + S DLE
Sbjct: 718 LKEMSVPWSRAEQEGHSS-WSLEDLE 742
>gi|430813060|emb|CCJ29560.1| unnamed protein product [Pneumocystis jirovecii]
Length = 774
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/750 (49%), Positives = 522/750 (69%), Gaps = 21/750 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM LK+ LDA GHC+LEMP+GTGKT++LLSLI SY
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCHLKKTLDAGGHCVLEMPSGTGKTVSLLSLIISYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
E KL+YC+RT+ E+EK L ELK L ++ + +K A+GL+SRKNLC++
Sbjct: 61 -KVFEQHRKLVYCSRTMSEIEKILVELKNLIEFRKKISEENSKFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+ + + VDA CR TAS+VR + C ++EN ++P GV+T DL
Sbjct: 120 IKHEKKGNIVDARCRGLTASFVREKKKAGEKVNLCLYYENLNFLDFCDLIPYGVFTFTDL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF+AR M+ F NVVVYSY YLLDPK++ IS+E+ K+ +VVFDEAHNID
Sbjct: 180 IEYGEKNQQCPYFIARRMIPFCNVVVYSYHYLLDPKISEFISRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL----ALRG 296
NVCIE+LSV + +L+ A+ +++ + +I K +A +L+ EY +LVEGL ++
Sbjct: 240 NVCIESLSVDITEDSLKRASHSINSLETKIANMKKNNAEKLQMEYRKLVEGLREIEKIKE 299
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
N + +++N L D+LKEA+PGNIR+AEHF+ L+R V+Y++ R++ +V E P+SF+
Sbjct: 300 N--DIFITNSILSDDLLKEAIPGNIRKAEHFVAFLKRFVEYMKTRMKVLHVIAETPLSFL 357
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
+ I+ K LRFC ERL+SL+ TLE++D +++ ++Q I DFATLV TY +GF II+
Sbjct: 358 QHLKELTYIESKPLRFCAERLNSLIRTLELSDIEDYQYLQEITDFATLVSTYEKGFIIIL 417
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPF+ +P+PV +C DAS+A+KP+F +F+SV+ITSGT+SP+D+YP++L F+ V+
Sbjct: 418 EPFETDTATVPNPVFHFTCLDASIAIKPIFAKFKSVIITSGTISPLDMYPKILQFNAVIQ 477
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
S+ +SL R+ PM++TRGS+Q+ +S+KF++R DP V RNYG +L+E I PDG+V F
Sbjct: 478 ESYNISLARNSFLPMIITRGSNQVAISSKFEVRDDPSVVRNYGDILLEFSKITPDGLVAF 537
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ I W ++KL+ +ET D ET LAL YR ACD GRGA+
Sbjct: 538 FPSYIYMESINEIW----------KYKLILVETPDSQETVLALKTYRTACDNGRGAILLC 587
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGK++EGIDFD HYGR VIMFG+P+QYT S+IL ARLE+LRD + IKE DFLTFDA+R
Sbjct: 588 VARGKISEGIDFDHHYGRTVIMFGIPYQYTKSRILKARLEFLRDMYHIKENDFLTFDAMR 647
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQC+GRV+R K DYG+M+ AD+R+SR DKR+KLP WI ++ NLSTDM++ A
Sbjct: 648 HAAQCLGRVLRGKDDYGIMVLADRRFSRTDKRNKLPKWIQQYITSGTSNLSTDMSIAFAE 707
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
+FL+ MAQP++ G +S D+EK+
Sbjct: 708 KFLKAMAQPFNIKDQEG----ISWWDIEKL 733
>gi|365760988|gb|EHN02666.1| Rad3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 775
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/753 (48%), Positives = 522/753 (69%), Gaps = 9/753 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++KR LD G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYKYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+T+ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + E+P N+E CE+ EN LP GV++ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYDIEVEDYLPKGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL---ALR 295
IDNVCIE+LS+ + L ATR + +++ I + D+ +L+ EY +LV+GL +
Sbjct: 240 IDNVCIESLSLDLTTDALRRATRGANALDERITEVRKVDSQKLQDEYEKLVQGLHSADIL 299
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ ++ P LP D+LKEA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 TDQEEPFVETPVLPLDLLKEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + I++K LRFC ERL L+ TLE+ + ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIERKPLRFCSERLSLLVRTLEVAEVEDFNALKDIATFATLISTYEEGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF++F SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLNFKTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE++R+ ++I+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KRS+LP WI L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRSQLPKWIAQGLSDADLNLSTDMAISST 717
Query: 716 REFLRKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
++FLR MAQP D G ++ S DL K N
Sbjct: 718 KQFLRTMAQPTDPKDQEG-VSVWSYDDLIKHQN 749
>gi|255731468|ref|XP_002550658.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
gi|240131667|gb|EER31226.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
Length = 781
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/746 (48%), Positives = 515/746 (69%), Gaps = 16/746 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEYRANELGEVEDFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAE----------NPNIET-CEFFENYEKAASAAV 169
+ VD CR+ T +++ + NP + C + E +
Sbjct: 120 ISKERKGVVVDEKCRRITNGQLKSKIEKGIVTEEDQLLNPETNSLCSYHEKLYDYEPHNL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+PPGVY+ L + K +G CPYF R M+ F N+++YSY YLLDPK+A +SKE+ K+S
Sbjct: 180 IPPGVYSFDALLRYCKDEGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSKELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + TL+ ATR +++ + IE K+ D+ +L+ EY +LV
Sbjct: 240 IIIFDEAHNIDNVCIESLSLDLTEDTLKRATRGANKLGEAIEEMKSQDSEKLQNEYEQLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A +++NP LP D+L EA+PGNIR+ EHF+ L+R V+YL+ R++ +V
Sbjct: 300 EGLRQAEIARDQELFMANPVLPQDLLDEAIPGNIRKGEHFIAFLKRFVEYLKTRMKVLHV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P SF+ + I++K LRFC ERL L+ TLE+++ ++F ++ I FATLV T
Sbjct: 360 ISETPTSFLQHLKDLTYIERKPLRFCSERLSLLVRTLELSEVEDFNALKDIATFATLVST 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF +I+EP++ +P+P+L +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YP+
Sbjct: 420 YDTGFQLILEPYETEGSTVPNPILHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPK 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
++NF V+ +S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LLVE
Sbjct: 480 MMNFQTVIQQSYSMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLVEFAK 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W + G+L E+ +HKL+ +ET D ET+LAL+ YRKAC
Sbjct: 540 ITPDGMVVFFPSYLYMESIISMWQNMGVLDEVWKHKLILVETPDAQETSLALETYRKACS 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD F IKE
Sbjct: 600 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFSIKEN 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+SR K+++LP WI L D+ NLS
Sbjct: 660 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSR--KKNQLPKWIAQALNDSDTNLS 717
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIG 733
TDMAL ++FLR +AQP + G
Sbjct: 718 TDMALATGKKFLRSLAQPSNPKDQEG 743
>gi|401625969|gb|EJS43941.1| rad3p [Saccharomyces arboricola H-6]
Length = 777
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/753 (48%), Positives = 520/753 (69%), Gaps = 9/753 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++KR LD G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+T+ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPE 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAE--NPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + E N N+E CE+ EN LP GV++ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDSNANVELCEYHENLYNIEVEDYLPKGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+S+V+FDEAHN
Sbjct: 180 KLLRYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL---ALR 295
IDNVCIE+LS+ + L ATR + +++ I + D+ +L+ EY +LV+GL +
Sbjct: 240 IDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADIL 299
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
++ P LP D+L EA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 TEQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + I++K LRFC ERL L+ TLE+ + ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIERKPLRFCSERLSLLVRTLEVAEVEDFTALKDIATFATLISTYEEGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE++R+ ++I+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KRS+LP WI L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KRSQLPKWIAQGLSDADLNLSTDMAISNT 717
Query: 716 REFLRKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
++FLR MAQP D G ++ S DL K N
Sbjct: 718 KQFLRTMAQPTDPKDQEG-VSVWSYDDLIKHQN 749
>gi|396473579|ref|XP_003839371.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
gi|312215940|emb|CBX95892.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
Length = 792
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/746 (49%), Positives = 521/746 (69%), Gaps = 6/746 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++ + V FPY +YPEQY+YM +LKR LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDTLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E+EK LAELK L Y+T+ LG + +GL+SRKNLC++
Sbjct: 61 QHYPEKR-KLIYCSRTMSEIEKALAELKALMKYRTQELGYEEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ ++E C + +N + ++PPGV+T +
Sbjct: 120 VKREKSGSIVDARCRSLTAGFVKEKKERGEDVELCVYHDNLDLLEPHNLIPPGVWTFDGM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+QQ CPYF AR M+ + NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LKYGEQQKQCPYFTARRMMPYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + L AT+ ++ ++++I K+TDA +L+ EY +LV+GL A
Sbjct: 240 NVCIESLSIDLTEDVLRKATKGVNNLDRKITEMKSTDAEKLQNEYAKLVDGLRSADEARS 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A+++NP LP D+L EAVPGNIRRAEHF+ L+R ++YL+ R++ NV + P +F++
Sbjct: 300 EEAFMANPVLPDDLLTEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVSDTPPAFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T +++ +Q + FATLV TY GF IIIEP
Sbjct: 360 LRDLTYIERKPLRFCAERLTSLVRTLELTSIEDYQPLQEVATFATLVATYETGFLIIIEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L L+C DA++A+KPVF+RF SV++TSGT+SP+D+YPR+LNF+ VV S
Sbjct: 420 FESATATVPNPILHLTCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLNFNTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+LTR PM++ RG+DQ ++++F+ R+D V RN+G LL+E + PDG+V FF
Sbjct: 480 FTMTLTRKSFLPMIVDRGNDQNQITSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W IL + ++KL+ +ET D ET LAL+ +R AC+ GRGAV VA
Sbjct: 540 SYLYMESIISAWQGMEILDTVWKYKLILVETPDAQETALALETFRTACNNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVP+QYT S+IL ARLE+LR+T++IKE DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCMGVPYQYTESRILKARLEFLRETYRIKEADFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRVIR K DYG+M+ ADKR+++ K+S+LP WI L LS D A+ A+ F
Sbjct: 660 AQCLGRVIRGKDDYGIMVLADKRFNK--KQSQLPKWIQHGLDAKSTKLSIDQAVSTAKAF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
LR M+ P+ +A G + S DLE
Sbjct: 718 LRDMSVPWSRAEQEGHSS-WSLEDLE 742
>gi|254569252|ref|XP_002491736.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|238031533|emb|CAY69456.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|328351762|emb|CCA38161.1| DNA excision repair protein ERCC-2 [Komagataella pastoris CBS 7435]
Length = 773
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/738 (50%), Positives = 519/738 (70%), Gaps = 10/738 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++KR LD G+C+LEMP+GTGKTI+LLSL SY
Sbjct: 1 MKFLIDDLPVIFPYPKIYPEQYAYMCDIKRTLDIGGNCILEMPSGTGKTISLLSLTVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL L +++T+ LG +GL+SRKNLC++
Sbjct: 61 MFYPEHR-KIIYCSRTMSEIEKALIELTKLMDFRTKELGVKENFRGLGLTSRKNLCLHP- 118
Query: 121 VLAAENRD-SVDAACRKRTASWVRALAA--ENPNIETCEFFENYEKAASAAVLPPGVYTL 177
++ E + VD CR+ T + A E + C F E S +P GVY+
Sbjct: 119 -ISQERKGIVVDEKCRRMTNGQLSLQVAKGEADKDQLCSFHEKMNDLDSHEYIPIGVYSF 177
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
++L + K G CPYF R M+ F N+++YSY YLLDPK+A +SKE+ KES+V+FDEAH
Sbjct: 178 EELIKYCKGVGICPYFTVRRMMSFCNIIIYSYHYLLDPKIAQRVSKELSKESIVIFDEAH 237
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
NIDNVCIE+LS+ + TL+ A+R ++ ++++++ K D+ +L+ EY RLVEGL +
Sbjct: 238 NIDNVCIESLSLDLTNDTLKKASRGVNSLSKKVDEIKRIDSKKLQDEYERLVEGLRATES 297
Query: 298 LPNAWL--SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
N L +NP LP DIL E++PGNIRR EHF+ L+R ++YL+ R++ +V E P SF
Sbjct: 298 SRNEELIMANPILPDDILTESIPGNIRRGEHFVMFLKRFIEYLKTRMKVLHVISETPASF 357
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + I++K LRFC ERL L+ TLE+T+ +EF+ ++ I FATLV TY GF +I
Sbjct: 358 LQHLKLLTFIERKPLRFCAERLALLVKTLELTEIEEFIALKDIATFATLVSTYETGFQLI 417
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+EP++ P+P+L +C DAS+A+KP+FDRF SV+ITSGT+SP+D+YP++L F V+
Sbjct: 418 LEPYETENASGPNPILHFTCLDASIAIKPIFDRFSSVIITSGTISPLDMYPKMLKFDTVI 477
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
S+ M+L+R P+++T+GSDQ+ +S++F++R+DP V RNYG LL+E I PDG+V
Sbjct: 478 QESYTMTLSRRSFLPLIVTKGSDQVSISSRFEIRNDPSVVRNYGTLLIEFSKITPDGLVV 537
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W + GIL E+ ++KL+ +ET D ET+L L+ YRKAC GRGAV
Sbjct: 538 FFPSYLYMESIISMWQNMGILDEVWKYKLILVETPDSQETSLGLETYRKACSNGRGAVLL 597
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD H+GR V+M G+PFQYT S+IL ARLEYLRD QIKE +FL+FDA+
Sbjct: 598 SVARGKVSEGIDFDHHFGRTVLMIGIPFQYTESRILKARLEYLRDHHQIKENEFLSFDAM 657
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR KR++LP WI +L DA NLSTDMA+ A
Sbjct: 658 RHAAQCLGRVLRGKDDYGIMVLADRRFSR--KRNQLPKWIAQNLLDADTNLSTDMAIANA 715
Query: 716 REFLRKMAQPYDKAGSIG 733
++FLR +AQP + G
Sbjct: 716 KKFLRTLAQPSNPKDQEG 733
>gi|354544295|emb|CCE41018.1| hypothetical protein CPAR2_300070 [Candida parapsilosis]
Length = 794
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/746 (49%), Positives = 514/746 (68%), Gaps = 16/746 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKTI+LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L ++ LG +GL+SRKNLC+N
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEFRASELGYVEDFRGLGLTSRKNLCLNPL 119
Query: 121 VLAAENRDSVDAACRKRTASWVR-----ALAAENPNIET------CEFFENYEKAASAAV 169
+ + + VD CR+ T ++ + E I+ C F E +
Sbjct: 120 ISREKKGNVVDEMCRRVTNGQLKEKIEKGVVTEEDQIQDPAKYSLCSFHEKLYDLDPHDL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L + K+ G CPYF AR M+ F N+++YSY YLLDPK+A +S+E+ K+S
Sbjct: 180 IPQGVYSFDALIRYCKEMGTCPYFTARRMIPFCNIIIYSYHYLLDPKIADRVSRELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + L+ ATR +++ +E KA D+ +L+ EY +LV
Sbjct: 240 IIIFDEAHNIDNVCIESLSLDLTEDVLKRATRGANKLADAVEDMKAQDSEKLQNEYEQLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A ++SNP LP D+L EA+PGNIR+ EHF+ L+R ++YL+ R++ +V
Sbjct: 300 EGLRQAEVEREQEMFMSNPILPQDLLDEAIPGNIRKGEHFVAFLKRFIEYLKTRMKVLHV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P SF+ + ID+K L+FC ERL L+ TLE+T+ ++F ++ I FATLV T
Sbjct: 360 ISETPTSFLQHLKELTYIDKKPLKFCSERLSLLVKTLELTEIEDFNALKDIATFATLVST 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF +I+EPF+ +P+P+L +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YP+
Sbjct: 420 YDTGFQLILEPFETEGSTVPNPMLHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPK 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+LNF V+ S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 480 MLNFQTVIQESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAK 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W G+L E+ +HKL+ +ET D ET+LAL+ YRKAC
Sbjct: 540 ITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQETSLALETYRKACS 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD FQIKE
Sbjct: 600 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKEN 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R++R K+++LP WI L D+ NLS
Sbjct: 660 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFAR--KKAQLPKWIAQALNDSDTNLS 717
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIG 733
TDMAL A++FLR +AQP + G
Sbjct: 718 TDMALATAKKFLRSLAQPTNPKDQEG 743
>gi|330947928|ref|XP_003307004.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
gi|311315183|gb|EFQ84891.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/746 (50%), Positives = 520/746 (69%), Gaps = 6/746 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY +YPEQY+YM +LKR LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFYIDNLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E+EK LAELK L Y+T LG +GL+SRKNLC++
Sbjct: 61 QHYPEKR-KLIYCSRTMSEIEKALAELKALMKYRTTELGYEEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ +E C + EN + ++PPGV+T +
Sbjct: 120 VKREKSGTVVDARCRSLTAGFVKEKKERGEPVELCVYHENLDLLEPHNLIPPGVWTFDGM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+QQ CPYF AR M+ NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LKYGEQQKQCPYFTARRMMPHCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + L AT+ ++ ++++I K++DA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDVLRKATKGVNNLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARN 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NPALP D+L EAVPGNIRRAEHF+ L+R ++YL+ R++ NV + P F+
Sbjct: 300 EDAFMANPALPDDLLTEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY GF +IIEP
Sbjct: 360 LRDLTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLIIEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL L+C DA++A+KPVF+RF SV++TSGT+SP+D+YPR+LNF+ VV S
Sbjct: 420 FESATATVPNPVLHLTCLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLNFNTVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+LTR PM++ RG+DQ V+++F+ R+D V RN+G LL+E + PDG+V FF
Sbjct: 480 FTMTLTRKSFLPMIVDRGNDQNQVTSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W IL + ++KL+ +ET D ET LAL+ +R AC+ GRGAV VA
Sbjct: 540 SYLYMESIISAWQGMEILDTVWKYKLILVETPDAQETALALETFRTACNNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR VI GVP+QYT S+IL ARLE+LR+T++IKE DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHHYGRTVICMGVPYQYTESRILKARLEFLRETYRIKEADFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRVIR K DYG+M+ ADKR+++ K+++LP WI L LS D A+ A+ F
Sbjct: 660 AQCLGRVIRGKDDYGIMVLADKRFNK--KQTQLPKWIQQGLDAKSTKLSIDQAVGAAKNF 717
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLE 744
L++M+ P+ +A G + S DLE
Sbjct: 718 LKEMSIPWSRAEQEGHSS-WSLEDLE 742
>gi|444320679|ref|XP_004180996.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS 6284]
gi|387514039|emb|CCH61477.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS 6284]
Length = 779
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/739 (48%), Positives = 521/739 (70%), Gaps = 10/739 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++K+ LD G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPKIYPEQYQYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+ + LG + +GL+SRKNLC++ +
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYREKELGVKEEFRGLGLTSRKNLCLHPQ 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPN--IETCEFFENYEKAASAAVLPPGVYTLQ 178
+ + VD CR+ T + + +P+ +E C++ EN K LP GV++ +
Sbjct: 120 ISKEKKGTVVDEKCRRLTNGQNKRILENDPDAKVELCDYHENLYKLDVENYLPNGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +SKE+ K+S+V+FDEAHN
Sbjct: 180 KLIRYCEERTLCPYFIVRRMISMCNIIIYSYHYLLDPKIAERVSKEVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L A++ + + ++IE + D+ +L+ EY +LV+GL ++
Sbjct: 240 IDNVCIESLSLDLTNDVLRKASKGATTLAEKIEEVREIDSSKLQDEYEKLVKGLHA-SDI 298
Query: 299 PNAW----LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
NA + P L D+L EA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P S
Sbjct: 299 LNAEEEPVVETPVLSEDLLTEAIPGNIRRAEHFVAFLKRLIEYLKTRMKVLHVISETPKS 358
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
F+ + ID+K LRFC ERL L+ TLE+T+ ++F ++ I FATL+ TY GF +
Sbjct: 359 FLQHLKQLTFIDRKPLRFCSERLSLLVRTLEVTEIEDFNALKDIATFATLISTYEEGFLL 418
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPV 474
IIEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF
Sbjct: 419 IIEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFTTT 478
Query: 475 VSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIV 534
+ +S+ M+LT+ PM++T+GSDQ+ +S++F++RSDP + RNYG +LVE I PDG+V
Sbjct: 479 LQKSYSMTLTKKSFLPMIITKGSDQVAISSRFEIRSDPSIVRNYGSMLVEFAKITPDGMV 538
Query: 535 CFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVF 594
FF SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 539 VFFPSYLYMESIISMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAIL 598
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDA 654
SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA
Sbjct: 599 LSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDA 658
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHI 714
+R AAQC+GRV+R K DYG+M+ AD+R+SR +R++LP WI L DA LNLSTDMA+
Sbjct: 659 MRHAAQCLGRVLRGKDDYGVMVLADRRFSR--RRNQLPKWISQGLSDADLNLSTDMAIAN 716
Query: 715 AREFLRKMAQPYDKAGSIG 733
++FLR MAQP D G
Sbjct: 717 TKQFLRAMAQPTDPKDQEG 735
>gi|327351176|gb|EGE80033.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ATCC 18188]
Length = 773
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/722 (51%), Positives = 509/722 (70%), Gaps = 6/722 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y +PE KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHRPEQR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AELK L Y+TR LG A +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 AELKALMKYRTRQLGYAEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++E C + EN + + ++PPGV+TL D+ +G+Q CPYF R M+ F NV
Sbjct: 120 KKERGEDVELCIYHENLDLLEPSNLVPPGVFTLDDIIKYGEQHKQCPYFSIRRMMPFCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNIDNVCIE+LS+ + +L A+R +
Sbjct: 180 IIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGAT 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ ++IE K++DA +L+ EY +LVEGL A ++NPALP D+LKEAVPGNIR
Sbjct: 240 NLERKIEEMKSSDAEKLQNEYQKLVEGLREADEARQEEQLMANPALPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ + E P+SF+A + I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTFIERKPLRFCAERLASLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + +++ +Q + FATL TY +GF +I+EPF+ +P+P+L +C DA++A+
Sbjct: 360 TLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESETATVPNPILHFTCLDAAIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRF SV++TSGTLSP+++YP++L F V+ S+ M+L R PMV+TRGSDQ +
Sbjct: 420 KPVFDRFSSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSFLPMVVTRGSDQAQI 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R+DPGV RNYG LL+E I PDGIV FF SY YM+ II+ W GIL + +
Sbjct: 480 SSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDLVWNY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D E++LAL+ YR AC GRGAV VARGKV+EGIDFD HYGR VI GVP
Sbjct: 540 KLILVETPDSQESSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHHYGRAVICIGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GRVIR K DYG+M+ AD+R+
Sbjct: 600 FQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
+ +RS+LP WI + ++ NLSTDMA+ A+ FLR MAQP+ G T S AD
Sbjct: 660 QK--RRSQLPKWISQAMLESETNLSTDMAVATAKSFLRTMAQPFKSRDQEGIST-WSLAD 716
Query: 743 LE 744
LE
Sbjct: 717 LE 718
>gi|336271859|ref|XP_003350687.1| hypothetical protein SMAC_02358 [Sordaria macrospora k-hell]
Length = 796
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/755 (49%), Positives = 519/755 (68%), Gaps = 20/755 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPE LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFNIDDLPVLFPYPRIYPE----------TLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 50
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L EL+ L ++ LG + +GL+SRKNLC++
Sbjct: 51 QYYPEHR-KLIYCSRTMSEIEKALVELRALMKFRAERLGREEEFRGLGLTSRKNLCLHPS 109
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + N+ETC + +N + ++P G++TL L
Sbjct: 110 VKREKSGTIVDARCRSLTAGFVKEKREKGENVETCIYHDNLDLLEQGNLIPNGIWTLDGL 169
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+++ CPYF AR M+Q+ NV++YSY YLLDPK+A +SK++ K+ +VVFDEAHNID
Sbjct: 170 LRYGEEKKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNID 229
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--RGNL 298
NVCIE+LS + + +L ATR + +I K +D +L++EY +LVEGL G
Sbjct: 230 NVCIESLSTDITQDSLMRATRGAQNLEAKIAEMKDSDQEKLQSEYEKLVEGLKGLDEGRQ 289
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+A
Sbjct: 290 EDAFMANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAH 349
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 350 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEP 409
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++LNF VV S
Sbjct: 410 YESDTAKTPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLNFETVVQES 469
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E + PDG+V FF
Sbjct: 470 YAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARMTPDGMVVFFP 529
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 530 SYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETSLALETYRTACCNGRGAVLLCVA 589
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 590 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 649
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L DA+ NLSTDMA+ AR F
Sbjct: 650 AQCLGRVLRGKDDYGVMVLADRRFMK--KRAQLPKWINQALLDANTNLSTDMAVGNARAF 707
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADL----EKMTND 749
L++MAQP+ G ++ DL EKM D
Sbjct: 708 LKQMAQPFSSKDQEG-VSIWGMKDLRRHQEKMAED 741
>gi|261200873|ref|XP_002626837.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
gi|239593909|gb|EEQ76490.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
Length = 773
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/722 (51%), Positives = 509/722 (70%), Gaps = 6/722 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y +PE KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHRPEQR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AELK L Y+TR LG A +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 AELKALMKYRTRQLGYAEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++E C + EN + + ++PPGV+TL D+ +G+Q CPYF R M+ F NV
Sbjct: 120 KKERGEDVELCIYHENLDLLEPSNLVPPGVFTLDDIIKYGEQHKQCPYFSIRRMMPFCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNIDNVCIE+LS+ + +L A+R +
Sbjct: 180 IIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGAT 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ ++IE K++DA +L+ EY +LVEGL A ++NPALP D+LKEAVPGNIR
Sbjct: 240 NLERKIEEMKSSDAEKLQNEYQKLVEGLRGADEARQEEQLMANPALPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ + E P+SF+A + I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTFIERKPLRFCAERLASLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + +++ +Q + FATL TY +GF +I+EPF+ +P+P+L +C DA++A+
Sbjct: 360 TLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESETATVPNPILHFTCLDAAIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRF SV++TSGTLSP+++YP++L F V+ S+ M+L R PMV+TRGSDQ +
Sbjct: 420 KPVFDRFSSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSFLPMVVTRGSDQAQI 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R+DPGV RNYG LL+E I PDGIV FF SY YM+ II+ W GIL + +
Sbjct: 480 SSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDLVWNY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D E++LAL+ YR AC GRGAV VARGKV+EGIDFD HYGR VI GVP
Sbjct: 540 KLILVETPDSQESSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHHYGRAVICIGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GRVIR K DYG+M+ AD+R+
Sbjct: 600 FQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
+ +RS+LP WI + ++ NLSTDMA+ A+ FLR MAQP+ G T S AD
Sbjct: 660 QK--RRSQLPKWISQAMLESETNLSTDMAVATAKSFLRTMAQPFKSRDQEGIST-WSLAD 716
Query: 743 LE 744
LE
Sbjct: 717 LE 718
>gi|389638466|ref|XP_003716866.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
gi|351642685|gb|EHA50547.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
Length = 795
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/728 (50%), Positives = 512/728 (70%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M+F ++D+ V FPY IYPEQY+YM +LK+ LD G+C+LEMP+GTGKT LLSLI +Y
Sbjct: 1 MLFYIDDLPVIFPYPRIYPEQYAYMCDLKKTLDVGGNCVLEMPSGTGKTATLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y+ LG +GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALAELKNLMKYRAGELGKEEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + ++E C + +N + ++P GV+TL+ L
Sbjct: 120 VKREKSGAIVDARCRGLTAGFVKEKKEKGEDVELCVYHDNLDLLEPHNLIPNGVWTLEGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF +R M+Q+ NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 180 LRYGEEHKQCPYFTSRRMMQYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L A+R + + I + TD +L EY +LVEGL A
Sbjct: 240 NVCIESLSTDITEDSLRKASRGAMNLEKRINEMRETDQNQLEDEYRKLVEGLREADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF+A
Sbjct: 300 EDAFMSNPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLEVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ ++F +Q + FATLV TY +GF +++EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDFQPLQEVATFATLVATYDKGFLLLLEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ IP+PVL +C DA++A+KPVF+RF++V+ITSGTLSP+++YP++L F VV S
Sbjct: 420 YESEKSQIPNPVLHFTCLDAAIAIKPVFERFKTVIITSGTLSPLEMYPKMLGFDAVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++T+GSDQ +S+ F +R+DP V RNYG+LL E I PDG+V FF
Sbjct: 480 YAMTLARRSFLPMIVTKGSDQASISSSFAVRNDPAVVRNYGQLLTEFAKITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W IL EI ++KL+ +ET D ET +AL+ YR AC G GA+ VA
Sbjct: 540 SYFYMESIISMWQGMKILDEIWKYKLILVETPDAQETAVALETYRTACCNGTGAIMLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESLILKARLEFLRETYRIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR +LP WI L ++ +N+STDMA+ AR+F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFPK--KRPQLPKWINQALAESDVNMSTDMAVSAARKF 717
Query: 719 LRKMAQPY 726
L+ MAQP+
Sbjct: 718 LKSMAQPF 725
>gi|452840050|gb|EME41988.1| hypothetical protein DOTSEDRAFT_72929 [Dothistroma septosporum
NZE10]
Length = 798
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/765 (48%), Positives = 524/765 (68%), Gaps = 15/765 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +ED+ V FPY IYPEQY+YM +LKR LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFYIEDLPVLFPYPRIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E+EK LAELK L Y+ LG +GL+SRKNLC++
Sbjct: 61 QFYPE-ARKLIYCSRTMSEIEKALAELKALMKYRADQLGEVEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ +++ C + +N + ++PPGV+TL +
Sbjct: 120 VRREKSGSVVDARCRSLTAGFVKEKKERGEDVDLCIYHDNLDLLEPHNLIPPGVWTLDGM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 180 LQYGEQHKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R S + Q+I K TDA +L+ EY +LVEGL A +
Sbjct: 240 NVCIESLSIDLTEDSLRKAARGASNLEQKITEMKDTDAEKLQNEYAKLVEGLREADQARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A++SNPALP D+LKEAVPGNIRRAEHF L+R ++YL+ R++ +V E P SF+
Sbjct: 300 EGAFMSNPALPDDLLKEAVPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISETPPSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY GF +I+EP
Sbjct: 360 LKELTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYDTGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ + +P+L +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++L F VV S
Sbjct: 420 YESDSATVANPILHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFEAVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRG+DQ P+S+ F R+DP V +NYG+LL++ + PDGIV FF
Sbjct: 480 YAMTLARRSFLPMIVTRGADQAPISSNFQRRNDPNVVKNYGQLLIKFSKLTPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +I+ W + G L E+ + KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESVISMWQNMGTLDEVWKSKLILVETPDSQETSLALETYRTACSNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ G+P+QYT S+IL ARLE+L++T++IK+ FL FDA+R
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGIPYQYTESRILKARLEFLQETYRIKDSTFLAFDAMRHC 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD R+ + ++ +LP WI S L DA N+S D A A++F
Sbjct: 660 AQCLGRVLRGKDDYGIMVMADDRFKK--RKEQLPKWIGSALMDADSNMSVDQAEAAAKKF 717
Query: 719 LRKMAQPY-----DKAGSIGRKTLL-----SQADLEKMTNDGSIN 753
L++M++P+ D + + L+ ++A++E+ +G N
Sbjct: 718 LKQMSKPFPAHVQDGISTWSYEDLMAHKQKAEAEVERQERNGEYN 762
>gi|294659657|ref|XP_462055.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
gi|199434130|emb|CAG90541.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
Length = 794
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/738 (49%), Positives = 516/738 (69%), Gaps = 17/738 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKTI+LLS+ +Y
Sbjct: 1 MKFYIDDLPILFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTISLLSITVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L ++ LG + +GLSSRKNLC++
Sbjct: 61 MHYPEHR-KVVYCSRTMSEIEKALIELHNLMKFRAEQLGYVEEFRGLGLSSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIET-----------CEFFENYEKAASAAV 169
+ VD CR+ T ++ EN I T C F E+ + +
Sbjct: 120 ISKERKGIVVDEKCRRVTNGQLKK-KIENGLINTEQTQDPEANALCSFHESLNEMDQHNL 178
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L K+ G CPYF R M+ F N+++YSY YLLDPK+A +SKE+ K+S
Sbjct: 179 IPAGVYSFDALINHCKEVGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIADRVSKEISKDS 238
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + TL+ ATR +++ ++ K+ D+ +L+ EY +LV
Sbjct: 239 IIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGANKLGDAVDDMKSQDSEKLQNEYEKLV 298
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A ++SNP LP D+L EA+PGNIR+AEHF+ L+R ++YL+ R++ +V
Sbjct: 299 EGLRQAEIARDEELFMSNPTLPQDLLDEAIPGNIRKAEHFISFLKRFIEYLKTRMKVLHV 358
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P+SF+ + ID+K L+FC ERL L+ TLE+++ ++F ++ I FATLV T
Sbjct: 359 ISETPISFLQHLKDLTFIDRKPLKFCSERLSLLVRTLELSEIEDFTALKDIATFATLVST 418
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF +I+EPF+ +P+P+L +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YP+
Sbjct: 419 YDTGFQLILEPFETEGSTVPNPILHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPK 478
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+LNF V+ S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 479 MLNFQTVIQESYTMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAK 538
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
IVPDG+V FF SY YM+ II+ W + G+L E+ ++KL+ +ET D ET+LAL+ YRKAC
Sbjct: 539 IVPDGMVVFFPSYLYMESIISMWQNMGVLDEVWKYKLILVETPDAQETSLALETYRKACS 598
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGA+ SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD +QI+E
Sbjct: 599 NGRGAILLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDHYQIREN 658
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+SR K+++LP WI L D+ NLS
Sbjct: 659 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSR--KKNQLPKWIAQALNDSDTNLS 716
Query: 708 TDMALHIAREFLRKMAQP 725
TDMAL A++FLR +AQP
Sbjct: 717 TDMALANAKKFLRSLAQP 734
>gi|403216750|emb|CCK71246.1| hypothetical protein KNAG_0G01890 [Kazachstania naganishii CBS
8797]
Length = 773
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/738 (48%), Positives = 519/738 (70%), Gaps = 8/738 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++KR LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPKIYPEQYHYMCDIKRTLDAGGNSILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+ + LG A + +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRAKELGHAEEFRGLGLTSRKNLCLHPV 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPN--IETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + E+PN +E C + EN LP GV++ +
Sbjct: 120 VRKERKGTVVDEKCRRLTNGVNKRKLEEDPNAEVELCAYHENLYDLDVENYLPNGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S+E+ K+S+V+FDEAHN
Sbjct: 180 KLIKYCEEKTLCPYFIVRRMISMCNIIIYSYHYLLDPKIAERVSREVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L A + + + ++++ ++ DA +L+ EY++LV+GL + +
Sbjct: 240 IDNVCIESLSLDLTNDVLRRAAKGANSLEEKVQEVRSVDATKLQDEYSKLVQGLHMVDIV 299
Query: 299 P---NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
P ++ P L D+L EA+PGNIRRAEHF+ ++RL++YL+ R++ +V E P SF
Sbjct: 300 PAQEETFVETPVLSEDLLTEAIPGNIRRAEHFVSFMKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+T+ ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKHLTFIDRKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEDGFQLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+ F SV+ITSGT+SP+D+YP++LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFETFSSVIITSGTISPLDMYPKMLNFETVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG ++VE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMMVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ I++ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILM 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD YGR V+M G+PFQYT S+IL ARLE+LR+ +QIKE DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIKENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R++R K+S+LP WI L DA +NLSTDMA+ A
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFAR--KKSQLPKWIAQGLSDADMNLSTDMAIANA 717
Query: 716 REFLRKMAQPYDKAGSIG 733
++FLR MAQP D G
Sbjct: 718 KQFLRTMAQPTDPKDQEG 735
>gi|453084907|gb|EMF12951.1| DNA repair helicase RAD3 [Mycosphaerella populorum SO2202]
Length = 806
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/738 (49%), Positives = 513/738 (69%), Gaps = 5/738 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F + D+ V FPY IYPEQY+YM +LK LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIGDLPVLFPYPRIYPEQYAYMCDLKHTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y+ LG +GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALAELKALMKYRADQLGVVEDFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ +++ C + +N + ++PPGV+TL +
Sbjct: 120 VKREKSGSVVDARCRSLTAGFVKEKKERGEDVDLCIYHDNLDLLEPHNLIPPGVWTLDGM 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++Q CPYF AR M+ F NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LRYGEEQKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R ++++I+ K TDA +L+ EY +LVEGL A
Sbjct: 240 NVCIESLSIDLTEDSLRKAARGAENLDRKIKEMKDTDAEKLQNEYAKLVEGLREADTARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
A++SNPALP D+LKEAVPGNIRRAEHF L+R ++YL+ R++ +V E P SF+
Sbjct: 300 EGAFMSNPALPDDLLKEAVPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISETPPSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATL TY GF +I+EP
Sbjct: 360 LKELTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLAATYDTGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+PVL +C DA++A+KPVF+RF SV+ITSGT+SP+++YP++L F VV S
Sbjct: 420 YESDTATVPNPVLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLGFSAVVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F RSDP RNYG L++E + PDGIV FF
Sbjct: 480 YAMTLARRSFLPMIVTRGSDQNQISSGFQTRSDPANIRNYGNLIIEFSKLTPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ +I+ W GIL ++ + KL+ +ET D ET+LAL+ YR AC GRGAV VA
Sbjct: 540 SYLYMESVISMWQSMGILDQVWKSKLILVETPDSQETSLALETYRTACSNGRGAVLLCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R
Sbjct: 600 RGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHC 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ ADKR+++ KR++LP WI + ++ N+S D A+ A+ F
Sbjct: 660 AQCLGRVLRGKDDYGIMVMADKRFAK--KRNQLPKWISGEMMESDSNMSVDQAVAAAKRF 717
Query: 719 LRKMAQPYDKAGSIGRKT 736
L++M++P+ + G T
Sbjct: 718 LKQMSKPFPASMQDGIST 735
>gi|241957053|ref|XP_002421246.1| 5' to 3' DNA helicase, putative; DNA repair helicase Rad3
homologue, putative; transcription initiation factor
TFIIH subunit, putative [Candida dubliniensis CD36]
gi|223644590|emb|CAX40578.1| 5' to 3' DNA helicase, putative [Candida dubliniensis CD36]
Length = 781
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/746 (48%), Positives = 516/746 (69%), Gaps = 16/746 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L ++ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEFRANELGEVEDFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVR-----ALAAENPNI---ET---CEFFENYEKAASAAV 169
+ VD CR+ T ++ + E + ET C + E +
Sbjct: 120 ISKERKGVVVDEKCRRITNGQLKEKIEKGVITEEDQVRDPETNSLCSYHEKLYDLEPHNL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L + K++G CPYF R M+ F N+++YSY YLLDPK+A +S+E+ K+S
Sbjct: 180 VPSGVYSFDALLKYCKEEGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSRELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+V+FDEAHNIDNVCIE+LS+ + +TL+ A+R +++ + IE K D+ +L+ EY +LV
Sbjct: 240 IVIFDEAHNIDNVCIESLSLDLTDETLKKASRGANKLGEAIEDMKTQDSEKLQNEYEQLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A +++NP LP D+L EA+PGNIR+ EHF+ L+R ++YL+ R++ +V
Sbjct: 300 EGLRQAEIARDQELFMANPVLPQDLLDEAIPGNIRKGEHFIAFLKRFIEYLKTRMKVLHV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P SF+ + I++K LRFC ERL L+ TLE+T+ ++F ++ I FATLV T
Sbjct: 360 ISETPTSFLQHLKELTYIERKPLRFCSERLSLLVRTLELTEIEDFNALKDIATFATLVST 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF +I+EP++ +P+P+L +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YP+
Sbjct: 420 YDSGFQLILEPYETEGSTVPNPILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPK 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+L F V+ S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 480 MLKFETVIQESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAK 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W + G+L E+ +HKL+ +ET D ET+LAL+ YRKAC
Sbjct: 540 ITPDGMVVFFPSYLYMESIISMWQNMGVLDEVWKHKLILVETPDAQETSLALETYRKACS 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD FQIKE
Sbjct: 600 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKEN 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R++R K+++LP WI L D+ NLS
Sbjct: 660 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFAR--KKNQLPKWIAQALNDSDTNLS 717
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIG 733
TDMAL A++FLR +AQP + S G
Sbjct: 718 TDMALATAKKFLRSLAQPTNPKDSEG 743
>gi|448537080|ref|XP_003871257.1| Rad3 protein [Candida orthopsilosis Co 90-125]
gi|380355614|emb|CCG25132.1| Rad3 protein [Candida orthopsilosis]
Length = 792
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/769 (47%), Positives = 522/769 (67%), Gaps = 18/769 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKTI+LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L ++ LG +GL+SRKNLC+N
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEFRASELGYVEDFRGLGLTSRKNLCLNPL 119
Query: 121 VLAAENRDSVDAACRKRTASWVR-----ALAAENPNIET------CEFFENYEKAASAAV 169
+ + + VD CR+ T ++ + E + C + E +
Sbjct: 120 ISREKKGNVVDEMCRRVTNGQLKEKIEKGVVTEEDQVRDPAKYSLCSYHEKLYDLDPHEL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L + K+ G CPYF R M+ F N+++YSY YLLDPK+A +S+E+ K+S
Sbjct: 180 VPSGVYSFDALIRYCKEMGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIADRVSRELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIE+LS+ + L+ ATR +++ + +E KA D+ +L+ EY +LV
Sbjct: 240 IIIFDEAHNIDNVCIESLSLDLTEDVLKRATRGANKLAEAVEDMKAKDSEKLQNEYEQLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
+GL A ++SNP LP D+L EA+PGNIR+ EHF+ L+R ++YL+ R++ +V
Sbjct: 300 DGLRQAEVEREQEMFMSNPILPQDLLDEAIPGNIRKGEHFIAFLKRFIEYLKTRMKVLHV 359
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
E P SF+ + ID+K L+FC ERL L+ TLE+T+ ++F ++ I FATLV T
Sbjct: 360 ISETPTSFLQHLKELTYIDKKPLKFCSERLSLLVKTLELTEIEDFNALKDIATFATLVST 419
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y GF +I+EPF+ +P+P+L +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YP+
Sbjct: 420 YDTGFQLILEPFETEGSTVPNPMLHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPK 479
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+LNF V+ S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 480 MLNFQTVIQESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAK 539
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I PDG+V FF SY YM+ II+ W G+L E+ +HKL+ +ET D ET+LAL+ YRKAC
Sbjct: 540 ITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKHKLILVETPDAQETSLALETYRKACS 599
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD FQIKE
Sbjct: 600 NGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKEN 659
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R++R K+++LP WI L D+ NLS
Sbjct: 660 DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFAR--KKAQLPKWIAQALNDSDTNLS 717
Query: 708 TDMALHIAREFLRKMAQPYDKAGSIGRKTL-LSQAD-LEKMTNDGSINE 754
TDMAL A++FLR +AQP + G + Q + +K N G I E
Sbjct: 718 TDMALATAKKFLRSLAQPTNPKDQEGVSVWDIDQLEAYQKQYNQGRIKE 766
>gi|403338080|gb|EJY68268.1| hypothetical protein OXYTRI_11217 [Oxytricha trifallax]
Length = 779
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/762 (49%), Positives = 521/762 (68%), Gaps = 64/762 (8%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELK+ LD++GH +LEMPTGTGKT+ LLSLI SY+ +K N KLIYCTRT+ EMEKTL
Sbjct: 1 MKELKKTLDSEGHAILEMPTGTGKTVCLLSLILSYIKAKKPN-FKLIYCTRTIVEMEKTL 59
Query: 85 AELKLL--------------------------HNYQTRHLGPAAKILAIGLSSRKNLCVN 118
ELK + N Q + L + ILA+ LSSR+NLC++
Sbjct: 60 EELKFVLEQREKDFPSDQSHQQQFQNMTLEESKNQQNQDLN--SPILALCLSSRRNLCIH 117
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAEN---------------------PNIET--- 154
V ++R+ VD+ CR+ TASWVR A + P+IE
Sbjct: 118 PEVSKDDDRERVDSKCRQLTASWVREDALQQRGGSSVFLNNDTSSKIMTNVIPDIEDLHK 177
Query: 155 ----CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQ 210
C F+E + A +P GVYTL+DLRAFGK+ CPYFLARH + AN++VY+Y
Sbjct: 178 NMKLCAFYETFWNRADQFTMPKGVYTLEDLRAFGKKHKMCPYFLARHFLLQANIIVYNYA 237
Query: 211 YLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI 270
Y+LDPK++ ++SKE+QK+ +VVFDE HNIDN CIEA S+++ R+TLE A+ NL ++ +
Sbjct: 238 YMLDPKISNLVSKELQKDCIVVFDECHNIDNACIEAFSLNISRKTLELASNNLRKLEDMV 297
Query: 271 ERFKATDAGRLRAEYNRLVEGLALRGN------LPNAWLSNPALPSDILKEAVPGNIRRA 324
+ K + RL+ EY RLVEGL L G LS+P L D+LKEAVPG+IR+A
Sbjct: 298 KEEKVSSTSRLQDEYKRLVEGLVLGGENKGIQLSEKELLSHPLLAQDVLKEAVPGSIRKA 357
Query: 325 EHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL 384
EHF++ LRR++ L+ L+T V+ + P+ + + + +DQ++L+F ++RL SLM TL
Sbjct: 358 EHFINFLRRIIVCLKEELKTREVKIQTPLQLIYTFQGNYFLDQRSLKFAHDRLSSLMNTL 417
Query: 385 EITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP 444
+I DEF I + DFATL+ TY +GFS+IIEP+ + I DP+LQ C DAS+A KP
Sbjct: 418 QIAAVDEFNPINIVADFATLLSTYYKGFSVIIEPYPQD-NLIYDPLLQFYCLDASIATKP 476
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVST 504
VF+RF++V++TSGT+SPI++YP++L+F P R+F + L R+ + P+++T+G DQL +S+
Sbjct: 477 VFNRFRNVIMTSGTISPIEIYPKMLDFQPKTMRAFNIILPRNAVQPLIVTKGVDQLQISS 536
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
KFD R + G RNYG LL+E+ SIVPDGIVCFF SY YM+ II W++ GIL+++ ++KL
Sbjct: 537 KFDERENQGNIRNYGNLLIELSSIVPDGIVCFFTSYKYMEHIIIKWDEMGILQKVRENKL 596
Query: 565 VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
++IET+D ET LAL+NY++ACD GRGAVFFS+ARGKV+EG+DF HYGR VIMFG+P+Q
Sbjct: 597 IYIETKDNFETILALENYKQACDNGRGAVFFSIARGKVSEGVDFAGHYGRCVIMFGIPYQ 656
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 684
TLS+ L AR+++L++ F I+E DFLTFDA+RQ +QCVGRV+RSK DYG+MIFADKRYSR
Sbjct: 657 NTLSRNLKARMQFLKENFGIRENDFLTFDAMRQCSQCVGRVLRSKYDYGLMIFADKRYSR 716
Query: 685 HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY 726
DK+ K P WI + L + N+S D+A+ A F ++M Q +
Sbjct: 717 SDKQDKFPIWIRNQLEARNQNISIDIAIQTANTFFKEMGQAF 758
>gi|380492131|emb|CCF34825.1| DNA repair helicase rad15 [Colletotrichum higginsianum]
Length = 775
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/715 (51%), Positives = 502/715 (70%), Gaps = 5/715 (0%)
Query: 24 YMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKT 83
YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE+ KLIYC+RT+ E+EK
Sbjct: 7 YMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHNPEHR-KLIYCSRTMSEIEKA 65
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
LAELK L Y+ + LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 66 LAELKALMKYRAQELGEEEEFRGLGLTSRKNLCLHPSVKQEKSGAIVDARCRSLTAGFVK 125
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
N++ C + +N + ++P GV+T L +G+Q CPYF AR M+QF N
Sbjct: 126 EKKDRGENVDVCVYHDNLDLLEPHNLIPNGVWTFDGLLKYGEQHKQCPYFTARRMMQFCN 185
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
V++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR
Sbjct: 186 VIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGA 245
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+ ++I + TD +L+ EY +LVEGL A +A++SNPALP D+LKEAVPGNI
Sbjct: 246 QNLERKIAEMRDTDQEQLQNEYQKLVEGLRGADEARQEDAFMSNPALPDDLLKEAVPGNI 305
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM 381
RRAEHF+ L+R ++YL+ R++ + E P SF+A + + I++K LRFC ERL SL+
Sbjct: 306 RRAEHFVSFLKRFIEYLKTRMKVRHTISETPPSFLAHLREYTFIEKKPLRFCAERLTSLV 365
Query: 382 LTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
TLE+T+ +++ +Q + FATLV TY +GF +I+EPF+ +P+PVL +C DA++A
Sbjct: 366 RTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESETAEVPNPVLHFTCLDAAIA 425
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+KPVFDRF SV+ITSGT+SP+++YP++L F VV S+ M+L R PM++TRGSDQ
Sbjct: 426 IKPVFDRFSSVIITSGTMSPLEMYPKMLGFSTVVQESYSMTLARRSFLPMIVTRGSDQSS 485
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ST F +R++P V RNYG LL E I PDG+V FF SY YM+ II+ W IL+E+ +
Sbjct: 486 ISTSFQVRNEPSVVRNYGTLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMNILEEVWK 545
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
+KL+ +ET D ET+LAL+ YR AC GRGAV VARGKV+EGIDFD YGR V+ GV
Sbjct: 546 YKLILVETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGV 605
Query: 622 PFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
PFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R
Sbjct: 606 PFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRR 665
Query: 682 YSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
+ + KR++LP WI L DA N+STDMA+ AR FL++MAQP+ G T
Sbjct: 666 FQK--KRAQLPKWINQGLLDADTNVSTDMAVSSARRFLKQMAQPFRAKDQEGVST 718
>gi|448115115|ref|XP_004202752.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359383620|emb|CCE79536.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/747 (48%), Positives = 513/747 (68%), Gaps = 18/747 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQYSYM ++KR LD G+C+LEMP+GTGKTI+LLS+ +Y
Sbjct: 1 MKFYIDDLPILFPYPKIYPEQYSYMCDIKRTLDVGGNCILEMPSGTGKTISLLSITVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ LG + +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KVVYCSRTMSEIEKALIELHNLMKYRAEQLGYVEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNI------------ETCEFFENYEKAASAA 168
V VD CR+ T ++ EN + + C + E
Sbjct: 120 VSKEPKGVVVDEKCRRITNGQLKQ-QIENGKVSEEDQKRHPETKQLCSYHEELNDMEQHN 178
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
++P GVY+ L + K +G CPYF R M+ + N+++YSY YLLDPK+A +SK++ ++
Sbjct: 179 LIPAGVYSFDALTNYCKARGTCPYFTVRRMIPYCNIIIYSYHYLLDPKIAERVSKDISRD 238
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
S+++FDEAHNIDNVCIE+LS+ + TL+ ATR +++ I+ K+ D+ +L+ EY +L
Sbjct: 239 SIIIFDEAHNIDNVCIESLSLDLTDDTLQRATRGATKLGDAIDDMKSQDSEKLQNEYEKL 298
Query: 289 VEGLALRG--NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
VEGL ++SNP LP D+L EAVPGNIR+ EHF+ L+R ++YL+ R++ +
Sbjct: 299 VEGLRQSEIEREEELFMSNPILPKDLLDEAVPGNIRKGEHFISFLKRFIEYLKTRMKVLH 358
Query: 347 VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
V E P SF+ + ID+K LRFC ERL L+ TLE+T+ ++F ++ I FATLV
Sbjct: 359 VISETPTSFLQHLKDLTFIDRKPLRFCSERLSLLVRTLELTEIEDFTALKDIATFATLVS 418
Query: 407 TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYP 466
TY GF +I+EPF+ +P+P+L +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YP
Sbjct: 419 TYETGFQLILEPFETEGSSVPNPILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYP 478
Query: 467 RLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMV 526
R+LNF V+ S+ ++L R PM++T+G+DQ+ +S++F++R+DP V RNYG L++E
Sbjct: 479 RMLNFQTVIQESYTITLARRSFLPMIVTKGADQVSISSRFEIRNDPSVVRNYGSLVIEFS 538
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC 586
I PDG+V FF SY YM+ II+ W + G+L E+ ++KL+ +ET D ET+LAL+ +RKAC
Sbjct: 539 KITPDGMVVFFPSYLYMESIISMWQNMGVLDEVWKYKLILVETPDAQETSLALETFRKAC 598
Query: 587 DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE 646
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD FQI+E
Sbjct: 599 SNGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDHFQIRE 658
Query: 647 GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNL 706
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+SR K+S+LP WI L D+ NL
Sbjct: 659 NDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSR--KKSQLPKWIAQALLDSDTNL 716
Query: 707 STDMALHIAREFLRKMAQPYDKAGSIG 733
STDMAL A++FLR +AQP + G
Sbjct: 717 STDMALANAKKFLRSLAQPTNPKDQEG 743
>gi|225681891|gb|EEH20175.1| TFIIH basal transcription factor complex helicase subunit
[Paracoccidioides brasiliensis Pb03]
Length = 773
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/723 (50%), Positives = 506/723 (69%), Gaps = 6/723 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y KPE KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHKPEQR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AELK L Y+ + LG +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 AELKALMKYRAQQLGYTEDFRGLGLTSRKNLCLHPSVKREKSGTIVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++E C + EN + + ++PPGV+TL D+ +G+Q CPYF R M+ F NV
Sbjct: 120 KKERGEDVELCIYHENLDLLEPSNLVPPGVFTLDDMIKYGEQHKQCPYFSVRRMMPFCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNIDNVCIE+LS+ + +L A+R +
Sbjct: 180 IIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGAN 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + I+ K++DA +L+ EY +LVEGL A ++NPALP D+LKEAVPGNIR
Sbjct: 240 NLERRIDEMKSSDAEKLQNEYQKLVEGLREADEARQEEQLMANPALPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ + E P SF+A + I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLAHLKDLTFIERKPLRFCAERLTSLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + +++ +Q + FATL TY +GF +I+EPF+ +P+P+L +C DA++A+
Sbjct: 360 TLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESDTATVPNPILHFTCLDAAIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRF SV+ITSGTLSP+++YP++L F V+ S+ M+L R PM++TRGSDQ +
Sbjct: 420 KPVFDRFSSVIITSGTLSPLEMYPKMLGFTTVLQESYSMTLARRSFLPMIVTRGSDQAQI 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R+DPGV RNYG LL+E I PDGIV FF SY YM+ II+ W GIL I +
Sbjct: 480 SSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDSIWNY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D E++LAL+ YR AC GRGA+ VARGKV+EGIDFD HYGR VI GVP
Sbjct: 540 KLILVETPDSQESSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHHYGRTVICIGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+
Sbjct: 600 FQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
+ KR++LP WI + ++ NLSTDMA+ A+ FLR MAQP+ G T S AD
Sbjct: 660 QK--KRAQLPKWISQAMLESETNLSTDMAMATAKSFLRTMAQPFKSKDQEGIST-WSIAD 716
Query: 743 LEK 745
LE+
Sbjct: 717 LER 719
>gi|164428066|ref|XP_956536.2| DNA repair helicase RAD3 [Neurospora crassa OR74A]
gi|157071997|gb|EAA27300.2| DNA repair helicase RAD3 [Neurospora crassa OR74A]
Length = 796
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/755 (49%), Positives = 517/755 (68%), Gaps = 20/755 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPE LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFNIDDLPVLFPYPRIYPE----------TLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 50
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L EL+ L ++ LG + +GL+SRKNLC++
Sbjct: 51 QYYPEHR-KLIYCSRTMSEIEKALVELRALMKFRAERLGHEEEFRGLGLTSRKNLCLHPS 109
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + N+ETC + +N + ++P G++TL L
Sbjct: 110 VKREKSGAIVDARCRSLTAGFVKEKREKGENVETCVYHDNLDLLEPHNLIPNGIWTLDGL 169
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+++ CPYF AR M+Q NV++YSY YLLDPK+A +SK++ K+ +VVFDEAHNID
Sbjct: 170 MRYGEEKKQCPYFTARRMMQHCNVIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNID 229
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--RGNL 298
NVCIE+LS + + +L ATR + +I K +D +L++EY +LVEGL G
Sbjct: 230 NVCIESLSTDITQDSLMRATRGAQNLEAKISEMKDSDQEKLQSEYEKLVEGLKGLDEGRQ 289
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+A
Sbjct: 290 EDAFMANPTLPDDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAH 349
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 350 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYRPLQEVATFATLVATYEKGFLLILEP 409
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++LNF VV S
Sbjct: 410 YESDTAKTPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLNFETVVQES 469
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LL E I PDG+V FF
Sbjct: 470 YAMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFARITPDGMVVFFP 529
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YR AC GRGA+ VA
Sbjct: 530 SYLYMESIISMWQGMGILDEVWKHKLILVETPDAQETSLALETYRTACCNGRGAILLCVA 589
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R A
Sbjct: 590 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHA 649
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI +A+ NLSTDMA+ AR F
Sbjct: 650 AQCLGRVLRGKDDYGVMVLADRRFMK--KRAQLPKWINQAFLEANTNLSTDMAVGNARAF 707
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADL----EKMTND 749
L++MAQP+ G ++ DL EKM D
Sbjct: 708 LKQMAQPFSAKDQEG-VSIWGMEDLKRHQEKMAED 741
>gi|448112560|ref|XP_004202128.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359465117|emb|CCE88822.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/747 (48%), Positives = 513/747 (68%), Gaps = 18/747 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQYSYM ++KR LD G+C+LEMP+GTGKTI+LLS+ +Y
Sbjct: 1 MKFYIDDLPILFPYPKIYPEQYSYMCDIKRTLDVGGNCILEMPSGTGKTISLLSITVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ LG + +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KVVYCSRTMSEIEKALIELHNLMKYRAEQLGYVEEFRGLGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNI------------ETCEFFENYEKAASAA 168
+ VD CR+ T ++ EN + + C + E
Sbjct: 120 ISKEPKGVVVDEKCRRITNGQLKQ-QIENGKVSEEDQKRHPETKQLCSYHEELYDMEQHN 178
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
++P GVY+ L + K +G CPYF R M+ + N+++YSY YLLDPK+A +SK++ ++
Sbjct: 179 LIPAGVYSFDALINYCKARGTCPYFTVRRMIPYCNIIIYSYHYLLDPKIAERVSKDISRD 238
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
S+++FDEAHNIDNVCIE+LS+ + TL+ ATR +++ I+ K+ D+ +L+ EY +L
Sbjct: 239 SIIIFDEAHNIDNVCIESLSLDLTDDTLQRATRGATKLGDAIDDMKSQDSEKLQNEYEKL 298
Query: 289 VEGLALRG--NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
VEGL ++SNP LP D+L EAVPGNIR+ EHF+ L+R ++YL+ R++ +
Sbjct: 299 VEGLRQSEIEREEELFMSNPILPKDLLDEAVPGNIRKGEHFISFLKRFIEYLKTRMKVLH 358
Query: 347 VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
V E P SF+ + ID+K LRFC ERL L+ TLE+T+ ++F ++ I FATLV
Sbjct: 359 VISETPTSFLQHLKDLTFIDRKPLRFCSERLSLLVRTLELTEIEDFTALKDIATFATLVS 418
Query: 407 TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYP 466
TY GF +I+EPF+ +P+P+L +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YP
Sbjct: 419 TYETGFQLILEPFETEGSSVPNPILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYP 478
Query: 467 RLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMV 526
R+LNF V+ S+ ++L R PM++T+G+DQ+ +S++F++R+DP V RNYG LL+E
Sbjct: 479 RMLNFQTVIQESYTITLARRSFLPMIVTKGADQVSISSRFEIRNDPSVVRNYGSLLIEFS 538
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC 586
I PDG+V FF SY YM+ II+ W + G+L E+ ++KL+ +ET D ET+LAL+ +RKAC
Sbjct: 539 KITPDGMVVFFPSYLYMESIISMWQNMGVLDEVWKYKLILVETPDAQETSLALETFRKAC 598
Query: 587 DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE 646
GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD FQI+E
Sbjct: 599 SNGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDHFQIRE 658
Query: 647 GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNL 706
DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+SR K+S+LP WI L D+ NL
Sbjct: 659 NDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFSR--KKSQLPKWIAQALLDSDTNL 716
Query: 707 STDMALHIAREFLRKMAQPYDKAGSIG 733
STDMAL A++FLR +AQP + G
Sbjct: 717 STDMALANAKKFLRSLAQPTNPKDQEG 743
>gi|156846864|ref|XP_001646318.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116993|gb|EDO18460.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 776
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/762 (48%), Positives = 527/762 (69%), Gaps = 14/762 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++K+ LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYHYMCDMKKTLDAGGNSILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y++R LG A +GL+SRKNLC++ +
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALIELENLMDYRSRELGYAEDFRGLGLTSRKNLCLHPQ 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + +P +E C++ EN LP GVY+ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKRKLESDPEAKVELCDYHENLYDLEIEDYLPKGVYSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +Q+ CPYF+ R M+ N+++YSY YLLDPK+A +S+E+ K+S+V+FDEAHN
Sbjct: 180 RLLKYCEQKTLCPYFIVRRMISMCNIIIYSYHYLLDPKIAERVSREVSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA---LR 295
IDNVCIE+LS+ + L+ AT+ + + +IE + D+ +L+ EY +LV+GL +
Sbjct: 240 IDNVCIESLSLDLTNDMLKRATKGANALANKIEEVREVDSQKLQDEYEKLVKGLHTADIL 299
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ P L D+L EA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 EEEEEPLVEVPVLSQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+++ ++F ++ I FATLV TY GF +I
Sbjct: 360 LQHLKQLTFIDRKPLRFCSERLSLLVRTLEVSEIEDFNALKDIATFATLVSTYEDGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+L+ +C DAS+A+KPVF++F SV+ITSGT+SP+D+YPR+LNF+ V+
Sbjct: 420 IEPYEIENAAVPNPILRFTCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLNFNTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+LT+ PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 EKSYAMTLTKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W GIL E+ +HKL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIISMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR +R++LP WI L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--RRNQLPKWIAQGLSDADLNLSTDMAIANT 717
Query: 716 REFLRKMAQPYDKAGSIG------RKTLLSQADLEKMTNDGS 751
++FLR MAQP + G + L Q ++E+ + S
Sbjct: 718 KQFLRTMAQPTNPKDQQGVSVWNYEELLQHQQEVERKKGNNS 759
>gi|171690222|ref|XP_001910036.1| hypothetical protein [Podospora anserina S mat+]
gi|170945059|emb|CAP71170.1| unnamed protein product [Podospora anserina S mat+]
Length = 802
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/730 (50%), Positives = 508/730 (69%), Gaps = 9/730 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM++LK+ LDA G+C+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MEFFIDDLRVLFPYPRIYPEQYAYMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+S E LIYC+RT+ E+EK L ELK L ++ LG A+GL+SRKNLC++
Sbjct: 61 MSSQEKR-PLIYCSRTMSEIEKALVELKALMKFRAERLGHEEDFRAMGLTSRKNLCLHPD 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +++ + +++ C + +N + ++P GV++L L
Sbjct: 120 VKREKSGSVVDARCRSLTAGFIQEKKRKGEDVDVCVYHDNLDNLEPHNLIPNGVWSLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ NVV+YSY YLLDPK+A +SK+ K+ +VVFDEAHNID
Sbjct: 180 LRYGQKHTQCPYFTARRMMSQCNVVIYSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN--- 297
NVCIE+LS + ++L ATR + I + +D +L+ EY +LVEGL RG+
Sbjct: 240 NVCIESLSTDITEESLRRATRGAQFLENRINEMRDSDQQKLQDEYEKLVEGL--RGDDET 297
Query: 298 -LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+++++NP LP D+LKEAVPGNIRRAEHF+ LRR ++YL+ R++ V E P SF+
Sbjct: 298 REEDSFMANPTLPEDLLKEAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFL 357
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
A + + I++K LRFC ERL SL+ TLE+T +++ +Q + FATLV TY +GF +I+
Sbjct: 358 AHLKEYTFIEKKPLRFCAERLTSLVRTLELTRIEDYQPLQEVATFATLVATYEKGFLLIL 417
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP++ +P+PVL +C DA++A+KPVFDRF SV+ITSGT+SP+++YP++LNF VV
Sbjct: 418 EPYESDTAEVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLNFETVVQ 477
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
S+ M+L R PM++TRGSDQ +ST F +R++P V RNYG LLVE I PDGIV F
Sbjct: 478 ESYSMTLARRSFLPMIVTRGSDQATISTGFQVRNEPSVVRNYGSLLVEFAKITPDGIVLF 537
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
SY Y++ +I+ W G+L E+ ++KL+ +ET D ET LAL+ YR AC GRGAVF
Sbjct: 538 TPSYLYLESLISMWQGMGVLDEVWKYKLILVETPDAQETALALETYRTACKNGRGAVFLC 597
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EG+DFD+ +GR VI GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R
Sbjct: 598 VARGKVSEGVDFDKEFGRTVINIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMR 657
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQC+GRVIR K DYG+M+ AD+R+ K +LP WI L A NLSTDMA+ AR
Sbjct: 658 HAAQCLGRVIRGKDDYGVMVLADRRFK--SKIQQLPKWIHQALLGADTNLSTDMAVSNAR 715
Query: 717 EFLRKMAQPY 726
F + +AQP+
Sbjct: 716 RFFKMIAQPF 725
>gi|45201210|ref|NP_986780.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|44986064|gb|AAS54604.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|374110029|gb|AEY98934.1| FAGR114Cp [Ashbya gossypii FDAG1]
Length = 774
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/732 (48%), Positives = 515/732 (70%), Gaps = 8/732 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++K+ LDA G+ +LEMP+GTGKT++LL+L +Y
Sbjct: 1 MKFFIDDLPVIFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLALTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ E+ K+IYC+RT+ E+EK L EL+ L +Y+ + L + +GL+SRKNLC++ R
Sbjct: 61 MHYKEHR-KIIYCSRTMSEIEKALVELESLMDYRAKELQYQEEFRGLGLTSRKNLCLHPR 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T RA ++P N+E C + EN + LP GVY+ +
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQARARKQQDPEANVELCNYHENMYNYSPEEYLPLGVYSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + + + CPYF R M+ N+++YSY YLLDPK+ +S+E+ K+++V+FDEAHN
Sbjct: 180 KLIRYCEDKTLCPYFTVRRMISMCNIIIYSYHYLLDPKIEERVSREVSKDAIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + + L+ A++ S + +++E + D +L+ EY++LV+GL +
Sbjct: 240 IDNVCIESLSLDLTKDLLKRASKGASVLGKKVEEVRRVDTKKLQDEYDKLVQGLRANDIM 299
Query: 299 PN---AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ +P LP+DILK+AVPGNIRRAEHF+ L+R ++YL+ R++ +V E P SF
Sbjct: 300 EENEEPLVESPVLPADILKDAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHVISETPNSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LR+C ERL L TLEI + +EF ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIDRKPLRYCAERLSLLARTLEIDEVEEFNALKDIATFATLISTYESGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF++F SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLNFETVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYSMTLAQKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSILVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+TW GIL E+ ++KL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIISTWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAILL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGK++EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKISEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR K+++LP WI L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KKNQLPKWIAQGLSDADLNLSTDMAIANT 717
Query: 716 REFLRKMAQPYD 727
++FLR MAQ D
Sbjct: 718 KQFLRTMAQATD 729
>gi|254578942|ref|XP_002495457.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
gi|238938347|emb|CAR26524.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
Length = 770
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/762 (48%), Positives = 526/762 (69%), Gaps = 14/762 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM +LKR LD+ G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPKIYPEQYHYMCDLKRTLDSGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K+IYC+RT+ E+EK L EL+ L +Y+T+ LG +GL+SRKNLC++ +
Sbjct: 61 MHYPEHR-KIIYCSRTMSEIEKALVELENLMDYRTKELGYREDFRGLGLTSRKNLCLHPQ 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPN--IETCEFFENYEKAASAAVLPPGVYTLQ 178
V N VD CR+ T + +P+ +E C++ EN LP GV++ +
Sbjct: 120 VSKERNGTLVDEKCRRMTNGQAKHKQEADPDAKVELCDYHENLYNYQVEDYLPKGVFSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF+ R M+ N+++YSY YLLDPK+A +S E+ K+ +V+FDEAHN
Sbjct: 180 KLIRYCEERTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDGIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L+ AT+ + I+ + DA RL+ EY++LV+ L L
Sbjct: 240 IDNVCIESLSLDLTNDVLKRATKGAYALENRIDEVRQVDARRLQDEYDKLVQDLHAADIL 299
Query: 299 PNA---WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ P L D++ EA+PGNIRRAEHF+ L+RL++YL+ R++ +V E P SF
Sbjct: 300 DQEEEPAVETPVLSQDLITEAMPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + ID+K LRFC ERL L+ TLE+T+ ++F ++ I FATL+ TY GF +I
Sbjct: 360 LQHLKQLTFIDRKPLRFCAERLSLLVRTLEVTEIEDFTALKDIATFATLISTYESGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YPR+LNF V+
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFDTVL 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAIIL 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+MI AD+R+SR KR++LP WI L DA LNLSTDMA+ A
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMILADRRFSR--KRNQLPKWISQGLSDADLNLSTDMAIANA 717
Query: 716 REFLRKMAQ---PYDKAG-SIGRKTLLSQADLEKM--TNDGS 751
++FLR MAQ P D+ G S+ R L + EK N+G+
Sbjct: 718 KQFLRTMAQSTDPKDQEGVSVWRHEELIKYQQEKQGAPNNGT 759
>gi|240278769|gb|EER42275.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H143]
Length = 773
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/722 (50%), Positives = 506/722 (70%), Gaps = 6/722 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y +PE KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHQPEQR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AELK L Y+ + LG A +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 AELKALMKYRAQQLGFAEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ ++E C + EN + + ++PPGV+TL D+ +G+Q CPYF R M+ F V
Sbjct: 120 KKEKGEDVELCIYHENLDLLEPSNLVPPGVFTLDDITKYGEQHKQCPYFSVRRMMPFCKV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNIDNVCIE+LS+ + +L A+R +
Sbjct: 180 IIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGAN 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ ++IE K +DA +L+ EY +LVEGL A ++NPALP D+LKEAVPGNIR
Sbjct: 240 NLERKIEEMKRSDAEKLQNEYQKLVEGLREADEARQEEQLMANPALPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ + E P+SF+A + I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTFIERKPLRFCAERLTSLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + +++ +Q + FATL TY +GF +I+EPF+ +P+P+L +C DA++A+
Sbjct: 360 TLELVNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESETATVPNPILHFTCLDAAIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRF SV++TSGTLSP+++YP++L F V+ S+ M+L R PMV+TRGSDQ +
Sbjct: 420 KPVFDRFSSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSFLPMVVTRGSDQAQI 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R+DPGV RNYG LL+E I PDG+V FF SY YM+ II+ W GIL + +
Sbjct: 480 SSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPSYLYMESIISMWQGMGILDLVWNY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D E++LAL+ YR AC GRGAV VARGKV+EGIDFD HYGR VI GVP
Sbjct: 540 KLILVETPDSQESSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHHYGRAVICIGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GRVIR K DYG+M+ AD+R+
Sbjct: 600 FQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVIRGKDDYGVMVLADRRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
+ +R++LP WI + ++ NLSTDMA+ A+ FL+ MAQP+ G T S D
Sbjct: 660 QK--RRTQLPKWISQAMLESETNLSTDMAVATAKSFLKTMAQPFKSKDQEGIST-WSLTD 716
Query: 743 LE 744
LE
Sbjct: 717 LE 718
>gi|402078170|gb|EJT73519.1| DNA repair helicase rad15 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 791
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/728 (49%), Positives = 510/728 (70%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M+F ++D+ V FPY IYPEQY+YM +LKR LDA G+C+LEMP+GTGKT LLSLI +Y
Sbjct: 1 MLFYIDDLPVIFPYPRIYPEQYAYMCDLKRTLDAGGNCVLEMPSGTGKTATLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAEL+ L Y+ LG +GL+SRKNLC++
Sbjct: 61 QHNPEHR-KLIYCSRTMSEIEKALAELRALMKYRAEQLGKEEDFRGLGLTSRKNLCLHPA 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +++ + +++ C + +N + ++P GV+T L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFIKEKKDKGEDVDVCVYHDNLDLLEPHNLIPNGVWTFDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+Q+ NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 180 LRYGEQHKQCPYFTARRMMQYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L ATR + I++ + TD +L EY +LV GL A
Sbjct: 240 NVCIESLSTDLTEDSLRKATRGAQNLENRIKQMRETDQKQLEDEYQKLVAGLRDADEARQ 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NP LP D+++EAVPGNIRRAEHF+ L+R ++YL+ RL+ V E P SF+A
Sbjct: 300 EDAFMANPVLPDDLIREAVPGNIRRAEHFVAFLKRFIEYLKTRLKVLEVISETPPSFLAH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ + I++K LRFC ERL SL+ TLE+T+ ++F +Q + FATLV TY +GF +++EP
Sbjct: 360 LKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDFQPLQEVATFATLVATYEKGFLLLLEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ + +PVL +C DA++A+KPVF+RF++V+ITSGTLSP+++YP++L F +V S
Sbjct: 420 YETVKSKVVNPVLHFTCLDAAIAIKPVFERFKTVIITSGTLSPLEMYPKMLGFDAIVQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++T+GSDQ +S+ F +R+D V RNYG LL E I PDG+V FF
Sbjct: 480 YSMTLGRRSFLPMIVTKGSDQAAISSSFAVRTDLPVVRNYGNLLTEFAKITPDGMVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W IL+E+ ++KL+ +ET D ET +AL+ YR AC G GAV F VA
Sbjct: 540 SYFYMESIISMWQGMNILEEVWKYKLILVETPDAQETAVALETYRTACCNGTGAVMFCVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVP+QYT S IL ARLE+LR+T++IKE DFL+FDA+R A
Sbjct: 600 RGKVSEGIDFDHQYGRAVLCIGVPYQYTESLILKARLEFLRETYRIKENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KRS+LP WI L ++ NLSTDMA+ AR+F
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFPK--KRSQLPKWINQALLESDTNLSTDMAVSSARKF 717
Query: 719 LRKMAQPY 726
L+ MAQP+
Sbjct: 718 LKTMAQPF 725
>gi|384496850|gb|EIE87341.1| hypothetical protein RO3G_12052 [Rhizopus delemar RA 99-880]
Length = 675
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/656 (54%), Positives = 478/656 (72%), Gaps = 18/656 (2%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT++LLSLI +Y + PE KL+YC+RTV E++K L ELK L Y+ R G
Sbjct: 1 MPSGTGKTVSLLSLIVAYQMQYPEKHRKLVYCSRTVPEIDKALGELKRLMEYR-RDQGIQ 59
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA---------------LA 146
+ IGL+SRKNLC+N V SVD+ CR TASWVRA +
Sbjct: 60 EEFFGIGLTSRKNLCLNPDVSKERKGRSVDSKCRNLTASWVRAKVVKRRPEQEQDGDAME 119
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+ + C+F+E E A S +P G+YTL+DL+A+G++ +CPY+L R + FANV++
Sbjct: 120 VDQSPVPLCDFYEQLEAANSPNPIPNGIYTLEDLKAYGRKMRYCPYYLVRRAIPFANVII 179
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
YSY Y+LDPKVA ++S+E+ K+S+VVFDEAHNIDNVCIE+LS+ + R L+ + R+++ +
Sbjct: 180 YSYHYMLDPKVAELVSRELSKDSIVVFDEAHNIDNVCIESLSIDLTRPMLDASARSITVL 239
Query: 267 NQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+++IE K TDA RL+ EY +LVEGL A + ++++P LP D+LKEAVPGNIRRA
Sbjct: 240 SEKIEEIKNTDAERLKNEYTKLVEGLRDANSARDEDTFMASPILPDDLLKEAVPGNIRRA 299
Query: 325 EHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL 384
EHF+ LRR ++YL+ RL +V E P SF+ + I++K LRFC ERL SL+ TL
Sbjct: 300 EHFVAFLRRFIEYLKTRLRVMHVVAETPASFLQHLKDVTYIERKPLRFCAERLSSLVRTL 359
Query: 385 EITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP 444
E+TD + F +Q + FATL TY +GF +I+EPF+ IP+PVL +C DAS+A+KP
Sbjct: 360 ELTDLEHFSSLQKVAAFATLTSTYDKGFLLILEPFEHETATIPNPVLHFTCLDASIAIKP 419
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVST 504
VFDRF +VVITSGTLSP+D+YP++LNF VV S+ M+L+R+C PMV+TRGSDQ+ VS+
Sbjct: 420 VFDRFSTVVITSGTLSPLDMYPKMLNFEAVVQESYSMTLSRNCFLPMVITRGSDQVAVSS 479
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
KF++R+DP V RN+G+++VE IVPDG+VCFF SY YM+ I++ WND GIL E ++KL
Sbjct: 480 KFEVRNDPAVVRNFGQIMVEFAKIVPDGVVCFFPSYLYMESIVSMWNDMGILNEAWKYKL 539
Query: 565 VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
+F+ET D ET+LAL NYRKACD GRGA+ SVARGKV+EGIDFD +YGR VIMFG+P+Q
Sbjct: 540 IFVETPDAAETSLALANYRKACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGIPYQ 599
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADK 680
YT S+IL ARLEYLRD I+E DFLTFDA+R AAQCVGRV+R K DYG+M+FADK
Sbjct: 600 YTESRILKARLEYLRDNLHIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADK 655
>gi|255718745|ref|XP_002555653.1| KLTH0G14300p [Lachancea thermotolerans]
gi|238937037|emb|CAR25216.1| KLTH0G14300p [Lachancea thermotolerans CBS 6340]
Length = 782
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/737 (48%), Positives = 513/737 (69%), Gaps = 7/737 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM ++K+ LDA G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVIFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLAVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
E+ K+IYC+RT+ E+EK L EL+ L +Y+++ LG +GL+SRKNLC++ R
Sbjct: 61 THYAEHR-KIIYCSRTMSEIEKALVELESLMDYRSKELGHKEHFRGLGLTSRKNLCLHPR 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP--NIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T A ++P NIE C+F EN +P GVY+ +
Sbjct: 120 VRKERKGTVVDEKCRRMTNGQAARKAEQDPTANIELCDFHENLNTMDPENYVPVGVYSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + +++ CPYF R M+ ++++YSY YLLDPK++ +SKE+ ++++V+FDEAHN
Sbjct: 180 KLIKYCEERTMCPYFTVRRMIAMCDIMIYSYHYLLDPKISERVSKEVSRDAIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + L+ AT+ + +N++I+ + D+ RL+ EY +LV GL L
Sbjct: 240 IDNVCIESLSLDLTNDVLKRATKGANNLNEKIQEVRQVDSQRLQDEYEKLVNGLRAPDML 299
Query: 299 --PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+ +P L D+L EA+PGNIRRAEHF+ L+R ++YL+ R++ +V E P SF+
Sbjct: 300 GAEEPPVESPVLSQDLLSEAIPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVISETPNSFL 359
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
+ I++K LRFC ERL L+ TLE+++ +EF ++ I FATL+ TY GF +II
Sbjct: 360 QHLKQLTFIERKPLRFCSERLSLLVRTLEVSEIEEFTALKDIATFATLISTYEEGFVLII 419
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP++ +P+P+++ +C DAS+A+KPVFD+F SV+ITSGT+SP+D+YP++LNF V+
Sbjct: 420 EPYEIENAAVPNPIMRFTCLDASIAIKPVFDKFSSVIITSGTISPLDMYPKMLNFETVLQ 479
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
S+ M+L + PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V F
Sbjct: 480 ESYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF 539
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YRKAC GRGA+ S
Sbjct: 540 FPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAILLS 599
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD H+GR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+R
Sbjct: 600 VARGKVSEGIDFDHHFGRTVLMIGIPFQYTESRILKARLEFLREHYQIRENDFLSFDAMR 659
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQC+GRV+R K DYG+M+ AD+R++R K+ +LP WI L DA LNLSTDMA+ +
Sbjct: 660 HAAQCLGRVLRGKDDYGVMVLADRRFAR--KKGQLPKWIAQGLSDADLNLSTDMAIANTK 717
Query: 717 EFLRKMAQPYDKAGSIG 733
+FLR MAQP D G
Sbjct: 718 QFLRTMAQPTDPKDQEG 734
>gi|121701205|ref|XP_001268867.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
gi|119397010|gb|EAW07441.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
Length = 771
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/723 (50%), Positives = 509/723 (70%), Gaps = 6/723 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LK+ LDA+G+C+LEMP+GTGKT+ LLSLI +Y PE+ KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKKTLDAQGNCVLEMPSGTGKTVTLLSLIVAYQQHYPEHR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AELK L Y+T+ LG A+GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 AELKELMKYRTQQLGYTEDFRALGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++E C + EN + ++PPGV+TL L +G++ CPYF AR M+ + NV
Sbjct: 120 KKERGEDVELCIYHENLDLLEPHNLVPPGVFTLDGLLKYGEEHKQCPYFSARRMMPYCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNIDNVCIEALS+ + +L AT+ +
Sbjct: 180 IIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIEALSIDITEDSLRKATKGAN 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIR 322
+ ++I+ K++DA +L+ EY++LVEGL +++NP LP D+LKEAVPGNIR
Sbjct: 240 NLERKIQEMKSSDAEKLQNEYSKLVEGLREAEQAREEEQFIANPVLPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ + E P SF+ + I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLTFIERKPLRFCAERLTSLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + +++ +Q + FATLV TY +GF +I+EPF+ +P+P+L +C DAS+A+
Sbjct: 360 TLELINIEDYQPLQEVATFATLVATYEKGFLLILEPFESEAATVPNPILHFTCLDASIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRF SV+ITSGTLSP+++YP++L+F V+ S+ M+L R PM++TRGSDQ +
Sbjct: 420 KPVFDRFSSVIITSGTLSPLEMYPKMLDFDTVLQESYSMTLARRSFLPMIVTRGSDQAQI 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R+DPGV RNYG L++E I PDGIV FF SY YM+ I++ W GIL I +
Sbjct: 480 SSSFQIRNDPGVVRNYGNLVLEFSRITPDGIVVFFPSYLYMESIVSMWQGMGILDSIWNY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D E++LAL+ YR AC GRGA+ F VARGKV+EGIDFD HYGR V+ GVP
Sbjct: 540 KLILVETPDAQESSLALETYRTACCNGRGAILFCVARGKVSEGIDFDHHYGRAVLCIGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+
Sbjct: 600 FQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
+ KR++LP WI + ++ NLSTDMA+ A+ FLR MAQP+ G T S AD
Sbjct: 660 QK--KRNQLPKWISQAMLESETNLSTDMAVATAKNFLRTMAQPFKAKDQEGIST-WSLAD 716
Query: 743 LEK 745
LE+
Sbjct: 717 LER 719
>gi|405117928|gb|AFR92703.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. grubii H99]
Length = 773
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/730 (49%), Positives = 506/730 (69%), Gaps = 30/730 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F L D+ V FPYD +YPEQYSYM +LK LDA +
Sbjct: 1 MKFMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAGFY----------------------- 37
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
N KLIYC+RTV E+EK LAELK L Y+ +GL+SR+NLC++
Sbjct: 38 ----PNKRKLIYCSRTVPEIEKALAELKRLMVYRAEMGANDGDFRGLGLTSRRNLCLHPE 93
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPGVYTLQD 179
V + VD+ CR T+++ +P ++ C F E ++PPGVYTL D
Sbjct: 94 VSKEKKGKVVDSRCRDLTSAFACEKGRTDPGSVPLCSFHEELNNYEPGNLIPPGVYTLDD 153
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
++ +G+++G CPYF R M+ F +VV+YS+ YLLDPKVA +S EM KES+V+FDEAHNI
Sbjct: 154 VKKYGQEKGVCPYFTIRRMLPFLDVVIYSFHYLLDPKVAEQVSAEMSKESIVIFDEAHNI 213
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGN 297
DNVCIE+LS+ + R L+ A R++++++ +I K TDA +L EY +LVEGL A
Sbjct: 214 DNVCIESLSIDLTRPMLDSAARSVNKLSDKIAEIKETDAKKLEDEYAKLVEGLQEANERA 273
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
L +P L D++ EAVPGNIR+AEHF+ L+R ++YL+ R+ +V E P SF+A
Sbjct: 274 EDEDMLVSPVLSKDMVDEAVPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFLA 333
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+ I+Q+ L+F ERL SL+ TLE+T+ +E +Q + F TLV TY +GF +I+E
Sbjct: 334 HLKEITYIEQRPLKFASERLTSLVRTLELTNLEEHSALQKVAGFGTLVATYEKGFLLILE 393
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P++ +P+P+ +C D SLA+ PVFDRF SVVITSGT+SP+D+YP++L F PV+ +
Sbjct: 394 PYETEHATVPNPIFHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVMEQ 453
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
S+ M+LTR+ PMV+TRGSDQ+P+S++F++R+DP V RN+G +L+EM VPDG+V FF
Sbjct: 454 SYPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIEMARTVPDGVVAFF 513
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+ I++ W D GIL E+ +HKL+F+ET D +ET++AL NYR+AC+ GRGAV SV
Sbjct: 514 PSYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETSIALRNYREACNNGRGAVLLSV 573
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
ARGKV+EGIDFD +YGR VIMFG+P+QYT S+IL ARLE+LRD +I+E D+LTFDA+R
Sbjct: 574 ARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMRH 633
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AAQCVGRV+R K D+G+M+FADKR++R DKR+KLP WI S++ +AH NLSTD+A+ +A++
Sbjct: 634 AAQCVGRVLRGKTDWGLMVFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKK 693
Query: 718 FLRKMAQPYD 727
F+R+++QP+D
Sbjct: 694 FIRQISQPFD 703
>gi|70996012|ref|XP_752761.1| TFIIH complex helicase Rad3 [Aspergillus fumigatus Af293]
gi|66850396|gb|EAL90723.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus Af293]
gi|159131515|gb|EDP56628.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus A1163]
Length = 770
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/723 (50%), Positives = 510/723 (70%), Gaps = 6/723 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE+ KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEHR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AELK L ++++ LG A+GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 AELKELMKFRSQQLGYTEDFRALGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++E C + EN + ++PPGV+TL L +G++ CPYF AR M+ + NV
Sbjct: 120 KKERGEDVELCIYHENLDLLEPHNLVPPGVFTLDGLLKYGEEHKQCPYFSARRMMPYCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNIDNVCIEALS+ + +L ATR +
Sbjct: 180 IIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIEALSIDITEDSLRKATRGAN 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ ++I K++DA +L+ EY++LVEGL A + + +++NP LP D+LKEAVPGNIR
Sbjct: 240 NLERKISEMKSSDAEKLQNEYSKLVEGLREAEQARDEDQFIANPVLPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ + E P SF+ + I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLTFIERKPLRFCAERLTSLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + +++ +Q + FATLV TY +GF +I+EPF+ +P+PVL +C DA++A+
Sbjct: 360 TLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESETATVPNPVLHFTCLDAAIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRF SV+ITSGTLSP+++YP++L F V+ S+ M+L R PM++TRGSDQ +
Sbjct: 420 KPVFDRFSSVIITSGTLSPLEMYPKMLGFPTVLQESYTMTLARRSFLPMIVTRGSDQAQI 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R+DPGV RNYG +++E I PDGIV FF SY YM+ II+ W GIL I +
Sbjct: 480 SSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMESIISMWQGMGILDSIWNY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D E++LAL+ YR AC GRGA+ F VARGKV+EGIDFD HYGR V+ GVP
Sbjct: 540 KLILVETPDAQESSLALETYRTACCNGRGAILFCVARGKVSEGIDFDHHYGRAVLCIGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+
Sbjct: 600 FQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
+ KR++LP WI + ++ NLSTDMA+ A+ FLR MAQP+ G T S AD
Sbjct: 660 QK--KRNQLPKWISQAMLESETNLSTDMAVATAKNFLRTMAQPFKAKDQEGIST-WSLAD 716
Query: 743 LEK 745
+E+
Sbjct: 717 IER 719
>gi|340514003|gb|EGR44274.1| DNA excision repair helicase [Trichoderma reesei QM6a]
Length = 783
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/738 (49%), Positives = 506/738 (68%), Gaps = 15/738 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++++ V FPY IYPE LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFNIDNLPVLFPYPRIYPE----------TLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 50
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE KLIYC+RT+ E+EK L EL+ L Y+T LG + +GL+SRKNLC++
Sbjct: 51 QHMPEKR-KLIYCSRTMSEIEKALVELQSLMKYRTEQLGYEEEFRGLGLTSRKNLCLHPS 109
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ N++ C + +N + ++P GV++ L
Sbjct: 110 VKREKSGSIVDARCRSLTAGFVKEKKDRGENVDVCVYHDNLDLLEPHNLIPNGVWSFDAL 169
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+++ NVV++SY YLLDPK+A +SK+ K+ +VVFDEAHNID
Sbjct: 170 LRYGEEHKQCPYFTARRMMEYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNID 229
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIEALS + ++ ATR+ + + I + TD +L+ EY +LV+GL A
Sbjct: 230 NVCIEALSTDITEDSIRKATRSAQHLERRIAEMRETDQEQLQNEYEKLVQGLRAADESRQ 289
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A+++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF+A
Sbjct: 290 EDAFMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFLEYLKTRMKVRQVISETPPSFLAH 349
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ H I++K LRFC ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP
Sbjct: 350 LKEHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQALQEVATFATLVATYEKGFLLILEP 409
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
++ +P+P L +C DA++A++PVF+RF SV+ITSGT+SP+++YP++L+F V+ S
Sbjct: 410 YESDTAEVPNPTLHFTCLDAAIAIRPVFERFYSVIITSGTISPLEMYPKMLDFATVIQES 469
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R++P V RNYG LL E I PDG+V FF
Sbjct: 470 YSMTLARKSFLPMIVTRGSDQASISSSFQVRNEPSVVRNYGSLLTEFAKITPDGMVVFFP 529
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VA
Sbjct: 530 SYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVA 589
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+T++IKE DFL+FDA+R A
Sbjct: 590 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHA 649
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI L DA NLSTDMA+ AR F
Sbjct: 650 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWINQGLSDADTNLSTDMAVSAARRF 707
Query: 719 LRKMAQPYDKAGSIGRKT 736
L+ MAQP+ G T
Sbjct: 708 LKTMAQPFRSKDQEGIST 725
>gi|403412410|emb|CCL99110.1| predicted protein [Fibroporia radiculosa]
Length = 759
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/717 (51%), Positives = 508/717 (70%), Gaps = 17/717 (2%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT++LLSLI SY P KLIYC+RTV E+EK L ELK L Y+
Sbjct: 1 MPSGTGKTVSLLSLIVSYQQFYPAKR-KLIYCSRTVPEIEKALEELKRLMVYRLSSAETE 59
Query: 102 A------KILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIET 154
+GL+SRKNLC++ V + VDA CR T S V +NP +++
Sbjct: 60 EEKEKERSFYGLGLTSRKNLCIHPEVSKEKKGKVVDARCRDLTNSAVCEKGRQNPGSVDL 119
Query: 155 CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLD 214
C++ EN K +++PPG++TL D+ +G+ CPYFL R M+ F ++++YS+ YLLD
Sbjct: 120 CDWHENLGKLDPGSLIPPGIWTLADVLQYGRDNTICPYFLVRRMMPFVDIIIYSFHYLLD 179
Query: 215 PKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
PKVA +SKEM K+++VVFDEAHNIDNVCIE+LS+ + R LE A R++ ++ IE K
Sbjct: 180 PKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLSRPMLESAARSVGKLGDRIEEIK 239
Query: 275 ATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRL 334
TDA +L+ EY +LVEGL N +A++SNP LP D+LKEA+PGNIR+AEHF+ L+R
Sbjct: 240 KTDASKLQDEYAKLVEGLQEAANDEDAFMSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRF 299
Query: 335 VQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLH 394
V+YL+ R+ +V E P+SF+ + I+++ LRFC ERL SL+ TL+++ DE+
Sbjct: 300 VEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLVRTLDLSRLDEYAS 359
Query: 395 IQTICDFATLVGTYTRG-----FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRF 449
+Q + FATLV TY +G F +I+EPF+ +P+P+ L+C D ++A+KPVF+RF
Sbjct: 360 LQKVASFATLVATYEKGAIHVGFLLILEPFETDNATVPNPIFHLTCLDPAIAIKPVFERF 419
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+VVITSGT+SP+D+YP++L F PVV ++ M+LTR+ P+V+TRGSDQ+ +S++F++R
Sbjct: 420 STVVITSGTISPLDMYPKMLQFTPVVQETYAMTLTRNSFLPLVITRGSDQVAISSRFEVR 479
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+DP V RN+G +L+E IVPDGIV FF SY YM+ I+A WND GIL E+ +HKL+F+ET
Sbjct: 480 NDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVET 539
Query: 570 QDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
D ET++AL+NYR+ACD GRGAV SVARGKV+EGIDFD +YGR VIMFGVP+QYT S+
Sbjct: 540 PDANETSIALENYRRACDNGRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESR 599
Query: 630 ILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS 689
IL ARLEYLRD ++I+E +FL FDA+R AAQCVGRV+R K D+G+M+FADKR++R DKR+
Sbjct: 600 ILKARLEYLRDAYRIRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRA 659
Query: 690 KLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ-PYDKAGSIGRKTLLSQADLEK 745
KLP WI ++ + NLSTDMAL +++ F+R ++Q P + + TL D+EK
Sbjct: 660 KLPRWINQYITETASNLSTDMALTLSKLFMRTISQNPNENQTGVSLWTL---EDVEK 713
>gi|46116906|ref|XP_384471.1| hypothetical protein FG04295.1 [Gibberella zeae PH-1]
Length = 761
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/727 (50%), Positives = 509/727 (70%), Gaps = 13/727 (1%)
Query: 30 RALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKL 89
+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE KLIYC+RT+ E+EK L ELK
Sbjct: 2 QTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKR-KLIYCSRTMSEIEKALVELKS 60
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
L Y+ LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 61 LMKYRAEELGYEEEFRGLGLTSRKNLCLHPSVKREKSGAIVDARCRSLTAGFVKEKKERG 120
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
N++ C + +N + ++P GV++ D+ +G++Q CPYF AR M+Q+ NVV++SY
Sbjct: 121 ENVDVCVYHDNLDLLEPHNLIPNGVWSFDDIIRYGEEQKQCPYFTARRMMQYCNVVIFSY 180
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YLLDPK+A +SK+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR + +
Sbjct: 181 HYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQNLENK 240
Query: 270 IERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
I + + TD +L+ EY +LV+GL A +A+++NPALP D+LKEAVPGNIRRAEHF
Sbjct: 241 ISQMRDTDQEQLQNEYQKLVQGLRDADEARQEDAFMANPALPEDLLKEAVPGNIRRAEHF 300
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
+ L+R ++YL+ R++ V E P SF+A + H I++K LRFC ERL SL+ TLE+T
Sbjct: 301 IAFLKRFIEYLKTRMKVRQVISETPPSFLAHLREHTFIEKKPLRFCAERLTSLVRTLELT 360
Query: 388 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFD 447
+ +++ +Q + FATLV TY +GF +I+EPF+ +P+PVL +C DA++A+KPVFD
Sbjct: 361 NIEDYQPLQEVATFATLVATYEKGFLLILEPFESDTAEVPNPVLHFTCLDAAIAIKPVFD 420
Query: 448 RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFD 507
RF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++TRGSDQ VST F
Sbjct: 421 RFYSVIITSGTISPLEIYPKMLDFQTVIQESYAMTLARRSFMPMIVTRGSDQASVSTSFQ 480
Query: 508 MRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFI 567
+R++P V RNYG LL E I PDG+V FF SY YM+ II+ W G+L E+ ++KL+ +
Sbjct: 481 VRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGVLDEVWKYKLILV 540
Query: 568 ETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
ET D ET+LAL+ YR AC GRGAV VARGKV+EGIDFD YGR V+ GVPFQYT
Sbjct: 541 ETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTE 600
Query: 628 SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 687
S+IL ARL++LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + K
Sbjct: 601 SRILKARLQFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQK--K 658
Query: 688 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY---DKAG--SIGRKTLL---S 739
R++LP WI L+++ +NLSTDMA+ AR FLR MAQP+ D+ G + G K L+
Sbjct: 659 RTQLPKWINQGLQESDVNLSTDMAVSSARRFLRTMAQPFRAKDQEGISTWGYKDLMEHKE 718
Query: 740 QADLEKM 746
+ DLE++
Sbjct: 719 KMDLERI 725
>gi|342871641|gb|EGU74151.1| hypothetical protein FOXB_15338 [Fusarium oxysporum Fo5176]
Length = 761
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/727 (50%), Positives = 508/727 (69%), Gaps = 13/727 (1%)
Query: 30 RALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKL 89
+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE KLIYC+RT+ E+EK L ELK
Sbjct: 2 QTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKR-KLIYCSRTMSEIEKALVELKS 60
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
L Y+ LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 61 LMKYRAEQLGYEEEFRGLGLTSRKNLCLHPSVKREKSGAIVDARCRSLTAGFVKEKKERG 120
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
N++ C + +N + ++P GV++ D+ +G++ CPYF AR M+Q+ NVV++SY
Sbjct: 121 ENVDVCVYHDNLDLLEPHNLIPNGVWSFDDMIRYGEEHKQCPYFTARRMMQYCNVVIFSY 180
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YLLDPK+A +SK+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR + +
Sbjct: 181 HYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQNLENK 240
Query: 270 IERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
I + + TD +L+ EY +LV+GL A +A+++NPALP D+LKEAVPGNIRRAEHF
Sbjct: 241 ISQMRDTDQQQLQNEYEKLVQGLRDADEARQEDAFMANPALPEDLLKEAVPGNIRRAEHF 300
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
+ L+R ++YL+ R++ V E P SF+A + H I++K LRFC ERL SL+ TLE+T
Sbjct: 301 IAFLKRFIEYLKTRMKVRQVISETPPSFLAHLREHTFIEKKPLRFCAERLTSLVRTLELT 360
Query: 388 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFD 447
+ +++ +Q + FATLV TY +GF +I+EPF+ +P+PVL +C DA++A+KPVFD
Sbjct: 361 NIEDYQPLQEVATFATLVATYEKGFLLILEPFESDTAEVPNPVLHFTCLDAAIAIKPVFD 420
Query: 448 RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFD 507
RF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++TRGSDQ VST F
Sbjct: 421 RFYSVIITSGTISPLEIYPKMLDFSTVIQESYAMTLARRSFMPMIVTRGSDQASVSTSFQ 480
Query: 508 MRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFI 567
+R++P V RNYG LL E I PDG+V FF SY YM+ II+ W GIL E+ ++KL+ +
Sbjct: 481 VRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILV 540
Query: 568 ETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
ET D ET+LAL+ YR AC GRGAV VARGKV+EGIDFD YGR V+ GVPFQYT
Sbjct: 541 ETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTE 600
Query: 628 SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 687
S+IL ARL++LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + K
Sbjct: 601 SRILKARLQFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQK--K 658
Query: 688 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY---DKAG--SIGRKTLL---S 739
RS+LP WI L+++ +NLSTDMA+ AR FLR MAQP+ D+ G + G K L+
Sbjct: 659 RSQLPKWINQGLQESDVNLSTDMAVSSARRFLRTMAQPFRAKDQEGISTWGYKDLMEHKE 718
Query: 740 QADLEKM 746
+ DLE++
Sbjct: 719 KMDLERI 725
>gi|341891975|gb|EGT47910.1| hypothetical protein CAEBREN_01520 [Caenorhabditis brenneri]
Length = 714
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/695 (51%), Positives = 502/695 (72%), Gaps = 10/695 (1%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-P 100
MP+GTGKT++LLSL+ +Y++S P+ KL+YC+RT+ E+EK + E+++L++Y + G P
Sbjct: 1 MPSGTGKTVSLLSLVLAYMISYPDRLDKLVYCSRTIPEIEKCVEEMRVLYDYWEKETGMP 60
Query: 101 AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFEN 160
AKI + +S+RKNLC+N +V A ++VD+AC+K T+S VRA E+P+IE C+FFEN
Sbjct: 61 VAKI-TVAMSARKNLCINEKVAALRFGNTVDSACQKLTSSSVRAKKQEDPSIEGCDFFEN 119
Query: 161 YEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGI 220
+E A+ + GV+ L++LR G+++ CPYF AR+ + A++VVYSY Y+LDPK+A +
Sbjct: 120 FE--ANGFPMQNGVWNLENLRTLGREKKICPYFTARNAINRAHIVVYSYHYILDPKIAEL 177
Query: 221 ISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGR 280
+SK+ ++SVVVFDEAHNIDNVCIE++SV++ ++ + A + L + + R K ++ +
Sbjct: 178 VSKDFSRKSVVVFDEAHNIDNVCIESMSVAISQKNADRALQELQNLEGVVGRMKTANSEK 237
Query: 281 LRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL 338
L+ EY+RLVEGL A R + L+NP +P DILKEAVPGNIR+A HFL L+R V+Y+
Sbjct: 238 LKTEYDRLVEGLRKAERERANDERLANPCIPDDILKEAVPGNIRQANHFLLFLKRFVEYV 297
Query: 339 RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTI 398
R RL T V E P SF+ I I+++ +RFC ERL +L+ TLEITD + + +
Sbjct: 298 RHRLRTHQVLIESPASFMKDIQERMCIERRPMRFCAERLSNLVKTLEITDNGDVWALSQV 357
Query: 399 CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGT 458
TLV TY+RGFS+IIEP D +L LSCHDAS+A++PV R QSV+ITSGT
Sbjct: 358 TTLCTLVSTYSRGFSVIIEPQDGSQM----AMLTLSCHDASIAIRPVLKRHQSVIITSGT 413
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNY 518
LSP+++YP++L+F P V SF M+L R C+ P+V+ RG+DQ+ ++++F+ R+D V RNY
Sbjct: 414 LSPLEMYPKILDFDPAVVASFTMTLARPCLAPLVVARGNDQVAMTSRFEQRADVAVIRNY 473
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G L++EM S+VPDG+V FF SY YM+ +I W + I+ E+M++KL+FIET D +ET+ A
Sbjct: 474 GNLVLEMASLVPDGMVVFFTSYLYMENVIGVWYEQHIIDELMKYKLLFIETNDALETSAA 533
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L+ Y +ACD GRGAV FSVARGKV+EGIDF H GR VIM G+P+ YT S++L ARLEYL
Sbjct: 534 LEKYVEACDSGRGAVLFSVARGKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEYL 593
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
RDTF I+E DFLTFDA+R AQC+GR +RSK DYG+M+FADKR+SR DKR KLP W+ +
Sbjct: 594 RDTFNIRENDFLTFDAMRHTAQCMGRALRSKTDYGLMVFADKRFSRTDKRGKLPRWMQEY 653
Query: 699 LRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
L A NLS D A +AR +L MAQP+ K +G
Sbjct: 654 LEPASTNLSIDEAAQVARRWLTLMAQPFQKEHQLG 688
>gi|399216534|emb|CCF73221.1| unnamed protein product [Babesia microti strain RI]
Length = 790
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/782 (48%), Positives = 538/782 (68%), Gaps = 46/782 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F ++ + V+FPY +YPEQ +Y+ LKRALDA GH +LEMPTGTGKT+AL S IT+Y
Sbjct: 2 VLFWVDGIQVFFPYSKVYPEQLAYLRCLKRALDAGGHAVLEMPTGTGKTVALFSFITAYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
++ P++P KLIYCTRT+ EMEK L EL+ + Y+++ L ILAIGL+SR+NLC++ +
Sbjct: 62 MAHPQSP-KLIYCTRTIQEMEKALMELEKVIEYRSQQLNTPTDILAIGLASRRNLCIHPK 120
Query: 121 VLAAENRDSVDAACRKRTASWVRA-----LAAEN----PNIET------CEFFENYEKAA 165
V + + VD CRK T W R EN P+IE+ C +FE+ E+
Sbjct: 121 VSLVADGNQVDDECRKLTVMWQRVDKINVTTCENVQEIPDIESLNNSGLCGYFEHVEQFW 180
Query: 166 SAAVLPPGVYTLQDLRAF---------GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPK 216
LP GVYTL+ L+ + GK+ CPYF+AR ++ AN++V++YQYLLDPK
Sbjct: 181 LPEYLPKGVYTLEKLKEYSKNFVHPFTGKKCSPCPYFVARKCLERANILVFNYQYLLDPK 240
Query: 217 VAGII-------------SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
V+ + K ++ VVVFDEAHNID+VCIEALSV + LEGA+RNL
Sbjct: 241 VSKTVLYNLIRFKDNFDNIKRDKEPFVVVFDEAHNIDDVCIEALSVELNLAILEGASRNL 300
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGLALR-GNLPNAWLSNPALPSDILKEAVPGNIR 322
++Q+IER + D L++EY LV + + + +P +LK+ +PGNIR
Sbjct: 301 LYLSQQIERMEREDMETLKSEYQMLVSEIVDKLDDFTLEDFMSPVWTGQMLKKYMPGNIR 360
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
+A HF+ ++ +V YL+ ++ ++ +GP++F+ +++ GID + FCY RL L+
Sbjct: 361 KATHFIKFMQSIVCYLKEYIQVPEIKSQGPLTFLHNLSTEIGIDVSSFNFCYNRLKLLIT 420
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TL+ T ++ + + DF TL+ TY++GF +I+EPF E + I DP+L LSC DASLA+
Sbjct: 421 TLKFTSINDLSPLFIVADFCTLIVTYSKGFIVIVEPFPEAV-GIYDPILHLSCLDASLAI 479
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
K VF+ F+SV++TSGT+SP++ YP++L+F PV++ SF MSL R CICP++++RGS+Q+P+
Sbjct: 480 KHVFNTFKSVILTSGTISPLEFYPKILDFTPVLTESFPMSLDRKCICPIIVSRGSNQVPI 539
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+TKFD R D V R+YG L+V++ VPDG+VCFF SY YM+ I++ W +SGI+ IM++
Sbjct: 540 TTKFDARDDQNVLRSYGSLIVDLSKHVPDGMVCFFPSYLYMEHILSAWYESGIIANIMKN 599
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+F+ET+DVV T LAL NYRKACD GRGA+FFS+ARGKVAEGIDFDRHYGR V++ GVP
Sbjct: 600 KLIFMETKDVVTTILALHNYRKACDYGRGAIFFSIARGKVAEGIDFDRHYGRCVVVIGVP 659
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQY+LS++L ARLE++R + I+E +FL FDA+RQAAQCVGR+IR+K+D+G++IFAD
Sbjct: 660 FQYSLSRVLKARLEFMRIHYGIQESEFLNFDAMRQAAQCVGRIIRNKSDFGLIIFAD--C 717
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SR D+R LP WIL HL + L L+T+MA+ + + FLR MAQ Y+ + R T L Q
Sbjct: 718 SRSDRRMALPPWILKHLDASSLCLNTEMAISVTKTFLRNMAQNYEPS----RFTRLDQET 773
Query: 743 LE 744
L+
Sbjct: 774 LK 775
>gi|212531953|ref|XP_002146133.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
gi|210071497|gb|EEA25586.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
Length = 794
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/728 (49%), Positives = 505/728 (69%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M FK++++ V FPY IYPEQ+ YM +LK+ALDA GHC+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MRFKIDELEVLFPYPKIYPEQWQYMCDLKKALDASGHCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
++ KLIYC+RT+ E++K L ELK L Y+ LG +GLSSRKNLC++
Sbjct: 61 QHHGDSR-KLIYCSRTMSEIDKALHELKALMKYRASQLGYTEDFRGLGLSSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TAS+V ++ETC + +N + ++ PGV+T DL
Sbjct: 120 VKREKSGAVVDARCRSLTASFVVQKKERGEDVETCTYHDNLDLLEPHNLIEPGVFTFGDL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +++ CPYF R M+ + NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LRYCQEKVTCPYFTVRRMLPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--RGNL 298
NV IE+LS+ + +L A+R + ++IE K++DA +L++EY +LVEGL
Sbjct: 240 NVAIESLSIDLTEDSLRKASRGAKNLERKIEEMKSSDAEKLQSEYTKLVEGLKATEEARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +SNP LP D+L EAVPGNIRRAEHF+ L+R +QYL R++ + E SF+
Sbjct: 300 EDLIMSNPVLPQDLLSEAVPGNIRRAEHFIAFLQRFIQYLMTRMKVTHTISETTPSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I+ K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY RGF +I+EP
Sbjct: 360 LRELVFIEAKPLRFCSERLTSLVRTLELMNIEDYQPLQEVAMFATLVSTYDRGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL L+C DA++A +PV +RF S+V+TSGTL+P+D++P++LNF PV+ S
Sbjct: 420 FESEAATVPNPVLHLACLDAAIAFRPVVERFSSIVVTSGTLTPLDMFPKMLNFTPVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F R+DP RN+G LL++ IVPDGIV FF
Sbjct: 480 YTMTLARRSFLPMIVTRGSDQSQISSSFQTRNDPSNLRNFGSLLLDFAKIVPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ + W+ GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ SVA
Sbjct: 540 SYLYMESTLHVWSGMGILDMIWNYKLILVETPDAQESSLALETYRTACCNGRGAILMSVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEG+DFD YGR VI GVPFQYT S+IL ARLE+LR+ + I+E DFL+FDA+R A
Sbjct: 600 RGKVAEGVDFDHQYGRAVICIGVPFQYTESRILRARLEFLRENYGIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QC+GRVIR K DYG+M+ ADKR++R KRS+LP WI ++ ++ +NLSTDMA+ A+ F
Sbjct: 660 SQCLGRVIRGKDDYGIMVLADKRFAR--KRSQLPKWISQNILESEVNLSTDMAVATAKNF 717
Query: 719 LRKMAQPY 726
LR MAQP+
Sbjct: 718 LRTMAQPF 725
>gi|363751190|ref|XP_003645812.1| hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889446|gb|AET38995.1| Hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
Length = 756
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/738 (48%), Positives = 511/738 (69%), Gaps = 11/738 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY YM +LK+ LD G+ +LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVIFPYPKIYPEQYQYMCDLKKTLDIGGNSILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL+ L +Y+ + L + +GL+SRKNLC++ R
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALVELESLMDYRAKELEYQEEFRGLGLTSRKNLCLHPR 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAEN--PNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V VD CR+ T + ++ N+E CE+ EN LP GVY+ +
Sbjct: 120 VSKERKGSVVDEKCRRMTNGQAKTKKEQDIEANVELCEYHENMYNYQPEEYLPLGVYSFE 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + + + CPYF R M+ N+++YSY YLLDP++ +S+E+ + ++V+FDEAHN
Sbjct: 180 KLIKYCEDKTICPYFTVRRMISMCNIIIYSYHYLLDPRIEERVSREISQNAIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IDNVCIE+LS+ + + L+ A+R + + ++++ + D +L+ EY LV+GL L
Sbjct: 240 IDNVCIESLSLDLTKDLLKRASRGANALGKKVDEVRKVDTMKLQQEYQDLVKGLRANDIL 299
Query: 299 ---PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ P L D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ +V E P SF
Sbjct: 300 DPDEEPLIPTPVLSRDVLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVISETPNSF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ + I++K LRFC ERL L+ TLE+ + ++F ++ I FATL+ TY GF +I
Sbjct: 360 LHHLKQLTFIERKPLRFCSERLSLLVRTLEVDEIEDFNALKDIATFATLISTYESGFLLI 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP++ +P+P+++ +C DAS+A+KPVF+RF SV+ITSGT+SP+D+YP++LNF VV
Sbjct: 420 IEPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLNFGTVV 479
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S+ M+L PM++T+GSDQ+ +S++F++R+DP + RNYG +LVE I PDG+V
Sbjct: 480 QKSYSMTLAEKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVV 539
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ II+TW GIL E+ ++KL+ +ET D ET+LAL+ YRKAC GRGA+
Sbjct: 540 FFPSYLYMESIISTWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAILM 599
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGK++EGIDFD+HYGR V+M G+PFQYT S+IL ARLE+LR+ +QI+E DFL+FDA+
Sbjct: 600 SVARGKISEGIDFDQHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAM 659
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AAQC+GRV+R K DYG+M+ AD+R+SR K+S+LP WIL L DA LNLSTDMA+
Sbjct: 660 RHAAQCLGRVLRGKDDYGVMVLADRRFSR--KKSQLPKWILQGLSDADLNLSTDMAIANT 717
Query: 716 REFLRKMAQ---PYDKAG 730
++FLR MAQ P D G
Sbjct: 718 KQFLRTMAQASDPKDHEG 735
>gi|38455521|gb|AAR20860.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/667 (52%), Positives = 479/667 (71%), Gaps = 3/667 (0%)
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AEL+ L Y RH + LSSRKN+C++ V +VD C TAS++R
Sbjct: 1 AELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRE 60
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ C++FE + + LP GVY++ DL+ +G+ + WCPYFLAR+ + A++
Sbjct: 61 RHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHI 120
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNIDNVCI+++SV + R+T+E +T L+
Sbjct: 121 VVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALN 180
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + ++ + D RL EY R+V+GL A + L+NP LP+D+L E VPGNIR
Sbjct: 181 HLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIR 240
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A+HFL LRR ++Y++ RL +V +E P F+ I++ I++K LRFC ERL SL+
Sbjct: 241 NADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDISSKICIERKPLRFCAERLSSLLR 300
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEI+D E+ + I FATLV TYT+GF+IIIEPFD++ P + +P+L SC D+S+A+
Sbjct: 301 TLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAM 360
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
PVF RFQ+VVITSGTLSP+D+YP++L+F PVV SF M+L R C+ PM++++G+DQ+ +
Sbjct: 361 APVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTI 420
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG+LLVE+ VPDGIVCFF SY Y++ ++A+W D GI+ ++++
Sbjct: 421 SSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRY 480
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET+ AL NY KACDCGRGAV +VARGKV+EG+DFD HYGR V+MFG+P
Sbjct: 481 KLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIP 540
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+
Sbjct: 541 YVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRF 600
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SRHDKRS+LP WI HL D+ NLST+ A+ +AR +LR+MAQP+ + +G +LL+ A
Sbjct: 601 SRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRWLRRMAQPFTREDQLG-ISLLTLAQ 659
Query: 743 LEKMTND 749
LE M +
Sbjct: 660 LENMEQE 666
>gi|38455500|gb|AAR20847.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455503|gb|AAR20849.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455507|gb|AAR20851.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455515|gb|AAR20856.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455523|gb|AAR20861.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/667 (52%), Positives = 479/667 (71%), Gaps = 3/667 (0%)
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AEL+ L Y RH + LSSRKN+C++ V +VD C TAS++R
Sbjct: 1 AELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRE 60
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ C++FE + + LP GVY++ DL+ +G+ + WCPYFLAR+ + A++
Sbjct: 61 RHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHI 120
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNIDNVCI+++SV + R+T+E +T L+
Sbjct: 121 VVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALN 180
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + ++ + D RL EY R+V+GL A + L+NP LP+D+L E VPGNIR
Sbjct: 181 HLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIR 240
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A+HFL LRR ++Y++ RL +V +E P F+ I++ I++K LRFC ERL SL+
Sbjct: 241 NADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDISSKICIERKPLRFCAERLSSLLR 300
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEI+D E+ + I FATLV TYT+GF+IIIEPFD++ P + +P+L SC D+S+A+
Sbjct: 301 TLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAM 360
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
PVF RFQ+VVITSGTLSP+D+YP++L+F PVV SF M+L R C+ PM++++G+DQ+ +
Sbjct: 361 APVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTI 420
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG+LLVE+ VPDGIVCFF SY Y++ ++A+W D GI+ ++++
Sbjct: 421 SSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRY 480
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET+ AL NY KACDCGRGAV +VARGKV+EG+DFD HYGR V+MFG+P
Sbjct: 481 KLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIP 540
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+
Sbjct: 541 YVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRF 600
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SRHDKRS+LP WI HL D+ NLST+ A+ +AR +LR+MAQP+ + +G +LL+ A
Sbjct: 601 SRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRWLRRMAQPFTREDQLG-ISLLTLAQ 659
Query: 743 LEKMTND 749
LE M +
Sbjct: 660 LENMEQE 666
>gi|242774370|ref|XP_002478428.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
gi|218722047|gb|EED21465.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
Length = 795
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/728 (49%), Positives = 503/728 (69%), Gaps = 5/728 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M FK++++ V FPY IYPEQ+ YM +LK+ALDA GHC+LEMP+GTGKT+ LLSLI +Y
Sbjct: 1 MRFKIDEIEVLFPYPKIYPEQWQYMCDLKKALDAGGHCVLEMPSGTGKTVTLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
++ KLIYC+RT+ E++K L ELK L Y+ LG +GLSSRKNLC++
Sbjct: 61 QHHGDS-RKLIYCSRTMSEIDKALHELKALMKYRALELGHTEDFRGLGLSSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TAS+V ++ETC + +N + ++ PGV+T DL
Sbjct: 120 VKREKSGTVVDARCRSLTASFVAQKKERGEDVETCTYHDNLDLLEPHNLIEPGVFTFSDL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ +++ CPYF R M+ + NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNID
Sbjct: 180 LRYCQEKVTCPYFTVRRMLPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--RGNL 298
NV IE+LS+ + +L A+R + ++IE K +DA +L++EY +LVEGL
Sbjct: 240 NVAIESLSIDLTEDSLRKASRGAKNLERKIEEMKTSDAEKLQSEYTKLVEGLKATEEARD 299
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +SNP LP D+L EAVPGNIRRAEHF+ L+R +QYL R++ + E SF+
Sbjct: 300 EDLIMSNPVLPQDLLSEAVPGNIRRAEHFIAFLQRFIQYLMTRMKVTHTISETTPSFLQH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I+ K L+FC ERL SL+ TLE+ + +++ +Q + FATLV TY RGF +I+EP
Sbjct: 360 LRELVFIEAKPLKFCSERLTSLVRTLELMNIEDYQPLQEVAMFATLVSTYDRGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL L+C DA++A +PV +RF S+V+TSGTL+P+D++P++LNF PV+ S
Sbjct: 420 FESEAATVPNPVLHLACLDAAIAFRPVCERFSSIVVTSGTLTPLDMFPKMLNFTPVLQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F R+DP RNYG LL++ IVPDGIV FF
Sbjct: 480 YTMTLARRSFLPMIVTRGSDQSQISSSFQTRNDPSNLRNYGTLLLDFAKIVPDGIVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ + W+ GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ SVA
Sbjct: 540 SYLYMESTLHVWSGMGILDMIWNYKLILVETPDAQESSLALETYRTACCNGRGAILMSVA 599
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKVAEG+DFD YGR VI GVPFQYT S+IL ARLE+LR+ + I+E DFL+FDA+R A
Sbjct: 600 RGKVAEGVDFDHQYGRAVICIGVPFQYTESRILRARLEFLRENYGIRENDFLSFDAMRHA 659
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QC+GRVIR K DYG+M+ ADKR++R KR++LP WI + ++ +NLSTDMA+ A+ F
Sbjct: 660 SQCLGRVIRGKDDYGIMVLADKRFAR--KRNQLPKWINQTILESEVNLSTDMAVATAKNF 717
Query: 719 LRKMAQPY 726
LR MAQP+
Sbjct: 718 LRTMAQPF 725
>gi|302901601|ref|XP_003048472.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729405|gb|EEU42759.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 761
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/727 (49%), Positives = 508/727 (69%), Gaps = 13/727 (1%)
Query: 30 RALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKL 89
+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE KLIYC+RT+ E+EK L ELK
Sbjct: 2 QTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKR-KLIYCSRTMSEIEKALVELKS 60
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
L Y+ LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 61 LMKYRAEELGYEEEFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKDRG 120
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
N++ C + +N + ++P GV++ D+ +G++ CPYF AR M+Q+ NVV++SY
Sbjct: 121 ENVDVCVYHDNLDLLEPHNLIPNGVWSFDDIIRYGEEHKQCPYFTARRMMQYCNVVIFSY 180
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YLLDPK+A +SK+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR +
Sbjct: 181 HYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQNLENR 240
Query: 270 IERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
I + + TD +L+ EY +LV+GL A +A+++NPALP+D+L+EAVPGNIRRAEHF
Sbjct: 241 IAQMRDTDQEQLQNEYQKLVQGLRDAEEARQEDAFMANPALPADLLQEAVPGNIRRAEHF 300
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
+ L+R ++YL+ R++ V E P SF+A + H I++K LRFC ERL SL+ TLE+T
Sbjct: 301 VAFLKRFIEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLTSLVRTLELT 360
Query: 388 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFD 447
+ +++ +Q + FATLV TY +GF +I+EP++ +P+P+L +C DA++A++PVF+
Sbjct: 361 NIEDYQPLQEVATFATLVSTYEKGFLLILEPYESDTAEVPNPILHFTCLDAAIAIRPVFE 420
Query: 448 RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFD 507
RF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++TRGSDQ VST F
Sbjct: 421 RFYSVIITSGTISPLEIYPKMLDFSTVIQESYSMTLARRSFLPMIVTRGSDQASVSTSFQ 480
Query: 508 MRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFI 567
+R++P V RNYG LL E I PDG+V FF SY YM+ II+ W GIL E+ ++KL+ +
Sbjct: 481 VRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILV 540
Query: 568 ETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
ET D ET+LAL+ YR AC GRGAV VARGKV+EGIDFD YGR V+ GVPFQYT
Sbjct: 541 ETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTE 600
Query: 628 SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 687
S+IL ARL++LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + K
Sbjct: 601 SRILKARLQFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQK--K 658
Query: 688 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY---DKAG--SIGRKTLL---S 739
R++LP WI L++A +NLSTDMA+ AR FLR MAQP+ D+ G + G K L+
Sbjct: 659 RTQLPKWINQGLQEADVNLSTDMAVSSARRFLRTMAQPFRAKDQEGISTWGYKDLMEHKE 718
Query: 740 QADLEKM 746
+ DLE++
Sbjct: 719 KMDLERI 725
>gi|341038606|gb|EGS23598.1| hypothetical protein CTHT_0002930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 780
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/726 (50%), Positives = 505/726 (69%), Gaps = 10/726 (1%)
Query: 24 YMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKT 83
YM +LK+ LDA G+C+LEMP+GTGKTI LLSLI +Y E+ KLIYC+RT+ E+EK
Sbjct: 7 YMCDLKKTLDAGGNCVLEMPSGTGKTITLLSLIVAYQQHYAEHR-KLIYCSRTMSEIEKA 65
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
L ELK L ++ LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 66 LVELKALMKFRAERLGYVEEFRGLGLTSRKNLCLHPSVKREKSGTIVDARCRSLTAGFVK 125
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+++ C + +N + ++P G++TL +L +G++ CPYF AR M+Q+ N
Sbjct: 126 EKKQRGEDVDVCIYHDNLDLLEPHNLIPNGIWTLDNLLKYGEEHKQCPYFTARRMLQYCN 185
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
VV+YSY YLLDPK+A +S+++ +S+VVFDEAHNIDNVCIEALS + ++L ATR
Sbjct: 186 VVIYSYHYLLDPKIAERVSRDLSSDSIVVFDEAHNIDNVCIEALSTDITEESLRRATRGA 245
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGLALRGN----LPNAWLSNPALPSDILKEAVPG 319
+ I K TD +L+ EY +LVEGL RGN ++++++P LP D+LKEAVPG
Sbjct: 246 QNLENRINEMKETDQQKLQDEYEKLVEGL--RGNDDGTREDSFMTSPVLPQDLLKEAVPG 303
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
NIRRAEHF+ LRR ++YL+ R++ V E P SF+A + + I++K LR+C ERL S
Sbjct: 304 NIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEYTFIEKKPLRWCAERLTS 363
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP++ +P+PVL C DA+
Sbjct: 364 LVRTLELTNIEDYHALQEVATFATLVATYEKGFLLILEPYESDTAEVPNPVLHFCCLDAA 423
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
+A+KPVFD+F++V+ITSGT+SP+++YP++LNF VV S+ M+L R P+++TRGSDQ
Sbjct: 424 IAIKPVFDKFRNVIITSGTISPLEMYPKMLNFTTVVQESYSMTLARRSFLPLIVTRGSDQ 483
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
+ST F +R++P V RNYG LL E I PDG+V FF SY YM+ II+ W GIL E+
Sbjct: 484 ASISTGFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEV 543
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++KL+ +ET D ET+LAL+ YR AC GRGAV VARGKV+EGIDFD YGR V+
Sbjct: 544 WKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCI 603
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVPFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD
Sbjct: 604 GVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGLMVLAD 663
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLS 739
+R+ + KR++LP WI L DA NLSTDMA+ AR FL+ MAQP+ G T S
Sbjct: 664 RRFQK--KRNQLPKWIAQALLDADTNLSTDMAVSSARRFLKTMAQPFKAKDQEGIST-WS 720
Query: 740 QADLEK 745
DL++
Sbjct: 721 LEDLKR 726
>gi|38455510|gb|AAR20853.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/667 (52%), Positives = 478/667 (71%), Gaps = 3/667 (0%)
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AEL+ L Y RH + LSSRKN+C++ V +VD C TAS++R
Sbjct: 1 AELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRE 60
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ C++FE + + LP GVY++ DL+ +G+ + WCPYFLAR+ + A++
Sbjct: 61 RHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHI 120
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNIDNVCI+++SV + R+T+E +T L+
Sbjct: 121 VVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALN 180
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + ++ + D RL Y R+V+GL A + L+NP LP+D+L E VPGNIR
Sbjct: 181 HLTKLVQDIREEDTNRLNEXYQRMVQGLKDASVQRXTDMILANPVLPNDVLTEVVPGNIR 240
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A+HFL LRR ++Y++ RL +V +E P F+ I++ I++K LRFC ERL SL+
Sbjct: 241 NADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDISSKICIERKPLRFCAERLSSLLR 300
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEI+D E+ + I FATLV TYT+GF+IIIEPFD++ P + +P+L SC D+S+A+
Sbjct: 301 TLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAM 360
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
PVF RFQ+VVITSGTLSP+D+YP++L+F PVV SF M+L R C+ PM++++G+DQ+ +
Sbjct: 361 APVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTI 420
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG+LLVE+ VPDGIVCFF SY Y++ ++A+W D GI+ ++++
Sbjct: 421 SSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRY 480
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIETQD ET+ AL NY KACDCGRGAV +VARGKV+EG+DFD HYGR V+MFG+P
Sbjct: 481 KLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIP 540
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+
Sbjct: 541 YVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRF 600
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SRHDKRS+LP WI HL D+ NLST+ A+ +AR +LR+MAQP+ + +G +LL+ A
Sbjct: 601 SRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRWLRRMAQPFTREDQLG-ISLLTLAQ 659
Query: 743 LEKMTND 749
LE M +
Sbjct: 660 LENMEQE 666
>gi|347831219|emb|CCD46916.1| similar to DNA repair helicase RAD3 [Botryotinia fuckeliana]
Length = 770
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/719 (50%), Positives = 502/719 (69%), Gaps = 7/719 (0%)
Query: 30 RALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKL 89
R LDA GHC+LEMP+GTGKTI+LLSLI +Y PE+ KLIYC+RT+ E+EK LAELK
Sbjct: 2 RTLDAGGHCVLEMPSGTGKTISLLSLIVAYQQYYPEHR-KLIYCSRTMSEIEKALAELKA 60
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
L Y+ LG +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 61 LMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKERG 120
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
++ C + +N + ++P GV+TL + +G++ CPYF +R M+ F NV++YSY
Sbjct: 121 EDVPVCIYHDNLDLLEPHNLIPNGVWTLDGIMRYGEEHKQCPYFTSRRMMSFCNVIIYSY 180
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YLLDPK+A +SKE+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR +
Sbjct: 181 HYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITDDSLRRATRGAMNLESR 240
Query: 270 IERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
I + +D+ +L+ EY +LVEGL A +A++SNPALP D+LKEAVPGNIRRAEHF
Sbjct: 241 ISDLRDSDSEKLKDEYAKLVEGLRGADEARAEDAFMSNPALPDDLLKEAVPGNIRRAEHF 300
Query: 328 LHVLRRLVQYLRG-RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEI 386
+ L+R ++YL+ R++ V E P SF+A + + I++K LRFC ERL SL+ TLE+
Sbjct: 301 VVFLKRFIEYLKKTRMKVRQVISETPASFLAHLKEYTYIEKKPLRFCAERLTSLVRTLEL 360
Query: 387 TDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
T+ +++ +Q + FATLV TY +GF +I+EP++ +P+PVL +C DA++A+KPVF
Sbjct: 361 TNIEDYQPLQEVATFATLVATYEKGFLLILEPYESDTAEVPNPVLHFTCLDAAIAIKPVF 420
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+RF SV+ITSGT+SP+++YP++LNF VV S+ M+L R PM++TRGSDQ+ +S+ F
Sbjct: 421 ERFSSVIITSGTISPLEMYPKMLNFECVVQESYPMTLARRSFLPMIVTRGSDQVAISSGF 480
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
+R++P V RNYG LL EM + PDG+V FF SY YM+ II+ W GIL E+ ++KL+
Sbjct: 481 QVRNEPAVVRNYGNLLTEMSKLTPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLIL 540
Query: 567 IETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
+ET D ET+LAL+ YR AC GRGA+ VARGKV+EGIDFD YGR V+ GVPFQYT
Sbjct: 541 VETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYT 600
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
S+IL ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ +
Sbjct: 601 ESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFLK-- 658
Query: 687 KRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
KR++LP WI + D+ +NLSTDMA+ A++FLR MAQP+ G T S DLEK
Sbjct: 659 KRTQLPKWINQAILDSEVNLSTDMAVGSAKKFLRNMAQPFKAKDQEGIST-WSLQDLEK 716
>gi|358399042|gb|EHK48385.1| hypothetical protein TRIATDRAFT_214371 [Trichoderma atroviride IMI
206040]
Length = 769
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/714 (49%), Positives = 496/714 (69%), Gaps = 5/714 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L Y+ LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 VELQSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
N++ C + +N + ++P GV++ L +G++ CPYF AR M+Q+ NV
Sbjct: 120 KKDRGENVDVCVYHDNLDLLEPHNLIPNGVWSFDALLKYGEEHKQCPYFTARRMMQYCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
V++SY YLLDPK+A ++K+ K+ +VVFDEAHNIDNVCIE+LS + ++ ATR+
Sbjct: 180 VIFSYHYLLDPKIAERVTKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSIRKATRSAQ 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + I + TD +L+ EY +LV+GL A +A+++NPALP D+LKEAVPGNIR
Sbjct: 240 HLERRIAEMRETDQEQLQNEYEKLVQGLREADESRQEDAFMANPALPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ V E P+SF+A + H I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFLEYLKTRMKVRQVISETPLSFLAHLKEHTFIERKPLRFCAERLTSLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+ + +++ +Q + FATLV TY +GF +I+EP++ +P+P L +C DA++A+
Sbjct: 360 TLELMNIEDYQALQEVATFATLVATYEKGFLLILEPYESDTAEVPNPTLHFTCLDAAIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
+PVF+RF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++TRGSDQ V
Sbjct: 420 RPVFERFYSVIITSGTISPLEMYPKMLDFATVIQESYSMTLARRSFLPMIVTRGSDQASV 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R++P V RNYG LL E I PDG+V FF SY YM+ II+ W GIL E+ ++
Sbjct: 480 SSSFQVRNEPSVVRNYGNLLTEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWKY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D ET+LAL+ YR AC GRGA+ VARGKV+EGIDFD YGR V+ GVP
Sbjct: 540 KLILVETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+
Sbjct: 600 FQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
+ KR++LP WI L DA NLSTDMA+ AR FL+ MAQP+ G T
Sbjct: 660 QK--KRTQLPKWINQGLSDADTNLSTDMAVSSARRFLKTMAQPFRSKDQEGIST 711
>gi|38455518|gb|AAR20858.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/667 (52%), Positives = 475/667 (71%), Gaps = 3/667 (0%)
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AEL+ L Y RH + LSSRKN+C++ V +VD C TAS++R
Sbjct: 1 AELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRE 60
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ C++FE + + LP GVY++ DL+ +G+ + WCPYFLAR+ + A++
Sbjct: 61 RHEMDTETPICQYFEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHI 120
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKEM +ES VVFDEAHNIDNVCI+++SV + R+T+E +T L+
Sbjct: 121 VVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALN 180
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + ++ + D RL EY R+V+GL A + L+NP LP+D+L E VPGNIR
Sbjct: 181 HLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIR 240
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A+HFL LRR ++Y++ RL +V +E P F+ I++ I++K LRFC ERL SL+
Sbjct: 241 NADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKDISSKICIERKPLRFCAERLSSLLR 300
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLEI+D E+ + I FATLV TYT+GF+IIIEPFD++ P + +P+L SC D+S+A+
Sbjct: 301 TLEISDLTEYGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTVSNPILHFSCLDSSIAM 360
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
PVF RFQ+VVITSGTLSP+D+YP++L+F PVV SF M+L R C+ PM++++G+DQ+ +
Sbjct: 361 APVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTI 420
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+KF+ R D V RNYG+LLVE+ VPDGIVCFF SY Y++ ++A+W D GI+ ++++
Sbjct: 421 SSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQGIVDTLLRY 480
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+FIET D ET+ AL NY KACDCGRGAV +VARGKV+EG+DFD HYGR V+MFG+P
Sbjct: 481 KLLFIETXDNAETSYALMNYVKACDCGRGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIP 540
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R AAQCVGR +R K DYG+MIFADKR+
Sbjct: 541 YVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRF 600
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
SRHDKRS+LP WI H D+ NLST+ A+ +AR +LR+MAQP + +G LL+ A
Sbjct: 601 SRHDKRSRLPKWIQEHXVDSFCNLSTEEAVQLARRWLRRMAQPXTREDQLG-IXLLTLAQ 659
Query: 743 LEKMTND 749
LE M +
Sbjct: 660 LENMEQE 666
>gi|358380117|gb|EHK17796.1| hypothetical protein TRIVIDRAFT_214193 [Trichoderma virens Gv29-8]
Length = 763
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/709 (49%), Positives = 493/709 (69%), Gaps = 5/709 (0%)
Query: 30 RALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKL 89
+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE KLIYC+RT+ E+EK L EL+
Sbjct: 2 QTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKR-KLIYCSRTMSEIEKALVELQS 60
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
L Y+ LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 61 LMKYRAEQLGYEEEFRGLGLTSRKNLCLHPSVKREKSGSIVDARCRSLTAGFVKEKKDRG 120
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
N++ C + +N + ++P GV++ L +G++ CPYF AR M+++ NVV++SY
Sbjct: 121 ENVDVCTYHDNLDLLEPHNLIPNGVWSFDALLKYGEEHKQCPYFTARRMMEYCNVVIFSY 180
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YLLDPK+A +SK+ K+ +VVFDEAHNIDNVCIE+LS + ++ ATR+ + +
Sbjct: 181 HYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSIRKATRSAQHLERR 240
Query: 270 IERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
I + TD +L+ EY +LV+GL A +A+++NPALP D+LKEAVPGNIRRAEHF
Sbjct: 241 IAEMRETDQEQLQNEYEKLVQGLREADESRQEDAFMANPALPDDLLKEAVPGNIRRAEHF 300
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
+ L+R ++YL+ R++ V E P SF+A + H I++K LRFC ERL SL+ TLE+T
Sbjct: 301 VAFLKRFLEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLTSLVRTLELT 360
Query: 388 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFD 447
+ +++ +Q + FATLV TY +GF +I+EP++ +P+P L +C DA++A++PVF+
Sbjct: 361 NIEDYQALQEVATFATLVATYEKGFLLILEPYESDTAEVPNPTLHFTCLDAAIAIRPVFE 420
Query: 448 RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFD 507
RF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++TRGSDQ VS+ F
Sbjct: 421 RFYSVIITSGTISPLEMYPKMLDFSTVIQESYSMTLARRSFLPMIVTRGSDQASVSSSFQ 480
Query: 508 MRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFI 567
+R++P V RNYG LL E I PDG+V FF SY YM+ II+ W GIL E+ ++KL+ +
Sbjct: 481 VRNEPSVVRNYGNLLTEFARITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILV 540
Query: 568 ETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
ET D ET+LAL+ YR AC GRGA+ VARGKV+EGIDFD YGR V+ GVPFQYT
Sbjct: 541 ETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTE 600
Query: 628 SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 687
S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + K
Sbjct: 601 SRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQK--K 658
Query: 688 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
R++LP WI L+DA NLSTDMA+ AR FL+ MAQP+ G T
Sbjct: 659 RTQLPKWINQGLQDADTNLSTDMAVSSARRFLKTMAQPFRSKDQEGIST 707
>gi|119186659|ref|XP_001243936.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 757
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/747 (48%), Positives = 504/747 (67%), Gaps = 44/747 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+Y+ +LK+ LD GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P + KLIYC+RT+ E+EK L EL+ L Y+ + LG A+GL+SRKNLC++
Sbjct: 61 QHYPSH-RKLIYCSRTMSEIEKALTELRELMKYREQQLGYTEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V EK+ + ++PPGV+TL L
Sbjct: 120 V--------------------------------------RREKSEPSNLVPPGVFTLDGL 141
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 142 IRYGEQHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 201
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R + + +I+ K +DA +L+ EY +LVEGL A +
Sbjct: 202 NVCIESLSIDITEDSLRKAGRGANNLGHKIDEMKRSDAAKLQKEYEKLVEGLREADQARE 261
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 262 EDQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHAISETPLSFLSH 321
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +E+ +Q I FATLV TY +GF +I+EP
Sbjct: 322 LKDLTYIERKPLRFCAERLTSLVRTLELMNIEEYRPLQEIATFATLVSTYEKGFLLILEP 381
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+PVL +C DA++A+KPVF+RF SV+ITSGTLSP+++YP++L F V+ S
Sbjct: 382 FESDTATVPNPVLHFTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLGFQTVLQES 441
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDGIV FF
Sbjct: 442 YSMTLARRSFLPMIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFP 501
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ VA
Sbjct: 502 SYLYMESIISMWQGMGILDSIWNYKLILVETPDSQESSLALETYRTACCNGRGAILLCVA 561
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGKV+EGIDFD HYGR V+ GVPFQYT S IL ARL ++ + ++I+E DFL+FDA+R A
Sbjct: 562 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESPILKARLRFMLENYRIREDDFLSFDAMRHA 621
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI ++ ++ NLSTDMA+ A+ F
Sbjct: 622 AQCLGRVLRGKDDYGIMVLADRRFQK--KRNQLPKWISQNILESETNLSTDMAVATAKSF 679
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEK 745
LR MAQP+ G T S ADLE+
Sbjct: 680 LRTMAQPFKAKDQEGIST-WSLADLER 705
>gi|189188692|ref|XP_001930685.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972291|gb|EDU39790.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 772
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/722 (50%), Positives = 501/722 (69%), Gaps = 6/722 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LKR LD GHC+LEMP+GTGKT++LLSLI +Y PE KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEKR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
AELK L Y+T LG +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 AELKALMKYRTTELGYEEDFRGLGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+E C + EN + ++PPGV+T + +G+QQ CPYF AR M+ NV
Sbjct: 120 KKERGEPVELCVYHENLDLLEPHNLIPPGVWTFDGMLKYGEQQKQCPYFTARRMMPHCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNIDNVCIE+LS+ + L AT+ ++
Sbjct: 180 IIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKATKGVN 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
++++I K++DA +L+ EY +LVEGL A +A+++NPALP D+L EAVPGNIR
Sbjct: 240 NLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARNEDAFMANPALPDDLLTEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+R ++YL+ R++ NV + P F+ + I++K LRFC ERL SL+
Sbjct: 300 RAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKHLRDLTFIERKPLRFCAERLTSLVR 359
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+T+ +++ +Q + FATLV TY GF +IIEPF+ +P+PVL L+C DA++A+
Sbjct: 360 TLELTNIEDYQPLQEVATFATLVATYETGFLLIIEPFESATATVPNPVLHLTCLDAAIAI 419
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVF+RF SV++TSGT+SP+D+YPR+LNF+ VV SF M+LTR PM++ RG+DQ V
Sbjct: 420 KPVFERFYSVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKSFLPMIVDRGNDQNQV 479
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+++F+ R+D V RN+G LL+E + PDG+V FF SY YM+ II+ W IL + ++
Sbjct: 480 TSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGMEILDTVWKY 539
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D ET LAL+ +R AC+ GRGAV VARGKV+EGIDFD HYGR VI GVP
Sbjct: 540 KLILVETPDAQETALALETFRTACNNGRGAVLLCVARGKVSEGIDFDHHYGRTVICMGVP 599
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+QYT S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+GRVIR K DYG+M+ ADKR+
Sbjct: 600 YQYTESRILKARLEFLRETYRIKEADFLSFDAMRHAAQCLGRVIRGKDDYGIMVLADKRF 659
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
++ K+++LP WI L LS D A+ A+ FL+ M+ P+ +A G + S D
Sbjct: 660 NK--KQTQLPKWIQQGLDAKSTKLSIDQAVGAAKNFLKDMSIPWSRAEQEGHSS-WSLED 716
Query: 743 LE 744
LE
Sbjct: 717 LE 718
>gi|345562800|gb|EGX45813.1| hypothetical protein AOL_s00117g18 [Arthrobotrys oligospora ATCC
24927]
Length = 749
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/723 (50%), Positives = 500/723 (69%), Gaps = 18/723 (2%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT++LLSLI +Y PE+ KLIYC+RT+ E+EK L ELK L Y+ + LG
Sbjct: 1 MPSGTGKTVSLLSLIVAYQQHYPEHR-KLIYCSRTMSEIEKALYELKALMEYRAKELGQV 59
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
+GL+SRKNLC++ V + VDA CR TA +V+ + +E+C + +N
Sbjct: 60 EDFRGLGLTSRKNLCLHPSVKREKKGTVVDARCRSLTAGFVKEKKEKGEEVESCIYHDNL 119
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+ ++PPGVYTL + +G+ Q CPYF AR M+ + NV++YSY YLLDPK+A +
Sbjct: 120 DLLEPHNLIPPGVYTLDGMLKYGEDQKQCPYFTARRMMPYCNVIIYSYHYLLDPKIAERV 179
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
SKE+ K+ +VVFDEAHNIDNVCIE+LS+ + +L A R + + ++IE K+TDA +L
Sbjct: 180 SKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKAARGCTSLEKKIEDMKSTDADKL 239
Query: 282 RAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR 339
+ EY +LVEGL A +++++NP LP D+LKEAVPGNIRRAEHF+ L+R V+YL+
Sbjct: 240 QQEYAKLVEGLQDASTAREEDSFMANPVLPDDLLKEAVPGNIRRAEHFVAFLKRFVEYLK 299
Query: 340 GRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC 399
R++ +V E P SF+ + I++K LRFC ERL SL+ TLE+++ +EF +Q +
Sbjct: 300 TRMKVLHVISETPPSFLQHLKDLTFIEKKPLRFCAERLTSLIRTLELSNVEEFQALQEVA 359
Query: 400 DFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTL 459
FATLV TY +GF +I+EPF+ +P+P+ +C DAS+A+KPVFDRF SVVITSGT+
Sbjct: 360 TFATLVATYEKGFLLILEPFESETATVPNPIFHFTCLDASIAIKPVFDRFWSVVITSGTI 419
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
SP+++YP++L F VV S+ M+L R PMV+TRGSDQ+ +S++F++R+DP V RNYG
Sbjct: 420 SPLEMYPKMLQFDCVVQESYAMTLARRSFLPMVVTRGSDQVAISSRFEIRNDPSVVRNYG 479
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
L++E I PDG+V FF SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL
Sbjct: 480 NLMIEFSKITPDGLVIFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDSQETSLAL 539
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
+ YR AC GRGAV VARGKV+EGIDFD YGR VI GVPFQYT S+IL ARLE+LR
Sbjct: 540 ETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVICIGVPFQYTESRILKARLEFLR 599
Query: 640 DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+ F+IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ ADKR+ + KR++LP WI L
Sbjct: 600 ENFRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADKRFGK--KRNQLPKWIAQAL 657
Query: 700 RDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG-------------RKTLLSQADLEKM 746
D+ +NLS DM++ A++FLR MAQP+ + G RK + Q ++E+M
Sbjct: 658 LDSEMNLSVDMSVAAAKKFLRTMAQPFAQKDQEGISTWSLEDLNAHMRKVRIQQEEMERM 717
Query: 747 TND 749
D
Sbjct: 718 QVD 720
>gi|154296465|ref|XP_001548663.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 764
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/719 (50%), Positives = 500/719 (69%), Gaps = 13/719 (1%)
Query: 30 RALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKL 89
R LDA GHC+LEMP+GTGKTI+LLSLI +Y PE+ KLIYC+RT+ E+EK LAELK
Sbjct: 2 RTLDAGGHCVLEMPSGTGKTISLLSLIVAYQQYYPEHR-KLIYCSRTMSEIEKALAELKA 60
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
L Y+ LG +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 61 LMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKERG 120
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
++ + E + ++P GV+TL + +G++ CPYF +R M+ F NV++YSY
Sbjct: 121 EDVPNLDLLEPHN------LIPNGVWTLDGIMRYGEEHKQCPYFTSRRMMSFCNVIIYSY 174
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YLLDPK+A +SKE+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR +
Sbjct: 175 HYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITDDSLRRATRGAMNLESR 234
Query: 270 IERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
I + +D+ +L+ EY +LVEGL A +A++SNPALP D+LKEAVPGNIRRAEHF
Sbjct: 235 ISDLRDSDSEKLKDEYAKLVEGLRGADEARAEDAFMSNPALPDDLLKEAVPGNIRRAEHF 294
Query: 328 LHVLRRLVQYLRG-RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEI 386
+ L+R ++YL+ R++ V E P SF+A + + I++K LRFC ERL SL+ TLE+
Sbjct: 295 VVFLKRFIEYLKKTRMKVRQVISETPASFLAHLKEYTYIEKKPLRFCAERLTSLVRTLEL 354
Query: 387 TDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
T+ +++ +Q + FATLV TY +GF +I+EP++ +P+PVL +C DA++A+KPVF
Sbjct: 355 TNIEDYQPLQEVATFATLVATYEKGFLLILEPYESDTAEVPNPVLHFTCLDAAIAIKPVF 414
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+RF SV+ITSGT+SP+++YP++LNF VV S+ M+L R PM++TRGSDQ+ +S+ F
Sbjct: 415 ERFSSVIITSGTISPLEMYPKMLNFECVVQESYPMTLARRSFLPMIVTRGSDQVAISSGF 474
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
+R++P V RNYG LL EM + PDG+V FF SY YM+ II+ W GIL E+ ++KL+
Sbjct: 475 QVRNEPAVVRNYGNLLTEMSKLTPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLIL 534
Query: 567 IETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
+ET D ET+LAL+ YR AC GRGA+ VARGKV+EGIDFD YGR V+ GVPFQYT
Sbjct: 535 VETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYT 594
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
S+IL ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ +
Sbjct: 595 ESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFLK-- 652
Query: 687 KRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
KR++LP WI + D+ +NLSTDMA+ A++FLR MAQP+ G T S DLEK
Sbjct: 653 KRTQLPKWINQAILDSEVNLSTDMAVGSAKKFLRNMAQPFKAKDQEGIST-WSLQDLEK 710
>gi|326480373|gb|EGE04383.1| DNA repair helicase RAD3 [Trichophyton equinum CBS 127.97]
Length = 770
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/738 (47%), Positives = 506/738 (68%), Gaps = 24/738 (3%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ + FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKTI LL+LI +Y
Sbjct: 1 MEFFIDDLPILFPYPRIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK L+EL+ L Y+++ LG A+GL+SRKNLC++
Sbjct: 61 QHYPEHR-KLIYCSRTMSEIEKALSELRALMKYRSQKLGVVEDFRALGLTSRKNLCLHPS 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +++ + ++E C + EN + + ++PPGV+TL L
Sbjct: 120 VKREKSGAVVDARCRSLTAGFIKEKKEKGEDVELCIYHENLDLLEPSNLVPPGVFTLDGL 179
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G+Q CPYF AR M+ + NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 180 LKYGEQHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 239
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
NVCIE+LS+ + +L A+R + + ++I+ K++DA +L++EY +LVEGL
Sbjct: 240 NVCIESLSIDLTEDSLRKASRGANNLERKIDDMKSSDADKLQSEYQKLVEGLREADEARE 299
Query: 301 A--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
++NP LP D+LKE+VPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF++
Sbjct: 300 EEQLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSH 359
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY GF +I+EP
Sbjct: 360 LKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLAATYEIGFLLILEP 419
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F + S
Sbjct: 420 FESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFDAALQES 479
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG +L+E I PDG+V FF
Sbjct: 480 YSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFP 539
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL + +KL+ +ET D E++LAL+ Y
Sbjct: 540 SYLYMESIISMWQGMGILDSVWNYKLILVETPDSQESSLALETY---------------- 583
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
++EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDALR A
Sbjct: 584 ---LSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDALRHA 640
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ F
Sbjct: 641 AQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWISQAMLESETNLSTDMAVATAKSF 698
Query: 719 LRKMAQPYDKAGSIGRKT 736
L+ MAQP+ G T
Sbjct: 699 LKSMAQPFKAKDQEGIST 716
>gi|44889982|emb|CAF32100.1| DNA repair helicase, putative [Aspergillus fumigatus]
Length = 767
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/741 (49%), Positives = 506/741 (68%), Gaps = 33/741 (4%)
Query: 7 DVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPEN 66
D+ V FPY IYPEQY+YM +LK+ LDA GHC+LEMP+GTGKT++LLSLI +Y PE+
Sbjct: 7 DLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEH 66
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
KLIYC+RT+ E+EK LAELK L ++++ LG A+GL+SRKNLC++ V ++
Sbjct: 67 R-KLIYCSRTMSEIEKALAELKELMKFRSQQLGYTEDFRALGLTSRKNLCLHPSVKREKS 125
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQ 186
VDA CR TA +V+ ++E C + E A VL R Q
Sbjct: 126 GTVVDARCRSLTAGFVKEKKERGEDVELCIYHE-----VCADVL----------RKLWVQ 170
Query: 187 QGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEA 246
+C NV++YSY YLLDPK+A +S+E+ K+ +VVFDEAHNIDNVCIEA
Sbjct: 171 MPYC------------NVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIEA 218
Query: 247 LSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLS 304
LS+ + +L ATR + + ++I K++DA +L+ EY++LVEGL A + + +++
Sbjct: 219 LSIDITEDSLRKATRGANNLERKISEMKSSDAEKLQNEYSKLVEGLREAEQARDEDQFIA 278
Query: 305 NPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAG 364
NP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+ +
Sbjct: 279 NPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLTHVKDLTF 338
Query: 365 IDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP 424
I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EPF+
Sbjct: 339 IERKPLRFCAERLTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESETA 398
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
+P+PVL +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F V+ S+ M+L
Sbjct: 399 TVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFPTVLQESYTMTLA 458
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
R PM++TRGSDQ +S+ F +R+DPGV RNYG +++E I PDGIV FF SY YM+
Sbjct: 459 RRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYME 518
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
II+ W GIL I +KL+ +ET D E++LAL+ YR AC GRGA+ F VARGKV+E
Sbjct: 519 SIISMWQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGRGAILFCVARGKVSE 578
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDFD HYGR V+ GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GR
Sbjct: 579 GIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGR 638
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
V+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ FLR MAQ
Sbjct: 639 VLRGKDDYGIMVLADRRFQK--KRNQLPKWISQAMLESETNLSTDMAVATAKNFLRTMAQ 696
Query: 725 PYDKAGSIGRKTLLSQADLEK 745
P+ G T S AD+E+
Sbjct: 697 PFKAKDQEGIST-WSLADIER 716
>gi|440472803|gb|ELQ41640.1| DNA repair helicase RAD3 [Magnaporthe oryzae Y34]
gi|440484308|gb|ELQ64395.1| DNA repair helicase RAD3 [Magnaporthe oryzae P131]
Length = 805
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/748 (48%), Positives = 503/748 (67%), Gaps = 35/748 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M+F ++D+ V FPY IYPE LD G+C+LEMP+GTGKT LLSLI +Y
Sbjct: 1 MLFYIDDLPVIFPYPRIYPE----------TLDVGGNCVLEMPSGTGKTATLLSLIVAYQ 50
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
PE+ KLIYC+RT+ E+EK LAELK L Y+ LG +GL+SRKNLC++
Sbjct: 51 QHYPEHR-KLIYCSRTMSEIEKALAELKNLMKYRAGELGKEEDFRGLGLTSRKNLCLHPS 109
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V ++ VDA CR TA +V+ + ++E C + +N + ++P GV+TL+ L
Sbjct: 110 VKREKSGAIVDARCRGLTAGFVKEKKEKGEDVELCVYHDNLDLLEPHNLIPNGVWTLEGL 169
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF +R M+Q+ NV++YSY YLLDPK+A +SKE+ ++S++VFDEAHNID
Sbjct: 170 LRYGEEHKQCPYFTSRRMMQYCNVIIYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNID 229
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS + +L A+R + + I + TD +L EY +LVEGL A
Sbjct: 230 NVCIESLSTDITEDSLRKASRGAMNLEKRINEMRETDQNQLEDEYRKLVEGLREADEARQ 289
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRG------------------ 340
+A++SNP LP D+LKEAVPGNIRRAEHF+ L+R ++YL+
Sbjct: 290 EDAFMSNPVLPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKASNSLSSQIYVYFQLTLLI 349
Query: 341 --RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTI 398
R++ V E P SF+A + + I++K LRFC ERL SL+ TLE+T+ ++F +Q +
Sbjct: 350 QTRMKVLEVISETPPSFLAHLKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDFQPLQEV 409
Query: 399 CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGT 458
FATLV TY +GF +++EP++ IP+PVL +C DA++A+KPVF+RF++V+ITSGT
Sbjct: 410 ATFATLVATYDKGFLLLLEPYESEKSQIPNPVLHFTCLDAAIAIKPVFERFKTVIITSGT 469
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNY 518
LSP+++YP++L F VV S+ M+L R PM++T+GSDQ +S+ F +R+DP V RNY
Sbjct: 470 LSPLEMYPKMLGFDAVVQESYAMTLARRSFLPMIVTKGSDQASISSSFAVRNDPAVVRNY 529
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G+LL E I PDG+V FF SY YM+ II+ W IL EI ++KL+ +ET D ET +A
Sbjct: 530 GQLLTEFAKITPDGMVVFFPSYFYMESIISMWQGMKILDEIWKYKLILVETPDAQETAVA 589
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L+ YR AC G GA+ VARGKV+EGIDFD YGR V+ GVPFQYT S IL ARLE+L
Sbjct: 590 LETYRTACCNGTGAIMLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESLILKARLEFL 649
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
R+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + KR +LP WI
Sbjct: 650 RETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFPK--KRPQLPKWINQA 707
Query: 699 LRDAHLNLSTDMALHIAREFLRKMAQPY 726
L ++ +N+STDMA+ AR+FL+ MAQP+
Sbjct: 708 LAESDVNMSTDMAVSAARKFLKSMAQPF 735
>gi|406859189|gb|EKD12258.1| tfiih complex helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 786
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/722 (49%), Positives = 501/722 (69%), Gaps = 9/722 (1%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LKR LDA GHC+LEMP+GTGKT++LLSLI +Y PE+ KLIYC+RT+ E+EK L
Sbjct: 1 MCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYYPEHR-KLIYCSRTMSEIEKAL 59
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L Y+ LG + +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 60 FELEALMKYRAEMLGHEEEFRGLGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKE 119
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
++ C + +N + ++P GV+T + + +G++ CPYF +R M+ F NV
Sbjct: 120 KKERGEDVPVCIYHDNLDLLEPHDLIPNGVWTFEGILKYGEEHKQCPYFTSRRMMSFCNV 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR
Sbjct: 180 IIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQ 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ +I K +DA +L++EY +LVEGL A +A++SNPALP D+LKEAVPGNIR
Sbjct: 240 NLEIKITDMKNSDADKLKSEYAKLVEGLRDADDARQEDAFMSNPALPDDLLKEAVPGNIR 299
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
RAEHF+ L+Q R++ V E P SF+A + + I++K LRFC ERL SL+
Sbjct: 300 RAEHFITSESDLLQ---TRMKVRQVISETPPSFLAHLKEYTFIEKKPLRFCAERLTSLVR 356
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
TLE+T+ +++ +Q + FATLV TY +GF +I+EP++ +P+PVL +C DA++A+
Sbjct: 357 TLELTNIEDYQPLQEVATFATLVATYEKGFVLILEPYESDTAEVPNPVLHFACLDAAIAI 416
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
KPVFDRF SV+ITSGT+SP+++YP++L F VV S+ M+L R PM++TRGSDQ+ +
Sbjct: 417 KPVFDRFSSVIITSGTISPLEMYPKMLGFTAVVQESYTMTLARRSFLPMIVTRGSDQVAI 476
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
S+ F +R++P V RNYG LL E + PDG+V FF SY YM+ II+ W GIL E+ ++
Sbjct: 477 SSGFQVRNEPSVVRNYGHLLTEFSKLTPDGMVVFFPSYLYMESIISMWQGMGILDEVWKN 536
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+ +ET D ET+LALD YR AC+ GRGA+ VARGKV+EGIDFD YGR V+ GVP
Sbjct: 537 KLILVETPDAQETSLALDTYRTACNNGRGAILLCVARGKVSEGIDFDNQYGRTVLCIGVP 596
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S+IL ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+
Sbjct: 597 FQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRF 656
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQAD 742
+ KR++LP WI + +A +NLSTD A+ A++FLR MAQP+ + G T S D
Sbjct: 657 LK--KRNQLPKWIDDAMHEAEVNLSTDTAVGTAKKFLRGMAQPFQASDQEGIST-WSLED 713
Query: 743 LE 744
LE
Sbjct: 714 LE 715
>gi|403220542|dbj|BAM38675.1| DNA excision-repair helicase [Theileria orientalis strain Shintoku]
Length = 851
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/836 (44%), Positives = 524/836 (62%), Gaps = 106/836 (12%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F +E + VYFPY IYPEQ +YM LK ALDAKGH +LEMPTGTGKT+AL S ++SY L+
Sbjct: 4 FNIEGIEVYFPYPKIYPEQIAYMRSLKNALDAKGHAVLEMPTGTGKTVALFSFVSSYQLA 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL--------------GPAAKILAIG 108
KPE KL+YCTRT+HEMEK+L EL+ + Y+ + LA+G
Sbjct: 64 KPELG-KLVYCTRTIHEMEKSLLELREVIAYRNEQMVKKEESEKESSENKKKNGYFLAVG 122
Query: 109 LSSRKNLCVNSRVLAAENRDSVDAACRKR--------TASWVR----------------- 143
L SR+NLC++ V + +R +D T+ W R
Sbjct: 123 LCSRRNLCIHPEVSSIADRTKIDEKSTDEQKIIGCDLTSMWKRIQFEDIIDNKRSEYTVQ 182
Query: 144 -------------ALAAENPNIET------CEFFENYEKAASAAVLPPGVYTLQDLRAF- 183
+ + P+IE C ++E E+ + ++P GVYTL+ L+ +
Sbjct: 183 YEGASPVKMPPSISTVEKIPDIEEFNALGLCGYYETMERVWNPTMIPSGVYTLEGLKEYS 242
Query: 184 --------GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES------ 229
GK CPYF+AR ++ AN+VV +YQY++DPKV+ + + ES
Sbjct: 243 KNFKNANTGKPSPICPYFMARRSIEHANIVVLNYQYMIDPKVSDAVFSHLCTESYLNMTK 302
Query: 230 --------------------------VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
VVVFDEAHNIDNVCIEALSV + +TL+ A +L
Sbjct: 303 ENPFSKEELIVPLTTNLGKDKTKLPIVVVFDEAHNIDNVCIEALSVELSTETLDNAYSDL 362
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRR 323
+R+ + + + D L EY +LVE ++ NP L +DIL +AVPG+IR+
Sbjct: 363 TRLEENVNELRQRDQQLLLEEYQKLVENTNFDSIDIEGYM-NPVLRADILAKAVPGSIRK 421
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF+ L+ ++ YL+ ++ + + EGP+ F+ I + ++ Y R+ SL+ T
Sbjct: 422 AEHFISFLKVVIGYLKKYIKVQEAKSEGPLMFLYRFEHETEISSEVMQHTYNRMKSLLNT 481
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
L++T + +Q + DF TLVGTY+ GF +I+EP+ DP+LQ SC DAS+A+K
Sbjct: 482 LKLTSIGDITSLQLVVDFCTLVGTYSNGFIVIVEPYPTSTY---DPLLQFSCLDASIAMK 538
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PV D FQSVV+TSGT+SP++ YP++LNF PV+++S MS RDC+CP+++++G++Q+ +S
Sbjct: 539 PVLDNFQSVVLTSGTISPLEFYPKILNFTPVLTQSLPMSFDRDCLCPIIVSKGANQVHIS 598
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
TKFD+R+D V RNYG LL++ +PDGIVCFF SY+YM+ I++ W +SGIL IM+HK
Sbjct: 599 TKFDLRTDITVLRNYGALLIDFCKHIPDGIVCFFPSYAYMELILSHWYESGILASIMEHK 658
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+F+ET+D V TTLAL NYRKACD GRGA+F S+ RGKVAEGIDFDRHYGR V++ G+PF
Sbjct: 659 LIFMETKDPVTTTLALYNYRKACDVGRGALFLSICRGKVAEGIDFDRHYGRCVVLVGIPF 718
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
QYTLSK+L ARL+++R + I+E +F+TFDA+RQAAQCVGR+IR+KAD+G+M+FAD RYS
Sbjct: 719 QYTLSKVLKARLDFMRCNYGIQENEFITFDAMRQAAQCVGRIIRNKADFGLMVFADSRYS 778
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY--DKAGSIGRKTL 737
R DK+SKLP WIL + +HL L+T+ A+ +A+ F R MAQ Y +K +G+K L
Sbjct: 779 RADKKSKLPPWILKSIDPSHLFLTTESAVAVAKTFFRNMAQEYTPNKFTRLGQKML 834
>gi|302418904|ref|XP_003007283.1| DNA repair helicase RAD3 [Verticillium albo-atrum VaMs.102]
gi|261354885|gb|EEY17313.1| DNA repair helicase RAD3 [Verticillium albo-atrum VaMs.102]
Length = 756
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/704 (50%), Positives = 485/704 (68%), Gaps = 12/704 (1%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT++LLSLI +Y PE+ KLIYC+RT+ E+EK LAEL+ L Y+T LG
Sbjct: 1 MPSGTGKTVSLLSLIVAYQQHYPEHR-KLIYCSRTMSEIEKALAELRELMKYRTEQLGQE 59
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
+ +GL+SRKNLC++ V ++ VDA CR TA +V+ + N++ C + +N
Sbjct: 60 EEFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKDKGENVDVCVYHDNL 119
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+ ++P GV+T L +G+Q CPYF +R M+Q+ NV++YSY YLLDPK+A +
Sbjct: 120 DLLEPHNLIPNGVWTFDGLLRYGEQHKQCPYFTSRRMMQYCNVIIYSYHYLLDPKIAERV 179
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
S+E+ K+ +VVFDEAHNIDNVCIE+LS + +L A R ++++I K TD +L
Sbjct: 180 SRELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKAARGAQNLDRKIAEMKQTDQEQL 239
Query: 282 RAEYNRLVEGL--ALRGNLPNAWLSNPA-------LPSDILKEAVPGNIRRAEHFLHVLR 332
+ EY +LVEGL A +A++SNPA LP D+L EAVPGNIRRAEHF+ L+
Sbjct: 240 QNEYLKLVEGLRDAGEARQEDAFMSNPARLTDGKALPDDLLNEAVPGNIRRAEHFVAFLK 299
Query: 333 RLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEF 392
R ++YL+ R++ N E P SF+A + I++K L+FC ERL SL+ TLE+T+ +++
Sbjct: 300 RFIEYLKTRMKVRNTISETPPSFLAHLKEFTFIEKKPLKFCAERLTSLVRTLELTNIEDY 359
Query: 393 LHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSV 452
+Q + FATLV TY +GF +I+EPF+ +P+PVL +C DA++A+KPVFDRF SV
Sbjct: 360 QPLQEVATFATLVATYEKGFLLILEPFESEAAEVPNPVLHFTCLDAAIAIKPVFDRFSSV 419
Query: 453 VITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDP 512
+ITSGT+SP+++YP++L F VV S+ M+L R PM++TRGSDQ VST F +R++P
Sbjct: 420 IITSGTISPLEMYPKMLGFSTVVQESYSMTLARRSFLPMIVTRGSDQASVSTSFQVRNEP 479
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
V RNYG LL E I PDG+V FF SY YM+ II+ W GIL E+ ++KL+ +ET D
Sbjct: 480 SVVRNYGSLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDA 539
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
ET+LAL+ YR AC GRGAV VARGKV+EGIDFD YGR V+ GVPFQYT S+IL
Sbjct: 540 QETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRAVLNIGVPFQYTESRILK 599
Query: 633 ARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + KR +LP
Sbjct: 600 ARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQK--KRVQLP 657
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
WI L DA NLSTDMA+ AR FL++MAQP+ G T
Sbjct: 658 KWINQGLLDADTNLSTDMAVSSARRFLKQMAQPFRAKDQEGVST 701
>gi|432891078|ref|XP_004075537.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oryzias latipes]
Length = 665
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/637 (55%), Positives = 459/637 (72%), Gaps = 9/637 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +E + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P + KLIYC+RTV E+EK + EL+ L + + G LA+ LSSRKNLC++
Sbjct: 61 KAFPLDVTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGEVNNFLALALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C TAS++RA NP+ C F+E ++ LP G+Y L DL
Sbjct: 121 VSSLRFGKEVDGKCHSLTASYIRAQRHSNPDQPVCRFYEEFDAVGRQVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++GWCPY+LAR+ + AN+VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIER----FKATDAGRLRAEYNRLVEGL--AL 294
NVCI+++SV++ R+TL+ R I E++R K TDA +LR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNITRRTLD---RRFCLIQTELKRKILKIKDTDAAKLREEYRRLVEGLKEAN 297
Query: 295 RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
+ +L+NP LP +IL+EAVPG+IR AEHFL LRR ++YL+ RL +V +E
Sbjct: 298 VARETDVYLANPVLPDEILQEAVPGSIRTAEHFLGFLRRFLEYLKSRLRVHHVVQESAPQ 357
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
F+ I ID+K LRFC ERL SL+ TLEI D +F + I +FATLV TY+ GF+I
Sbjct: 358 FLKDIFEKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSLGFTI 417
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPV 474
IIEPFD+R P I +PVL SC D S+A+KPVF RFQSVVITSGTLSP+D+YP++L+F PV
Sbjct: 418 IIEPFDDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPKILDFRPV 477
Query: 475 VSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIV 534
SF M+L R C+CP+++ RG+DQ+ +S+KF+ R D V RNYG LL+EM +IVPDGIV
Sbjct: 478 TMASFTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIV 537
Query: 535 CFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVF 594
FF SY YM+ I+A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+
Sbjct: 538 AFFTSYVYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAIL 597
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
SVARGKV+EGIDF H+GR VIMFGVP+ YT S+IL
Sbjct: 598 LSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRIL 634
>gi|312283017|dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila]
Length = 376
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/377 (91%), Positives = 364/377 (96%), Gaps = 1/377 (0%)
Query: 381 MLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASL 440
MLTLEITDTD+FL IQT+CDFATLVGTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASL
Sbjct: 1 MLTLEITDTDDFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASL 60
Query: 441 AVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
A+KPVFDRFQSVVITSGTLSPIDLYPRLL+F+PVVSRSFKMS+TRDCICPMVLTRGSDQL
Sbjct: 61 AIKPVFDRFQSVVITSGTLSPIDLYPRLLSFNPVVSRSFKMSMTRDCICPMVLTRGSDQL 120
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
PVSTKFDMRSDPGV RNYGK LVEMVSIVPDG+VCFFVSYSYMD IIATWN++GILKEIM
Sbjct: 121 PVSTKFDMRSDPGVVRNYGKFLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILKEIM 180
Query: 561 QHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
Q KLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV+MFG
Sbjct: 181 QQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVMFG 240
Query: 621 VPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADK 680
VPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADK
Sbjct: 241 VPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADK 300
Query: 681 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQ 740
RYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG++GRKTLL+Q
Sbjct: 301 RYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQ 360
Query: 741 ADLEKMTNDGSINEMLY 757
DLEKM G + +M Y
Sbjct: 361 EDLEKMAETG-VQDMAY 376
>gi|346976950|gb|EGY20402.1| DNA repair helicase RAD3 [Verticillium dahliae VdLs.17]
Length = 772
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/756 (47%), Positives = 493/756 (65%), Gaps = 59/756 (7%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELK------------------RALDAKGHCLLEM 42
M F ++D+ V FPY IYPEQY+YM +LK LDA GHC+LEM
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDLKSRSSMAETSPCQYADTALETLDAGGHCVLEM 60
Query: 43 PTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA 102
P+GTGKT++LLSLI +Y PE+ KLIYC+RT+ E+EK LAEL+ L Y+T LG
Sbjct: 61 PSGTGKTVSLLSLIVAYQQHYPEHR-KLIYCSRTMSEIEKALAELRELMKYRTEQLGQEE 119
Query: 103 KILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE 162
+ TA +V+ + N++ C + +N +
Sbjct: 120 DL---------------------------------TAGFVKEKKDKGENVDVCVYHDNLD 146
Query: 163 KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIIS 222
++P GV+T L +G+Q CPYF +R M+Q+ NV++YSY YLLDPK+A +S
Sbjct: 147 LLEPHNLIPNGVWTFDGLLRYGEQHKQCPYFTSRRMMQYCNVIIYSYHYLLDPKIAERVS 206
Query: 223 KEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
+E+ K+ +VVFDEAHNIDNVCIE+LS + +L A R ++++I K TD +L+
Sbjct: 207 RELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKAARGAQNLDRKIAEMKQTDQEQLQ 266
Query: 283 AEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRG 340
EY +LVEGL A +A+++NP D+L EAVPGNIRRAEHF+ L+R ++YL+
Sbjct: 267 NEYLKLVEGLRDAGEARQEDAFMANP---DDLLNEAVPGNIRRAEHFVAFLKRFIEYLKT 323
Query: 341 RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
R++ N E P SF+A + I++K L+FC ERL SL+ TLE+T+ +++ +Q +
Sbjct: 324 RMKVRNTISETPPSFLAHLKEFTFIEKKPLKFCAERLTSLVRTLELTNIEDYQPLQEVAT 383
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
FATLV TY +GF +I+EPF+ +P+PVL +C DA++A+KPVFDRF SV+ITSGT+S
Sbjct: 384 FATLVATYEKGFLLILEPFESEAAEVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTIS 443
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGK 520
P+++YP++L F VV S+ M+L R PM++TRGSDQ VST F +R++P V RNYG
Sbjct: 444 PLEMYPKMLGFSTVVQESYSMTLARRSFLPMIVTRGSDQASVSTSFQVRNEPSVVRNYGS 503
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALD 580
LL E I PDG+V FF SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+
Sbjct: 504 LLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALE 563
Query: 581 NYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD 640
YR AC GRGAV VARGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR+
Sbjct: 564 TYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRAVLNIGVPFQYTESRILKARLEFLRE 623
Query: 641 TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + KR +LP WI L
Sbjct: 624 TYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQK--KRVQLPKWINQGLL 681
Query: 701 DAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
DA NLSTDMA+ AR FL++MAQP+ G T
Sbjct: 682 DADTNLSTDMAVSSARRFLKQMAQPFRAKDQEGVST 717
>gi|302503364|ref|XP_003013642.1| hypothetical protein ARB_00089 [Arthroderma benhamiae CBS 112371]
gi|291177207|gb|EFE33002.1| hypothetical protein ARB_00089 [Arthroderma benhamiae CBS 112371]
Length = 749
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/697 (48%), Positives = 487/697 (69%), Gaps = 5/697 (0%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKTI LL+LI +Y PE+ KLIYC+RT+ E+EK L+EL+ L Y+++ LG
Sbjct: 1 MPSGTGKTITLLALIVAYQQHYPEHR-KLIYCSRTMSEIEKALSELRALMKYRSQKLGVV 59
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
A+GL+SRKNLC++ V ++ VDA CR TA +++ + ++E C + EN
Sbjct: 60 EDFRALGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFIKEKKEKGEDVELCIYHENL 119
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+ + ++PPGV+TL L +G+Q CPYF AR M+ + NV++YSY YLLDPK+A +
Sbjct: 120 DLLEPSNLVPPGVFTLDGLLKYGEQHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERV 179
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
SKE+ ++S++VFDEAHNIDNVCIE+LS+ + +L A+R + + ++I+ K++DA +L
Sbjct: 180 SKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRKASRGANNLERKIDDMKSSDADKL 239
Query: 282 RAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR 339
+ EY +LVEGL ++NP LP D+LKE+VPGNIRRAEHF+ L+R ++YL+
Sbjct: 240 QNEYQKLVEGLREADEAREEEQLMANPVLPDDLLKESVPGNIRRAEHFVAFLKRFIEYLK 299
Query: 340 GRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC 399
R++ + E P+SF++ + I++K LRFC ERL SL+ TLE+ + +++ +Q +
Sbjct: 300 TRMKVTHTISETPLSFLSHLKDLTFIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVA 359
Query: 400 DFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTL 459
FATL TY +GF +I+EPF+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTL
Sbjct: 360 TFATLAATYEKGFLLILEPFESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTL 419
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
SP+++YP++L F + S+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG
Sbjct: 420 SPLEMYPKMLGFDAALQESYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYG 479
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
+L+E I PDG+V FF SY YM+ II+ W GIL + +KL+ +ET D E++LAL
Sbjct: 480 NMLLEFCRITPDGVVVFFPSYLYMESIISMWQGMGILDSVWNYKLILVETPDSQESSLAL 539
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
+ YR AC GRGAV VARGKV+EGIDFD HYGR V+ GVPFQYT S+IL ARLE+LR
Sbjct: 540 ETYRTACCNGRGAVLLCVARGKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLR 599
Query: 640 DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+ ++I+E DFL+FDALR AAQC+GRV+R K DYG+M+ AD+R+ + KR++LP WI +
Sbjct: 600 ENYRIRENDFLSFDALRHAAQCLGRVLRGKDDYGVMVLADRRFQK--KRNQLPKWISQAM 657
Query: 700 RDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
++ NLSTDMA+ A+ FL+ MAQP+ G T
Sbjct: 658 LESETNLSTDMAVATAKSFLKSMAQPFKAKDQEGIST 694
>gi|403168572|ref|XP_003889745.1| DNA excision repair protein ERCC-2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375167558|gb|EHS63460.1| DNA excision repair protein ERCC-2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 784
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/709 (50%), Positives = 487/709 (68%), Gaps = 20/709 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIF ++D+ + FPYD IYPEQY+YM +LKR LD GHC+LEMP+GTGKTI+LLSLI +Y
Sbjct: 63 MIFTIDDLEILFPYDKIYPEQYAYMCDLKRTLDLGGHCVLEMPSGTGKTISLLSLIVAYQ 122
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ----------TRHLGPAAK--ILAIG 108
L PE KL+YC+RTV E+EK L ELK L Y+ T + P + L +G
Sbjct: 123 LYYPER-RKLVYCSRTVPEIEKALIELKRLMAYRAAQHRLRAGLTDNSAPTNEDDFLGVG 181
Query: 109 LSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NIETCEFFENYEKAASA 167
L+SRKNLC++ +V + VDA CR T++W +P ++ C+F E +
Sbjct: 182 LTSRKNLCIHPQVSREKKGKVVDARCRDLTSAWACEKGRADPGSVPLCDFHEKLGELEPG 241
Query: 168 AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK 227
++P GV+TL+++ A+G Q G CPYF R M+ A++++YS+ YLLDPKVA +SKE+
Sbjct: 242 NLIPRGVWTLEEITAYGHQHGICPYFAVRRMLAHADIIIYSFHYLLDPKVATQVSKELLP 301
Query: 228 ESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNR 287
S+VVFDEAHNIDNVCIE+LS+ + + L+ A +++ ++++I K TDA +L+ EY R
Sbjct: 302 NSIVVFDEAHNIDNVCIESLSIDLTKGMLDNAGKSIGALDEKIREIKRTDASKLQNEYER 361
Query: 288 LVEGLALRGNL-----PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL 342
LV GL N A L NP LP D+L+EAVPGNIRRAEHF L R V+YL+ R+
Sbjct: 362 LVRGLGQSENTFESEEEAAILGNPVLPEDLLQEAVPGNIRRAEHFTAFLTRFVEYLKTRM 421
Query: 343 ETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFA 402
+V E P SF+ + ID+K LRFC +RL SL+ TLE+TD D++ +Q + FA
Sbjct: 422 RVLHVVAETPPSFLQHVKDLTYIDRKPLRFCADRLTSLIRTLELTDLDQYNALQKVASFA 481
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSC-HDASLAVKPVFDRFQSVVITSGTLSP 461
TLV TY +GF +I+EPF+ +P+PV L P F+ F SV+I G +SP
Sbjct: 482 TLVATYEKGFLLILEPFETENATVPNPVFHSDVVFYVLLGTNPFFEGFSSVIIPWGPISP 541
Query: 462 IDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKL 521
++YP++L F V S+ M+L R+ P+ +TRGSDQ + F+ ++DP V RN+G +
Sbjct: 542 REMYPKMLGFGATVRDSYSMTLPRNFFLPLGITRGSDQGGIFWGFEFQNDPSVVRNFGTI 601
Query: 522 LVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN 581
L+E IVPDGIV FF SY YM+ I+A W+D GILKE+ ++KL+F+ET D VET++AL+N
Sbjct: 602 LIEYCKIVPDGIVAFFPSYLYMESIVAAWHDMGILKEVWKYKLIFVETPDAVETSIALEN 661
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT 641
YR+ACD G+GAV SVARGKV+EGIDFD +YGR VIMFG+P+QYT S+IL ARLE+LRD
Sbjct: 662 YRRACDNGKGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDN 721
Query: 642 FQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK 690
++I+E D+LTFDA+R AAQCVGRV+R K DYG+M+FADKR++R DKR++
Sbjct: 722 YRIRENDYLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFARADKRAQ 770
>gi|429328706|gb|AFZ80466.1| DNA repair helicase rad3/xp-D, putative [Babesia equi]
Length = 851
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/820 (45%), Positives = 517/820 (63%), Gaps = 100/820 (12%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F ++ + V+FPY IYPEQ +YM LK ALDA GH +LEMPTGTGKT+AL S + SY L+
Sbjct: 4 FWVDGIEVFFPYPKIYPEQLAYMRSLKNALDAHGHAVLEMPTGTGKTVALFSFVASYQLA 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL----------------GPAAK--- 103
+PE KLIYCTRT+HEMEK+L ELK + NY+ L GP A
Sbjct: 64 RPEVG-KLIYCTRTIHEMEKSLLELKEVINYRNAELRKDRLAKNDIAVKTEPGPEASSAV 122
Query: 104 --------------------ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
LA GL SR+NLC++ V A +R +D C + W R
Sbjct: 123 DKYNRTGTWPIIHLNTHLGYFLAFGLCSRRNLCIHPEVSACADRTKIDERCADLMSLWRR 182
Query: 144 ALAAEN--------------------------------PNIET------CEFFENYEKAA 165
E P+IE C + EN E
Sbjct: 183 VQYEETHQTKAREFTIEFEGTDSNPQRQAPSTSAVERVPDIEEYNSMGLCGYHENMENVW 242
Query: 166 SAAVLPPGVYTLQDLRAF---------GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPK 216
+ ++P GVYTL+ L+ GK CPYF+AR ++ AN+VV +YQY++DPK
Sbjct: 243 NRTLVPAGVYTLEGLKEHCNNFKNPTNGKPAPICPYFMARRCIEMANIVVLNYQYMIDPK 302
Query: 217 VAGII------SKEMQKES----VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
V+ + K Q +S VVVFDEAHNIDNVCIEALSV + +TL+ A +L+ +
Sbjct: 303 VSESVFSHFSTDKSKQTKSKLPIVVVFDEAHNIDNVCIEALSVELNGETLDQAYTDLAHL 362
Query: 267 NQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEH 326
+ I + D L EYN+L+E L + ++S P LP DIL +AVPG+IR+AEH
Sbjct: 363 EENIRVLREKDEDALLQEYNKLLENLKMDTLDIEGYMS-PVLPDDILMKAVPGSIRKAEH 421
Query: 327 FLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEI 386
F+ L+ ++ YL+ ++ + EGP+ F+ I +T++ Y R+ SL+ TL++
Sbjct: 422 FISYLKIIIGYLKKYIKVFEAKSEGPLMFLYRFEHETDILAETMQHTYNRMKSLLNTLKM 481
Query: 387 TDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
T + +Q + DF TLVGTY+ GF +I++P+ I DP+LQ SC DAS+A++PV
Sbjct: 482 TSVGDISSLQLVVDFCTLVGTYSAGFIVIVDPYPNG--SIYDPLLQFSCLDASIAMRPVL 539
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+ F+SV++TSGT+SP++ YP++LNF PV+++S MS RDC+CP+++++G++Q+ +ST+F
Sbjct: 540 EGFRSVILTSGTISPLEFYPKILNFTPVLTQSLPMSFDRDCLCPIIVSKGANQVQMSTRF 599
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
D+R+D V RNYG LL++ +PDGIVCFF SY+YM+ I++ W + GIL IM+HKL+F
Sbjct: 600 DLRTDVTVLRNYGSLLIDFCKHIPDGIVCFFPSYAYMELILSHWYECGILSSIMEHKLIF 659
Query: 567 IETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
+ETQD V TTLAL NYRKACD GRGAVF SV RGKVAEGIDFDRHYGR V++ G+PFQYT
Sbjct: 660 METQDAVSTTLALYNYRKACDVGRGAVFMSVCRGKVAEGIDFDRHYGRCVVLVGIPFQYT 719
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
LS++L ARL+++R + I E +F+TFDA+RQAAQCVGR+IR+K D+G+M+FAD RYSR D
Sbjct: 720 LSRVLKARLDFMRCNYGISENEFITFDAMRQAAQCVGRIIRNKNDFGLMVFADARYSRID 779
Query: 687 KRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY 726
KRSKLP WIL ++ ++L LST+ A+ +A+ F R MAQ Y
Sbjct: 780 KRSKLPPWILKNIEPSNLFLSTESAVAVAKAFFRNMAQDY 819
>gi|401882732|gb|EJT46976.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 2479]
Length = 794
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/757 (46%), Positives = 506/757 (66%), Gaps = 63/757 (8%)
Query: 1 MIFKLEDVTVYFPYDNI--------------------------YPEQYSYMLELKRALDA 34
M F ++D+ V FPY+++ YSYM +LK+ LDA
Sbjct: 1 MKFMIDDLPVLFPYESLPHGLDLLAGLPMLPPRPVTIVVVHADKDHDYSYMCDLKKTLDA 60
Query: 35 KGHCLLEMPTGTGKTIALLSLITSYV-LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNY 93
MP+GTGKT++LLSLI SY+ E KLIYC+RTV E+EK LAELK L Y
Sbjct: 61 G------MPSGTGKTVSLLSLIISYMQFYGGEKKRKLIYCSRTVPEIEKALAELKRLMEY 114
Query: 94 QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP-NI 152
+ +GL+SRKNLC+N + VD+ CR T+S+ +P ++
Sbjct: 115 REDMGAKDTGFRGLGLTSRKNLCLNPE---EKKGKVVDSRCRDMTSSFACEKGRADPGSV 171
Query: 153 ETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYL 212
+ C + E ++P GV+TL D++ +G+++G CPYF R M+ + +V++YS+ YL
Sbjct: 172 QLCSWHEELNNYEPGHLIPEGVWTLDDVKKYGQEKGVCPYFTIRRMMPYVDVIIYSFHYL 231
Query: 213 LDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIER 272
LDPKVA +S E+ KE++VVFDEAHNI A R++++I +I+
Sbjct: 232 LDPKVAEQVSAELSKEAIVVFDEAHNI-------------------AARSVAKIGDKIDE 272
Query: 273 FKATDAGRLRAEYNRLVEGLALRGNL--PNAWLSNPALPSDILKEAVPGNIRRAEHFLHV 330
K +DA +L AEY +LV+GLA + + LSNP L D+++EA+PGNIR+AEHF+
Sbjct: 273 IKKSDAEKLNAEYQKLVDGLAAANDRREEDDMLSNPVLSEDMIQEAIPGNIRKAEHFIAF 332
Query: 331 LRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
L+R ++YL+ R+ +V E P SF+A + I+++ L+FC ERL SL+ TLE+T+ D
Sbjct: 333 LKRFIEYLKTRMRVLHVVAETPQSFMAHLKEITFIEKRPLQFCAERLTSLIRTLELTNLD 392
Query: 391 EFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQ 450
E +Q I F TLV TY +GF +I+EP++ +P+P+ +C D SLA+ PVF+RF
Sbjct: 393 EHFALQKIASFGTLVATYEKGFLLILEPYETEHATVPNPIFHFTCLDPSLAMAPVFERFS 452
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
SV+ITSGT+SP+D+YP++L F PV+ S+ M+LTR+ PMV+TRGSDQ+P+S++F++R+
Sbjct: 453 SVIITSGTISPLDMYPKMLQFQPVIQESYPMTLTRNAFLPMVITRGSDQVPISSRFEVRN 512
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ 570
DP V RN+G +L++M VPDG+V FF SY YM+ I++ W D GIL E+ +HKL+F+ET
Sbjct: 513 DPAVVRNFGSILIDMAKTVPDGVVAFFPSYLYMESIVSAWYDMGILSEVWKHKLLFVETP 572
Query: 571 DVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
D +ET++AL NYR+AC+ GRGAV SVARGKV+EGIDFD +YGR VIMFG+P+QYT S+I
Sbjct: 573 DAMETSIALKNYREACNNGRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRI 632
Query: 631 LLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK 690
L ARLE+LRD +I+E D+LTFDA+R AAQCVGRV+R K D+G+M+FADK DKR+K
Sbjct: 633 LKARLEFLRDNHRIRENDYLTFDAMRHAAQCVGRVLRGKTDWGLMVFADK-----DKRAK 687
Query: 691 LPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYD 727
LP WI ++ DAH NLSTDMA+ +A++F+R ++QP+D
Sbjct: 688 LPRWINQYITDAHSNLSTDMAVVLAKKFIRNISQPFD 724
>gi|400593003|gb|EJP61017.1| DNA repair helicase RAD3 [Beauveria bassiana ARSEF 2860]
Length = 749
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/706 (49%), Positives = 483/706 (68%), Gaps = 9/706 (1%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT++LLSLI +Y S PE KLIYC+RT+ E+EK L EL+ L Y+T LG
Sbjct: 1 MPSGTGKTVSLLSLIVAYQQSMPEKR-KLIYCSRTMSEIEKALMELEALMKYRTEQLGHE 59
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
+GL+SRKNLC++ V ++ VDA CR TA +V+ N++ C + +N
Sbjct: 60 EDFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKERGENVDLCVYHDNL 119
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+ S ++P GV+T + +G++ CPYF AR M+Q+ NVV++SY YLLDPK+A +
Sbjct: 120 DLLESHNLIPNGVWTFDGILRYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERV 179
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
+K+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR + Q+I + TD +L
Sbjct: 180 TKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRRATRGAQNLKQKIADMRETDQEQL 239
Query: 282 RAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR 339
+ EY +LV+GL A +A+++NP LP ++L+EAVPGNIRRAEHF+ L+R ++YL+
Sbjct: 240 QNEYEKLVQGLREADEARQEDAFMANPVLPEELLREAVPGNIRRAEHFVSFLQRFIEYLK 299
Query: 340 GRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC 399
V E P SF+A + H I++K L FC ERL SL+ TLE+T+ D++ +Q +
Sbjct: 300 A---GAPVISETPPSFLAHLKEHTFIEKKPLGFCAERLTSLVRTLELTNIDDYQPLQEVA 356
Query: 400 DFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTL 459
FATLV TY +GF +I+EP++ +P+P+L +C DA++A++PVFDRF SV+ITSGT+
Sbjct: 357 TFATLVATYDKGFLLILEPYESDTAEVPNPILHFTCLDAAIAIRPVFDRFYSVIITSGTI 416
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
SP+++YP++L+F V+ S+ M+L R PM++TRGSDQ +ST F +R++P V RNYG
Sbjct: 417 SPLEMYPKMLDFSTVIQESYSMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYG 476
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
LL E I PDG+V FF SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL
Sbjct: 477 NLLTEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLAL 536
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
+ YR AC GRGA+ VARGKV+EGIDFD YGR V+ GVPFQYT S+IL ARLE+LR
Sbjct: 537 ETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLR 596
Query: 640 DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ + KR +LP WI L
Sbjct: 597 ETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQK--KRPQLPKWINQGL 654
Query: 700 RDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
D +NLSTDMA+ AR FL+ MAQP+ G T DLE+
Sbjct: 655 MDVDVNLSTDMAVSSARRFLKTMAQPFRAKEQEGIST-WGYEDLER 699
>gi|313247490|emb|CBY15705.1| unnamed protein product [Oikopleura dioica]
Length = 760
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/739 (47%), Positives = 509/739 (68%), Gaps = 12/739 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +E + V FP+D +YPEQ +YM ELK +++ +GH L+EMP GTGKT+ +LS + +Y
Sbjct: 1 MHLDIEGIPVLFPFDYVYPEQLAYMRELKYSIENRGHALIEMPCGTGKTVTILSFLLAYK 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNY---QTRHLGPAAKILAIGLSSRKNLCV 117
+ P + K+IYCTRTV E+ K + EL+ L + +HL IL++ LSSR+NLC+
Sbjct: 61 KAHPASLEKIIYCTRTVPELTKVVEELRDLVKFYADNDQHL----DILSMSLSSRQNLCI 116
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIE--TCEFFENYEKAASAAVLPPGVY 175
NS V + R VD CR+RTA++ R A +PN E +C +FEN E + +A LP +Y
Sbjct: 117 NSEVTSCGGRIEVDTECRRRTATFARRNAKMSPNAENPSCSYFENLENSTLSAKLPRTIY 176
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
L+D++ FGK++ CPYF+AR + A+VV+YSY YLLDPK++ ++SK + + S+VVFDE
Sbjct: 177 NLEDIKEFGKEETICPYFMAREAINLADVVIYSYNYLLDPKISSVVSKSLPRNSIVVFDE 236
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL-AL 294
AHNID+VCI++LSV + ++T+E A+ L ++ ++ F + L EY+RLV GL
Sbjct: 237 AHNIDSVCIKSLSVKITKRTIERASDGLEKLTARVDEFSISKKEELEDEYDRLVRGLREA 296
Query: 295 RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
R N P LP D+L A+PG+IR+A F ++RL++Y RL + +E P+S
Sbjct: 297 RQNEDAGLGGPPILPDDVLTTAIPGSIRKAPIFCKWVKRLLEYCGHRLRIQQAIQESPLS 356
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
F+ I ID+K+LR ERL +L++TLE+ D + I + A L TYT GF+I
Sbjct: 357 FLRDIEERVCIDRKSLRIAGERLQNLIITLEMVDLSGLKEVNDIINMAALAATYTEGFAI 416
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPV 474
+ E DER IPDP +QL+C DASL ++P+F ++QSV+ITSGTLSPI++YPRLL+F PV
Sbjct: 417 LFEAIDER--GIPDPRIQLACLDASLVMRPIFRKYQSVLITSGTLSPIEMYPRLLDFQPV 474
Query: 475 VSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIV 534
V S +S+ R ICPM++ RG+DQ+ +S+KFD R DP V RNYG LLVE+ +VPDG+V
Sbjct: 475 VMTSLALSMARGAICPMIVARGNDQVSLSSKFDEREDPSVLRNYGNLLVEICGVVPDGVV 534
Query: 535 CFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVF 594
FF SYSY++ +++ WN++GI++ I ++K++F E+ D+ ET+ AL YR+ACD GRGAV
Sbjct: 535 VFFTSYSYLENVVSMWNETGIIEGIQKNKIIFCESSDITETSQALSRYREACDEGRGAVL 594
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDA 654
SVARGKV+EGIDF HYGR V++ G+PF +T S+IL ARL++LR Q++E +FL FDA
Sbjct: 595 LSVARGKVSEGIDFSGHYGRAVLVLGIPFIFTQSRILRARLDFLRTKIQVREQEFLVFDA 654
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHI 714
+RQ AQC+GR IR+K+DYG+M+ AD R+ K +KLP W+ L L+LS + ++ +
Sbjct: 655 MRQTAQCLGRAIRAKSDYGIMLLADVRFGTPGKYNKLPKWLTDSLSQGSLSLSIEDSIAL 714
Query: 715 AREFLRKMAQPYDKAGSIG 733
+++FLR+MAQP+ ++ +G
Sbjct: 715 SKKFLRQMAQPFPRSAQLG 733
>gi|226289058|gb|EEH44570.1| DNA repair helicase RAD3 [Paracoccidioides brasiliensis Pb18]
Length = 791
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/741 (48%), Positives = 487/741 (65%), Gaps = 60/741 (8%)
Query: 7 DVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPEN 66
D+ V FPY IYPEQY+YM +LK+ LD GHC+LEMP+GTGKT++LLSLI +Y KPE
Sbjct: 55 DLPVLFPYPRIYPEQYAYMCDLKKTLDTGGHCVLEMPSGTGKTVSLLSLIIAYQQHKPEQ 114
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
KLIYC+RT+ E+EK LAELK L Y+ + LG +GL+SRKNLC++ V ++
Sbjct: 115 R-KLIYCSRTMSEIEKALAELKALMKYRAQQLGYTEDFRGLGLTSRKNLCLHPSVKREKS 173
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQ 186
VDA CR TA +V+ ++E C +
Sbjct: 174 GTIVDARCRSLTAGFVKEKKERGEDVELCIY----------------------------- 204
Query: 187 QGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEA 246
H + F NV++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNIDNVCIE+
Sbjct: 205 ----------HEMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIES 254
Query: 247 LSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLS 304
LS+ + +L A+R + + + I+ K++DA +L+ EY +LVEGL A ++
Sbjct: 255 LSIDLTEDSLRKASRGANNLERRIDEMKSSDAEKLQNEYQKLVEGLREADEARQEEQLMA 314
Query: 305 NPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAG 364
NPALP D+LKEAVPGNIRRAEHF+ L+R ++YL+ R++ + E P SF+A +
Sbjct: 315 NPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVTHTISETPPSFLAHLKDLTF 374
Query: 365 IDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP 424
I++K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY +GF +I+EPF+
Sbjct: 375 IERKPLRFCAERLTSLVRTLELMNLEDYQPLQQVAAFATLAATYEKGFLLILEPFESDTA 434
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
+P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L F V+ S+ M+L
Sbjct: 435 TVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLGFTTVLQESYSMTLA 494
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
R PM++TRGSDQ +S+ F +R+DPGV RNYG LL+E I PDGIV FF SY YM+
Sbjct: 495 RRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYME 554
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
II+ W +ET D E++LAL+ YR AC GRGA+ VARGKV+E
Sbjct: 555 SIISMWQ---------------VETPDSQESSLALETYRTACCNGRGAILLCVARGKVSE 599
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDFD HYGR VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GR
Sbjct: 600 GIDFDHHYGRTVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGR 659
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
V+R K DYG+M+ AD+R+ + KR++LP WI + ++ NLSTDMA+ A+ FLR MAQ
Sbjct: 660 VLRGKDDYGVMVLADRRFQK--KRAQLPKWISQAMLESETNLSTDMAMATAKSFLRTMAQ 717
Query: 725 PYDKAGSIGRKTLLSQADLEK 745
P+ G T S ADLE+
Sbjct: 718 PFKSKDQEGIST-WSIADLER 737
>gi|358338885|dbj|GAA57512.1| DNA excision repair protein ERCC-2, partial [Clonorchis sinensis]
Length = 731
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/714 (50%), Positives = 492/714 (68%), Gaps = 43/714 (6%)
Query: 36 GHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQT 95
GH +LEMP+GTGKT++LLSLI +Y+ ++P K IYC+RTV E+EK + ELK+LH Y
Sbjct: 1 GHGVLEMPSGTGKTVSLLSLIVAYMKARPGAIEKFIYCSRTVPEIEKVVEELKVLHKYYA 60
Query: 96 RHLGP-AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIET 154
+LAI LSSRKNLC+ V A + +VDAAC + TAS+VR A + + +
Sbjct: 61 AETNEDGCGLLAIALSSRKNLCIERDVRRAGDGAAVDAACFRLTASFVRKKHASDASTPS 120
Query: 155 CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLD 214
C+F+E + AN++VYSY YLLD
Sbjct: 121 CKFYE---------------------------------------IMHANIIVYSYFYLLD 141
Query: 215 PKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
PK+A ++S+++ K SV+VFDEAHNIDNVCIE++S + R++LE AT +L+R+ ++ K
Sbjct: 142 PKIANLVSRDLPKNSVIVFDEAHNIDNVCIESMSCVLTRRSLEKATTSLNRLTDRVKDVK 201
Query: 275 ATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLR 332
+A RL+ EY RLVEGL A + L+NP LP +IL+EAVPG++R A+ FL LR
Sbjct: 202 QHNAERLKEEYRRLVEGLRQAQVAKETDQVLANPILPDEILREAVPGSLRSADSFLAFLR 261
Query: 333 RLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEF 392
R ++Y++ RL +V E PV+F+ +D++ L+FC ERL SL+ TLE+ D EF
Sbjct: 262 RFLEYVKLRLRIAHVVHETPVAFLRDCLEKVCVDRRPLQFCAERLRSLLNTLELADYAEF 321
Query: 393 LHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSV 452
+ +C+FATLV TYTRGF +IIEPFDER P + +PVL C DASL ++PVF RF SV
Sbjct: 322 SSLTLLCNFATLVATYTRGFCLIIEPFDERSPTVINPVLYFYCMDASLPIRPVFSRFASV 381
Query: 453 VITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDP 512
+ITSGTLSP+D+YPR+L+FHPV S SF M+L R C+ PM++++G+DQ+P++TKF+ R D
Sbjct: 382 IITSGTLSPLDMYPRILDFHPVNSASFTMTLARSCVLPMIVSKGNDQVPMTTKFESREDM 441
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
V RNYG LL ++ S+VPDGIV FF SY Y++ ATW + ++++I +HKL+F+ETQD
Sbjct: 442 AVVRNYGHLLAQLASVVPDGIVAFFPSYHYLESTFATWYEQHLIEQIQRHKLLFVETQDA 501
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
ET+LAL Y +AC+ GRGAV SVARG+V+EGIDFD H GR VIMFGVP+ YT S+I
Sbjct: 502 EETSLALAAYHRACENGRGAVLLSVARGRVSEGIDFDHHLGRCVIMFGVPYVYTQSRIFK 561
Query: 633 ARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
ARL++LR+ + I+ +F+TFDA+R AAQC+GR IR K+DYG+MI ADKRY+R DKRSKLP
Sbjct: 562 ARLDFLREQYNIQPNEFITFDAMRHAAQCLGRAIRGKSDYGVMILADKRYARADKRSKLP 621
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
GWI S L+DA +NLST+ A+ +R FLR M QP++K +G LL++ + K+
Sbjct: 622 GWIQSQLQDAFVNLSTEEAVQASRRFLRLMGQPFNKEDQLG-LALLTREHVAKL 674
>gi|116204809|ref|XP_001228215.1| hypothetical protein CHGG_10288 [Chaetomium globosum CBS 148.51]
gi|88176416|gb|EAQ83884.1| hypothetical protein CHGG_10288 [Chaetomium globosum CBS 148.51]
Length = 732
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/705 (49%), Positives = 480/705 (68%), Gaps = 44/705 (6%)
Query: 24 YMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKT 83
YM++LK+ LDA G+C+LEMP+GTGKT+ LLSLI +Y P + KLIYC+RT+ E+EK
Sbjct: 7 YMVDLKKTLDAGGNCVLEMPSGTGKTVTLLSLIVAYQQYYPSHR-KLIYCSRTMSEIEKA 65
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
L ELK L ++T LG + +GL+SRKNLC++ V ++ + VDA CR TA +V+
Sbjct: 66 LVELKALMKFRTERLGHEEEFRGLGLTSRKNLCLHPSVRREKSGNVVDARCRSLTAGFVK 125
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+ ++E C VY H +Q+ N
Sbjct: 126 EKKEKGEDVEVC------------------VY---------------------HDMQYCN 146
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
V++YSY YLLDPK+A +SK++ K+ +VVFDEAHNIDNVCIE+LS + +L ATR
Sbjct: 147 VIIYSYHYLLDPKIAERVSKDLSKDCIVVFDEAHNIDNVCIESLSTDITDDSLRRATRGA 206
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+ +I + +D +L+ EY +LVEGL A G +++++NP LP D+LKEAVPGNI
Sbjct: 207 QNLENKINEMRDSDKQKLQDEYEKLVEGLRGADDGRQEDSFMANPTLPDDLLKEAVPGNI 266
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM 381
RRAEHF+ LRR ++YL+ R++ V E P SF++ + H I++K LRFC ERL SL+
Sbjct: 267 RRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLSHLKEHTFIEKKPLRFCAERLTSLV 326
Query: 382 LTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
TLE+T+ +++ +Q + FATLV TY +GF +I+EPF+ +P+PVL +C DA++A
Sbjct: 327 RTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESDTAEVPNPVLHFTCLDAAIA 386
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+KPVFDRF SVVITSGT+SP+++YP++L+F VV S+ M+L R PM++TRGSDQ
Sbjct: 387 IKPVFDRFSSVVITSGTMSPLEMYPKMLDFPTVVQESYSMTLARRSFLPMIVTRGSDQAS 446
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ST F +R++P V RNYG LL E I PDG+V FF SY YM+ II+ W GIL E+ +
Sbjct: 447 ISTSFQVRNEPSVVRNYGSLLTEFAKITPDGLVVFFPSYLYMESIISMWQGMGILDEVWK 506
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
+KL+ +ET D ET+LAL+ YR AC GRGAV VARGKV+EGIDFD YGR V+ GV
Sbjct: 507 YKLILVETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGV 566
Query: 622 PFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
PFQYT S+IL ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R
Sbjct: 567 PFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGLMVLADRR 626
Query: 682 YSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY 726
+ + KR++LP WI L DA +NLSTDMA+ AR FLR MAQP+
Sbjct: 627 FQK--KRAQLPKWINQALLDADVNLSTDMAVSSARRFLRTMAQPF 669
>gi|302666624|ref|XP_003024909.1| hypothetical protein TRV_00914 [Trichophyton verrucosum HKI 0517]
gi|291188986|gb|EFE44298.1| hypothetical protein TRV_00914 [Trichophyton verrucosum HKI 0517]
Length = 765
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/713 (47%), Positives = 487/713 (68%), Gaps = 21/713 (2%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKTI LL+LI +Y PE+ KLIYC+RT+ E+EK L+EL+ L Y+++ LG
Sbjct: 1 MPSGTGKTITLLALIVAYQQHYPEHR-KLIYCSRTMSEIEKALSELRALMKYRSQKLGVV 59
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETC------ 155
A+GL+SRKNLC++ V ++ VDA CR TA +++ + ++E C
Sbjct: 60 EDFRALGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFIKEKKEKGEDVELCIYHEVR 119
Query: 156 ----------EFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+ +N + + ++PPGV+TL L +G+Q CPYF AR M+ + NV+
Sbjct: 120 SSSPISRSKADLLQNLDLLEPSNLVPPGVFTLDGLLKYGEQHKQCPYFSARRMMPYCNVI 179
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+YSY YLLDPK+A +SKE+ ++S++VFDEAHNIDNVCIE+LS+ + +L A+R +
Sbjct: 180 IYSYHYLLDPKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRKASRGANN 239
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA--WLSNPALPSDILKEAVPGNIRR 323
+ ++I+ K++DA +L+ EY +LVEGL ++NP LP D+LKE+VPGNIRR
Sbjct: 240 LERKIDDMKSSDADKLQNEYQKLVEGLREADEAREEEQLMANPVLPDDLLKESVPGNIRR 299
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF+ L+R ++YL+ R++ + E P+SF++ + I++K LRFC ERL SL+ T
Sbjct: 300 AEHFVAFLKRFIEYLKTRMKVTHTISETPLSFLSHLKDLTFIERKPLRFCAERLTSLVRT 359
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LE+ + +++ +Q + FATL TY +GF +I+EPF+ +P+P+L +C DA++A+K
Sbjct: 360 LELVNIEDYQPLQEVATFATLAATYEKGFLLILEPFESDTATVPNPILHFTCLDAAIAIK 419
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
PVFDRF SV+ITSGTLSP+++YP++L F + S+ M+L R PM++TRGSDQ +S
Sbjct: 420 PVFDRFSSVIITSGTLSPLEMYPKMLGFDAALQESYSMTLARRSFLPMIVTRGSDQAQIS 479
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
+ F +R+DPGV RNYG +L+E I PDG+V FF SY YM+ II+ W GIL + +K
Sbjct: 480 SSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFPSYLYMESIISMWQGMGILDSVWNYK 539
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+ +ET D E++LAL+ YR AC GRGAV VARGKV+EGIDFD HYGR V+ GVPF
Sbjct: 540 LILVETPDSQESSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHHYGRTVLCIGVPF 599
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
QYT S+IL ARLE+LR+ ++I+E DFL+FDALR AAQC+GRV+R K DYG+M+ AD+R+
Sbjct: 600 QYTESRILKARLEFLRENYRIRENDFLSFDALRHAAQCLGRVLRGKDDYGVMVLADRRFQ 659
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKT 736
+ KR++LP WI + ++ NLSTDMA+ A+ FL+ MAQP+ G T
Sbjct: 660 K--KRNQLPKWISQAMLESETNLSTDMAVATAKSFLKSMAQPFKAKDQEGIST 710
>gi|397624872|gb|EJK67551.1| hypothetical protein THAOC_11394 [Thalassiosira oceanica]
Length = 797
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/814 (46%), Positives = 507/814 (62%), Gaps = 110/814 (13%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M LKR LDA GH LLEMPTGTGKT+ LLSLITSY + P KL+YCTRTV EM+ +
Sbjct: 1 MRALKRTLDAGGHSLLEMPTGTGKTVCLLSLITSYQHANP-GCGKLVYCTRTVPEMDSVM 59
Query: 85 AELKLLHNYQ-------------------------------------------------- 94
EL + Y+
Sbjct: 60 QELGNVLGYRSEMLKKEREAAEAAAEAEGGDEGMDGEGPGGDQGESRKRKRDDPPRPKSN 119
Query: 95 --TRHLGPAAKILAIGLSSRKNLC--------VNSRVLAAENRDSVDAACRKRTASWV-- 142
T +GP + G + LC +N RVL +R+ +D+ACR TASW
Sbjct: 120 NDTHRMGPITQDGGAGGNGSLALCLSSRRNMCINKRVLRESDREGIDSACRSLTASWALE 179
Query: 143 ----------------RALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQ 186
A A + C +F+ + +A A +P G+Y L+ L+ +GK
Sbjct: 180 ARKKKSGRGGPPGGSGTAAARGGDDENCCTYFDQFREAGEAISMPSGIYDLESLKEWGKG 239
Query: 187 QGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEA 246
+GWCPY+L R + ANV+ ++YQY+LDPKVA ++SKE++ ES+VVFDEAHNID+VCIEA
Sbjct: 240 RGWCPYYLTRQAINHANVLCFNYQYMLDPKVAKMVSKELEAESIVVFDEAHNIDSVCIEA 299
Query: 247 LSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA----W 302
SVS+ ++LE ATR+L R++ EI R KA+DA RLR EY LV+GL +G L A
Sbjct: 300 FSVSIHARSLEQATRSLGRLSGEINRVKASDASRLRNEYQNLVQGLVEQGLLGGASDEVA 359
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE-----TENVEKEGPVSFVA 357
L + L +D++ EAVPGNIRRAEHF+ ++++V++L+ RL T V E P++F+
Sbjct: 360 LESSVLSNDVISEAVPGNIRRAEHFVAFMKKVVEHLKARLRTVGGPTGGVSSETPLAFLH 419
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG---FSI 414
+ G++ K L+F Y RL SL+ TL++T D+F + + D A+LV TY G F+I
Sbjct: 420 RMVTATGVEAKPLKFAYTRLSSLLRTLQVTSLDDFRSLTDVADLASLVATYAEGLPRFAI 479
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPV 474
I+EP + + +P ++L+C D+SLA+ P+F RF SV+ITSGTLSPIDLYP+LL F P
Sbjct: 480 IMEPVGQ----LSEPSIELACLDSSLAIAPLFKRFGSVIITSGTLSPIDLYPKLLQFEPC 535
Query: 475 VSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIV 534
VS SF MS R CI P+++TRGSDQLPVSTKF R D GV RNYG +LVE+ + VPDG+V
Sbjct: 536 VSESFSMSTFRPCIRPLIITRGSDQLPVSTKFQDRGDLGVVRNYGSMLVEVCAAVPDGVV 595
Query: 535 CFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVF 594
FF SY+YM+ II+ W+ GI++ + + KL+F+ET+DVVETTLALDNYR+ACD GRGA+F
Sbjct: 596 AFFTSYAYMESIISEWDGMGIMRRLAKSKLIFVETKDVVETTLALDNYRRACDSGRGAIF 655
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDA 654
S+ARGKV+EGI+FDRHYGR VI+FGVPFQYTLS IL ARLE+L+ +QI+E DFL FDA
Sbjct: 656 LSIARGKVSEGINFDRHYGRAVIIFGVPFQYTLSHILRARLEFLQSQYQIREQDFLNFDA 715
Query: 655 LRQAAQCVGRVIR--SKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
LRQA+QCVGRVI K G+ F L +I+ D LNLSTD A+
Sbjct: 716 LRQASQCVGRVISFWGKCVGGIGSF---------HTGNLSEFIMPS--DGQLNLSTDTAV 764
Query: 713 HIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
A+ FLR MAQP D+ ++ LL++ ++ ++
Sbjct: 765 AQAKSFLRIMAQPVDQNAL--KQVLLTEEEVRRL 796
>gi|12835975|dbj|BAB23443.1| unnamed protein product [Mus musculus]
Length = 593
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/561 (58%), Positives = 433/561 (77%), Gaps = 2/561 (0%)
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
LP G+Y L DL+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++
Sbjct: 3 LPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKA 62
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
VVVFDEAHNIDNVCI+++SV++ R+TL+ NL + + + R K TD RLR E RLV
Sbjct: 63 VVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDECRRLV 122
Query: 290 EGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL A +A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V
Sbjct: 123 EGLREASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHV 182
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
+E P +F++ + I +K LRFC ERL SL+ TLEI D +F + + +FATLV T
Sbjct: 183 VQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVST 242
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y +GF+IIIEPFD+R P I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP+
Sbjct: 243 YAKGFTIIIEPFDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPK 302
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+L+FHPV +F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM +
Sbjct: 303 ILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSA 362
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
+VPDGIV FF SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+
Sbjct: 363 VVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACE 422
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GRGA+ SVARGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E
Sbjct: 423 NGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIREN 482
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
DFLTFDA+R AAQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL D++LNL+
Sbjct: 483 DFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLT 542
Query: 708 TDMALHIAREFLRKMAQPYDK 728
D + +A+ FLR+MAQP+ +
Sbjct: 543 VDEGVQVAKYFLRQMAQPFHR 563
>gi|393910719|gb|EJD76012.1| Ercc2 protein [Loa loa]
Length = 705
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/708 (49%), Positives = 486/708 (68%), Gaps = 22/708 (3%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
MP+GTGKT++LLSL+ +Y+L P++ KL+YC+RT+ E+EK + EL+ L Y + G
Sbjct: 1 MPSGTGKTVSLLSLVVAYMLRFPDHLDKLVYCSRTIPEIEKCVEELRNLFKYYEQCDGKP 60
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
+ A+ LS+RKNLC+N V + VD AC+K TAS+VRA P++ C FFE
Sbjct: 61 PSLFAVALSARKNLCINESVSSLRQGSLVDGACQKLTASFVRAKRKLRPDLPCCTFFEKL 120
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
++ L GVY LQ+LR G+Q G CPYFL+R++V A++VVYSY Y+LDPK+A ++
Sbjct: 121 DEQEDFNHLD-GVYNLQNLRKLGQQNGICPYFLSRNVVDRAHIVVYSYHYILDPKIAELV 179
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
SK + S VVFDEAHNIDNVCIE++SVS+ + T+E AT+ L + + ++R + ++ +L
Sbjct: 180 SKNFSRHSCVVFDEAHNIDNVCIESMSVSLTKTTVEKATQKLGILEEHVQRLREENSEQL 239
Query: 282 RAEYNRLVEGLAL----RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY 337
R EY+RLVEGL R N + L+NP LP ILKEAVPG IR A HF+ LRR +Y
Sbjct: 240 RVEYDRLVEGLKRVEEERTN--DQVLANPVLPDMILKEAVPGTIRNALHFISFLRRFNEY 297
Query: 338 LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
L+ R+ T+ V E P +F+ I ID++ LRFC ER SL TLE+ D +F +
Sbjct: 298 LKHRMRTKTVLIENPAAFLRDINDLMHIDRRPLRFCAERFASLTRTLELADISDFSSLVL 357
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
I +FATLV TY RGF+I+IEP DE+ L LSC DAS+A++P+F R+++VVITSG
Sbjct: 358 ITNFATLVSTYARGFTIVIEPLDEKSGIGHSCTLHLSCMDASVAIRPIFQRYRTVVITSG 417
Query: 458 TLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARN 517
TLSP+D+YP++L+F P V S M+L R CI P+++++G+DQ+ ++++F+ R D V RN
Sbjct: 418 TLSPLDMYPKILDFDPAVMASLSMTLARPCIAPLIVSKGNDQVAMTSRFESREDAAVIRN 477
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTL 577
YG L++E+VS+VPDG+V F GI+ E++++KL+FIET D +ET++
Sbjct: 478 YGSLVLELVSLVPDGVVVFL---------------PGIIDELLKYKLLFIETTDALETSI 522
Query: 578 ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
AL+ Y +ACDCGRGAVFFSVARGKV+EGIDF H GR VIM GVP+ YT S+IL ARLEY
Sbjct: 523 ALEKYVEACDCGRGAVFFSVARGKVSEGIDFSHHLGRAVIMLGVPYVYTESRILRARLEY 582
Query: 638 LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
LR+ I+E DFLTFDA+RQAAQC+GR +R K+DYG+MIFADKR+SR DK KLP WI
Sbjct: 583 LREQLGIRENDFLTFDAMRQAAQCMGRALRGKSDYGLMIFADKRFSRKDKMGKLPRWIQE 642
Query: 698 HLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
++ ++NLS + A IAR++ MAQ + K +G L + EK
Sbjct: 643 YITPGNVNLSIEEAAIIARKWFPLMAQSFTKDHQLGISLLTEEMLREK 690
>gi|41055526|ref|NP_957220.1| TFIIH basal transcription factor complex helicase subunit [Danio
rerio]
gi|29437217|gb|AAH49410.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Danio rerio]
Length = 643
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/616 (54%), Positives = 446/616 (72%), Gaps = 2/616 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KL+YC+RTV E+EK + EL+ L +Y ++ G LA+ LSSRKNLC++
Sbjct: 61 KTYPLEVTKLVYCSRTVPEIEKVVEELRKLMDYYSKQTGVKNDFLALALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C TAS++RA NPN C+F+E ++ +PPG+Y L DL
Sbjct: 121 VSSLRFGKEVDGKCHSLTASYIRAQHQSNPNQPVCQFYEEFDNVGRQVPIPPGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++GWCPYFLAR+ + AN+VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KDFGRRKGWCPYFLARYALLHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ N+ + I R K TDA +LR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNITRRTLDRCQTNVETLQNTISRIKETDAAKLREEYRRLVEGLKEANVARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ +LSNP LP +IL+EAVPG+IR AEHF+ ++R ++YL+ RL +V +E F+
Sbjct: 301 TDIYLSNPVLPDEILQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKD 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I ID+K LRFC ERL SL+ TLEI D +F I I FATLV TY++GF+IIIEP
Sbjct: 361 IFEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSPITLISHFATLVSTYSKGFTIIIEP 420
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+++ P I +PVL SC D S+A+KPVF RFQ+V+ITSGTLSP+D+YPR+L+F PV S
Sbjct: 421 FEDKTPTIANPVLHFSCMDPSIAIKPVFGRFQTVIITSGTLSPLDIYPRILDFRPVTMAS 480
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F M+L R C+CP+++ RG+DQ+ +++KF+ R D V RNYG LL+EM +IVPDGIV FF
Sbjct: 481 FTMTLARTCLCPLIVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT 540
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ I+A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVA
Sbjct: 541 SYMYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA 600
Query: 599 RGKVAEGIDFDRHYGR 614
RGKV+EGIDF H+ R
Sbjct: 601 RGKVSEGIDFVHHHVR 616
>gi|156083623|ref|XP_001609295.1| DNA excision repair helicase [Babesia bovis T2Bo]
gi|154796546|gb|EDO05727.1| DNA excision repair helicase [Babesia bovis]
Length = 822
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/791 (46%), Positives = 514/791 (64%), Gaps = 71/791 (8%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F L+ + V+FPY IYPEQ +Y+ LK LDA+GH +LEMPTGTGKT+AL SLITSY L+
Sbjct: 4 FWLDGIEVFFPYPQIYPEQLAYLRSLKSTLDAQGHAVLEMPTGTGKTVALFSLITSYQLA 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-----------------PAAKIL 105
+PE +LIYCTRT+ EMEK+L ELK + Y+ L P+++
Sbjct: 64 RPEMG-RLIYCTRTIPEMEKSLLELKEVIKYRDAELEKDRVAMEASSTSDSTGEPSSQSG 122
Query: 106 AIGLSSRKNLC-VNSRVLAAENRD-SVDAACRKRTASWVRALAA----------ENPNIE 153
+ +R +L V R+ E + S D + + V+ + E P+IE
Sbjct: 123 SSNTKNRHDLTSVWRRIEYEEGKPPSSDEHVLRFDGTSVQGVPTAPVVHHSRVEELPDIE 182
Query: 154 ------TCEFFENYEKAASAAVLPPGVYTLQDLRAF---------GKQQGWCPYFLARHM 198
C +E E+ + ++P GVYTL+ L+ + G CPYF AR
Sbjct: 183 HYTTMGLCGHYEYLERVWNPTMIPSGVYTLEGLKEYCSNFRHPLSGVSTPICPYFAARRA 242
Query: 199 VQFANVVVYSYQYLLDPKVAGII----------SKEMQKES-------------VVVFDE 235
+ ANVVV +YQYLLDPKV+ S++ +K++ VVVFDE
Sbjct: 243 LDIANVVVLNYQYLLDPKVSEAAFSNLYSTLPSSEKKEKDAPQKPAENKAKLPIVVVFDE 302
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALR 295
AHNIDNVCIEA+SV + TL+ A NL + + R + D +L EY RL E +
Sbjct: 303 AHNIDNVCIEAMSVEINDDTLDEAYANLDILAGHVARQREKDERQLLEEYRRLAERIVDS 362
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
++S P LP D++++A+PGNIRRAEHF+ LR +V YL+ L+ + EGP+ F
Sbjct: 363 SIDIEGYMS-PVLPDDVIQKAIPGNIRRAEHFISFLRTVVGYLKQYLKVQEPRSEGPLMF 421
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ GI TL++ Y R+ SL+ TL IT + IQ + DF TLVGTYT GF +I
Sbjct: 422 LHRFEQETGIAYSTLQYTYNRMKSLLNTLSITALGDLSSIQLVADFCTLVGTYTTGFIVI 481
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+EP+ + + +PV+Q SC DAS+A++PV + FQSV++TSGT+SP+++YP++LNF PV+
Sbjct: 482 VEPYPQG--SLYEPVIQFSCLDASIAMQPVVENFQSVILTSGTISPLEMYPKILNFTPVL 539
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
++S MSL RDC+CP+++ +G++QL +ST++++R+D V RNYG LL+E+ +PDG+VC
Sbjct: 540 TQSLPMSLDRDCLCPLIVAKGANQLQMSTRYELRNDVTVLRNYGTLLIELCKHIPDGVVC 599
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY+YM+ I++ W + GI+ IM+HKL+F+ET+DVV TT+AL NYRKACD GRGA+F
Sbjct: 600 FFPSYAYMELIVSHWYECGIIASIMEHKLIFMETKDVVTTTMALHNYRKACDVGRGALFL 659
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
S+ RGKVAEGIDFDRHYGR VI+ GVPFQYTLS++L ARL+++R + I E +FLTFDA+
Sbjct: 660 SICRGKVAEGIDFDRHYGRCVILIGVPFQYTLSRVLKARLDFMRTKYGIMENEFLTFDAM 719
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
RQAAQCVGR+IR+K+D+G+M+FAD RYSR DKRSKLP WIL +L +++L+T+ A+ A
Sbjct: 720 RQAAQCVGRIIRNKSDFGLMVFADSRYSRADKRSKLPPWILKNLEPGNMSLTTESAVTAA 779
Query: 716 REFLRKMAQPY 726
+ LR +AQ Y
Sbjct: 780 KVLLRNIAQDY 790
>gi|449016631|dbj|BAM80033.1| nucleotide excision repair protein XP-D [Cyanidioschyzon merolae
strain 10D]
Length = 746
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/758 (47%), Positives = 493/758 (65%), Gaps = 46/758 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MI +ED+ V FPY YPEQ YM LKRALDA GH ++EMP+GTGKT+++LSL +SY+
Sbjct: 1 MIVDIEDLAVNFPYREPYPEQLQYMRSLKRALDAGGHAVIEMPSGTGKTVSILSLASSYI 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P KL+YCTRTV EMEK LAE K L + G +++L +GL++R +LCV
Sbjct: 61 SRWPLVYRKLVYCTRTVEEMEKVLAEAKRLFATMQANRGDPSELLCVGLAARSHLCVLEE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAEN----------PNIETCEFFENYEKAASAA-V 169
L N V++ACR TASWVR A ++ P + C F+E + AAS +
Sbjct: 121 AL--HNPRGVESACRALTASWVRERAYQSTDHGHQVDIPPGL--CPFYERFSSAASQNFI 176
Query: 170 LPPGV-YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
LP G Y++ DLR FG + GWCPYFLAR MV FA++VVYSYQY+LDP+V+ ++S + +
Sbjct: 177 LPAGAAYSISDLREFGARVGWCPYFLARQMVPFAHIVVYSYQYILDPRVSRVVSSDFGPD 236
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
+++VFDEAHNIDNVC EA SV + Q L+ A RNL+ ++ + K RL EY RL
Sbjct: 237 TIIVFDEAHNIDNVCTEAFSVQLNDQLLQCAARNLNTLSSRVHEMKRRGVERLHQEYERL 296
Query: 289 VEGLA-------LRGNLPNAWLSNPALPSDILKEA------VPGNIR--------RAEHF 327
G++ LR ++ A L ALPS +++ A +P +R F
Sbjct: 297 AWGISTADRESQLR-DMQIAGLDPSALPSLVVESAPDASAMIPDQMRISLCPEIQSTVGF 355
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
L LR+++ Y++ +++ + +E ++ +++ L+ +RL SL+ LEI+
Sbjct: 356 LQFLRQILSYVQELVDSNLIMEETAQRMALAVCHRLSTERRALQLASDRLVSLLWALEIS 415
Query: 388 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFD 447
D F +Q + DF TL+GTY+ GF +I +P +ER+ H L+C DASLA++PV
Sbjct: 416 DVAAFSPLQKLSDFCTLLGTYSAGFVVINDP-EERIFH-------LACLDASLAMRPVLT 467
Query: 448 RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFD 507
RF+SVVITSGTLSP+ YPRLL F ++ SF MSL R C+CP+++TRG DQ P+S+++
Sbjct: 468 RFKSVVITSGTLSPLWFYPRLLTFRAAIAESFPMSLERACLCPLIVTRGVDQSPISSQYS 527
Query: 508 MRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFI 567
R + +ARNYG+LL+ M IVPDG+VCFF SY +M +I++ W +S IL+ + + KL F+
Sbjct: 528 TRKEISIARNYGELLLNMADIVPDGVVCFFPSYEFMHDIVSQWVESDILQRLQKLKLTFV 587
Query: 568 ETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
ETQD VE LA+ +YR ACD GRGAV SVARG+ AEGIDFD HYGR ++FGVPFQY+
Sbjct: 588 ETQDAVEAGLAIKHYRMACDAGRGAVLLSVARGRAAEGIDFDNHYGRCALLFGVPFQYSE 647
Query: 628 SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 687
S++L ARL YL+ +QI+E +FL FDA+RQAAQCVGRVIR+K DYG+MIFAD+RY+R
Sbjct: 648 SRLLKARLSYLQQRYQIREDEFLVFDAMRQAAQCVGRVIRNKQDYGIMIFADRRYARPAL 707
Query: 688 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
KLP WI L DA++ L A++ A FL +MAQP
Sbjct: 708 LQKLPRWIAQFLDDAYIGLDIGTAVNHAGHFLLQMAQP 745
>gi|350644408|emb|CCD60850.1| DNA repair helicase rad3/xp-d, putative [Schistosoma mansoni]
Length = 698
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/725 (46%), Positives = 482/725 (66%), Gaps = 52/725 (7%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M+ELKR +DAKGH +LEMP+GTGKT++LLSLI +Y+ ++P K IYC+RTV E+EK +
Sbjct: 1 MIELKRTIDAKGHGVLEMPSGTGKTVSLLSLIVAYMKARPGIVEKFIYCSRTVPELEKVI 60
Query: 85 AELKLLHNY-QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
ELK+L Y T +L I LSSRKNLC+ V A + +VD+AC + TAS+VR
Sbjct: 61 EELKVLDKYYATETNEKGCGLLGIVLSSRKNLCIQRDVKQAGDGAAVDSACFRLTASFVR 120
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+PN+ C+++E ++ LP G+Y + D++ + K+ +CPYFL R+ + +AN
Sbjct: 121 KKHMTDPNVPYCKYYEEFDLHGRDNPLPTGIYNMADIKTYAKKHNYCPYFLTRYAISYAN 180
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+VVYSY YLLDPK+A ++S+E+ K SVVVFDEAHNIDNVCIE++S + R++LE T +L
Sbjct: 181 IVVYSYFYLLDPKIANVVSRELPKNSVVVFDEAHNIDNVCIESMSCLITRRSLEKCTTSL 240
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+ + Q + K ++ RL+ EY RLVEGL A + L+NPALP DIL+E++PG++
Sbjct: 241 NLLTQTVNEAKTNNSERLKEEYQRLVEGLRQAKLSKETDLVLANPALPDDILQESIPGSL 300
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM 381
R A+ FL LRR ++Y++ RL +V E PV+F+ +D+K L+FC ERL SL+
Sbjct: 301 RSADSFLSFLRRFLEYVKLRLRIAHVVHETPVAFLRDCLEKVCVDRKPLQFCAERLRSLL 360
Query: 382 LTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
TLE+ D F + +C+FATLV TYTRGF +IIEPFDER P I +PVL C DASL
Sbjct: 361 HTLELADYANFSSLTLLCNFATLVSTYTRGFCLIIEPFDERKPTIINPVLYFHCMDASLP 420
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP 501
++P+ RF SV+ITSGTLSP+++YPR+L+FHPV + SF M+L R+C+ PM++++G+DQ+P
Sbjct: 421 IRPIMSRFTSVIITSGTLSPLEMYPRILDFHPVNTVSFTMTLARNCVLPMIVSKGNDQVP 480
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
++TKF+ R D V RNYG LL ++ ++VPDGIV FF SY Y++ A+W + I+++I +
Sbjct: 481 MTTKFESRQDVAVIRNYGHLLAQLSAVVPDGIVAFFPSYHYLESTFASWYEQHIVEQIQR 540
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
+KL+F+ETQD ET+LAL Y +
Sbjct: 541 NKLLFVETQDAEETSLALAAYHR------------------------------------- 563
Query: 622 PFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
ARL++LR+ + ++ +F+TFDA+R AAQC+GR IR K+DYG+MI ADKR
Sbjct: 564 -----------ARLDFLREQYNVRPNEFITFDAMRHAAQCLGRAIRGKSDYGIMILADKR 612
Query: 682 YSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQA 741
Y+R DKR KLPGWI S L+DA +NLS + ++ +R FLR M QP++K +G LL++
Sbjct: 613 YARADKRFKLPGWIQSQLQDAFINLSIEESIQASRRFLRLMGQPFNKNDQLGL-ALLTRE 671
Query: 742 DLEKM 746
+ K+
Sbjct: 672 HINKL 676
>gi|238883179|gb|EEQ46817.1| DNA repair helicase RAD3 [Candida albicans WO-1]
Length = 701
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/681 (48%), Positives = 461/681 (67%), Gaps = 8/681 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFFIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L ++ LG +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEFRANELGEVEDFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIET--CEFFENYEKAASAAVLPPGVYTLQ 178
+ VD CR+ T ++ + E C F E ++P GVY+
Sbjct: 120 ISKERKGVVVDEKCRRITNGQLKEKIEKGVPTEDSLCSFHEKLYDLEPHNLVPSGVYSFD 179
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L + K++G CPYF R M+ F N+++YSY YLLDPK+A +S+E+ K+S+V+FDEAHN
Sbjct: 180 ALIKYCKEEGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIAERVSRELSKDSIVIFDEAHN 239
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRG 296
IDNVCIE+LS+ + +TL+ A+R +++ + IE KA D+ +L+ EY +LVEGL A
Sbjct: 240 IDNVCIESLSLDLTDETLKKASRGANKLGEAIEDMKAQDSEKLQNEYEQLVEGLRQAEIA 299
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+++NP LP D+L EA+PGNIR+ EHF+ L+R ++YL+ R++ +V E P SF+
Sbjct: 300 RDQELFMANPVLPQDLLDEAIPGNIRKGEHFIAFLKRFIEYLKTRMKVLHVISETPTSFL 359
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
+ I++K LRFC ERL L+ TLE+T+ D+F ++ I FATLV TY GF +I+
Sbjct: 360 QHLKELTYIERKPLRFCSERLSLLVRTLEVTEIDDFNALKDIATFATLVSTYDSGFQLIL 419
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP++ +P+P+L +C DAS+A+KPVFDRF SV+ITSGT+SP+D+YP++L F V+
Sbjct: 420 EPYETEGSTVPNPILHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPKMLKFETVIQ 479
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
S+ M+L R PM++T+GSDQ+ +S++F++R+DP V RNYG LL+E I PDG+V F
Sbjct: 480 ESYAMTLARRSFLPMIVTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVF 539
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ II+ W G+L E+ +HKL+ +ET D ET+LAL+ YRKAC GRGAV S
Sbjct: 540 FPSYLYMESIISMWQSMGVLDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAVLLS 599
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE++RD FQIKE DFL+FDA
Sbjct: 600 VARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKENDFLSFDAHE 659
Query: 657 QAAQCVGRVI---RSKADYGM 674
+ G R DYG
Sbjct: 660 TCSAVFGESFERERRLWDYGF 680
>gi|322707662|gb|EFY99240.1| DNA repair helicase RAD3 [Metarhizium anisopliae ARSEF 23]
Length = 716
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/671 (48%), Positives = 457/671 (68%), Gaps = 5/671 (0%)
Query: 77 VHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK 136
+ E+EK L ELK L Y+T LG +GL+SRKNLC++ V ++ VDA CR
Sbjct: 1 MSEIEKALVELKALMKYRTEQLGYEEDFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRS 60
Query: 137 RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLAR 196
TA +V+ N+ C + +N + ++P GV+T + +G++ CPYF AR
Sbjct: 61 LTAGFVKEKKDRGENVAVCVYHDNLDLLEPHNLIPNGVWTFDGILRYGEEHKQCPYFTAR 120
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
M+Q+ NVV++SY YLLDPK+A +S++ K+ +VVFDEAHNIDNVCIEALS + +L
Sbjct: 121 RMMQYCNVVIFSYHYLLDPKIAERVSRDFSKDCIVVFDEAHNIDNVCIEALSTDITEDSL 180
Query: 257 EGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILK 314
A+R + +I + TD +L+ EY +LV+GL A +A+++NPALP D+L+
Sbjct: 181 RRASRGAQNLEHKITEMRDTDQEQLQNEYQKLVQGLREADEARQEDAFMANPALPEDLLR 240
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCY 374
EAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF+A + H I++K LRFC
Sbjct: 241 EAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCA 300
Query: 375 ERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLS 434
ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EPF+ +P+P+L +
Sbjct: 301 ERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESDTAEVPNPILHFT 360
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C DA++A++PVF+RF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++T
Sbjct: 361 CLDAAIAIRPVFERFYSVIITSGTISPLEMYPKMLDFSTVIQESYSMTLARRSFLPMIVT 420
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG 554
RGSDQ +ST F +R++P V RNYG LL+E I PDG+V FF SY YM+ II+ W G
Sbjct: 421 RGSDQASISTSFQVRNEPSVVRNYGTLLIEFAKITPDGLVVFFPSYLYMESIISMWQGMG 480
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
IL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VARGKV+EGIDFD YGR
Sbjct: 481 ILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGR 540
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
V+ GVPFQYT S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+
Sbjct: 541 TVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGI 600
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGR 734
M+ AD+R+ + KR +LP WI L D NLSTDMA+ AR FLR MAQP+ G
Sbjct: 601 MVLADRRFQK--KRVQLPKWINQGLLDVDTNLSTDMAVSSARRFLRTMAQPFHAKDQDGI 658
Query: 735 KTLLSQADLEK 745
T DL+K
Sbjct: 659 ST-WGYEDLQK 668
>gi|322692960|gb|EFY84841.1| DNA repair helicase RAD3 [Metarhizium acridum CQMa 102]
Length = 716
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/671 (48%), Positives = 456/671 (67%), Gaps = 5/671 (0%)
Query: 77 VHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK 136
+ E+EK L ELK L Y+T LG +GL+SRKNLC++ V ++ VDA CR
Sbjct: 1 MSEIEKALVELKALMKYRTEQLGFEEDFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRS 60
Query: 137 RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLAR 196
TA +V+ N++ C + +N + ++P GV+T + G++ CPYF AR
Sbjct: 61 LTAGFVKEKKDRGENVDVCIYHDNLDLLEPHNLIPNGVWTFDGILRHGEEHKQCPYFTAR 120
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
M+Q+ NVV++SY YLLDPK+A +S++ K+ +VVFDEAHNIDNVCIEALS + +L
Sbjct: 121 RMMQYCNVVIFSYHYLLDPKIAERVSRDFSKDCIVVFDEAHNIDNVCIEALSTDITEDSL 180
Query: 257 EGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILK 314
A+R + +I + TD +L+ EY +LV+GL A +A+++NP LP D+L+
Sbjct: 181 RRASRGAQNLEHKITEMRDTDQEQLQNEYQKLVQGLREADEARQEDAFMANPTLPEDLLR 240
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCY 374
EAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF+A + H I++K LRFC
Sbjct: 241 EAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCA 300
Query: 375 ERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLS 434
ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I EPF+ +P+P+L +
Sbjct: 301 ERLTSLVRTLELTNVEDYQPLQEVATFATLVATYEKGFLLIFEPFESDTAEVPNPILHFT 360
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C DA++A++PVF+RF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++T
Sbjct: 361 CLDAAIAIRPVFERFYSVIITSGTISPLEMYPKMLDFSTVIQESYSMTLARRSFLPMIVT 420
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG 554
RGSDQ +ST F +R++P V RNYG LL+E I PDG+V FF SY YM+ II+ W G
Sbjct: 421 RGSDQASISTSFQVRNEPSVVRNYGTLLIEFAKITPDGLVVFFPSYLYMESIISMWQGMG 480
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
IL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VARGKV+EGIDFD YGR
Sbjct: 481 ILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGR 540
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
V+ GVPFQYT S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+
Sbjct: 541 TVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGI 600
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGR 734
M+ AD+R+ + KR++LP WI L D NLSTDMA+ AR FLR MAQP+ G
Sbjct: 601 MVLADRRFQK--KRAQLPKWINQGLLDVDTNLSTDMAVSSARRFLRTMAQPFHAKDQDGI 658
Query: 735 KTLLSQADLEK 745
T DL+K
Sbjct: 659 ST-WGYEDLQK 668
>gi|452822467|gb|EME29486.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 747
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/742 (47%), Positives = 494/742 (66%), Gaps = 20/742 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F+L+ + VYFPY ++YPEQ SYM +LK+ALDAKGH +LEMP+GTGKTI LLSL+TSY+
Sbjct: 1 MKFQLDGLNVYFPYAHVYPEQLSYMNQLKKALDAKGHAVLEMPSGTGKTITLLSLLTSYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLL-HNYQTRHLGPAAKILAIGLSSRKNLCVNS 119
L + K+IYCTRTV EMEK + E +L H Q L IGL+SRK+LC+N
Sbjct: 61 LQTQPSVRKIIYCTRTVEEMEKVMEEANILYHCLQQEKEVVDGWFLCIGLASRKHLCLNE 120
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY---EKAASAAVLPPGVYT 176
+V++ VD CR TASW+R A +P I C + +K ++P GVY+
Sbjct: 121 QVVSCGEGFLVDGRCRSLTASWIREKAKNDPTIPKCNYMMTLWCNQKQVDEMIIPCGVYS 180
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPK----VAGIISKEMQKESVVV 232
LQDLR +G+Q G CPYF +R ++ FAN++VYSY YLLDPK V+ ++S+E+ ++++VV
Sbjct: 181 LQDLRRWGEQNGCCPYFYSRRLLAFANLIVYSYHYLLDPKYRVEVSQLVSRELPQDAIVV 240
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
FDEAHNIDNVCIEALSV V R T++ A ++ + K L+ EY L G
Sbjct: 241 FDEAHNIDNVCIEALSVWVNRNTIDDANNAAMQLAHRVVHAKGQSLAMLQQEYQNLTRGQ 300
Query: 293 ALRGNLPNAWLS------NPALPS-----DILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
+ L ++ LS A PS L+E VP +IR+AEHF+ L+ L+ Y++
Sbjct: 301 TIHHGLTSSTLSVNWSEWEMAQPSIHDVHQTLEETVPPSIRKAEHFIAYLQSLIAYIKNL 360
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF 401
L + F+ + ++ K+ RF +RL SL+ TLEI D F + ++ +
Sbjct: 361 LNRPEALEMTHNQFLQDFSKECPVEVKSFRFTSDRLSSLLRTLEIGDWSRFRSLASVAEM 420
Query: 402 ATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSP 461
T+ TY+ GF+II+EPF+ + HI PVLQL+C DASLA+ PV +F++V+ITSGTLSP
Sbjct: 421 ITIASTYSSGFAIILEPFETKT-HIWSPVLQLACLDASLAMMPVTRKFRNVIITSGTLSP 479
Query: 462 IDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKL 521
+D YPR+LNF ++ SF MSL R C+ P+++ G +++ +++KF+ R + V ++YG++
Sbjct: 480 LDFYPRMLNFRAAITASFNMSLNRRCVLPLIIGMGENRVLLTSKFNQRGELQVPKSYGRI 539
Query: 522 LVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN 581
L+E+ +VPDGIV FF SY YM+ + W ++ +L E+ KL+FIET D E++LAL N
Sbjct: 540 LIEISKLVPDGIVGFFPSYEYMELALDVWKENNVLDELQAMKLLFIETSDGAESSLALRN 599
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT 641
+R ACD GRGA+F SVARGK AEGIDFD HYGR V++FG+PFQYT S+ L ARL YLR+
Sbjct: 600 FRTACDIGRGAIFLSVARGKAAEGIDFDHHYGRCVLLFGMPFQYTESRELKARLRYLRER 659
Query: 642 FQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
FQI E DFL FDA+RQAAQC GRVIR+K+DYG+M+FAD+RY+R+DK +KLP WIL L +
Sbjct: 660 FQIMENDFLVFDAMRQAAQCAGRVIRNKSDYGIMVFADRRYARYDKLTKLPRWILQFLSE 719
Query: 702 AHLNLSTDMALHIAREFLRKMA 723
+ + D AL ++FL +MA
Sbjct: 720 DQIYIDIDTALTKIKQFLLEMA 741
>gi|296423910|ref|XP_002841495.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637735|emb|CAZ85686.1| unnamed protein product [Tuber melanosporum]
Length = 748
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/753 (45%), Positives = 482/753 (64%), Gaps = 70/753 (9%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M FK++++ V FPY IYP ++ YM +LKR LDA GHC+LEMP+GTGKT++LLSLI +Y
Sbjct: 43 MRFKIDELEVLFPYPRIYPGEWRYMTDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ 102
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
S PE P KLIYC+RT+ E+EK LAELK L Y+++ LG
Sbjct: 103 QSFPE-PRKLIYCSRTMSEIEKALAELKALMAYRSKELG--------------------- 140
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
E R S+ TA +V+ A +E C F +N + ++ PGVYTL +
Sbjct: 141 -YVEEFRGSL-------TAGFVKEKKARGEEVEVCVFHDNLDTLEPHNLITPGVYTLDGM 192
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+G++ CPYF AR M+ F NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNID
Sbjct: 193 LKYGEKHTQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 252
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCIE+LS+ + +L A R + ++I KA+DA +L+ EY +LVEGL G
Sbjct: 253 NVCIESLSIDLTDDSLRRAARGAQNLEKKINEMKASDAEKLQNEYKKLVEGLRDVDEGTE 312
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+++++NP LP D+LKEA+PGNIRRAEHFL L+R V+YL+ R++ +V E P SF+
Sbjct: 313 EDSFMANPVLPKDLLKEAIPGNIRRAEHFLAFLKRFVEYLKTRMKVLHVISETPASFLQH 372
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K LRFC ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EP
Sbjct: 373 LKDLTFIEKKPLRFCAERLTSLVRTLELANIEDYKSLQEVAMFATLVATYEKGFLLILEP 432
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
F+ +P+P+L +C DAS+A++PVF+RF SVVITSGT+SP+++YP++L F+ VV S
Sbjct: 433 FESETATVPNPILHFTCLDASIAIRPVFERFSSVVITSGTISPLEMYPKMLQFNTVVQES 492
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ M+L R PM++TRGSDQ+ VST+F++R+DP V RNYG LLVE I PDG+V FF
Sbjct: 493 YSMTLARRSFLPMIVTRGSDQVAVSTRFEIRNDPSVVRNYGSLLVEFSKITPDGMVVFFP 552
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ +++
Sbjct: 553 SYLYMESIISMWQGMGILDEVWKYKLILVETPDSQETSLALETYRTACCNGRGAISTTIS 612
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
+ + F P + DFL+FDA+R A
Sbjct: 613 ----------------VELCFESP-------------------SNTPKNDFLSFDAMRHA 637
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
AQC+GRV+R K DYG+M+ AD+R+ + KRS+LP WI L ++ +NLSTDMA+ IA++F
Sbjct: 638 AQCLGRVLRGKDDYGIMVLADRRFGK--KRSQLPKWINQALLESDVNLSTDMAVAIAKKF 695
Query: 719 LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGS 751
LR MAQP+ G T S ADLE+ GS
Sbjct: 696 LRTMAQPFAPKDQEGIST-WSLADLEEHQGKGS 727
>gi|303389494|ref|XP_003072979.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302123|gb|ADM11619.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 743
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/767 (45%), Positives = 505/767 (65%), Gaps = 52/767 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++++V VYFPYD++YPEQ YM E+KR+LD GHCL+EMP+GTGKT+ALLS+ SY
Sbjct: 1 MKIQIDEVLVYFPYDSVYPEQLKYMREVKRSLDNNGHCLIEMPSGTGKTVALLSMTISYQ 60
Query: 61 L---SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
L SK N K+IYC+RTV E+EK L EL + Y +H + L +GL+SRKNLC+
Sbjct: 61 LYMKSKNTN-FKIIYCSRTVSEVEKALKELDGVVGYIKKH--RPFEFLGLGLTSRKNLCL 117
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
N L + N VD +CR+ V L+ C+FFEN S +P VY
Sbjct: 118 NKAALKSFN---VDVSCRR----LVNRLSESR-----CDFFENLN---SFHEVPVAVYDF 162
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
L+ G+++G CPY+L R + + ++Y Y YL+DP++ I+SKE+ SVV+FDEAH
Sbjct: 163 SQLKEIGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRIYTIVSKELGPNSVVIFDEAH 222
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA--LR 295
NID+ CIE +S+ ++R LEGA+R + + + + + K + AG+ A+Y ++ E L +
Sbjct: 223 NIDSHCIEVMSIEIKRNILEGASRAIRNL-ENLLKEKGSAAGKESAQYEQMKEKLVEPVI 281
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
++P + + E +PGN+R + HF+ L+R+ ++ + +L+T ++ E SF
Sbjct: 282 DSIPYFYATGEGN-----YEFIPGNLRNSFHFVSALKRIAEFFKTKLKTTHLTTESTESF 336
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
SI + +++K LRFC +RL L +L I D D H++T+ DF+T+V Y++GF +I
Sbjct: 337 CKSIKELSFVEKKALRFCSQRLGMLSQSLGIDDED-MGHLKTVADFSTMVSMYSKGFVVI 395
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
EPFD + P + +P L+L+C D+S+A+ VF RF++V+ITSGT+SPID+YP++LNF P
Sbjct: 396 FEPFDSQAPTVFNPTLRLACLDSSIAMSSVFRRFRNVIITSGTMSPIDMYPKILNFVPSR 455
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQL------------------PVSTKFDMRSDPGVARN 517
+L R+ I P+++T+G+DQ+ ++T F +RSDP V RN
Sbjct: 456 IAEIGATLDRNSISPLIITKGNDQMTLRALSEDVEAVDTHKNDSLTTSFSLRSDPSVVRN 515
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTL 577
YG L+VE+ +VPDGIVCFF SY YM+EI++ W ++ I+ EI ++KLVF+ET D ET +
Sbjct: 516 YGHLMVELSKVVPDGIVCFFPSYMYMEEIVSLWAETNIISEISKNKLVFVETPDGRETEM 575
Query: 578 ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
AL NY++AC+ GRG + FSVARGKV+EG+DF+ YGR V+M GVPFQYT S L RL++
Sbjct: 576 ALANYKRACNNGRGGMLFSVARGKVSEGVDFEDGYGRCVVMLGVPFQYTESVRLKKRLDF 635
Query: 638 LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
LR+ + IKE DFLTFDA+R AAQC+GRV+R+K+DYG+MI AD+R+ R+DK+SKLP WI S
Sbjct: 636 LREEYGIKEYDFLTFDAMRHAAQCLGRVLRNKSDYGLMILADERFERNDKKSKLPKWIQS 695
Query: 698 HLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
+ + NLS DMAL IAR F R+MAQ G+ +LL + D+E
Sbjct: 696 CIDGGNCNLSVDMALSIARRFFREMAQECIGTGN----SLLGEKDIE 738
>gi|346319590|gb|EGX89191.1| DNA repair helicase RAD3 [Cordyceps militaris CM01]
Length = 709
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/671 (48%), Positives = 454/671 (67%), Gaps = 13/671 (1%)
Query: 77 VHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK 136
+ E+EK L EL+ L Y+T LG +GL+SRKNLC++ V ++ VDA CR
Sbjct: 1 MSEIEKALMELEALMKYRTEQLGYEEDFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRS 60
Query: 137 RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLAR 196
TA +V+ + N + S ++P GV+T + +G++ CPYF AR
Sbjct: 61 LTAGFVKEKKERGED--------NLDLLESHNLIPNGVWTFDGILRYGEENKQCPYFTAR 112
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
M+Q+ NVV++SY YLLDPK+A +SK+ K+ +VVFDEAHNIDNVCIE+LS + ++L
Sbjct: 113 RMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEESL 172
Query: 257 EGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILK 314
ATR + Q+I + TD +L+ EY +LV+GL A +A+++NP LP ++LK
Sbjct: 173 RRATRGAQNLKQKIADMRETDQEQLQNEYEKLVQGLREADEARQEDAFMANPVLPEELLK 232
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCY 374
EAVPGNIRRAEHF+ L+R ++YL+ R++ V E P SF+A + H I++K L FC
Sbjct: 233 EAVPGNIRRAEHFVSFLQRFIEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLGFCA 292
Query: 375 ERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLS 434
ERL SL+ TLE+T+ +++ +Q + FATLV TY +GF +I+EP++ +P+P+L +
Sbjct: 293 ERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPYESDTAEVPNPILHFT 352
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C DA++A++P+FDRF SV+ITSGT+SP+++YP++L+F V+ S+ M+L R PM++T
Sbjct: 353 CLDAAIAIRPIFDRFYSVIITSGTISPLEMYPKMLDFSTVIQESYSMTLARRSFLPMIVT 412
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG 554
RGSDQ +ST F +R++P V RNYG LL E I PDG+V FF SY YM+ II+ W G
Sbjct: 413 RGSDQASISTSFQVRNEPSVVRNYGNLLTEFAKITPDGLVVFFPSYLYMESIISMWQGMG 472
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
IL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VARGKV+EGIDFD YGR
Sbjct: 473 ILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGR 532
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
V+ GVPFQYT S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+GRV+R K DYG+
Sbjct: 533 TVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGI 592
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGR 734
M+ AD+R+ + KR +LP WI L D +NLSTDMA+ AR FL+ MAQP+ G
Sbjct: 593 MVLADRRFQK--KRPQLPKWINQGLMDVDVNLSTDMAVSSARRFLKTMAQPFRAKEQEGI 650
Query: 735 KTLLSQADLEK 745
T DLE+
Sbjct: 651 ST-WGYEDLER 660
>gi|281204292|gb|EFA78488.1| transcription factor IIH component [Polysphondylium pallidum PN500]
Length = 694
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/541 (58%), Positives = 414/541 (76%), Gaps = 4/541 (0%)
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
+++SYQY+LDPK++ ++S + S+VVFDEAHNIDNVCI ALS+++ QT+E AT+NL+
Sbjct: 112 LIFSYQYMLDPKISSLVSSQFASNSIVVFDEAHNIDNVCINALSINIDNQTIENATKNLT 171
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+IN IE K DA RL+ EY +LV+GLA G+ +A +P LP++++ E VPGNIR+A
Sbjct: 172 KINNGIENLKKVDAERLKNEYVKLVQGLARSGDTMSA---DPLLPNEVINEVVPGNIRKA 228
Query: 325 EHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL 384
EHF+ VLRR + YLR RL T+ V E P+SF+ S++ I KTLRFC RL SL+ TL
Sbjct: 229 EHFVSVLRRFIDYLRSRLRTQMVVSESPLSFLRSLSQLTTISAKTLRFCSSRLSSLLRTL 288
Query: 385 EITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP 444
+I+D ++F I I DFATLVGTY GF IIIEP+D++ P+ DP+ Q C DAS+ +KP
Sbjct: 289 QISDLNQFSSISVIADFATLVGTYGNGFIIIIEPYDQKTPNQYDPIFQFCCLDASIGMKP 348
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVST 504
+FD+++SV+ITSGTLSPID+Y ++LNF P + MSL R CICP +LTRGSDQ+ VST
Sbjct: 349 IFDKYKSVIITSGTLSPIDIYQKILNFRPSLVEQLSMSLHRSCICPCILTRGSDQISVST 408
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
KFD+R+D V RNYG LLVEM +IVPDGI+CFF SYSYM++I++ WN+ G+L I+ +KL
Sbjct: 409 KFDVRADTAVIRNYGALLVEMSAIVPDGIICFFTSYSYMEQIVSVWNEMGLLNNILNNKL 468
Query: 565 VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
+F+ET D E+ LAL NY+KACD GRGAV SVARGKV+EGIDFD YGR VI++G+P+
Sbjct: 469 IFVETSDAAESALALQNYKKACDSGRGAVLLSVARGKVSEGIDFDNQYGRCVILYGIPYI 528
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 684
T S++L ARLEY RD +QIKE +FLTFDA+R A+QCVGRVIR K+DYG+MIFADKRY+R
Sbjct: 529 NTESRVLRARLEYQRDKYQIKENEFLTFDAMRTASQCVGRVIRGKSDYGIMIFADKRYNR 588
Query: 685 HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
DKR+KLP WIL + HLNLSTDMA+ ++R FL+ MAQPY + +G K+L + +LE
Sbjct: 589 LDKRNKLPQWILQFCQPQHLNLSTDMAVALSRAFLKDMAQPYSREEQLG-KSLWNLQNLE 647
Query: 745 K 745
K
Sbjct: 648 K 648
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M FK++++ VYFPY IYPEQY+YM+ LK+ALDA G C+LEMP+GTGKT++LLSLI+SY
Sbjct: 1 MKFKIDELDVYFPYAYIYPEQYNYMVALKKALDAGGPCMLEMPSGTGKTVSLLSLISSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA-KILAIGLSSR 112
+ P KLIYC+RTV E+E+ + E + + Y+ LG +A K LA+ ++SR
Sbjct: 61 VVHPT--AKLIYCSRTVPEIEQAMEEARRVLTYRNAELGESAPKTLALAMTSR 111
>gi|401826548|ref|XP_003887367.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
gi|395459885|gb|AFM98386.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
Length = 742
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/768 (45%), Positives = 504/768 (65%), Gaps = 55/768 (7%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++++V VYFPYD++YPEQ YM E+KR+LD KGHCL+EMP+GTGKT+ALLS+ SY
Sbjct: 1 MKIQIDEVLVYFPYDSVYPEQLKYMREIKRSLDNKGHCLIEMPSGTGKTVALLSMTISYQ 60
Query: 61 L-SKPENP-VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
L K +N K++YC+RTV E+EK L EL + Y +H + L +GL+ RKNLC+N
Sbjct: 61 LYMKAKNAHFKIVYCSRTVQEVEKALKELDRVVEYIKKH--RPIEFLGLGLTGRKNLCIN 118
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
AA +VD ACR+ V + C+F+EN S +P VY
Sbjct: 119 E---AASKSFNVDVACRRLINRLVES---------KCDFYENLN---SFNEVPVAVYDFS 163
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L+ G+++G CPY+L R + + ++Y Y YL+DP++ I+SKE+ +SVV+FDEAHN
Sbjct: 164 QLKEMGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRIYAIVSKELGPDSVVIFDEAHN 223
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVE--GLALRG 296
ID+ CIE LS+ ++R LEGATR + N E + AG Y ++ E G +
Sbjct: 224 IDSHCIEVLSIEIKRNILEGATRAIK--NLECLLKQRGPAGEESMLYEKMKEKVGEPVAD 281
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
++P + + E +PGN+R + HF+ L+R+ ++ + +L+T ++ E SF
Sbjct: 282 SIPYFYATGEGN-----YEFIPGNLRNSFHFISALKRITEFFKTKLKTTHLTTESTESFC 336
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
SI + +++K LRFC +RL L +L + D D H++T+ DF+T+V Y++GF +I
Sbjct: 337 KSIKELSFVEKKALRFCSQRLGMLSQSLGVDDED-MGHLKTVADFSTMVSMYSKGFVVIF 395
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPFD + + +P L+L+C D+S+A+ VF RF++V+ITSGT+SPID+YP++LNF V S
Sbjct: 396 EPFDSQASTVFNPTLRLACLDSSIAMSSVFGRFRNVIITSGTMSPIDMYPKILNF--VSS 453
Query: 477 RSFKM--SLTRDCICPMVLTRGSDQLPV------------------STKFDMRSDPGVAR 516
R+ ++ +L R+ I P+++T+G+DQ+ + +T F +RSDP V R
Sbjct: 454 RTVEIGATLDRNSISPLIITKGNDQMTLRALSDDVEATDTSNGDVLTTSFSLRSDPSVVR 513
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
NYG L+VE+ +VPDGIVCFF SY YM+EI++ W ++ I+ EI ++KLVF+ET D ET
Sbjct: 514 NYGHLMVELSKVVPDGIVCFFPSYMYMEEIVSLWAETNIINEISKNKLVFVETPDGRETE 573
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
+AL NY++ACD GRG + FSVARGKV+EG+DF+ YGR V+M GVPFQYT S L RL+
Sbjct: 574 IALSNYKRACDNGRGGMLFSVARGKVSEGVDFEDGYGRCVVMLGVPFQYTESVRLKKRLD 633
Query: 637 YLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIL 696
+LR+ + IKE DFLTFDA+R AAQC+GRV+R+K DYG+MI AD+R+ R+DK+SKLP WI
Sbjct: 634 FLREEYGIKEYDFLTFDAMRHAAQCLGRVLRNKNDYGLMILADERFERNDKKSKLPKWIQ 693
Query: 697 SHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
+ + + NLS DMAL IAR F R+MAQ AG+ +LLS+ D+E
Sbjct: 694 NCIDGGNCNLSVDMALSIARRFFREMAQECTGAGN----SLLSEKDVE 737
>gi|169612700|ref|XP_001799767.1| hypothetical protein SNOG_09475 [Phaeosphaeria nodorum SN15]
gi|160702563|gb|EAT82740.2| hypothetical protein SNOG_09475 [Phaeosphaeria nodorum SN15]
Length = 724
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/662 (48%), Positives = 459/662 (69%), Gaps = 4/662 (0%)
Query: 77 VHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK 136
+ E+EK LAELK L Y+T+ LG + +GL+SRKNLC++ V ++ VD+ CR
Sbjct: 1 MSEIEKALAELKNLMKYRTKELGYEEEFRGLGLTSRKNLCLHPTVKREKSGTVVDSKCRS 60
Query: 137 RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLAR 196
TA +V+ +++ C + +N + ++PPGV+T L +G++ CPYF AR
Sbjct: 61 LTAGFVKEKKERGEDVDLCVYHDNLDLLEPHNLVPPGVFTFDGLLKYGEKHKQCPYFSAR 120
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
M+ + NV++YSY YLLDPK+A +SKE+ K+ +VVFDEAHNIDNVCIE+LS+ + +L
Sbjct: 121 RMMAYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSL 180
Query: 257 EGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILK 314
AT+ ++ ++++I K TDA +L++EY +LVEGL A + +++NPALP D+L
Sbjct: 181 RKATKGVNNLDRKITEMKTTDAEKLQSEYAKLVEGLRTADEARQEDTFMANPALPDDLLT 240
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCY 374
EAVPGNIRRAEHF+ L+R ++YL+ R++ +V E P SF+ + I++K LRFC
Sbjct: 241 EAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHVISETPPSFLQHLRDLTFIEKKPLRFCA 300
Query: 375 ERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLS 434
ERL SL+ TLE+T+ +++ +Q I FATLV TY GF +I+EPF+ +P+PVL +
Sbjct: 301 ERLTSLVRTLELTNIEDYQPLQDIATFATLVATYETGFLLILEPFESATATVPNPVLHFT 360
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C DA++A+KPVF+RF SV++TSGT+SP+D+YPR+LNF+ VV SF M+LTR PM++
Sbjct: 361 CLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKTFLPMIVD 420
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG 554
RG+DQ ++++F+ R+D V RN+G LL+E + PDG+V FF SY YM+ II+ W
Sbjct: 421 RGNDQNQITSQFEHRNDLQVQRNFGTLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGME 480
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
IL + ++KL+ +ET D ET LAL+ +R AC+ GRGAV VARGKV+EGIDFD HYGR
Sbjct: 481 ILDTVWKYKLILVETPDAQETALALETFRTACNNGRGAVLLCVARGKVSEGIDFDHHYGR 540
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
V+ GVP+QYT S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+GRVIR K DYG+
Sbjct: 541 TVLCMGVPYQYTESRILKARLEFLRETYRIKESDFLSFDAMRHAAQCLGRVIRGKDDYGI 600
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGR 734
M+ ADKR+++ K ++LP WI L LS D A+ A+ FL+ M++P+ + G
Sbjct: 601 MVLADKRFNK--KVTQLPKWIQQGLEAKSTKLSIDQAVGNAKAFLKDMSKPWSRKEGEGH 658
Query: 735 KT 736
+
Sbjct: 659 SS 660
>gi|396081490|gb|AFN83106.1| Rad3/XPD DNA repair helicase [Encephalitozoon romaleae SJ-2008]
Length = 743
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/769 (44%), Positives = 500/769 (65%), Gaps = 50/769 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++++V VYFPYD++YPEQ YM E+KR+LD +GHCLLEMP+GTGKT+ALLS+ SY
Sbjct: 1 MKIQIDEVLVYFPYDSVYPEQLKYMREIKRSLDNRGHCLLEMPSGTGKTVALLSMTISYQ 60
Query: 61 LS-KPENP-VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
L K +N K++YC+RTV E+EK L EL + +Y +H + L +GL+ RKNLC+N
Sbjct: 61 LHMKAKNDHFKIVYCSRTVPEVEKALRELDGVVSYIKKH--RPIEFLGLGLTGRKNLCIN 118
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
+ N VD ACR+ V L C+F+EN +P VY
Sbjct: 119 KVAFKSFN---VDVACRR----LVNRLGESR-----CDFYENLNNFNE---VPVAVYDFS 163
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L+ G+++G CPY+L R + + ++Y Y YL+DP++ I+SKE+ SVV+FDEAHN
Sbjct: 164 RLKEIGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRIYSIVSKELGPNSVVIFDEAHN 223
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRG 296
ID+ CIE LS+ ++R LEGATR + + + + R K G A+Y ++ E + +
Sbjct: 224 IDSHCIEVLSIEIKRNILEGATRAIKNL-ENLLRQKGPTTGEESAQYEKMKEKIREPVAD 282
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
++P + + E +PGN+R + HF+ L+R+ ++ + +L+T ++ E SF
Sbjct: 283 SIPYFYATGEGS-----YEFIPGNLRNSYHFISALKRITEFFKTKLKTTHLTTESTESFC 337
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
SI + I +K LRFC +RL L +L + D D H++T+ DF+T+V Y++GF +I
Sbjct: 338 KSIKELSFIGKKALRFCSQRLGMLSQSLGLDDED-MTHLKTVADFSTMVSMYSKGFVVIF 396
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPFD + + +P L+L+C D+S+A+ VF RF++V+ITSGT+SPID+YP++LNF P +
Sbjct: 397 EPFDSQASTVFNPTLRLACLDSSIAMSSVFARFRNVIITSGTMSPIDMYPKILNFVPSRT 456
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPV------------------STKFDMRSDPGVARNY 518
+L R+ I P+++T+G+DQ+ + +T F +RSDP V RNY
Sbjct: 457 AEIGATLERNSISPLIITKGNDQMTLRALSEDIETTDKCNSDMLTTSFSLRSDPSVVRNY 516
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G L++E+ +VPDGIVCFF SY YM+EI++ W ++ I+ EI ++KLVF+ET D ET +A
Sbjct: 517 GHLMIELSRVVPDGIVCFFPSYMYMEEIVSLWAETNIINEINKNKLVFVETPDGRETEMA 576
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L NYR+ACD GRG + FSVARGKV+EG+DF+ YGR V+M GVPFQYT S L RL++L
Sbjct: 577 LSNYRRACDNGRGGMLFSVARGKVSEGVDFEDGYGRCVVMLGVPFQYTESVRLRKRLDFL 636
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
R+ + IKE DFLTFDA+R AAQC+GRV+R+K DYG+MI AD+R+ R+DK+ KLP WI +
Sbjct: 637 REEYGIKEYDFLTFDAMRHAAQCLGRVLRNKNDYGLMILADERFERNDKKGKLPKWIQNC 696
Query: 699 LRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMT 747
+ + NLS DMAL IAR F R+MAQ AG+ +LLS+ D+E +
Sbjct: 697 IDGGNCNLSVDMALSIARRFFREMAQECIGAGN----SLLSEKDIEAFS 741
>gi|83405926|gb|AAI10523.1| ERCC2 protein [Homo sapiens]
Length = 682
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/529 (58%), Positives = 411/529 (77%), Gaps = 2/529 (0%)
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+
Sbjct: 124 ANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQG 183
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPG 319
NL + + + R K TD RLR EY RLVEGL A +A L+NP LP+++L+EAVPG
Sbjct: 184 NLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPNEVLQEAVPG 243
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
+IR AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL S
Sbjct: 244 SIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRS 303
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L+ TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DAS
Sbjct: 304 LLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDAS 363
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
LA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ
Sbjct: 364 LAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQ 423
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I
Sbjct: 424 VAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENI 483
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMF
Sbjct: 484 QRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMF 543
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FAD
Sbjct: 544 GVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFAD 603
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
KR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 604 KRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 652
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAA 124
+L A
Sbjct: 121 ILHA 124
>gi|397493361|ref|XP_003817576.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Pan paniscus]
Length = 682
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/529 (58%), Positives = 410/529 (77%), Gaps = 2/529 (0%)
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+
Sbjct: 124 ANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQG 183
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPG 319
NL + + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG
Sbjct: 184 NLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPG 243
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
+IR AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL S
Sbjct: 244 SIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRS 303
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L+ TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DAS
Sbjct: 304 LLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDAS 363
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
LA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ
Sbjct: 364 LAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQ 423
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I
Sbjct: 424 VAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENI 483
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMF
Sbjct: 484 QRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMF 543
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FAD
Sbjct: 544 GVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFAD 603
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
KR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 604 KRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 652
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAA 124
+L A
Sbjct: 121 ILHA 124
>gi|403299023|ref|XP_003940292.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Saimiri boliviensis boliviensis]
Length = 704
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/529 (58%), Positives = 410/529 (77%), Gaps = 2/529 (0%)
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+
Sbjct: 146 ANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQG 205
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPG 319
NL + + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG
Sbjct: 206 NLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPG 265
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
+IR AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL S
Sbjct: 266 SIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRS 325
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L+ TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DAS
Sbjct: 326 LLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDAS 385
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
LA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ
Sbjct: 386 LAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQ 445
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I
Sbjct: 446 VAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENI 505
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMF
Sbjct: 506 QRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMF 565
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FAD
Sbjct: 566 GVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFAD 625
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
KR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 626 KRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 674
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y +
Sbjct: 25 LNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRA 84
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++ +L
Sbjct: 85 YPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEIL 144
Query: 123 AA 124
A
Sbjct: 145 HA 146
>gi|19074270|ref|NP_585776.1| DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY [Encephalitozoon
cuniculi GB-M1]
gi|19068912|emb|CAD25380.1| DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY [Encephalitozoon
cuniculi GB-M1]
Length = 742
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/766 (45%), Positives = 497/766 (64%), Gaps = 51/766 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +++V VYFPY ++YPEQ YM E+KR+LD KGHCL+EMP+GTGKT+ALLS+ SY
Sbjct: 1 MKIHIDEVLVYFPYSSVYPEQLKYMREVKRSLDNKGHCLIEMPSGTGKTVALLSMTISYQ 60
Query: 61 LSKPENPV--KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
L V K++YC+RTV E+EK L EL + Y +H + L +GL+ RKNLC+N
Sbjct: 61 LHMKSKNVHFKVVYCSRTVPEVEKALKELDRVVEYIKKHR--PIEFLGLGLTGRKNLCIN 118
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
L + N VD ACR+ V LA C+F+EN A +P VY
Sbjct: 119 KAALKSFN---VDVACRR----LVNKLAESK-----CDFYENL---ADFREVPVAVYDFL 163
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L+ G+++G CPY+L R + + ++Y Y YL+DP++ I+S E+ SVV+FDEAHN
Sbjct: 164 QLKEMGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRICAIVSSELGPNSVVIFDEAHN 223
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA--LRG 296
ID+ CIE LS+ +RR LEGA+R + + ++R K A + +Y ++ E L +
Sbjct: 224 IDSHCIEVLSIEIRRNVLEGASRAIGNLENLLKRGKP--ASGVDIQYEKVREKLVGPVPE 281
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
++P + S E +PGN+R + HF+ L+R+ ++ + +L+T ++ E SF
Sbjct: 282 SIPYYYASGEGN-----YEFLPGNLRNSFHFVSALKRITEFFKTKLKTTHLTTESTESFC 336
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
SI + +++K LRFC +RL L +L + D D H++T+ DF+T+V Y++GF +I
Sbjct: 337 KSIRELSFVEKKALRFCSQRLGMLSQSLGLDDED-MGHLKTVADFSTMVSMYSKGFVVIF 395
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPFD + + +P L+L+C D+S+A+ PVF RF++V+ITSGT+SPID+YP++LNF P
Sbjct: 396 EPFDSQASTVFNPTLRLACLDSSIAISPVFARFRNVIITSGTMSPIDMYPKILNFVPSRI 455
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPV------------------STKFDMRSDPGVARNY 518
+L R+ I P+++T+G+DQ+ + +T F +RSDP V RNY
Sbjct: 456 AEIGATLDRNSISPLIITKGNDQMTLRALSDDMETTDACSGDVLTTSFSLRSDPSVVRNY 515
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G L+VE+ +VPDGIVCFF SY YM+EI++ W ++ I+ EI ++KLVF+ET D ET LA
Sbjct: 516 GHLMVELSKVVPDGIVCFFPSYMYMEEIVSLWAETSIINEISKNKLVFVETPDGRETELA 575
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L NY++ACD GRG + FSVARGKV+EG+DF+ YGR V+M GVPFQYT S L RL++L
Sbjct: 576 LANYKRACDNGRGGMLFSVARGKVSEGVDFEDGYGRCVVMLGVPFQYTESVRLKKRLDFL 635
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
R+ + IKE DFLTFDA+R AAQC+GRV+R+K DYG+MI AD+R+ R+DK+SKLP WI +
Sbjct: 636 REEYGIKEYDFLTFDAMRHAAQCLGRVLRNKNDYGLMILADERFERNDKKSKLPKWIRNC 695
Query: 699 LRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
+ + NLS DMAL IAR F R+MAQ AG+ +LL + D+E
Sbjct: 696 IDGGNSNLSVDMALSIARRFFREMAQECTGAGN----SLLGEKDVE 737
>gi|389583177|dbj|GAB65913.1| DNA excision-repair helicase, partial [Plasmodium cynomolgi strain
B]
Length = 738
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/751 (43%), Positives = 501/751 (66%), Gaps = 36/751 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F+L+D+ V+FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFQLDDLEVFFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNY--QTRHLGPAAKILAIGLSSRKNLCV 117
K + K I+CTRT HE EK E KL + + +++ L S R +
Sbjct: 62 YGKNDEG-KFIFCTRT-HEREKIDEECRKLTATFIREKKYINQKINKLGNAHSDRDRI-- 117
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+N+ +D + +L N I C +FENY+K ++ PGVYT+
Sbjct: 118 --SEFIVKNKQHIDVEDYFDIYNTSNSLEEYN-EIGLCGYFENYKKEFQFELIQPGVYTI 174
Query: 178 QDLRAFGKQQGW----------CPYFLARHMVQFANVVVYSYQYLLDPKVAG--IISKE- 224
+DL+ K G+ CPYF A+ +++ A V+V +YQY++DPKV+ I ++
Sbjct: 175 EDLKILCK--GYKNAQNVSVPICPYFCAKKIIEVAKVIVLNYQYVIDPKVSKSLFIGRDV 232
Query: 225 -----MQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAG 279
+QK ++VFDEAHNID+VC+EALS+ + Q+ E + + + ++
Sbjct: 233 NNRVNLQKNDIIVFDEAHNIDSVCLEALSLKLLGQSTEQPITSEKKDQTAVSSLFPEES- 291
Query: 280 RLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYL 338
+Y+ L G P +P L DI+K + PGNIR+AEHFL+++R +V YL
Sbjct: 292 ---KDYSLLTNSNNEGGEDPTELHYSPLLMEDIVKNVIIPGNIRKAEHFLNLMRVVVMYL 348
Query: 339 RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTI 398
+ + + EGP+SF+ +D +FC++RL ++ L+I + +++ + +
Sbjct: 349 KKYVNIYEITSEGPLSFLYKCERETKLDTSFFKFCFDRLKGILNALQIVNVEDYSALNIV 408
Query: 399 CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGT 458
C+F TL+G+Y +GF II EP+ E I DPV+Q +C D+S+A+K V +++SV++TSGT
Sbjct: 409 CNFCTLLGSYFQGFIIICEPYPE-ATGIYDPVIQFACLDSSIAMKSVIKKYRSVILTSGT 467
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNY 518
++P++LYP+LLNF V++ SF MS R+C+CP+++T+ SD +P+S++F +RSD V +NY
Sbjct: 468 ITPLELYPKLLNFKTVLTASFPMSFDRNCVCPLIVTKSSDLVPLSSQFSLRSDITVIKNY 527
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G LLVEM +PDGIV +F SY YM+E+I++W + GI+ I+ HKLVFIET+D+V TT+A
Sbjct: 528 GMLLVEMCKTIPDGIVAYFPSYIYMEEVISSWYELGIITSILDHKLVFIETKDIVSTTIA 587
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L N+++ACD G+GAVF S+ RGK+AEGIDFD+HYG+ VI+FG+P+QYTLS+IL +RL++L
Sbjct: 588 LHNFKRACDLGKGAVFLSICRGKIAEGIDFDKHYGKCVILFGIPYQYTLSRILKSRLDFL 647
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
++T+ I+E +FLTFDA+RQA+QCVGR+IR+K DYG+MIFAD RY+R+DK+SKLP WI+
Sbjct: 648 KETYNIQENEFLTFDAMRQASQCVGRIIRNKKDYGIMIFADIRYARNDKKSKLPPWIIKC 707
Query: 699 LRDAHLNLSTDMALHIAREFLRKMAQPYDKA 729
+ +++NL+ A++I+R+FL M+Q Y +
Sbjct: 708 MDMSNVNLTVSTAVNISRKFLLNMSQEYKET 738
>gi|296234101|ref|XP_002762285.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Callithrix jacchus]
Length = 682
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/529 (58%), Positives = 409/529 (77%), Gaps = 2/529 (0%)
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+
Sbjct: 124 ANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQG 183
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPG 319
NL + + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG
Sbjct: 184 NLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPG 243
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
+IR AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL S
Sbjct: 244 SIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRS 303
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L+ TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DAS
Sbjct: 304 LLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDAS 363
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
LA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ
Sbjct: 364 LAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQ 423
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I
Sbjct: 424 VAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENI 483
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMF
Sbjct: 484 QRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMF 543
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVP+ YT S IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FAD
Sbjct: 544 GVPYVYTQSHILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFAD 603
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
KR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 604 KRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 652
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAA 124
+L A
Sbjct: 121 ILHA 124
>gi|449330281|gb|AGE96540.1| DNA repair helicase [Encephalitozoon cuniculi]
Length = 742
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/766 (45%), Positives = 496/766 (64%), Gaps = 51/766 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +++V VYFPY ++YPEQ YM E+KR+LD KGHCL+EMP+GTGKT+ALLS+ SY
Sbjct: 1 MKIHIDEVLVYFPYSSVYPEQLKYMREVKRSLDNKGHCLIEMPSGTGKTVALLSMTISYQ 60
Query: 61 LSKPENPV--KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
L V K++YC+RTV E+EK L EL + Y +H + L +GL+ RKNLC+N
Sbjct: 61 LHMKSKNVHFKVVYCSRTVPEVEKALKELDRVVEYIKKHR--PIEFLGLGLTGRKNLCIN 118
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
L + N VD ACR+ V LA C+F+EN A +P VY
Sbjct: 119 KAALKSFN---VDVACRR----LVNKLAESK-----CDFYENL---ADFREVPVAVYDFL 163
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L+ G+++G CPY+L R + + ++Y Y YL+DP++ I+S E+ SVV+FDEAHN
Sbjct: 164 QLKEMGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRICAIVSSELGPNSVVIFDEAHN 223
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA--LRG 296
ID+ CIE LS+ +RR LEGA+R + + ++R K A + +Y ++ E L +
Sbjct: 224 IDSHCIEVLSIEIRRNVLEGASRAIGNLENLLKRGKP--ASGVDIQYEKVREKLVGPVPE 281
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
++P + S E +PGN+R + HF+ L+R+ ++ + +L+T ++ E SF
Sbjct: 282 SIPYYYASGEGN-----YEFLPGNLRNSFHFVSALKRITEFFKTKLKTTHLTTESTESFC 336
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
SI + +++K LRFC +RL L +L + D D H++T+ DF+T+V Y++GF +I
Sbjct: 337 KSIRELSFVEKKALRFCSQRLGMLSQSLGLDDED-MGHLKTVADFSTMVSMYSKGFVVIF 395
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPFD + + +P L+L+C D+S+A+ PVF RF++V+ITSGT+SPID+YP++LNF P
Sbjct: 396 EPFDSQASTVFNPTLRLACLDSSIAISPVFARFRNVIITSGTMSPIDMYPKILNFVPSRI 455
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPV------------------STKFDMRSDPGVARNY 518
+L R+ I P+++T+G+DQ+ + +T F +RSDP V RNY
Sbjct: 456 AEIGATLDRNSISPLIITKGNDQMTLRALSDDMETTDACSGDVLTTSFSLRSDPSVVRNY 515
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G L+VE+ +VPDGIVCFF SY YM+EI++ W ++ I+ EI ++KLVF+ET D ET LA
Sbjct: 516 GHLMVELSKVVPDGIVCFFPSYMYMEEIVSLWAETSIINEISKNKLVFVETPDGRETELA 575
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L NY++ACD GRG + FSVARGKV+EG+DF+ YGR V+M GVPFQYT S L RL++L
Sbjct: 576 LANYKRACDNGRGGMLFSVARGKVSEGVDFEDGYGRCVVMLGVPFQYTESVRLKKRLDFL 635
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
R+ IKE DFLTFDA+R AAQC+GRV+R+K DYG+MI AD+R+ R+DK+SKLP WI +
Sbjct: 636 REEHGIKEYDFLTFDAMRHAAQCLGRVLRNKNDYGLMILADERFERNDKKSKLPKWIRNC 695
Query: 699 LRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
+ + NLS DMAL IAR F R+MAQ AG+ +LL + D+E
Sbjct: 696 IDGGNSNLSVDMALSIARRFFREMAQECTGAGN----SLLGEKDVE 737
>gi|395854142|ref|XP_003799557.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Otolemur garnettii]
Length = 682
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/529 (58%), Positives = 409/529 (77%), Gaps = 2/529 (0%)
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+ L+
Sbjct: 124 ANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRILDRCQG 183
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPG 319
NL + + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG
Sbjct: 184 NLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPG 243
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
+IR AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL S
Sbjct: 244 SIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRS 303
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L+ TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DAS
Sbjct: 304 LLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDAS 363
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
LA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ
Sbjct: 364 LAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQ 423
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I
Sbjct: 424 VAISSKFESREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENI 483
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMF
Sbjct: 484 QRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMF 543
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+FAD
Sbjct: 544 GVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFAD 603
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
KR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 604 KRFARVDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 652
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAA 124
+L A
Sbjct: 121 ILHA 124
>gi|440796100|gb|ELR17209.1| Nucleotide excision repair protein, putative [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/711 (47%), Positives = 478/711 (67%), Gaps = 81/711 (11%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP- 100
MP+GTGKT++LLSLITSY L+ PE KL+YC+RTV E+EK + EL+ + Y+ + LG
Sbjct: 1 MPSGTGKTVSLLSLITSYQLAHPEVG-KLVYCSRTVPEIEKAVEELRRVVAYRDQELGDD 59
Query: 101 AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA-------LAAENPN-- 151
A K L + LS+R+NLC++ +V VD+ CR T+SWVRA L E +
Sbjct: 60 APKFLGLALSARRNLCIHPQVSQHTQGVVVDSKCRGLTSSWVRAEADKYRGLHEETTDGQ 119
Query: 152 -------IETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+E C+FFE YEK VL GVY+L DL+ G+++GWCPYFLARH++ F++V
Sbjct: 120 GRRSVGPVELCDFFEEYEKNGRD-VLLNGVYSLGDLKQIGRERGWCPYFLARHLINFSHV 178
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
V+YSYQY++DPK++ ++SKE +K S+VVFDEAHNIDNVCI+ALSV++ ++ L + R++
Sbjct: 179 VIYSYQYIIDPKISDLVSKEFKKNSIVVFDEAHNIDNVCIDALSVNIDKRILGASARSVK 238
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
++ I R KATDA +L+ EYNRLVEGL+ + + ++P LP D+++E +P NIR+A
Sbjct: 239 NLSTNITRIKATDADKLKKEYNRLVEGLSGIARIADEAKADPVLPDDVIQEVIPANIRKA 298
Query: 325 EHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL 384
E F+ +L+R +QYL+ RL T+ V E P++F+ S I KTLRFC RL SL+ L
Sbjct: 299 EDFIDLLKRFLQYLQARLNTKQVISEPPLAFLQSCQEATKIVPKTLRFCAGRLSSLLRAL 358
Query: 385 EITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP-FDERMPHIPDPVLQLSCHDASLAVK 443
EI+DT E+ + +CDFATL+GTY +GFS+IIEP DE + + + +LQ +C DAS+A++
Sbjct: 359 EISDTAEYQPLGVVCDFATLLGTYQKGFSLIIEPRSDEEVEN--NTILQYTCLDASIAMQ 416
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
P+ RF+SVVITSGTLSP+D+YPR+LNF PVV+ MSL R DQ +S
Sbjct: 417 PIIRRFRSVVITSGTLSPLDMYPRMLNFMPVVTERLGMSLNR------------DQEVIS 464
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
TKF+ R DP V RNYG LL++ ++ E ++ W++ GIL++++QHK
Sbjct: 465 TKFEGRRDPSVLRNYGALLLQFTTV----------------ETVSVWDEIGILRQVVQHK 508
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+F+ET D VE++LAL NYR C VI+FG+P+
Sbjct: 509 LLFVETPDSVESSLALSNYR--C-----------------------------VILFGIPY 537
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
T S+IL ARLE+LRD +QI+E +FLTFDA+R AAQCVGRVIR K DYG+M++ADKRY+
Sbjct: 538 MNTQSRILRARLEFLRDNYQIQEAEFLTFDAMRTAAQCVGRVIRGKKDYGIMVWADKRYN 597
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGR 734
R DKRSK+P W+ +L+ +HLNLST+MA+ +AR FL++MAQP+ +G+
Sbjct: 598 RLDKRSKMPQWVSDNLQHSHLNLSTEMAVSLARTFLKEMAQPFSLTAQLGK 648
>gi|342182871|emb|CCC92351.1| putative DNA excision repair protein, Transcription factor II H
complex, XPD subunit [Trypanosoma congolense IL3000]
Length = 811
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/764 (43%), Positives = 493/764 (64%), Gaps = 39/764 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ YM ELKR LD GH +LEMP+GTGKT LLSL+ +YV
Sbjct: 1 MKLFIEDVPVLFPYEYIYPEQLEYMTELKRGLDQGGHMVLEMPSGTGKTTTLLSLLIAYV 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKIL-AIGLSSRKNLCVN 118
+ K++YCTRTV E++KT++EL K+L + G A++ L + L+++KNLC
Sbjct: 61 HHHADEKRKVVYCTRTVGEVDKTVSELSKILKLWDAE--GTASRPLRGVCLTAKKNLCTE 118
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V + ++ D VDA CR TA W + C +F+N E + LPPG Y++
Sbjct: 119 PSVESTKSLDEVDAGCRSLTAPWQVN--------QRCVYFDNLEN--NGFDLPPGAYSVG 168
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DL+ G++ CPY+LAR ++ A++VV+S+ Y++DP VA + + M + ++VV DEAHN
Sbjct: 169 DLKRLGRKHRVCPYYLARKALKIADIVVHSFLYIVDPIVAEVTKEYMNENTIVVMDEAHN 228
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALR--- 295
+D+VC+E +S+ + ++ A N+ R+ ++R KAT+ +L+ EY+RLV GLA+
Sbjct: 229 VDDVCVEVMSLVITKEDAAQAKENVKRLGDAVDRMKATNRQKLQEEYDRLVNGLAMAQMA 288
Query: 296 ---GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL-RGRLETENVEKEG 351
G+ A + PA+P DI +EA+PG++R+A HFL ++RLV + R
Sbjct: 289 RAAGSNTTASVHVPAIPQDIAEEAIPGSLRQANHFLAFMQRLVDFTHRVVCRISRTYVAD 348
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR 410
P++F+ + ID + LR+ ERL LM TL+IT++ + ++ I F TL YT
Sbjct: 349 PLTFLTKVKEECSIDVRHLRYLTERLKVLMNTLQITNSHNYRNVSLIAHMFMTLSTHYTD 408
Query: 411 ------GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
GF ++ E D P IPDPV++L C DASLA++ VF +++SV++TSGTLSP+D+
Sbjct: 409 DRYEKPGFVVVCEASDPTRPSIPDPVVRLVCVDASLALREVFSKYRSVILTSGTLSPLDI 468
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-----PVSTKFDMRSDP----GVA 515
YP++L F PV+++SF+M+L+R CI P+V+TR S+ + V++ F +R DP V+
Sbjct: 469 YPKMLGFSPVIAKSFQMTLSRKCIAPVVVTRSSESVNITAEEVTSSFAVRKDPEAQATVS 528
Query: 516 RNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVET 575
Y LL + VPDGIVCFF Y YM E++ W SG LKE+ HKL+F+ETQ V ET
Sbjct: 529 AAYEDLLRGLAVTVPDGIVCFFTGYQYMSEVLLVWYRSGFLKELAHHKLIFVETQSVEET 588
Query: 576 TLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARL 635
++AL+NYR+ACD GRGAVF ++ARGK+AEGIDFD HYGR V+MFGVPF + + L R+
Sbjct: 589 SVALENYRRACDIGRGAVFMAIARGKIAEGIDFDSHYGRAVVMFGVPFLPPIDEPLRQRI 648
Query: 636 EYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
++ I ++ FDA+RQA+QC+GRV+R+K DYGMM+ D+R++ +DKR KLP WI
Sbjct: 649 HWMEICLGIPGNEYRNFDAMRQASQCIGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWI 708
Query: 696 LSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLS 739
L++ + NLS D A+ +AR F ++MAQP++ +G TL S
Sbjct: 709 QQCLKE-NTNLSVDAAVAVARGFFKEMAQPWEYKKDLG-TTLFS 750
>gi|118376302|ref|XP_001021333.1| DNA repair helicase [Tetrahymena thermophila]
gi|89303100|gb|EAS01088.1| DNA repair helicase [Tetrahymena thermophila SB210]
Length = 807
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/740 (42%), Positives = 485/740 (65%), Gaps = 36/740 (4%)
Query: 35 KGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELK-LLHNY 93
KGH ++EMPTGTGKT++LL+LITSY+ S + KLIYCTRTV EMEKT+ E+K +L N
Sbjct: 2 KGHGIIEMPTGTGKTVSLLALITSYLESNQDKFKKLIYCTRTVVEMEKTIEEVKFILDNR 61
Query: 94 QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA--------- 144
+ K L GLS+R NLC++ V ++RD VDA C+K TA WVRA
Sbjct: 62 KQEKPEEQFKFLCTGLSARSNLCIHPNVSRQQSRDRVDAECKKLTAPWVRAQSFEKSSRD 121
Query: 145 -------LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARH 197
+ ++ +E C+ FEN+E G+Y L+DLR +G++ CPYFLAR
Sbjct: 122 CLIILSKIQGDSDQLELCQLFENFEGKKEELKFTEGIYNLEDLRQYGEKNNICPYFLARR 181
Query: 198 MVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLE 257
++ +N++VY+Y Y+LD K+ I+ KE K+ +VVFDEAHNIDNVC+E +V + R+ L+
Sbjct: 182 LLNQSNIIVYNYMYMLDAKMTEILDKEFWKDCLVVFDEAHNIDNVCLEVFTVDINRKLLD 241
Query: 258 GATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPA--LPSDILKE 315
A +N+ + +++R + + +L +EYN+L++GL +G L + L+ + LPS++ E
Sbjct: 242 MAYKNIEVLGTKVDRVETINHEKLESEYNQLLQGLKNKGVLNDNQLNENSKQLPSELTAE 301
Query: 316 AVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYE 375
++P +I++A+ F+ L+++V +L+ RL+ +N + P F+ + + +D +L+ E
Sbjct: 302 SIPFHIKKAKPFIQFLKKIVIFLKNRLKEKNATTQDPPQFINDMYISSHLDSYSLKLAGE 361
Query: 376 RLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSC 435
RL+ L+ +LEIT+TDEF I TI F +L+ +Y RGF II +P + + + DP++ +C
Sbjct: 362 RLNMLLNSLEITETDEFSAIDTITHFTSLLASYARGFKIIYQP-NPKDGSLNDPLMTFAC 420
Query: 436 HDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTR 495
D SLA+ VF +F+SV++TSGT+SP+D+YP++LNF+P + P++ T+
Sbjct: 421 LDCSLAMTHVFTQFKSVILTSGTMSPLDIYPKILNFNPYTVK------------PLIATK 468
Query: 496 GSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI 555
G D +S++++ R++ V R+YG LL+++ VPDGIV FF SY YM++II WN GI
Sbjct: 469 GIDFTQLSSEYEARANMTVTRSYGSLLIDLSKFVPDGIVAFFPSYMYMEKIIYEWNQEGI 528
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRL 615
L E+ ++KL++ E++DV +T+ +L +YRKACDCGRGA+FFS+ARGK+AEGIDF+ HYGR
Sbjct: 529 LDEMRKYKLLYFESKDVAQTSQSLFHYRKACDCGRGAIFFSIARGKIAEGIDFNEHYGRA 588
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMM 675
V+M G P Q + IL+ R +YL + F+I + +++ FDA+RQ AQC+GRV+R K DYG+M
Sbjct: 589 VVMVGFPVQNSKDPILIERCKYLTENFKITKNEYIEFDAMRQTAQCLGRVMRGKTDYGIM 648
Query: 676 IFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRK 735
I A+KR++R +SKLP WI + D ++++S D+ + +F +KM KA + RK
Sbjct: 649 IMAEKRFARSLVKSKLPNWIKKQMPDCNVDISVDITSILTEQFFKKMG----KAFELDRK 704
Query: 736 TLLSQADLEKMTNDGSINEM 755
+ +Q E++ N+M
Sbjct: 705 SYFTQEQFEEIDKLNQDNKM 724
>gi|294879226|ref|XP_002768609.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
gi|239871280|gb|EER01327.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
Length = 887
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/827 (42%), Positives = 503/827 (60%), Gaps = 108/827 (13%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAK-GHCLLEMPTGTGKTIALLSLITSYVL 61
++ + V FPYD IYPEQ YM LK+ALDA G L+EMPTGTGKT+ ++SLITSY L
Sbjct: 6 LNIDGLRVLFPYDAIYPEQVQYMHYLKQALDASHGQGLIEMPTGTGKTVTIMSLITSYQL 65
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA------KILAIGLSSRKNL 115
S P+ KL+YCTRTV EM + + ELKL+ Y+ R L K L IGLS+R+N+
Sbjct: 66 SHPQMG-KLVYCTRTVPEMNQAIRELKLVIEYRERVLASEKPDEAPQKFLGIGLSARRNM 124
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVR-------------ALAAENPNIET-------- 154
C++ V +RD +D CR+ T++++ + A N++
Sbjct: 125 CIHPDVANQADRDKIDIKCREMTSNFLNKKSNRFSQLSSGVSKANSGRNVQKPIEISQKF 184
Query: 155 --------CEFFENYEK------------AASAA-------VLPPGVYTLQDLRAFGKQQ 187
C FFE Y++ + SA+ +P GVYTL+DLR G +
Sbjct: 185 SQNFLTCRCSFFEQYDELIGGVGKRYNNDSESASNEEKKKFAIPSGVYTLEDLRVAGGAE 244
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVA-----------------GIISKEMQKE-- 228
GWCPY++++ +++ A+V+V++YQY+LDP+V+ G ++KE ++
Sbjct: 245 GWCPYYMSKRLLRHADVIVFNYQYVLDPRVSASALIAGEASGRGVMTHGALAKEGEERPA 304
Query: 229 ---------------SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
+VV+FDEAHNID++C++AL+V+V R+T++ A+ N+ R+ E+ +
Sbjct: 305 ALGVDNNDDDQQFEPAVVIFDEAHNIDDICMDALTVTVDRKTIDRASSNVKRLQHEVTQL 364
Query: 274 KATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPAL---PSDILKEA-------VPGNIRR 323
K D RL+AE L+ GLA + S AL P+++ K +PGN+R+
Sbjct: 365 KKVDEARLKAEVENLMRGLAPASGMSEEDESISALRFGPNELKKAVSGVSHLVIPGNVRQ 424
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHFL VL+++ +LR + + EGP+ F+ + + I+ +T++ RL SLM T
Sbjct: 425 AEHFLGVLQQVCAFLRAYIRVDKARAEGPLMFLHELESQQFIEARTMKAFDARLRSLMNT 484
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVL----QLSCHDAS 439
L+ITD DEF + ICD TL +++GF+++ +P E + PVL Q +
Sbjct: 485 LKITDIDEFSPLTKICDLCTLASLHSKGFAVLTDPCPE--AEVSQPVLREVAQYLVKNVK 542
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF-HPVVSRSFKMSLTRDCICPMVLTRGSD 498
A+ + S+V+TSGTLSP+ +Y +LL VVS + +SL RDCI P+++TR +D
Sbjct: 543 FAICSRREICFSLVLTSGTLSPLSMYSKLLGLDRVVVSEALDISLERDCIRPLIVTRSND 602
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ +S+ F R D V++ YG LL E+V +VPDG+VCFF S +M +++ TW DSG L
Sbjct: 603 VV-LSSSFQSRKDEEVSKCYGTLLEELVQVVPDGVVCFFTSKVFMQQVVRTWYDSGTLAR 661
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
+ HK+VF ET DVV TT+AL NYR+ACD GRG +F +VARGKV+EGIDFDRHYGR V++
Sbjct: 662 LSTHKVVFFETDDVVSTTIALSNYREACDQGRGGLFLAVARGKVSEGIDFDRHYGRAVVL 721
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
FGVPFQY+LS+ L ARL Y+RDT I EG+FLTFDA+R AAQCVGRV+RSK DYG+M+ A
Sbjct: 722 FGVPFQYSLSRRLRARLAYIRDTHGISEGEFLTFDAMRAAAQCVGRVLRSKQDYGLMVLA 781
Query: 679 DKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
D RY+R DKR KLP WI L A NL+ DMA+ A+EFL M+QP
Sbjct: 782 DARYARADKRKKLPPWIGKFLIPAFSNLTVDMAVSSAKEFLLSMSQP 828
>gi|146088245|ref|XP_001466027.1| TFIIH basal transcription factor complex helicase subunit
[Leishmania infantum JPCM5]
gi|134070128|emb|CAM68462.1| TFIIH basal transcription factor complex helicase subunit
[Leishmania infantum JPCM5]
Length = 813
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/772 (41%), Positives = 496/772 (64%), Gaps = 43/772 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ Y+ ELKR LD GH +LEMP+GTGKTI+LLS++ +Y+
Sbjct: 1 MKLYVEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTR--HLGPAAKILAIGLSSRKNLCV 117
K++YCTRTV EM KT+ E+ KLL +++ L P + + L+++KNLC+
Sbjct: 61 HHHAHEKRKVVYCTRTVEEMVKTMGEMRKLLKHWEAEGEQLRP---LRGLCLTAKKNLCI 117
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+ V + + D VDA CR TA W + C +F+ +A LPPGVY+L
Sbjct: 118 ETSVASLIHPDEVDAGCRSITAPWQQE--------GRCGYFDTLAQAPLE--LPPGVYSL 167
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
DL+ FG+Q CPY+L R + +++V+SY Y++DP V+ + + + + ++VV DE H
Sbjct: 168 DDLKDFGEQHHVCPYYLVRKALPVVDIIVHSYLYMVDPVVSEVTKEFLNENTIVVMDEGH 227
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--- 294
N+D+VCIEA+S+ + ++ A +N+ +++E++ KAT+ L+ EY+RLV GLA+
Sbjct: 228 NVDDVCIEAMSLILTKKDSLDAKQNMKDLSKELDHLKATNRQMLQDEYDRLVNGLAMTEM 287
Query: 295 -RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY---LRGRLETENVEKE 350
R A + PA+P+++ + A+P ++R+A HFL ++RLV + + R+ V
Sbjct: 288 ARDPEQRALVEAPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIVARITRTYVAD- 346
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY-- 408
P++F+ + ++ R+ ERL L+ TL++T+ ++ + I TL+ Y
Sbjct: 347 -PLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNAGKYRPVALIAQMYTLLSMYYT 405
Query: 409 -----TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
GF ++ E FD P IPDPV++ C DASLA++ F R++SV++TSGTLSP+D
Sbjct: 406 DDRYEKPGFVVVCEAFDPTRPQIPDPVIRTVCVDASLALRDTFARYRSVILTSGTLSPMD 465
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP-----VSTKFDMRSDPG----V 514
+YP++L F P +S+SF+M+L+R CI P+++TR S+ + V++ F +R++P V
Sbjct: 466 IYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTSSFKVRTNPTAQALV 525
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
Y LL+E+ VPDG+VCFF Y YM E++ W+ SG L+++ +HKL+F+ETQ V E
Sbjct: 526 TSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLAWHSSGFLQKLAKHKLIFVETQGVEE 585
Query: 575 TTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
T++AL NYR+ACD GRGA+F S+ARGK+AEGIDFDRHYGR V+MFGVPF + L R
Sbjct: 586 TSVALANYRRACDIGRGAIFMSIARGKIAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQR 645
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
+ ++ I E +F FDA+RQA+QC+GRV+R+K DYGMM+ DKR++ +DK K+P W
Sbjct: 646 MHWMEVCLGISESEFRNFDAMRQASQCIGRVLRNKTDYGMMLLVDKRFALNDKVKKIPRW 705
Query: 695 ILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
I+ L++ + NLS D A+ +AR F ++MAQP++ +G TLLS+ L +M
Sbjct: 706 IVQCLKN-NTNLSVDAAVAVARGFFKEMAQPWEHEKDLG-TTLLSKETLRRM 755
>gi|401423118|ref|XP_003876046.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492286|emb|CBZ27561.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 813
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/772 (41%), Positives = 498/772 (64%), Gaps = 43/772 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ Y+ ELKR LD GH +LEMP+GTGKTI+LLS++ +Y+
Sbjct: 1 MKLYVEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTR--HLGPAAKILAIGLSSRKNLCV 117
K++YCTRTV EM KT+ E+ KLL +++ L P + + L+++KNLC+
Sbjct: 61 HHHAYEKRKVVYCTRTVEEMVKTMGEMRKLLKHWEAEGEQLRP---LRGLCLTAKKNLCI 117
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+ V + + D VDA CR TA W + C +++ +A LPPGVY+L
Sbjct: 118 ETSVASLIHPDEVDAGCRSITAPWQQE--------GRCGYYDTLVQAPLE--LPPGVYSL 167
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
DL+ FG+Q CPY+L R + +++V+SY Y++DP V+ + + + + ++VV DE H
Sbjct: 168 DDLKDFGEQHHVCPYYLVRKALPVVDIIVHSYLYMVDPVVSEVTKEFLNENTIVVMDEGH 227
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--- 294
N+D+VCIEA+S+ + ++ A +N+ +++E++ KAT+ +L+ EY+RLV GLA+
Sbjct: 228 NVDDVCIEAMSLILTKKDSLDAKQNMKDLSKELDHLKATNRQQLQDEYDRLVNGLAMAEM 287
Query: 295 -RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY---LRGRLETENVEKE 350
R A + PA+P+++ + A+P ++R+A HFL ++RLV + + R+ V
Sbjct: 288 ARDLEQRALVETPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIVARITRTYVAD- 346
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY-- 408
P++F+ + ++ R+ ERL L+ TL++T+ ++ + I TL+ Y
Sbjct: 347 -PLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNAGKYRPVALIAQMYTLLSMYYT 405
Query: 409 -----TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
GF ++ E FD P IPDPV++ C DASLA++ F R++SV++TSGTLSP+D
Sbjct: 406 DDRYEKPGFVVVCEAFDPTRPQIPDPVIRTVCVDASLALRDTFSRYRSVILTSGTLSPMD 465
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP-----VSTKFDMRSDPG----V 514
+YP++L F P +S+SF+M+L+R CI P+++TR S+ + V++ F +R++P V
Sbjct: 466 IYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTSSFKVRTNPTAQALV 525
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
Y LL+E+ VPDG+VCFF Y YM E++ TW+ SG L+++ +HKL+F+ETQ V E
Sbjct: 526 TSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLTWHSSGFLQKLAKHKLIFVETQGVEE 585
Query: 575 TTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
T++AL NYR+ACD GRGA+F S+ARGK+AEGIDFDRHYGR V+MFGVPF + L R
Sbjct: 586 TSVALANYRRACDIGRGAIFMSIARGKIAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQR 645
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
+ ++ I E +F FDA+RQA+QC+GRV+R+K DYGMM+ DKR++ +DK K+P W
Sbjct: 646 MHWMEVCLGISESEFRNFDAMRQASQCIGRVLRNKTDYGMMLLVDKRFALNDKIKKIPRW 705
Query: 695 ILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
I+ L++ + NLS D A+ +AR F ++MAQP++ +G TLLS+ L +M
Sbjct: 706 IVQCLKN-NTNLSVDAAVAVARGFFKEMAQPWEHEKDLG-TTLLSKETLRRM 755
>gi|154338549|ref|XP_001565499.1| putative TFIIH basal transcription factor complex helicase subunit
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062548|emb|CAM42411.1| putative TFIIH basal transcription factor complex helicase subunit
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 813
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/772 (42%), Positives = 496/772 (64%), Gaps = 43/772 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ Y+ ELKR LD GH +LEMP+GTGKTI+LLS++ +Y+
Sbjct: 1 MKLYVEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTR--HLGPAAKILAIGLSSRKNLCV 117
K++YCTRTV EM KT+ E+ KLL +++ L P + + L+++KNLC+
Sbjct: 61 HHHAHEKRKVVYCTRTVEEMVKTMGEMRKLLKHWEAEGEQLRP---LRGLCLTAKKNLCI 117
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
V + + D VDA CR TA W + C +++ + LPPGVY+L
Sbjct: 118 EPSVTSLIHPDKVDAGCRSITAPWQQE--------GRCGYYDTLIQGPLE--LPPGVYSL 167
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
DL+ FG+Q CPY+L R + +++V+SY Y++DP V+ + + + ++VV DE H
Sbjct: 168 DDLKDFGEQHHVCPYYLVRKALPIVDIIVHSYLYMVDPVVSEVTKAFLNENTIVVMDEGH 227
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALR-- 295
N+D+VCIEA+S+ + ++ A +N+ +N+E++ KAT+ +L+ EY+RLV GLA+
Sbjct: 228 NVDDVCIEAMSLILTKKDSLDAKQNMKDLNKELDHLKATNRQQLQDEYDRLVNGLAMAEM 287
Query: 296 GNLPN--AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY---LRGRLETENVEKE 350
+P A + PA+P+++ + A+P ++R+A HFL ++RLV + + R+ V
Sbjct: 288 ARIPEERAVVVVPAIPANVAEGAIPASLRQANHFLVFMQRLVDFTHRIVARITRTYVAD- 346
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY-- 408
P++F+ + ++ R+ ERL L+ TL++T+T ++ + I TL+ Y
Sbjct: 347 -PLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNTGKYRPVALIAQMYTLLSMYYT 405
Query: 409 -----TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
GF ++ E FD P IPDPV++ C DASLA++ F R++SV++TSGTLSP+D
Sbjct: 406 DDRYEKPGFVVVCEAFDPTRPQIPDPVIRTVCVDASLALRDTFGRYRSVILTSGTLSPMD 465
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP-----VSTKFDMRSDPG----V 514
+YP++L F P VS+SF+M+L+R CI P+++TR S+ + V++ F +R++P V
Sbjct: 466 IYPKILGFAPAVSKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTSSFKVRTNPAAQALV 525
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
Y LL E+ VPDG+VCFF Y YM E++ W+ SG L+++ +HKL+F+ETQ V E
Sbjct: 526 TSAYESLLFELAKTVPDGMVCFFTGYQYMGEVLLAWHSSGFLQKLAKHKLIFVETQGVEE 585
Query: 575 TTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
T++AL NYR+ACD GRGA+F S+ARGK+AEGIDFDRHYGR VIMFGVPF + L R
Sbjct: 586 TSVALANYRRACDIGRGAIFMSIARGKIAEGIDFDRHYGRAVIMFGVPFLPPNDEPLRQR 645
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
+ ++ I E +F FDA+RQA+QC+GRV+R+K DYGMM+ DKR++ +DK +K+P W
Sbjct: 646 MHWMEVCLGISESEFRNFDAMRQASQCIGRVLRNKTDYGMMLLVDKRFALNDKCNKIPRW 705
Query: 695 ILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
I+ L++ + NLS D A+ +AR F ++MAQP++ +G TLLS+ L KM
Sbjct: 706 IVQCLKN-NTNLSVDAAVAVARGFFKEMAQPWEHEKDLG-TTLLSKETLRKM 755
>gi|398016273|ref|XP_003861325.1| TFIIH basal transcription factor complex helicase subunit, putative
[Leishmania donovani]
gi|322499550|emb|CBZ34624.1| TFIIH basal transcription factor complex helicase subunit, putative
[Leishmania donovani]
Length = 813
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/772 (41%), Positives = 496/772 (64%), Gaps = 43/772 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ Y+ ELKR LD GH +LEMP+GTGKTI+LLS++ +Y+
Sbjct: 1 MKLYVEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTR--HLGPAAKILAIGLSSRKNLCV 117
K++YCTRTV EM KT+ E+ KLL +++ L P + + L+++KNLC+
Sbjct: 61 HHHAHEKRKVVYCTRTVEEMVKTMGEMRKLLKHWEAEGEQLRP---LRGLCLTAKKNLCI 117
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+ V + + D VDA CR TA W + C +++ +A LPPGVY+L
Sbjct: 118 ETSVASLIHPDEVDAGCRSITAPWQQE--------GRCGYYDTLAQAPLE--LPPGVYSL 167
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
DL+ FG+Q CPY+L R + +++V+SY Y++DP V+ + + + + ++VV DE H
Sbjct: 168 DDLKDFGEQHHVCPYYLVRKALPVVDIIVHSYLYMVDPVVSEVTKEFLNENTIVVMDEGH 227
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--- 294
N+D+VCIEA+S+ + ++ A +N+ +++E++ KAT+ L+ EY+RLV GLA+
Sbjct: 228 NVDDVCIEAMSLILTKKDSLDAKQNMKDLSKELDHLKATNRQMLQDEYDRLVNGLAMTEM 287
Query: 295 -RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY---LRGRLETENVEKE 350
R A + PA+P+++ + A+P ++R+A HFL ++RLV + + R+ V
Sbjct: 288 ARDPEQRALVEAPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIVARITRTYVAD- 346
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY-- 408
P++F+ + ++ R+ ERL L+ TL++T+ ++ + I TL+ Y
Sbjct: 347 -PLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNAGKYRPVALIAQMYTLLSMYYT 405
Query: 409 -----TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
GF ++ E FD P IPDPV++ C DASLA++ F R++SV++TSGTLSP+D
Sbjct: 406 DDRYEKPGFVVVCEAFDPTRPQIPDPVIRTVCVDASLALRDTFARYRSVILTSGTLSPMD 465
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP-----VSTKFDMRSDPG----V 514
+YP++L F P +S+SF+M+L+R CI P+++TR S+ + V++ F +R++P V
Sbjct: 466 IYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTSSFKVRTNPTAQALV 525
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
Y LL+E+ VPDG+VCFF Y YM E++ W+ SG L+++ +HKL+F+ETQ V E
Sbjct: 526 TSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLAWHSSGFLQKLAKHKLIFVETQGVEE 585
Query: 575 TTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
T++AL NYR+ACD GRGA+F S+ARGK+AEGIDFDRHYGR V+MFGVPF + L R
Sbjct: 586 TSVALANYRRACDIGRGAIFMSIARGKIAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQR 645
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
+ ++ I E +F FDA+RQA+QC+GRV+R+K DYGMM+ DKR++ +DK K+P W
Sbjct: 646 MHWMEVCLGISESEFRNFDAMRQASQCIGRVLRNKTDYGMMLLVDKRFALNDKVKKIPRW 705
Query: 695 ILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
I+ L++ + NLS D A+ +AR F ++MAQP++ +G TLLS+ L +M
Sbjct: 706 IVQCLKN-NTNLSVDAAVAVARGFFKEMAQPWEHEKDLG-TTLLSKETLRRM 755
>gi|429963255|gb|ELA42799.1| DNA repair helicase (rad3) [Vittaforma corneae ATCC 50505]
Length = 747
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/773 (43%), Positives = 479/773 (61%), Gaps = 61/773 (7%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++ V +YFPY+ IYPEQ Y+ L +++ GH L+EMP+GTGKT+ALLS SY
Sbjct: 1 MRFLIDGVPIYFPYEKIYPEQLKYIKSLLKSIQTPGHVLIEMPSGTGKTVALLSCTVSYQ 60
Query: 61 LSKPEN--PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
L P K++YC+RT+ E++K L EL+ L Y +H+ + L +GLS R N+C+N
Sbjct: 61 LHMKAKGVPFKIVYCSRTLPEIDKALKELRSLVEYIKKHV--SFDFLGVGLSKRGNMCIN 118
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
L + + V+ CRK T + EN C+F+EN A +P GVY
Sbjct: 119 KEALGSFD---VEITCRKMTNHF------ENMK---CDFYEN-----KATSIPYGVYDFT 161
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
+++ G + G CPYF R+ + + ++Y Y YL++P + IISKE+ K+S VVFDEAHN
Sbjct: 162 EIKELGAKMGVCPYFFVRNHLPLFDCIIYPYNYLIEPSIFSIISKELPKDSFVVFDEAHN 221
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG-- 296
ID+ CIEALS+ + R TLE A+R +S I +I+ K RLR EY + + + G
Sbjct: 222 IDSHCIEALSIEISRNTLEAASRIMSVIESKIKSKKQEIDRRLRKEYELMFKTMEYTGEN 281
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+P+ + +N E PGN+R A HF+ V++RL+++L+ +L+T ++ E SF+
Sbjct: 282 TIPHFFNTNKP-------ELAPGNLRNASHFVSVMKRLIEFLKTKLKTTHLTVESIKSFI 334
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
SI ID+KTL F +R+ ++ +L + D DE + +I +F T++ Y++GFS+I
Sbjct: 335 QSIKELTFIDKKTLSFVSQRMGIMVQSLGVED-DELYKLLSIANFGTMLSIYSKGFSVIF 393
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EP+D M + +PVL+LSC DAS+A+ VF F++V+ITSGTLSPI++YP++LNF P
Sbjct: 394 EPYD-TMSGVFNPVLRLSCLDASIAMSHVFKNFRNVIITSGTLSPIEMYPKILNFVPSSI 452
Query: 477 RSFKMSLTRDCICPMVLTRGSDQL-------------------------PVSTKFDMRSD 511
++L R+ P+++T+G DQ+ ++T F +R+D
Sbjct: 453 VEIGITLCRNSTSPLIITKGDDQMLLKNSKDDEYEMLEMQKSSMSQADGKITTSFALRAD 512
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD 571
P V RNYG L+ + IVPD IV FF SY YM+E+I W++S +++EI+Q KLVFIET D
Sbjct: 513 PSVVRNYGNLITSLSKIVPDNIVVFFPSYIYMEEVITLWSESNVMEEILQSKLVFIETPD 572
Query: 572 VVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
ET AL NYRKACD GRGAV FSVARGKV+EG+DF+ YGR V+M GVPF YT S L
Sbjct: 573 FRETETALRNYRKACDMGRGAVLFSVARGKVSEGVDFEHGYGRAVVMLGVPFMYTESVRL 632
Query: 632 LARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKL 691
RL+Y+R IKE +FL FDA+R AAQC+GRV+R+K DYG+MI AD+R+ K SK+
Sbjct: 633 KERLKYMRQEHGIKEYEFLVFDAMRHAAQCLGRVLRNKTDYGLMIMADQRFGAQSKISKM 692
Query: 692 PGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
P WI + + LS DMAL IA+ F ++MAQP G LL + D++
Sbjct: 693 PKWIQERIEKGNCGLSIDMALSIAKMFYKEMAQPVSGDGV----ALLDEKDID 741
>gi|154276530|ref|XP_001539110.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
gi|150414183|gb|EDN09548.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
Length = 683
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/670 (47%), Positives = 441/670 (65%), Gaps = 44/670 (6%)
Query: 77 VHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK 136
+ E+EK LAELK L Y+ + LG A +GL+SRKNLC++ V ++ VDA CR
Sbjct: 1 MSEIEKALAELKALMKYRAQQLGFAEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRS 60
Query: 137 RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLAR 196
TA +V+ + ++E C +
Sbjct: 61 LTAGFVKEKKEKGEDVELCIY--------------------------------------- 81
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
H + F V++YSY YLLDPK+A +S+E+ K+S+VVFDEAHNIDNVCIE+LS+ + +L
Sbjct: 82 HEMPFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSL 141
Query: 257 EGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILK 314
A+R + + ++IE K +DA +L+ EY +LVEGL A ++NPALP D+LK
Sbjct: 142 RKASRGANNLERKIEEMKRSDAEKLQNEYQKLVEGLREADEARQEEQLMANPALPDDLLK 201
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCY 374
EAVPGNIRRAEHF+ L+R ++YL+ R++ + E P+SF+A + I++K LRFC
Sbjct: 202 EAVPGNIRRAEHFVAFLKRFIEYLKTRMKITHTISETPLSFLAHLKDLTFIERKPLRFCA 261
Query: 375 ERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLS 434
ERL SL+ TLE+ + +++ +Q + FATLV TY +GF +I+EPF+ +P+P+L +
Sbjct: 262 ERLTSLVRTLELMNLEDYQPLQQVAAFATLVATYEKGFLLILEPFESETATVPNPILHFT 321
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C DA++A+KPVFDRF SV++TSGTLSP+++YP++L F V+ S+ M+L R PMV+T
Sbjct: 322 CLDAAIAIKPVFDRFSSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSFLPMVVT 381
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG 554
RGSDQ +S+ F +R+DPGV RNYG LL+E I PDG+V FF SY YM+ II+ W G
Sbjct: 382 RGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPSYLYMESIISMWQGMG 441
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
IL + +KL+ +ET D E++LAL+ YR AC GRGAV VARGKV+EGIDFD HYGR
Sbjct: 442 ILDLVWNYKLILVETPDSQESSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHHYGR 501
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
VI GVPFQYT S+IL ARLE+LR+ ++I+E DFL+FDA+R AAQC+GRVIR K DYG+
Sbjct: 502 AVICIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAAQCLGRVIRGKDDYGV 561
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGR 734
MI AD+R+ + +R++LP WI + ++ NLSTDMA+ A+ FLR MAQP+ G
Sbjct: 562 MILADRRFQK--RRTQLPKWISQAMLESETNLSTDMAVATAKSFLRTMAQPFKSKDQEGI 619
Query: 735 KTLLSQADLE 744
T S DLE
Sbjct: 620 ST-WSLTDLE 628
>gi|71410154|ref|XP_807386.1| TFIIH basal transcription factor complex helicase subunit
[Trypanosoma cruzi strain CL Brener]
gi|70871375|gb|EAN85535.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma cruzi]
Length = 804
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/765 (42%), Positives = 488/765 (63%), Gaps = 41/765 (5%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+EDV V FPY+ IYPEQ YM ELK+ LD GH +LEMP+GTGKT LLSL+ +Y+
Sbjct: 5 IEDVLVLFPYEYIYPEQLEYMTELKKGLDQGGHIVLEMPSGTGKTTTLLSLLIAYIHYHA 64
Query: 65 ENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA 123
+ K+IYCTRTV EM KT+ EL KLL + T LG + + L+++KNLC+ S V +
Sbjct: 65 DEKRKVIYCTRTVEEMTKTMGELRKLLELWNTDELGSNRPLRGLCLTAKKNLCIESTVAS 124
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
+ VDA CR TA W + C +F+N E+ LPPG Y+++DL+ F
Sbjct: 125 QRYPEDVDAGCRSLTAPWQTS--------NRCAYFDNLERIPFE--LPPGAYSVEDLKQF 174
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G+ CPY+L R ++ ++VV+S+ Y++DP VA + + ++VV DE HN+D+VC
Sbjct: 175 GEAHQLCPYYLVRKALRVVDIVVHSFLYIVDPIVAEVTKGYFNENAIVVMDEGHNVDDVC 234
Query: 244 IEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--------R 295
IEA+S+ + ++ A N+ +N + KAT+ +L+ EY+RLV GLA+
Sbjct: 235 IEAMSLIITKEDAAQAKENVKLLNAAADHLKATNRQQLQDEYDRLVNGLAMVEMARSVDS 294
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL-RGRLETENVEKEGPVS 354
+P + P++PS+I +EA+PG++R+A HFL ++RLV + R P++
Sbjct: 295 MMMP---VQAPSIPSEIAEEAIPGSLRQANHFLSFIQRLVDFTHRVVCRISRTYVADPLT 351
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR--- 410
F++ + +D + R+ ERL LM TL+IT++ +F ++ I + TL YT
Sbjct: 352 FLSKVRDECAVDIRHFRYLTERLKVLMNTLQITNSHKFRNVSLIAQMYMTLSTHYTDDRY 411
Query: 411 ---GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
GF ++ E D P +PDPV++L C DASLA++ F +++SVV+TSGTLSP+D+YP+
Sbjct: 412 EKPGFVVVCEAHDPTRPAVPDPVIRLVCVDASLALREAFSKYRSVVLTSGTLSPLDIYPK 471
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-----PVSTKFDMRSDP----GVARNY 518
+L F PV+++SF+M+L+R CI P+V+TR ++ + +++ F +R++P V+ Y
Sbjct: 472 ILGFTPVIAKSFQMTLSRKCIAPVVVTRSTESVNITMEEITSSFVVRTNPLAQDIVSSAY 531
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
LL + VPDGIVCFF Y YM E++ W+ SG LKE+ Q+KL+FIETQ V ET++A
Sbjct: 532 EDLLRGLGKTVPDGIVCFFTGYQYMGEVLLGWHRSGFLKELAQYKLIFIETQSVEETSIA 591
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
L NYR+ACD GRGA+F ++ARGK+AEGIDFDRHYGR V+MFGVPF + L R+ ++
Sbjct: 592 LANYRRACDIGRGAIFMAIARGKIAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQRIYWM 651
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
I ++ FDA+RQA+QC+GRV+R+K DYGMM+ D+R++ +DKR KLP WI
Sbjct: 652 ETCLGIPGNEYRNFDAMRQASQCIGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWIQQC 711
Query: 699 LRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADL 743
L++ + NLS D A+ +AR F ++MAQP++ +G TL S+ L
Sbjct: 712 LKE-NTNLSVDAAIAVARGFFKEMAQPWEHKRDLG-TTLFSKETL 754
>gi|261330675|emb|CBH13660.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma brucei gambiense DAL972]
Length = 819
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/769 (43%), Positives = 492/769 (63%), Gaps = 37/769 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ YM ELK+ LD GH +LEMP+GTGKT LLSL+ +Y+
Sbjct: 17 MKLFIEDVPVLFPYEYIYPEQLEYMTELKKGLDQGGHMVLEMPSGTGKTTTLLSLLIAYL 76
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNS 119
+ K++YCTRTV E++KT +EL K+L ++T +G + + + L+++KNLC+
Sbjct: 77 HHHADEKRKVVYCTRTVGEVDKTASELRKILGLWETEEVG-SRPLRGVCLTAKKNLCIEP 135
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
V++ + D VDA CR TA W + C +F+ E L PG Y+L D
Sbjct: 136 SVVSRRHLDDVDAGCRSLTAPW--------QTDQRCVYFDTLENQGFD--LRPGAYSLSD 185
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ G++ CPY+LAR ++ A++V++S+ Y++DP VA + + M + ++VV DEAHN+
Sbjct: 186 LKRLGEENHVCPYYLARKALKVADIVIHSFLYIVDPIVAEVTKEYMDENTIVVMDEAHNV 245
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL----R 295
D+VCIEA+S+ V + A N+ ++N+ ++R KAT+ +L+ EY+RLV GLA+ R
Sbjct: 246 DDVCIEAMSLIVTKDDAFQAKDNVKKLNEAVDRMKATNRQKLQEEYDRLVNGLAMAELAR 305
Query: 296 GNLPNAWLSNPAL--PSDILKEAVPGNIRRAEHFLHVLRRLVQYL-RGRLETENVEKEGP 352
A +S AL P DI +EA+PG++R+A HFL ++RLV + R P
Sbjct: 306 SGESTAGVSVQALNIPQDIAEEAIPGSLRQANHFLAFMQRLVDFTHRVVCRISRTYVADP 365
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR- 410
++F+ + +D + LR+ ERL L+ TL+IT F ++ I F TL YT
Sbjct: 366 LTFLTKVKEECSVDVRHLRYLTERLKVLLNTLQITSAHSFHNVSLIAQMFMTLSTHYTDD 425
Query: 411 -----GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
GF ++ E D P IPDPV++L C DASLA++ VF +++SV++TSGTLSP+D+Y
Sbjct: 426 RYEKPGFVVVCEASDPTRPSIPDPVIRLVCVDASLALREVFAKYRSVILTSGTLSPLDIY 485
Query: 466 PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-----PVSTKFDMRSDP----GVAR 516
P++L F PV+++SF+M+L+R CI P+V+TR S+ + V++ F +R +P V+
Sbjct: 486 PKMLGFSPVIAKSFQMTLSRKCIAPVVVTRSSESVNITAEEVTSSFVVRKNPEAQATVSA 545
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
Y LL + VPDGIVCFF Y YM E++ W+ SG LKE+ +HKL+F+ETQ V +T
Sbjct: 546 AYEDLLRGLAKTVPDGIVCFFTGYQYMSEVLLGWHRSGFLKELSRHKLIFVETQSVDDTA 605
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
AL++YR+ACD GRGA+F S+ARGK+AEGIDFD HYGR V+MFGVPF + + L R+
Sbjct: 606 TALESYRRACDIGRGAIFMSIARGKIAEGIDFDSHYGRAVVMFGVPFLPPIDEPLRQRIH 665
Query: 637 YLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIL 696
++ I ++ FDA+RQA+QC+GRV+R+K DYGMM+ D+R++ +DKR KLP WI
Sbjct: 666 WMEICLGIPGSEYRNFDAMRQASQCIGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWIQ 725
Query: 697 SHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
L++ + NLS D A+ +AR F ++MAQP++ +G TL S L +
Sbjct: 726 QCLKE-NTNLSVDAAVAVARGFFKEMAQPWEYKRDLG-TTLFSVETLAR 772
>gi|72393255|ref|XP_847428.1| TFIIH basal transcription factor complex helicase subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62175150|gb|AAX69298.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma brucei]
gi|70803458|gb|AAZ13362.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 819
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/769 (43%), Positives = 492/769 (63%), Gaps = 37/769 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ YM ELK+ LD GH +LEMP+GTGKT LLSL+ +Y+
Sbjct: 17 MKLFIEDVPVLFPYEYIYPEQLEYMTELKKGLDQGGHMVLEMPSGTGKTTTLLSLLIAYL 76
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNS 119
+ K++YCTRTV E++KT +EL K+L ++T +G + + + L+++KNLC+
Sbjct: 77 HHHADEKRKVVYCTRTVGEVDKTASELRKILGLWETEEVG-SRPLRGVCLTAKKNLCIEP 135
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
V++ + D VDA CR TA W + C +F+ E L PG Y+L D
Sbjct: 136 SVVSRRHLDDVDAGCRSLTAPW--------QTDQRCVYFDTLENQGFD--LRPGAYSLSD 185
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ G++ CPY+LAR ++ A++V++S+ Y++DP VA + + M + ++VV DEAHN+
Sbjct: 186 LKRLGEENHVCPYYLARKALKVADIVIHSFLYIVDPIVAEVTKEYMDENTIVVMDEAHNV 245
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL----R 295
D+VCIEA+S+ V + A N+ ++N+ ++R KAT+ +L+ EY+RLV GLA+ R
Sbjct: 246 DDVCIEAMSLIVTKDDAFQAKDNVKKLNEAVDRMKATNRQKLQEEYDRLVNGLAMAELAR 305
Query: 296 GNLPNAWLSNPAL--PSDILKEAVPGNIRRAEHFLHVLRRLVQYL-RGRLETENVEKEGP 352
A +S AL P DI +EA+PG++R+A HFL ++RLV + R P
Sbjct: 306 SGESTAGVSVQALNIPQDIAEEAIPGSLRQANHFLAFMQRLVDFTHRVVCRISRTYVADP 365
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR- 410
++F+ + +D + LR+ ERL L+ TL+IT F ++ I F TL YT
Sbjct: 366 LTFLTKVKEECSVDVRHLRYLTERLKVLLNTLQITSAHSFHNVSLIAQMFMTLSTHYTDD 425
Query: 411 -----GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
GF ++ E D P IPDPV++L C DASLA++ VF +++SV++TSGTLSP+D+Y
Sbjct: 426 RYEKPGFVVVCEASDPTRPTIPDPVIRLVCVDASLALREVFAKYRSVILTSGTLSPLDIY 485
Query: 466 PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-----PVSTKFDMRSDP----GVAR 516
P++L F PV+++SF+M+L+R CI P+V+TR S+ + V++ F +R +P V+
Sbjct: 486 PKMLGFSPVIAKSFQMTLSRKCIAPVVVTRSSESVNITAEEVTSSFVVRKNPEAQATVSA 545
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
Y LL + VPDGIVCFF Y YM E++ W+ SG LKE+ +HKL+F+ETQ V +T
Sbjct: 546 AYEDLLRGLAKTVPDGIVCFFTGYQYMSEVLLGWHRSGFLKELSRHKLIFVETQSVDDTA 605
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
AL++YR+ACD GRGA+F S+ARGK+AEGIDFD HYGR V+MFGVPF + + L R+
Sbjct: 606 TALESYRRACDIGRGAIFMSIARGKIAEGIDFDSHYGRAVVMFGVPFLPPIDEPLRQRIH 665
Query: 637 YLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIL 696
++ I ++ FDA+RQA+QC+GRV+R+K DYGMM+ D+R++ +DKR KLP WI
Sbjct: 666 WMEICLGIPGSEYRNFDAMRQASQCIGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWIQ 725
Query: 697 SHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
L++ + NLS D A+ +AR F ++MAQP++ +G TL S L +
Sbjct: 726 QCLKE-NTNLSVDAAVAVARGFFKEMAQPWEYKRDLG-TTLFSVETLAR 772
>gi|157870391|ref|XP_001683746.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
gi|68126812|emb|CAJ05417.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
Length = 813
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/772 (41%), Positives = 492/772 (63%), Gaps = 43/772 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +EDV V FPY+ IYPEQ Y+ ELKR LD GH +LEMP+GTGKTI+LLS++ +Y+
Sbjct: 1 MKLYVEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTR--HLGPAAKILAIGLSSRKNLCV 117
K++YCTRTV EM KT+ E+ KLL +++ L P + + LS++KNLC+
Sbjct: 61 HHHAHEKRKVVYCTRTVEEMVKTMGEMRKLLKHWEAEGEQLRP---LRGLCLSAKKNLCI 117
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+ V + + D VDA CR TA W + C +++ +A LPPGV++L
Sbjct: 118 ETSVASRIHPDEVDAGCRSITAPWQQE--------RRCGYYDTLAQAPLE--LPPGVHSL 167
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
DL+ FG+Q CPY+L R + +++V+SY Y++DP V+ + + + + ++VV DE H
Sbjct: 168 DDLKDFGEQHHVCPYYLVRKALPIVDIIVHSYLYMVDPVVSEVTKEFLNENTIVVMDEGH 227
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--- 294
N+D+VCIEA+S+ + ++ A N+ +N+E++ KAT+ +L+ EY+RLV GLA+
Sbjct: 228 NVDDVCIEAMSLILTKKDSLDAKENMKDLNKELDHLKATNRQQLQNEYDRLVNGLAMAEM 287
Query: 295 -RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY---LRGRLETENVEKE 350
R A + PA+P+++ + A+P ++R+A HFL ++RLV + + R+ V
Sbjct: 288 ARDPEQRALVEAPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIVARITRTYVAD- 346
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY-- 408
P++F+ + ++ R+ RL L+ TL+I + ++ + I TL+ +
Sbjct: 347 -PLTFLTKLKEECALEISHFRYLSGRLKVLLTTLQIANAGKYRPVALIAQMYTLLSMHYT 405
Query: 409 -----TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
GF ++ E FD P IPDPV++ C DASLA++ F R +SV++TSGTLSP+D
Sbjct: 406 DDRYEKPGFVVVCEAFDPTRPQIPDPVIRTVCVDASLALRDTFARHRSVILTSGTLSPMD 465
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-----PVSTKFDMRSDPG----V 514
+YP++L F P +S+SF+M+L+R CI P+++TR S+ + V++ F +R++P V
Sbjct: 466 IYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVNITAEEVTSSFKVRTNPTAQALV 525
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
Y LL+E+ VPDG+VCFF Y YM E++ W+ SG L+++ +HKL+F+ETQ V E
Sbjct: 526 TSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLAWHSSGFLQKLAKHKLIFVETQGVEE 585
Query: 575 TTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
T++AL NYR+ACD GRGA+F S+ARGK+AEGIDFDRHYGR V+MFGVPF + L R
Sbjct: 586 TSVALANYRRACDIGRGAIFMSIARGKIAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQR 645
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
+ ++ I E +F FDA+RQA+QC+GRV+R+K DYGMM+ DKR++ +DK K+P W
Sbjct: 646 MHWMEVCLGISESEFRNFDAMRQASQCIGRVLRNKTDYGMMLLVDKRFALNDKVKKIPRW 705
Query: 695 ILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
I L++ + NLS D A+ +AR F ++MAQP++ +G TLLS+ L +M
Sbjct: 706 IAQCLKN-NTNLSVDAAVAVARGFFKEMAQPWEHEKDLG-TTLLSKETLRRM 755
>gi|340055622|emb|CCC49943.1| TFIIH basal transcription factor, private [Trypanosoma vivax Y486]
Length = 889
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 338/758 (44%), Positives = 485/758 (63%), Gaps = 38/758 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +EDV V FPY+ IYPEQ YM ELK+ LD GH +LEMP+GTGKT LLSL+ +Y+
Sbjct: 87 MKFFIEDVPVLFPYEYIYPEQLEYMTELKKGLDRGGHMVLEMPSGTGKTTTLLSLLLAYL 146
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKIL-AIGLSSRKNLCVN 118
K++YCTRTV E+ KTL EL KLL +++ G ++ L + L+++KNLC+
Sbjct: 147 NHHASERRKVVYCTRTVEEVVKTLGELRKLLRLWESE--GTLSRPLHGVCLTAKKNLCIE 204
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V+ D VDA CR A W + + C +F+ + A LPPG Y++
Sbjct: 205 PSVVNRRGLDEVDAGCRSLIAPWQTS--------QRCSYFDTLDSAEFE--LPPGAYSVD 254
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DL+ FG+ CPY+LAR ++ A++VV+S+ Y++DP VA + + + + ++VV DE HN
Sbjct: 255 DLKQFGETHHVCPYYLARKALKAADIVVHSFLYIVDPIVAEVTKEYLNENTIVVMDEGHN 314
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
+D+VCIEA+S+ + + A +L ++N+ ++ KAT+ RL+ EY+RLV GLA+
Sbjct: 315 VDDVCIEAMSLIITKDDAVQAKESLKQLNRAVDYIKATNRQRLQDEYDRLVNGLAMAEMA 374
Query: 299 PN------AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL-RGRLETENVEKEG 351
A + P++P DI +EAVPG +R+A HFL ++RLV + R
Sbjct: 375 RAAEPATFAPVRTPSIPQDIAEEAVPGTLRQANHFLAFMQRLVDFTHRVVCRISRTYVAD 434
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR 410
P++F+ + +D + LR+ ERL +LM TL+IT+T F +I I + TL YT
Sbjct: 435 PLTFLTKVREECSVDLRHLRYLTERLKALMNTLQITNTYGFRNIVLIAQMYMTLATHYTD 494
Query: 411 ------GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
GF ++ E D P +PDPV++L C DASLA++ VF R +SVV+TSGTLSP+D+
Sbjct: 495 DRYERPGFVVVCEAHDPTRPAVPDPVVRLVCVDASLALRDVFSRHRSVVLTSGTLSPLDI 554
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-----PVSTKFDMRSDPG----VA 515
YP++L F PV+S+SF+M+L+R CI P+V+TR S+ + V++ F +R DP V+
Sbjct: 555 YPKILGFSPVISKSFQMTLSRKCIAPVVVTRSSESVNITAEEVTSCFVVRKDPVAQEIVS 614
Query: 516 RNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVET 575
Y LL + VPDGIVCFF Y YM E++ W SG LKE+ QHKL+F+ETQ V ET
Sbjct: 615 SAYEDLLRGLAKTVPDGIVCFFTGYQYMSEVLLGWYKSGFLKELAQHKLIFVETQSVEET 674
Query: 576 TLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARL 635
+LAL NY++ACD GRGAVF ++ARGK+AEGIDFDRHYGR V+MFGVPF L + L R+
Sbjct: 675 SLALANYKRACDIGRGAVFMAIARGKIAEGIDFDRHYGRAVVMFGVPFLPPLDEPLRQRI 734
Query: 636 EYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
++ I ++ FDA+RQA+QC+GRV+R+K DYGMM+ D+R++ +DKR KLP WI
Sbjct: 735 HWMEMCLGIPGNEYRNFDAMRQASQCIGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWI 794
Query: 696 LSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
L++ + NLS D A+ IAR F ++MAQP++ +G
Sbjct: 795 QQCLKE-NTNLSVDAAIAIARGFFKEMAQPWEHKRDLG 831
>gi|340506361|gb|EGR32513.1| tfiih basal transcription factor complex helicase subunit, putative
[Ichthyophthirius multifiliis]
Length = 809
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 320/763 (41%), Positives = 498/763 (65%), Gaps = 10/763 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F + D+ VYFPY ++Y EQ YM +LK LD +GH ++EMPTGTGKT+ LLSLI+SY+
Sbjct: 1 MKFYINDLPVYFPYQSLYKEQLEYMKDLKLILDNQGHGIIEMPTGTGKTVCLLSLISSYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA---KILAIGLSSRKNLCV 117
L KL+YCTRTV EMEKT+ ELK + +++ K L LS+R NLC+
Sbjct: 61 LQNQGKFKKLLYCTRTVVEMEKTIEELKFVLENTKKYILEEKREFKFLCTALSARSNLCI 120
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
N V + ++ +D C K TA WVR E + C FFEN+E+ G+Y +
Sbjct: 121 NPLVQNQQKKEKIDDECLKLTAKWVR-FRGEKGEQKLCTFFENFEEKKEEIEFKEGIYNI 179
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
DL+ GKQ+ CPYFLAR +V +N+VVY+Y YLL P++ II+K +QK+ +VVFDEAH
Sbjct: 180 DDLKEIGKQKNICPYFLARKLVNDSNIVVYNYMYLLSPQMKDIINKSLQKDCIVVFDEAH 239
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
NIDN+C++ +V++ ++ L+ A +N+ ++ +I+ K L EY +L+ GL +
Sbjct: 240 NIDNICLDVFTVNINKRLLDSAYKNVEQLELKIDNMKNQSQQSLENEYKQLLNGLKKKIL 299
Query: 298 LP--NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
L N +L + ++ K+++P IR A+ F+ L++++ +L+ +L+ +N + P F
Sbjct: 300 LQKNNFYLLIKGVFEELAKQSIPLQIRLAKPFVLFLKKILMFLKNKLKEKNCINQDPPQF 359
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
++ + IDQ +L+F ERL L ++LEITD DE++ I TI F+TL+ RGF II
Sbjct: 360 LSDMQIQNHIDQTSLKFAEERLSQLFMSLEITDNDEYVAITTIAQFSTLLAMNQRGFKII 419
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+P + DP+L +C D+SLA++ VF + SV++TSGT+SP+D+YP++LNF+P +
Sbjct: 420 FQP-SPLDGSLSDPLLTFTCLDSSLAIQNVFKEYASVILTSGTMSPLDIYPKILNFNPFM 478
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+S + L+R+ I P+++T+G D +S++F+ R + V R++G LL+++ I PDGIV
Sbjct: 479 LKSIDIELSRNSINPIIVTKGLDFTALSSEFEARQNMTVTRSFGALLIDISKICPDGIVA 538
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM++II W+ GIL E+ ++KLV+ E++DV +T+ +L ++R+ACD GRGA+FF
Sbjct: 539 FFPSYRYMEQIIFEWDQDGILDELRKYKLVYFESKDVAQTSQSLFHFRRACDYGRGAIFF 598
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
S+ARGKVAEGIDF+ YGR VIM G P Q + ILL R++YL + F++ + +++ FDA+
Sbjct: 599 SIARGKVAEGIDFNEQYGRCVIMLGFPVQNSNDPILLERVKYLTENFKVTKNEYIEFDAM 658
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
RQ AQC+GRV+R K DYG+MI A+KR++R + KLP WI ++D ++++S+++ IA
Sbjct: 659 RQCAQCLGRVMRGKNDYGLMIMAEKRFARSLVKKKLPEWIKKQIKDYNVDISSEVVSAIA 718
Query: 716 REFLRKMAQPY--DKAGSIGRKTLLSQADLEKMTNDGSINEML 756
F ++M Q + + ++ LL D+ ++ SI+E L
Sbjct: 719 VNFFKEMGQEFIMNDKSFFNQQQLLEMQDILQIKQ-SSIDENL 760
>gi|71994598|ref|NP_497182.2| Protein Y50D7A.2 [Caenorhabditis elegans]
gi|351059416|emb|CCD73788.1| Protein Y50D7A.2 [Caenorhabditis elegans]
Length = 606
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/558 (52%), Positives = 404/558 (72%), Gaps = 6/558 (1%)
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DLR+ G+++ CPYF AR + A++VVYSY Y+LDPK+A ++SK+ ++SVVVFDEAH
Sbjct: 27 EDLRSLGREKKICPYFTARQAINRAHIVVYSYHYILDPKIAELVSKDFSRKSVVVFDEAH 86
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALR 295
NIDNVCIE++SV++ ++ + A + L + + R K++++ +L++EY++LVEGL R
Sbjct: 87 NIDNVCIESMSVAISQKNADRALQELQSLEGVVNRMKSSNSEKLQSEYDKLVEGLKRTER 146
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+ L+NP LP IL EAVPGNIR+A HFL L+R V+Y+R RL T V E P +F
Sbjct: 147 ERANDERLANPVLPDQILHEAVPGNIRQANHFLLFLKRFVEYIRHRLRTHQVLIESPAAF 206
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
+ I I++K +RFC ERL +L+ TLEITD + + + TLV TY++GFS+I
Sbjct: 207 MKDILDRMCIERKPMRFCAERLSNLVKTLEITDNGDVWALSQVTTLCTLVSTYSKGFSVI 266
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+EP D V+ LSCHDAS+A++PV RFQSV+ITSGTLSP+++YP++L+F P V
Sbjct: 267 VEPQDGSQL----AVITLSCHDASIAIRPVMSRFQSVIITSGTLSPLEMYPKVLDFDPSV 322
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
SF M+L R C+ P+V+ RG+DQ+ ++++F+ R+D V RNYG L++EM S+VPDG+V
Sbjct: 323 IASFTMTLARPCLSPLVVARGNDQVAMTSRFEQRADVAVIRNYGNLVLEMASLVPDGMVV 382
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY YM+ +I W + I+ E+M++KL+FIET D +ET+ AL+ Y +ACD GRGAV F
Sbjct: 383 FFTSYLYMENVIGVWYEQHIIDELMKYKLLFIETNDALETSAALEKYVEACDSGRGAVLF 442
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 655
SVARGKV+EGIDF H GR VIM G+P+ YT S++L ARLEYLRD F IKE DFLTFDA+
Sbjct: 443 SVARGKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEYLRDQFGIKENDFLTFDAM 502
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R AQC+GR +RSK DYG+M+FADKR+SR+DKR KLP W+ +L A NLS D A +A
Sbjct: 503 RHTAQCMGRALRSKTDYGLMVFADKRFSRNDKRGKLPRWMQEYLEPACTNLSIDEAAQVA 562
Query: 716 REFLRKMAQPYDKAGSIG 733
R +L MAQP++K +G
Sbjct: 563 RRWLTLMAQPFEKEHQLG 580
>gi|145498283|ref|XP_001435129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402259|emb|CAK67732.1| unnamed protein product [Paramecium tetraurelia]
Length = 722
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 316/741 (42%), Positives = 469/741 (63%), Gaps = 37/741 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY +Y EQ YM LK+ LD KGH +LEMPTGTGKT++LL+LI +Y+
Sbjct: 1 MKFVIDDLEVIFPYKFLYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLALIIAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+P KLIYCTRTV EMEKTL E++L+ + + G A+GLSSRKNLC+N
Sbjct: 61 AQRPNTVKKLIYCTRTVVEMEKTLEEVRLVLKAR-KAEGLNDNFTAVGLSSRKNLCINPD 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAV--LPPGVYTLQ 178
V+ +D VDA CRKRTA WV+ +N ETC F++NYEK+ + LP VY+L
Sbjct: 120 VI--NQKDRVDAECRKRTAEWVKR--GQN---ETCIFYDNYEKSGKETIANLPHDVYSLN 172
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DLR G CPYF AR MV+ AN+VVY+Y YL+DP V+ ++K+ KESVVVFDEAHN
Sbjct: 173 DLRKNGAYSIQCPYFTAREMVKKANIVVYNYLYLIDPTVSSQLTKDQIKESVVVFDEAHN 232
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
ID+VCIEA +V + + L A NL + +I+ RL EY +L++ L +
Sbjct: 233 IDDVCIEAYTVRLNKPILAEAINNLKVVETQIQSETNEIQNRLNEEYKKLIKNLEKK--- 289
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE-------TENVEKEG 351
P L+ + +PG IR+A +F+ ++R++ LR +L+ T +
Sbjct: 290 PEGELN---------QLVIPGQIRKARNFIDFMKRVINSLRKKLKDNSEALKTSHAILHN 340
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
F I +D +L+ C ERL+ L+ TL+I +TD+F + ++ F + Y G
Sbjct: 341 TKGFTEEIQKEGNLDIDSLKQCGERLNLLLNTLQIAETDKFRPLSSVAQFVMYLVQYQEG 400
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
F +I + + + + ++ L+C D+SLA+K +F +FQSV++TSGT+SPI++YP++L+F
Sbjct: 401 FKVIFQS-NNYEGTLNEKLMTLACFDSSLAMKNIFAQFQSVILTSGTMSPIEIYPKILDF 459
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
PVV++S + LTR+ I P+++T D ++++F +R++ V+RNYG L+E+ VPD
Sbjct: 460 KPVVAKSIDIELTRNSIQPIIVTMSEDGTELTSEFTLRNNEDVSRNYGNFLLELSENVPD 519
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
G++ F SYS M+E + WN + ++K++FIE++DV ET+ L YRK CD GRG
Sbjct: 520 GLIVFMPSYSRMEEWASIWN------KFSKNKVLFIESKDVAETSQKLQQYRKCCDVGRG 573
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
A FS+ARGK+AEGIDF+ HYGR V + G P + ++L R ++L + F+I + DF+
Sbjct: 574 AALFSIARGKIAEGIDFEGHYGRCVAVIGFPALNSKDTLILERCKFLEEKFKITKNDFIE 633
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH-LNLSTDM 710
FDA+RQ QC+GRV+R K DYG+MI ADKR+++ K K+P WI L + LN++++
Sbjct: 634 FDAMRQTCQCLGRVLRGKQDYGIMIMADKRFAQKSKLQKMPRWIYKQLDQSRCLNITSET 693
Query: 711 ALHIAREFLRKMAQPYDKAGS 731
A+ + R+F R+MAQP+ A +
Sbjct: 694 AITVVRDFFRQMAQPFKIADN 714
>gi|407860924|gb|EKG07586.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma cruzi]
Length = 780
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 315/742 (42%), Positives = 473/742 (63%), Gaps = 35/742 (4%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELK+ LD GH +LEMP+GTGKT LLSL+ +Y+ + K+IYCTRTV EM KT+
Sbjct: 1 MTELKKGLDQGGHIVLEMPSGTGKTTTLLSLLIAYIHYHADEKRKVIYCTRTVEEMTKTM 60
Query: 85 AEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
EL KLL + T LG + + L+++KNLC+ S V A + VDA CR TA W
Sbjct: 61 GELRKLLELWNTDELGSNRPLRGLCLTAKKNLCIESTVAAQRYPEDVDAGCRSLTAPWQT 120
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+ C +F+N E+ LPPG Y+++DL+ FG+ CPY+L R ++ +
Sbjct: 121 S--------NRCAYFDNLERIPFE--LPPGAYSVEDLKRFGEAHQLCPYYLVRKALRVVD 170
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+VV+S+ Y++DP VA + + ++VV DE HN+D+VCIEA+S+ + ++ A N+
Sbjct: 171 IVVHSFLYIVDPIVAEVTKGYFNENAIVVMDEGHNVDDVCIEAMSLIITKEDAAQAKENV 230
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA-----WLSNPALPSDILKEAVP 318
++N + KAT+ +L+ EY+RLV GLA+ + + P++PS+I +EA+P
Sbjct: 231 KQLNAAADHLKATNRQQLQDEYDRLVNGLAMVEMARSVDSMMMTVQAPSIPSEIAEEAIP 290
Query: 319 GNIRRAEHFLHVLRRLVQYL-RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL 377
G++R+A HFL ++RLV + R P++F++ + +D + R+ ERL
Sbjct: 291 GSLRQANHFLSFIQRLVDFTHRVVCRISRTYVADPLTFLSKVRDECAVDIRHFRYLTERL 350
Query: 378 HSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR------GFSIIIEPFDERMPHIPDPV 430
LM TL+IT++ +F ++ I + TL YT GF ++ E D P +PDPV
Sbjct: 351 KVLMNTLQITNSHKFRNVSLIAQMYMTLSTHYTDDRYEKPGFVVVCEAHDPTRPAVPDPV 410
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP 490
++L C DASLA++ F +++SVV+TSGTLSP+D+YP++L F PV+++SF+M+L+R CI P
Sbjct: 411 IRLVCVDASLALREAFSKYRSVVLTSGTLSPLDIYPKILGFTPVIAKSFQMTLSRKCIAP 470
Query: 491 MVLTRGSDQL-----PVSTKFDMRSDP----GVARNYGKLLVEMVSIVPDGIVCFFVSYS 541
+V+TR ++ + +++ F +R++P V+ Y LL + VPDGIVCFF Y
Sbjct: 471 VVVTRSTESVNITMEEITSSFVVRTNPLAQDIVSSAYEDLLRGLGKTVPDGIVCFFTGYQ 530
Query: 542 YMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGK 601
YM E++ W+ SG LKE+ Q+KL+FIETQ V ET++AL NYR+ACD GRGA+F ++ARGK
Sbjct: 531 YMGEVLLGWHRSGFLKELAQYKLIFIETQSVEETSIALANYRRACDIGRGAIFMAIARGK 590
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQC 661
+AEGIDFDRHYGR V+MFGVPF + L R+ ++ I ++ FDA+RQA+QC
Sbjct: 591 IAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQRIYWMETCLGIPGNEYRNFDAMRQASQC 650
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
+GRV+R+K DYGMM+ D+R++ +DKR KLP WI L++ + NLS D A+ +AR F ++
Sbjct: 651 IGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWIQQCLKE-NTNLSVDAAIAVARGFFKE 709
Query: 722 MAQPYDKAGSIGRKTLLSQADL 743
MAQP++ +G TL S+ L
Sbjct: 710 MAQPWEHKRDLG-TTLFSKETL 730
>gi|407426334|gb|EKF39660.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma cruzi marinkellei]
Length = 780
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/742 (42%), Positives = 469/742 (63%), Gaps = 35/742 (4%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELK+ LD GH +LEMP+GTGKT LLSL+ +Y+ + K+IYCTRTV EM KT+
Sbjct: 1 MTELKKGLDHGGHIVLEMPSGTGKTTTLLSLLIAYIHHHADEKRKVIYCTRTVEEMTKTM 60
Query: 85 AEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
EL KLL + T + + L+++KNLC+ S V + + VDA CR TA W
Sbjct: 61 GELRKLLELWNTDESVSNRPLRGLCLTAKKNLCIESTVASQRYPEDVDAGCRSLTAPWQT 120
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+ C +F+N E LPPG Y+++DL+ FG+ CPY+L R ++ +
Sbjct: 121 S--------NRCAYFDNLE--CIPFELPPGAYSVEDLKQFGESHQLCPYYLVRKALRVVD 170
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+VV+S+ Y++DP VA + + ++VV DE HN+D+VCIEA+S+ + ++ A N+
Sbjct: 171 IVVHSFLYIVDPIVAEVTKGYFNENTIVVMDEGHNVDDVCIEAMSLIITKEDAAQAKENV 230
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA-----WLSNPALPSDILKEAVP 318
++N + KAT+ +L+ EY+RLV GLA+ + + P +PSDI +EA+P
Sbjct: 231 KQLNAAADHLKATNRQQLQDEYDRLVNGLAMVEMARSVDGMMMPVQAPRIPSDIAEEAIP 290
Query: 319 GNIRRAEHFLHVLRRLVQYL-RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL 377
G++R+A HFL ++RLV + R P++F++ + +D + R+ ERL
Sbjct: 291 GSLRQANHFLSFIQRLVDFTHRVVCRISRTYVADPLTFLSKVRDECAVDIRHFRYLTERL 350
Query: 378 HSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR------GFSIIIEPFDERMPHIPDPV 430
LM TL+IT++ +F ++ I + TL YT GF ++ E D P +PDPV
Sbjct: 351 KVLMNTLQITNSHKFRNVALIAQMYMTLSTHYTDDRYEKPGFVVVCEAHDPTRPAVPDPV 410
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP 490
++L C DASLA++ F +++SVV+TSGTLSP+D+YP++L F PV+++SF+M+L+R CI P
Sbjct: 411 IRLVCVDASLALREAFSKYRSVVLTSGTLSPLDIYPKILGFTPVIAKSFQMTLSRKCIAP 470
Query: 491 MVLTRGSDQL-----PVSTKFDMRSDP----GVARNYGKLLVEMVSIVPDGIVCFFVSYS 541
+V+TR ++ + +++ F +R++P V+ Y LL + VPDGIVCFF Y
Sbjct: 471 VVVTRSTESVNITMEEITSSFVVRTNPLAQDIVSAAYEDLLRGLSKTVPDGIVCFFTGYQ 530
Query: 542 YMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGK 601
YM E++ W+ SG LKE+ Q+KL+FIETQ V ET++AL NYR+ACD GRGA+F ++ARGK
Sbjct: 531 YMGEVLLGWHRSGFLKELAQYKLIFIETQSVEETSIALANYRRACDIGRGAIFMAIARGK 590
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQC 661
+AEGIDFDRHYGR V+MFGVPF + L R+ ++ I ++ FDA+RQA+QC
Sbjct: 591 IAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQRIYWMETCLGIPGNEYRNFDAMRQASQC 650
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
+GRV+R+K DYGMM+ D+R++ +DKR KLP WI L++ + NLS D A+ +AR F ++
Sbjct: 651 IGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWIQQCLKE-NTNLSVDAAIAVARGFFKE 709
Query: 722 MAQPYDKAGSIGRKTLLSQADL 743
MAQP++ +G TL S+ L
Sbjct: 710 MAQPWEHKRDLG-TTLFSKETL 730
>gi|156047833|ref|XP_001589884.1| hypothetical protein SS1G_09606 [Sclerotinia sclerotiorum 1980]
gi|154694001|gb|EDN93739.1| hypothetical protein SS1G_09606 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 616
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/685 (45%), Positives = 429/685 (62%), Gaps = 83/685 (12%)
Query: 30 RALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKL 89
R LDA GHC+LEMP+GTGKTI+LLSLI +Y PE+ KLIYC+RT+ E+EK LAELK
Sbjct: 2 RTLDAGGHCVLEMPSGTGKTISLLSLIVAYQQYYPEHR-KLIYCSRTMSEIEKALAELKA 60
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
L Y+ LG +GL+SRKNLC++ V ++ VDA CR TA +V+
Sbjct: 61 LMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKERG 120
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
++ C + EN + ++P GV+TL + +G+ CPYF +R M+ F NV++YSY
Sbjct: 121 EDVPVCVYHENLDLLEPHNLIPNGVWTLDGIMRYGEDHKQCPYFTSRRMMSFCNVIIYSY 180
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YLLDPK+A +SKE+ K+ +VVFDEAHNIDNVCIE+LS + +L ATR + +
Sbjct: 181 HYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITDDSLRKATRGAINLENK 240
Query: 270 IERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
I + +D+ +L+ EY +LVEGL A +A++SNPALP D+LKEAVPGNIRRAEHF
Sbjct: 241 ISDLRDSDSEKLKDEYAKLVEGLRGADEARAEDAFMSNPALPDDLLKEAVPGNIRRAEHF 300
Query: 328 LHVLRRLVQYLRG-RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEI 386
+ L+R ++YL+ R++ V E P SF+A + H I++K LRFC ERL SL+ TLE+
Sbjct: 301 VTFLKRFIEYLKKTRMKVRQVISETPASFLAHLREHTFIEKKPLRFCAERLTSLVRTLEL 360
Query: 387 TDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
T+ +++ +Q + FATLV TY +GF +I+EP++ +P+PVL +C DA++A+KPVF
Sbjct: 361 TNIEDYQPLQEVATFATLVATYEKGFLLILEPYESDTAEVPNPVLHFTCLDAAIAIKPVF 420
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+RF SV+ITSGT+SP+++YP++L+F VV S+ M+L R
Sbjct: 421 ERFSSVIITSGTISPLEMYPKMLDFECVVQESYPMTLAR--------------------- 459
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
G+V FF SY YM+ II T
Sbjct: 460 ------------------------HGMVVFFPSYLYMESIIKT----------------- 478
Query: 567 IETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
YR AC GRGA+ VARGKV+EGIDFD YGR VI GVPFQYT
Sbjct: 479 ---------------YRTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVICIGVPFQYT 523
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
S+IL ARLE+LR+T++I+E DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ +
Sbjct: 524 ESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFLK-- 581
Query: 687 KRSKLPGWILSHLRDAHLNLSTDMA 711
KR++LP WI + D+ +NLSTDMA
Sbjct: 582 KRAQLPKWINQAILDSEVNLSTDMA 606
>gi|71032081|ref|XP_765682.1| DNA repair protein Rad3 [Theileria parva strain Muguga]
gi|68352639|gb|EAN33399.1| DNA repair protein rad3, putative [Theileria parva]
Length = 894
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 309/714 (43%), Positives = 447/714 (62%), Gaps = 84/714 (11%)
Query: 105 LAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR--------------------- 143
LA+GL SR+NLC++ V + +R +D C T+ W R
Sbjct: 167 LAVGLCSRRNLCIHPEVSSHADRTKIDEKCCDLTSVWRRMQFEDLEDKKRNEYTLDYEGS 226
Query: 144 ---------ALAAENPNIET------CEFFENYEKAASAAVLPPGVYTLQDLRAF----- 183
+ E P+IE C ++E E+ + +P GVYTL+ L+ +
Sbjct: 227 RPIRRRPSASAVQEIPDIEEFNSMGLCGYYETMERIWNPTFIPSGVYTLEGLKEYCLKYK 286
Query: 184 ----GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII-----------SKEMQKE 228
G+ CPYF AR + AN+VV +YQYL+DPKV+ + K K+
Sbjct: 287 DSRTGRASPICPYFAARRAIDNANIVVLNYQYLIDPKVSDAVFYHLCTENYLKEKREDKD 346
Query: 229 S------VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
S VVVFDEAHNIDNVCIEALSV + +TL+ A +LSR+ + + D L
Sbjct: 347 SKPKLPIVVVFDEAHNIDNVCIEALSVELSTETLDNAYSDLSRLEDNVRELRLRDQELLL 406
Query: 283 AEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL 342
EY RLVE G++ NP L DI+ A+PG+IR+AEHF+ L+ ++ YL+ +
Sbjct: 407 EEYRRLVETTDF-GSIDIEGYMNPVLRQDIVDRAIPGSIRKAEHFISFLKVVIGYLKKYI 465
Query: 343 ETENVEKEGPVSFVASITAH-----------------AGIDQKTLRFCYERLHSLMLTLE 385
+ + + EGP+ F+ + GI+ + Y R+ SL+ TL+
Sbjct: 466 KVKEAKSEGPLMFLYRFESQCKFKHLHNLHTIKFEHETGINSDVMEHTYNRMKSLLNTLK 525
Query: 386 ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPV 445
+T + + + DF TLVGTY GF +I++PF + + DP+LQ SC DAS+A+K V
Sbjct: 526 MTAVGDLTSLHLVVDFCTLVGTYYNGFIVIVDPFPKATSY--DPLLQFSCLDASIAMKSV 583
Query: 446 FDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTK 505
D FQSV++TSGT+SP++ YP++LNF PV+ +S MSL RDC+CP+++++G++Q+ +STK
Sbjct: 584 IDNFQSVILTSGTISPLEFYPKILNFTPVLMQSLPMSLDRDCLCPIIVSKGANQVHMSTK 643
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLV 565
FD+R+D V RNYG L++++ +PDG+VCFF SY+YM+ I++ W ++GIL IM+HKLV
Sbjct: 644 FDLRTDITVLRNYGSLVIDLCKHIPDGVVCFFPSYAYMELILSHWYETGILASIMEHKLV 703
Query: 566 FIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQY 625
F+ET+D V TTLAL NYR+ACD GRGA+F S+ RGKVAEGIDF+ HYGR VI+ G+PFQY
Sbjct: 704 FMETKDSVTTTLALYNYRRACDVGRGALFLSICRGKVAEGIDFNSHYGRCVILVGIPFQY 763
Query: 626 TLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
TLSK+L ARL+++R + I E +F+TFDA+RQ+AQCVGRVIR+KAD+G+M+FAD RY+R
Sbjct: 764 TLSKVLKARLDFMRCNYGILENEFITFDAIRQSAQCVGRVIRNKADFGLMVFADARYTRI 823
Query: 686 DKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY--DKAGSIGRKTL 737
DK+SKLP WIL ++ ++L L+T+ A+ +A+ F R M+Q Y K +G++ L
Sbjct: 824 DKKSKLPPWILKNMDPSNLFLTTETAVSVAKAFFRNMSQEYVPSKHTRMGQEIL 877
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F ++ + V+FPY IYPEQ +YM LK ALD+KGH +LEMPTGTGKT+AL S ++SY L+
Sbjct: 4 FWIDGIEVFFPYPKIYPEQIAYMKSLKTALDSKGHAVLEMPTGTGKTVALFSFVSSYQLA 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG 99
+PE KL+YCTRT+HEMEK L EL + +Y+ L
Sbjct: 64 RPELG-KLVYCTRTIHEMEKALLELSEVISYRNSQLN 99
>gi|145495232|ref|XP_001433609.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400728|emb|CAK66212.1| unnamed protein product [Paramecium tetraurelia]
Length = 702
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 307/734 (41%), Positives = 457/734 (62%), Gaps = 43/734 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY +Y EQ YM LK+ LD KGH +LEMPTGTGKT++LL+ I +Y+
Sbjct: 1 MKFIIDDIEVIFPYKFLYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLAFILAYL 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+P KLIYCTRTV EMEKTL E++L+ + G A+GLSSR+NLC+N
Sbjct: 61 AQRPNTIKKLIYCTRTVVEMEKTLEEVRLVMKARKAE-GLNDNFTAVGLSSRRNLCINPD 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAAS--AAVLPPGVYTLQ 178
V+ +D VD+ CRKRTA WV+ +E C F++N+EK+A A LP VY+L
Sbjct: 120 VV--NQKDRVDSECRKRTAEWVKRGQSE-----ICIFYDNFEKSAKDFIANLPNDVYSLS 172
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DLR G CPY+ AR MV+ AN+VVY+Y YL+DP ++ ++SK+ KESVVVFDEAHN
Sbjct: 173 DLRKNGGFSMQCPYYTAREMVKKANIVVYNYLYLIDPGISSLLSKDYIKESVVVFDEAHN 232
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
ID+VCIEA +V + + L A NL + +I+ RL EY +L++ L +
Sbjct: 233 IDDVCIEAYTVRLNKPILAEAINNLKVVETQIQSETNEIQNRLNEEYKKLIKNLEKK--- 289
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
P L+ + +PG IR+A +F+ ++R++Q + L + P + +
Sbjct: 290 PEGELN---------QLVIPGQIRKARNFIDFMKRIIQKHQKHLMLFYI---IPKALLKR 337
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+D +L+ C ERL+ L+ TL+I +TD+F + T+ F +
Sbjct: 338 YKRKGNLDIDSLKQCGERLNLLLNTLQIAETDKFRPLSTVAQFVIRI------------- 384
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+ + ++ L+C D+SLA+K +F FQSV++TSGT+SPID+YP++L+F PVV++S
Sbjct: 385 ----QRTLNEKLMTLACFDSSLAMKNIFASFQSVILTSGTMSPIDIYPKILDFKPVVAKS 440
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ LTR+ I P+++T D ++++F R++ V+RNYG L+E+ VPDG++ F
Sbjct: 441 IDIELTRNSIQPIIVTMSEDGTELTSEFTFRNNEDVSRNYGNFLLELSENVPDGLIVFMP 500
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SYS M+E W L++I ++K++ IE++DV ET+ L YRK CD GRGA FS+A
Sbjct: 501 SYSRMEEWARQWQKDKYLEQISKNKVLLIESKDVNETSQKLQQYRKCCDVGRGAALFSIA 560
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGK+AEGIDF+ HYGR V + G P + ++L R ++L + F+I + DF+ FDA+RQ
Sbjct: 561 RGKIAEGIDFEGHYGRCVAVIGFPALNSKDTLILERCKFLEEKFKITKNDFIEFDAMRQT 620
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH-LNLSTDMALHIARE 717
QC+GRV+R K DYG+MI ADKR+++ K SK+P WI L + LN++++ A+ + R+
Sbjct: 621 CQCLGRVLRGKQDYGIMIMADKRFAQKSKLSKMPRWIYKQLDQSRCLNITSETAITVVRD 680
Query: 718 FLRKMAQPYDKAGS 731
F R+MAQP+ A +
Sbjct: 681 FFRQMAQPFKIADN 694
>gi|299470447|emb|CBN78439.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 824
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 268/420 (63%), Positives = 344/420 (81%)
Query: 308 LPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQ 367
LP+DIL+EAVPGNIRRAEHF+ +R++V++ + R+ ++VE E P++FV + +++
Sbjct: 353 LPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALER 412
Query: 368 KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIP 427
K L+F Y RL+SL+ TLE+T D+F + + DFATLVGTYT GF+++IEP +P +
Sbjct: 413 KPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVY 472
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC 487
+PV++L+C DASLA++PVF+RF SVVITSGTLSP+DLYP+LL F PVV + MS R C
Sbjct: 473 EPVMRLACLDASLAIRPVFERFASVVITSGTLSPLDLYPKLLGFSPVVRTALSMSTVRKC 532
Query: 488 ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
ICP+V+TRGSDQLP+STKFD R DP V RNYG L++E+ +IVPDG+VCFF SYSYM+ I+
Sbjct: 533 ICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALMIELAAIVPDGVVCFFTSYSYMEMIV 592
Query: 548 ATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGID 607
+ W++ G+LK +++ KL+FIET+DVVETTLALDN+++ACDCGRGA+F SVARGKVAEGID
Sbjct: 593 SKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAIFLSVARGKVAEGID 652
Query: 608 FDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIR 667
FDRHYGR V+MFGVPFQYTLS +L ARLEYLR TFQI+EGDFLTFDA+RQ AQC+GRVIR
Sbjct: 653 FDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRSTFQIREGDFLTFDAIRQCAQCIGRVIR 712
Query: 668 SKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYD 727
SK DYG++I AD RY+RHDKRSKLPGW+L L + HLN+S D A +AR FL+ MAQP D
Sbjct: 713 SKTDYGLVILADSRYNRHDKRSKLPGWVLQFLDETHLNMSADNAAAMARMFLKDMAQPLD 772
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 2/297 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M L+ + V+FPYD +YPEQY YMLELKR+LDAKGHCLLEMPTGTGKT+ L+SLITSY
Sbjct: 1 MRLDLDGLDVFFPYDFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA-KILAIGLSSRKNLCVNS 119
+ PE KLIYCTRTV EM K + ELK + Y+ LGP K+LA+ LSSR+NLC++
Sbjct: 61 FAHPEVG-KLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKVLALCLSSRRNLCIHE 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
RV+ +R++VD ACR TASWVR A E CEFFE Y S A +P G+Y+L D
Sbjct: 120 RVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDD 179
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L+ FGK++GWCPYFLARH++ ANV+VY+YQY+LDPKVAG++S+E++ ESVVVFDEAHNI
Sbjct: 180 LKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNI 239
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
DNVC EALSV + +++L+ A+R L +I+ ++ K TD RL AEY RLV GLA G
Sbjct: 240 DNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSG 296
>gi|387593145|gb|EIJ88169.1| TFIIH helicase [Nematocida parisii ERTm3]
Length = 730
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 299/749 (39%), Positives = 459/749 (61%), Gaps = 55/749 (7%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MI K+ ++ V+FP + IYPEQ Y+ EL + AKGHCL+EMPTGTGKTI LLS + SY
Sbjct: 1 MIIKMGNIEVFFPKNKIYPEQMQYIKELHEVVQAKGHCLIEMPTGTGKTIVLLSFLVSYQ 60
Query: 61 L-----------------SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK 103
+ + E K++YCTRT E+EK L ELK L+ Y ++ P +
Sbjct: 61 IHLMTKEEGYERIQKNGFKRKEGIFKIVYCTRTTAEIEKVLEELKELYEYIKTYI-PDIE 119
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEK 163
+GL++R+ LC+N + A + V+ CR+ E C F++ Y K
Sbjct: 120 YTGLGLAARRTLCLNPDINAVSSL--VNRRCRQEK--------------EECSFYKEYLK 163
Query: 164 AASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
A +P GVYTL DL+ G ++G C Y+ AR + A+ +VY+Y Y++DP++ ++S
Sbjct: 164 TAEG--MPSGVYTLDDLKEIGNKKGTCAYYTARSSIFLADCIVYTYNYMIDPRINDLVSS 221
Query: 224 EMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI--ERFKATDAGRL 281
+ VVVFDEAHNID+VC+E L+V + R L+ A ++LS I++ + + +
Sbjct: 222 GLGSNCVVVFDEAHNIDSVCVEVLTVHINRACLDKAWKSLSDISEYSVSKSLSLNNRNKE 281
Query: 282 RAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
+ YN+ G +R + + + + S VPG +R F+ +R++++ + +
Sbjct: 282 KTAYNK---GKGIRSDFSSLLEGHKS--SRKFTSLVPGTLRSINGFISAAKRIIEFFKTK 336
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITD-TDEFLHIQTICD 400
L+ N+ E F+ ++ +D ++ RL +M LE+ +++ + +CD
Sbjct: 337 LKNVNLTTETTDVFIKNLENTVYVDFSSIVHLSRRLREIMGELEMHGFIEDYSELSRVCD 396
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
F +L G + +GFS++ EPF+ + +PVL LSC D+S+A+K VF + +V+ITSGTLS
Sbjct: 397 FCSLCGQFKKGFSVVFEPFNSY--SVYEPVLHLSCLDSSIAMKHVFSGYNNVIITSGTLS 454
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL--------PVSTKFDMRSDP 512
PI +YPRLL+F P+ S +S R + +++T+GSDQ+ +S+ F +R++P
Sbjct: 455 PISIYPRLLDFTPIKSVEIDVSSKRG-LHALIVTKGSDQMTLAMDGSNALSSTFSLRAEP 513
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
V RNYG LL+EM VPDG+VCFF SY YM+E +A W +SGI+K+IM+ KL+F+E+ +
Sbjct: 514 AVVRNYGNLLLEMSMSVPDGLVCFFPSYKYMEEAVAAWTESGIIKKIMECKLIFVESFEH 573
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
ET ALD Y++AC+ GRG + SVARGKV+EG+DF YGR V++FGVPFQYT S L
Sbjct: 574 AETERALDGYKRACETGRGGLMLSVARGKVSEGVDFSGCYGRAVLVFGVPFQYTESPRLK 633
Query: 633 ARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
RLE+L + F I+E +FL+FDA+RQ AQCVGRV+R+ DYG+ + AD+R++ +K+++LP
Sbjct: 634 KRLEFLAEEFGIRESEFLSFDAMRQTAQCVGRVLRTSTDYGLAVLADRRFNVPEKKTQLP 693
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRK 721
WI HL + +NLS DM++ AR+F R+
Sbjct: 694 RWIQRHLEETSVNLSIDMSITQARQFFRR 722
>gi|387596142|gb|EIJ93764.1| TFIIH helicase [Nematocida parisii ERTm1]
Length = 730
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 298/749 (39%), Positives = 458/749 (61%), Gaps = 55/749 (7%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MI K+ ++ V+FP + IYPEQ Y+ EL + AKG CL+EMPTGTGKTI LLS + SY
Sbjct: 1 MIIKMGNIEVFFPKNKIYPEQMQYIKELHEVVQAKGQCLIEMPTGTGKTIVLLSFLVSYQ 60
Query: 61 L-----------------SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK 103
+ + E K++YCTRT E+EK L ELK L+ Y ++ P +
Sbjct: 61 IHLMTKEEGYERIQKNGFKRKEGIFKIVYCTRTTAEIEKVLEELKELYEYIKTYI-PDIE 119
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEK 163
+GL++R+ LC+N + A + V+ CR+ E C F++ Y K
Sbjct: 120 YTGLGLAARRTLCLNPDINAVSSL--VNRRCRQEK--------------EECSFYKEYLK 163
Query: 164 AASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
A +P GVYTL DL+ G ++G C Y+ AR + A+ +VY+Y Y++DP++ ++S
Sbjct: 164 TAEG--MPSGVYTLDDLKEIGNKKGTCAYYTARSSIFLADCIVYTYNYMIDPRINDLVSS 221
Query: 224 EMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI--ERFKATDAGRL 281
+ VVVFDEAHNID+VC+E L+V + R L+ A ++LS I++ + + +
Sbjct: 222 GLGSNCVVVFDEAHNIDSVCVEVLTVHINRACLDKAWKSLSDISEYSVSKSLSLNNRNKE 281
Query: 282 RAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
+ YN+ G +R + + + + S VPG +R F+ +R++++ + +
Sbjct: 282 KTAYNK---GKGIRSDFSSLLEGHKS--SRKFTSLVPGTLRSINGFISAAKRIIEFFKTK 336
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITD-TDEFLHIQTICD 400
L+ N+ E F+ ++ +D ++ RL +M LE+ +++ + +CD
Sbjct: 337 LKNVNLTTETTDVFIKNLENTVYVDFSSIVHLSRRLREIMGELEMHGFIEDYSELSRVCD 396
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
F +L G + +GFS++ EPF+ + +PVL LSC D+S+A+K VF + +V+ITSGTLS
Sbjct: 397 FCSLCGQFKKGFSVVFEPFNSY--SVYEPVLHLSCLDSSIAMKHVFSGYNNVIITSGTLS 454
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL--------PVSTKFDMRSDP 512
PI +YPRLL+F P+ S +S R + +++T+GSDQ+ +S+ F +R++P
Sbjct: 455 PISIYPRLLDFTPIKSVEIDVSSKRG-LHALIVTKGSDQMTLAMDGSNALSSTFSLRAEP 513
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
V RNYG LL+EM VPDG+VCFF SY YM+E +A W +SGI+K+IM+ KL+F+E+ +
Sbjct: 514 AVVRNYGNLLLEMSMSVPDGLVCFFPSYKYMEEAVAAWTESGIIKKIMECKLIFVESFEH 573
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
ET ALD Y++AC+ GRG + SVARGKV+EG+DF YGR V++FGVPFQYT S L
Sbjct: 574 AETERALDGYKRACETGRGGLMLSVARGKVSEGVDFSGCYGRAVLVFGVPFQYTESPRLK 633
Query: 633 ARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
RLE+L + F I+E +FL+FDA+RQ AQCVGRV+R+ DYG+ + AD+R++ +K+++LP
Sbjct: 634 KRLEFLAEEFGIRESEFLSFDAMRQTAQCVGRVLRTSTDYGLAVLADRRFNVPEKKTQLP 693
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRK 721
WI HL + +NLS DM++ AR+F R+
Sbjct: 694 RWIQRHLEETSVNLSIDMSITQARQFFRR 722
>gi|159467054|ref|XP_001691713.1| hypothetical protein CHLREDRAFT_100548 [Chlamydomonas reinhardtii]
gi|158279059|gb|EDP04821.1| predicted protein [Chlamydomonas reinhardtii]
Length = 341
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 266/342 (77%), Positives = 313/342 (91%), Gaps = 2/342 (0%)
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
+ DFATLVGTY +GF+II+EP+DER+P +PDPVLQLSC DASLA++PVF +FQ+VVITSG
Sbjct: 2 VADFATLVGTYAKGFAIIMEPYDERLPQVPDPVLQLSCLDASLAMRPVFSKFQTVVITSG 61
Query: 458 TLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARN 517
TLSPIDLYPR+LNF+PV +SF+M+LTRDC+CP+V+TRG+DQ+P+STKF+MRSDPGV RN
Sbjct: 62 TLSPIDLYPRILNFNPVAIQSFQMTLTRDCLCPVVVTRGADQMPLSTKFEMRSDPGVMRN 121
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTL 577
YG+LLVE+ + VPDGIV FFVSY YMD+II+ W+D GIL+EIMQHKL+FIETQDVVETTL
Sbjct: 122 YGRLLVELAATVPDGIVAFFVSYRYMDQIISKWHDMGILQEIMQHKLIFIETQDVVETTL 181
Query: 578 ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
ALDN+R+ACD GRGAVF SVARGKVAEGIDFDRHYGR V+MFGVP+QYTLS+IL ARLEY
Sbjct: 182 ALDNFRRACDSGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPYQYTLSRILRARLEY 241
Query: 638 LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
LR+TFQIKE D+L FDA+RQAAQCVGRVIRSKADYGMMIFADKRY RHDKR KLP WI
Sbjct: 242 LRETFQIKEADYLAFDAVRQAAQCVGRVIRSKADYGMMIFADKRYQRHDKRDKLPQWITR 301
Query: 698 HLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLS 739
HLR+AH+NLSTDM +H+AREFLR MAQPYD+ G++G K+LLS
Sbjct: 302 HLREAHMNLSTDMMVHVAREFLRTMAQPYDR-GAVG-KSLLS 341
>gi|84999674|ref|XP_954558.1| rad3-like DNA helicase-related [Theileria annulata]
gi|65305556|emb|CAI73881.1| rad3-like DNA helicase-related, putative [Theileria annulata]
Length = 894
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 289/636 (45%), Positives = 411/636 (64%), Gaps = 42/636 (6%)
Query: 136 KRTASWVRALAAENPNIET------CEFFENYEKAASAAVLPPGVYTLQDLRAF------ 183
K +AS V+ E P+IE C ++E E+ + +P GVYTL+ L+ +
Sbjct: 251 KPSASAVQ----EIPDIEEFNSMGLCGYYETIERIWNPTFMPSGVYTLEGLKEYCLNFKD 306
Query: 184 ---GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES----------- 229
G+ CPYF AR + AN+VV +YQYL+DPKV+ + + ES
Sbjct: 307 PRTGRPSPICPYFAARRAIDDANIVVLNYQYLIDPKVSDAVFYHLCTESYLKEKRDDKDS 366
Query: 230 ------VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRA 283
VVVFDEAHNIDNVCIEALSV + +TL+ A +LSR+ + + D L
Sbjct: 367 KPKLPIVVVFDEAHNIDNVCIEALSVELSTETLDNAYSDLSRLENSVRELRLRDEELLLE 426
Query: 284 EYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE 343
EY RLVE G+ NP L DI+ +PG+IR+AEHF+ L+ ++ YL+ ++
Sbjct: 427 EYRRLVETTDF-GSADIEGYMNPLLRQDIVDRVMPGSIRKAEHFISFLKVVIGYLKKYIK 485
Query: 344 TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFAT 403
+ + EGP+ F+ GI + Y R SL+ TL++T + + DF +
Sbjct: 486 VKEPKSEGPLMFLYRFQNETGIISDVFQHTYNRFKSLLNTLKMT-VGNLTALHLVIDFCS 544
Query: 404 LVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
LVGTY +GF II++PF + + DPV+Q SC DAS+A+KPV + FQSV++TSGT+SP++
Sbjct: 545 LVGTYYKGFIIIVDPFPKSAAY--DPVIQFSCLDASVAMKPVLENFQSVILTSGTMSPLE 602
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLV 523
YP++LNF P++++S MSL R+C+CP+++++G +Q+ ++TKFD+R D + RNYG L++
Sbjct: 603 FYPKILNFSPILTQSLPMSLDRECLCPIIVSKGDNQVHMTTKFDLRKDITLLRNYGSLVI 662
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR 583
E+ +PDG+VCFF SY+YM+ I++ W ++GIL IM HKLVFIET++ + T+LAL NYR
Sbjct: 663 ELCKSIPDGVVCFFPSYAYMELILSHWYETGILSSIMSHKLVFIETKESISTSLALHNYR 722
Query: 584 KACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ 643
+ACD GRG +F SV RGKVAEGIDFD HYGR VI+ G+PFQYTLS+ L ARL+++R +
Sbjct: 723 RACDAGRGGLFLSVCRGKVAEGIDFDMHYGRCVILIGIPFQYTLSRTLKARLDFMRCNYG 782
Query: 644 IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
I E +F+TFDA+RQAAQC+GRVIR+K DYG+M+ AD RY+R KRSKLP WIL L +
Sbjct: 783 ILESEFITFDAMRQAAQCIGRVIRNKGDYGLMVLADSRYTRVGKRSKLPVWILKRLDLGN 842
Query: 704 LNLSTDMALHIAREFLRKMAQPY--DKAGSIGRKTL 737
L+ + A I + F+R+M+Q Y K G+ TL
Sbjct: 843 FYLTCESASSIGKAFIRRMSQEYISTKRTKFGQTTL 878
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F +E + VYFPY IYPEQ +YM LK LD+KGH +LEMPTGTGKT+AL S ++SY L+
Sbjct: 4 FWIEGIEVYFPYPKIYPEQIAYMKSLKNVLDSKGHAVLEMPTGTGKTVALFSFVSSYQLA 63
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG 99
KPE KL+YCTRT+HEMEK L EL ++ +Y+ L
Sbjct: 64 KPELG-KLVYCTRTIHEMEKALNELSVVISYRNSQLN 99
>gi|326429202|gb|EGD74772.1| TFIIH basal transcription factor complex helicase XPD subunit
[Salpingoeca sp. ATCC 50818]
Length = 523
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 256/431 (59%), Positives = 333/431 (77%)
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
N +A ++NP LPS +++EAVPGNIR+AEHF+ L+R V+YL+ RL+ +V E P F+
Sbjct: 17 NATDAVMANPVLPSHVVEEAVPGNIRKAEHFVSFLKRFVEYLKKRLDVNHVVNEPPAVFL 76
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
++ A ID+K LRF ERL SL+ TLE+TD D+F + + FATLV TYT GFS+II
Sbjct: 77 DQVSIDAAIDRKPLRFASERLSSLLQTLELTDYDDFSSLMRVATFATLVATYTDGFSLII 136
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPFD+R P I DPVL SC DASLA++PVF+RFQSVVITSGTLSP+++YP++LNF PV
Sbjct: 137 EPFDDRAPTIRDPVLHFSCMDASLAIRPVFERFQSVVITSGTLSPLEMYPKILNFRPVTV 196
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
+F M+L+R + PM++T GSDQ +S++++ R D V RNYG LL++M +VPDGIVCF
Sbjct: 197 CTFDMTLSRTSLLPMIVTCGSDQAKISSRYESREDNSVKRNYGHLLLDMARVVPDGIVCF 256
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
FVSY Y++ ++ TW+D GI+ +I Q KLVF ETQDVVET++ALDNY++AC+ GRGA+ S
Sbjct: 257 FVSYEYLESMVTTWHDQGIMDKIKQKKLVFAETQDVVETSIALDNYQRACENGRGAILLS 316
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD H GR V+MFG+P+ YT S+IL ARLE+L D FQIKEG FLTFDA+R
Sbjct: 317 VARGKVSEGIDFDHHLGRAVLMFGIPYVYTQSRILKARLEFLTDNFQIKEGAFLTFDAMR 376
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQCVGR IR K+DYG+M FAD RY+ DK+ KLP WI ++ H NLSTD A+ +A+
Sbjct: 377 HAAQCVGRAIRGKSDYGIMCFADSRYASEDKKGKLPKWIQKYITPGHTNLSTDDAVKLAK 436
Query: 717 EFLRKMAQPYD 727
FLR+MAQPY+
Sbjct: 437 RFLREMAQPYE 447
>gi|170068974|ref|XP_001869063.1| TFIIH basal transcription factor complex helicase subunit [Culex
quinquefasciatus]
gi|167864971|gb|EDS28354.1| TFIIH basal transcription factor complex helicase subunit [Culex
quinquefasciatus]
Length = 542
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 257/491 (52%), Positives = 350/491 (71%), Gaps = 2/491 (0%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ + VYFPY+ IYPEQY+YMLELKR DAKGHCLLEMP+GTGKT LLSLI +Y++ P
Sbjct: 50 VDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYIMENP 109
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
KLIYC+RTV E+EK +AELK L NY + G I + LSSRKN+C++S V
Sbjct: 110 HIVRKLIYCSRTVPEIEKVIAELKHLMNYYEKQTGVMPNITGLVLSSRKNMCIHSEVSKE 169
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
+ VDA C TAS+VR AA + ++ C++FE ++ LPPGVY++ D++ FG
Sbjct: 170 RDGKIVDAKCYGMTASYVRDRAATDDSVPICQYFEGFQAEGKETTLPPGVYSIDDMKEFG 229
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
+++ WCPYF++R + A+VVVYSY YLLDPK+A ++SKE+ +ESVVV DEAHNIDNVC+
Sbjct: 230 RERNWCPYFMSRFAINQAHVVVYSYHYLLDPKIAEVVSKELARESVVVCDEAHNIDNVCV 289
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAW 302
+++SV + R+ +E +T + + + + K D RL EY RLV+GL A +
Sbjct: 290 DSMSVKINRRLIEKSTTGVHTLEKYVAEMKDDDRRRLNDEYLRLVQGLKDAAMQRETDMV 349
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
L+NPALPS+ILKE VPGNIR A+HFL L+R ++Y++ RL ++V +E P F+ I
Sbjct: 350 LANPALPSEILKEVVPGNIRNADHFLSFLKRFIEYIKSRLRVQHVVQESPAGFLKDIQQK 409
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER 422
I++K LRFC ERL SL+ TLEITD EF + I FATLV +YT+GF+IIIEPFD++
Sbjct: 410 VCIERKPLRFCAERLSSLLRTLEITDLTEFGPLTVITSFATLVSSYTKGFTIIIEPFDDK 469
Query: 423 MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
P + +P++ LSC D+S+A+KP+F RFQSVVITSGTLSP+D+YP++L+F PVV SF M+
Sbjct: 470 TPTVSNPIMHLSCMDSSIAMKPIFQRFQSVVITSGTLSPMDMYPKILDFEPVVMSSFTMT 529
Query: 483 LTRDCICPMVL 493
L R C+ PM+L
Sbjct: 530 LARPCLLPMIL 540
>gi|237843395|ref|XP_002370995.1| excision repair protein rad15, putative [Toxoplasma gondii ME49]
gi|211968659|gb|EEB03855.1| excision repair protein rad15, putative [Toxoplasma gondii ME49]
gi|221502303|gb|EEE28036.1| excision repair protein Rad15, putative [Toxoplasma gondii VEG]
Length = 1065
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/473 (54%), Positives = 352/473 (74%), Gaps = 16/473 (3%)
Query: 267 NQEIERFKATDAG------RLRAEYNRLVE--------GLALRGNLPNAWLSNPALPSD- 311
QE ER +AG R E R+ E G + N L++P LP D
Sbjct: 525 GQETERTDGEEAGGGSACVRPEDEGERIREKRKESRDPGRIVVANETLDLLASPLLPDDA 584
Query: 312 ILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLR 371
+L++AVPG+IR+AEHF+ ++RR+V YL+ ++ ++ EGP+SF+ ID L+
Sbjct: 585 LLEQAVPGSIRKAEHFVALMRRIVSYLKSYIKIYELKSEGPLSFLHMFEKETHIDASLLK 644
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVL 431
F Y+RL SL TL+IT+ + + + + DF TLV TY GF +I +P+ E + + DP+L
Sbjct: 645 FFYDRLKSLFNTLQITEVESYAPLTLVADFCTLVATYCEGFILICDPYPEAV-GLYDPLL 703
Query: 432 QLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM 491
QLSC DASLA++PV RFQS+++TSGT+SP++LYP+LLNF PV++ SF MSL R+CICP+
Sbjct: 704 QLSCLDASLAMQPVLKRFQSLILTSGTISPLELYPKLLNFVPVITESFPMSLDRNCICPL 763
Query: 492 VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
++ RGSDQ+P+++KF+ R D V RNY LL+++ VPDG+VCFF SYSYM+ ++++W
Sbjct: 764 IVARGSDQIPLTSKFEYRHDMNVLRNYSNLLIDLCKHVPDGLVCFFTSYSYMESVLSSWY 823
Query: 552 DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRH 611
SG+L +++ +KL+FIET+DVV TTLAL N+R+AC+CGRGAVFFS+ARGKVAEGIDFDRH
Sbjct: 824 HSGVLAQVLDYKLIFIETKDVVATTLALHNFRRACECGRGAVFFSIARGKVAEGIDFDRH 883
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKAD 671
+GR V++FGVPFQYTLS++L ARL+++R+ +QI + +FLTFDA+RQAAQCVGRVIRSK D
Sbjct: 884 FGRCVVLFGVPFQYTLSRVLKARLDFIREHYQIPDNEFLTFDAMRQAAQCVGRVIRSKND 943
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
YG+MIFAD RYSR DKRSKLP WIL HL +AHL L+T+ A+ +AR FLR M+Q
Sbjct: 944 YGLMIFADARYSRIDKRSKLPPWILKHLDNAHLALNTETAISVARTFLRHMSQ 996
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 105/188 (55%), Gaps = 47/188 (25%)
Query: 155 CEFFENYEKAASAAVLPPGVYTLQDLR-AFG--------KQQGWCPYFLARHMVQFANVV 205
C ++EN ++ + P GVYT+++L+ A G + +CPYFLAR ++ ANVV
Sbjct: 299 CAWYENLDRYFAPQFFPAGVYTIEELKIAAGNWRHPLLHRNLPFCPYFLARRLLHIANVV 358
Query: 206 VYSYQYLLDPKVA-----------------------------------GIIS--KEMQKE 228
V +YQY+LDPKV+ G +S +E+Q E
Sbjct: 359 VLNYQYILDPKVSQAALLTPLPDGMSSSHTTGGQTRSTYSNPYQRRGFGGVSTPEEVQYE 418
Query: 229 -SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNR 287
SVVVFDEAHNIDNVCIEALSV++ R +E A RNLS++ ++IE K DA RLR EY
Sbjct: 419 GSVVVFDEAHNIDNVCIEALSVNINRSVMEAALRNLSQLAEKIEEVKKEDAERLREEYEN 478
Query: 288 LVEGLALR 295
LV G+ R
Sbjct: 479 LVRGIKRR 486
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F++++VTVYFPYD IYPEQY+Y+ LK LDAKGH +LEMPTGTGKT+ALLSL+TSY
Sbjct: 2 VVFQIDEVTVYFPYDFIYPEQYAYIRALKHTLDAKGHAVLEMPTGTGKTVALLSLLTSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILA 106
L+ P K++YCTRTV EMEK L ELK + +Y+ + A + A
Sbjct: 62 LAHPRLG-KILYCTRTVPEMEKALLELKGVIDYRIEEIRKARETKA 106
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA--LAAENP 150
IL +GLS+R+N+C+N V +R+ +D ACR+ TA WVR L + NP
Sbjct: 166 ILGVGLSARRNMCINPAVYNQPDRERIDEACRQLTAPWVRQQHLTSYNP 214
>gi|221481803|gb|EEE20173.1| excision repair protein Rad15, putative [Toxoplasma gondii GT1]
Length = 1065
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/473 (54%), Positives = 352/473 (74%), Gaps = 16/473 (3%)
Query: 267 NQEIERFKATDAG------RLRAEYNRLVE--------GLALRGNLPNAWLSNPALPSD- 311
QE ER +AG R E R+ E G + N L++P LP D
Sbjct: 525 GQETERTDGEEAGGGSACVRPEDEGERVREKRKESRDPGRIVVANETLDLLASPLLPDDA 584
Query: 312 ILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLR 371
+L++AVPG+IR+AEHF+ ++RR+V YL+ ++ ++ EGP+SF+ ID L+
Sbjct: 585 LLEQAVPGSIRKAEHFVALMRRIVSYLKSYIKIYELKSEGPLSFLHMFEKETHIDASLLK 644
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVL 431
F Y+RL SL TL+IT+ + + + + DF TLV TY GF +I +P+ E + + DP+L
Sbjct: 645 FFYDRLKSLFNTLQITEVESYAPLTLVADFCTLVATYCEGFILICDPYPEAV-GLYDPLL 703
Query: 432 QLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM 491
QLSC DASLA++PV RFQS+++TSGT+SP++LYP+LLNF PV++ SF MSL R+CICP+
Sbjct: 704 QLSCLDASLAMQPVLKRFQSLILTSGTISPLELYPKLLNFVPVITESFPMSLDRNCICPL 763
Query: 492 VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
++ RGSDQ+P+++KF+ R D V RNY LL+++ VPDG+VCFF SYSYM+ ++++W
Sbjct: 764 IVARGSDQIPLTSKFEYRHDMNVLRNYSNLLIDLCKHVPDGLVCFFTSYSYMESVLSSWY 823
Query: 552 DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRH 611
SG+L +++ +KL+FIET+DVV TTLAL N+R+AC+CGRGAVFFS+ARGKVAEGIDFDRH
Sbjct: 824 HSGVLAQVLDYKLIFIETKDVVATTLALHNFRRACECGRGAVFFSIARGKVAEGIDFDRH 883
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKAD 671
+GR V++FGVPFQYTLS++L ARL+++R+ +QI + +FLTFDA+RQAAQCVGRVIRSK D
Sbjct: 884 FGRCVVLFGVPFQYTLSRVLKARLDFIREHYQIPDNEFLTFDAMRQAAQCVGRVIRSKND 943
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
YG+MIFAD RYSR DKRSKLP WIL HL +AHL L+T+ A+ +AR FLR M+Q
Sbjct: 944 YGLMIFADARYSRIDKRSKLPPWILKHLDNAHLALNTETAISVARTFLRHMSQ 996
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 105/188 (55%), Gaps = 47/188 (25%)
Query: 155 CEFFENYEKAASAAVLPPGVYTLQDLR-AFG--------KQQGWCPYFLARHMVQFANVV 205
C ++EN ++ + P GVYT+++L+ A G + +CPYFLAR ++ ANVV
Sbjct: 299 CAWYENLDRYFAPQFFPAGVYTIEELKIAAGNWRHPLLHRNLPFCPYFLARRLLHIANVV 358
Query: 206 VYSYQYLLDPKVA-----------------------------------GIIS--KEMQKE 228
V +YQY+LDPKV+ G +S +E+Q E
Sbjct: 359 VLNYQYILDPKVSQAALLTPLPDGMSSSHTTGGQTRSTYSNPYQRRGFGGVSTPEEVQYE 418
Query: 229 -SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNR 287
SVVVFDEAHNIDNVCIEALSV++ R +E A RNLS++ ++IE K DA RLR EY
Sbjct: 419 GSVVVFDEAHNIDNVCIEALSVNINRSVMEAALRNLSQLAEKIEEVKKEDAERLREEYEN 478
Query: 288 LVEGLALR 295
LV G+ R
Sbjct: 479 LVRGIKRR 486
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F++++VTVYFPYD IYPEQY+Y+ LK LDAKGH +LEMPTGTGKT+ALLSL+TSY
Sbjct: 2 VVFQIDEVTVYFPYDFIYPEQYAYIRALKHTLDAKGHAVLEMPTGTGKTVALLSLLTSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILA 106
L+ P K++YCTRTV EMEK L ELK + +Y+ + A + A
Sbjct: 62 LAHPRLG-KILYCTRTVPEMEKALLELKGVIDYRIEEIRKARETKA 106
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA--LAAENP 150
IL +GLS+R+N+C+N V +R+ +D ACR+ TA WVR L + NP
Sbjct: 166 ILGVGLSARRNMCINPAVYNQPDRERIDEACRQLTAPWVRQQHLTSYNP 214
>gi|406700501|gb|EKD03668.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 8904]
Length = 550
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/529 (46%), Positives = 359/529 (67%), Gaps = 53/529 (10%)
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGAT 260
+ +V++YS+ YLLDPKVA +S E+ KE++VVFDEAHNI + L+ + RQ+
Sbjct: 3 YVDVIIYSFHYLLDPKVAEQVSAELSKEAIVVFDEAHNIGELSNADLADT--RQS----A 56
Query: 261 RNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL--PNAWLSNPALPSDILKEAVP 318
R++++I +I+ K +DA +L AEY +LV+GLA + + LSNP L D+++EA+P
Sbjct: 57 RSVAKIGDKIDEIKKSDAEKLNAEYQKLVDGLAAANDRREEDDMLSNPVLSEDMIQEAIP 116
Query: 319 GNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLH 378
GNIR+AEHF+ L+R ++YL+ R+ +V E P SF+A + I+++ L+FC ERL
Sbjct: 117 GNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFMAHLKEITFIEKRPLQFCAERLT 176
Query: 379 SLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDA 438
SL+ TLE+T+ DE +Q I F TLV TY +GF +I+EP++ +P+P+ +C D
Sbjct: 177 SLIRTLELTNLDEHFALQKIASFGTLVATYEKGFLLILEPYETEHATVPNPIFHFTCLDP 236
Query: 439 SLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
SLA+ PVF+RF SV+ITSGT+SP+D+YP++L F PV+ S+ M+LTR+ PMV+TRGSD
Sbjct: 237 SLAMAPVFERFSSVIITSGTISPLDMYPKMLQFQPVIQESYPMTLTRNAFLPMVITRGSD 296
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
Q+P+S++F++R+DP V RN+G +L++M VPDG+V FF SY YM+ I++ W D GIL E
Sbjct: 297 QVPISSRFEVRNDPAVVRNFGSILIDMAKTVPDGVVAFFPSYLYMESIVSAWYDMGILSE 356
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
+ +HKL+F+ET D +ET++AL NYR
Sbjct: 357 VWKHKLLFVETPDAMETSIALKNYR----------------------------------- 381
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
+YT S+IL ARLE+LRD +I+E D+LTFDA+R AAQCVGRV+R K D+G+M+FA
Sbjct: 382 -----EYTESRILKARLEFLRDNHRIRENDYLTFDAMRHAAQCVGRVLRGKTDWGLMVFA 436
Query: 679 DKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYD 727
DK DKR+KLP WI ++ DAH NLSTDMA+ +A++F+R ++QP+D
Sbjct: 437 DK-----DKRAKLPRWINQYITDAHSNLSTDMAVVLAKKFIRNISQPFD 480
>gi|443926997|gb|ELU45534.1| DNA repair helicase RAD3 [Rhizoctonia solani AG-1 IA]
Length = 675
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 299/731 (40%), Positives = 410/731 (56%), Gaps = 142/731 (19%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M +LKR LDA GHC+LEMP+GTGKT++LLSLI SY P KLIYC+RTV E+EK L
Sbjct: 1 MCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQFYPTKR-KLIYCSRTVPEIEKAL 59
Query: 85 AELKLLHNYQ-TRHLGPAAKI-----LAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRT 138
+ELK L Y+ ++ P +I +GL+SRKNLC+N V + VDA CR T
Sbjct: 60 SELKRLMAYRISQAETPEQRIKEEAFTGLGLTSRKNLCLNPEVSKEKKGKVVDARCRDLT 119
Query: 139 ASWVRALAAENP-NIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARH 197
+S +P N C + E A++P G++TL D+ G+++ CPYF R
Sbjct: 120 SSQAVEKGRNDPGNHPLCAWHEGLNDMEEGALIPAGIHTLADISNMGRERTTCPYFTIRR 179
Query: 198 MVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLE 257
M +RR L
Sbjct: 180 M---------------------------------------------------KLRRAVLH 188
Query: 258 GATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN--LPNAWLSNPA-LPSDILK 314
+ L+ + KATDA RL+ EY +LVEGL N + ++NP L L+
Sbjct: 189 DLAKKLTSL------IKATDANRLQEEYEKLVEGLQETENDRAEDVVMANPGVLIVWGLR 242
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLR--F 372
+ G +R++ FL + R + + R+ +V E P+SF+ + I+++ LR F
Sbjct: 243 YTLIG-VRKS--FLMIFLR--KQFQTRMRVLHVVAETPLSFLQHLKDITYIERRPLRRVF 297
Query: 373 CYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG----------------FSIII 416
C ERL SL+ TLE+T DE+ +Q + +FATLV TY +G F +I+
Sbjct: 298 CAERLQSLIRTLELTQIDEYSSLQKVANFATLVSTYEKGKHIQAALELRSSVNLGFLLIL 357
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPF+ +P+P+ +C D SLA+KPVF+RF SVVITS T YP
Sbjct: 358 EPFEGENTTVPNPIFHFTCLDPSLAIKPVFERFSSVVITSET------YP---------- 401
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
M+LTR+C P+V+TRGSDQ+ +S++F++R+DP V RN+G +L+E IVPDG+V F
Sbjct: 402 ----MTLTRNCFLPLVITRGSDQVAISSRFEVRNDPSVVRNFGSILIEYCKIVPDGVVAF 457
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY YM+ I+A W+D ACD GRGAV S
Sbjct: 458 FPSYLYMESIVAAWHD-------------------------------MACDNGRGAVLLS 486
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EGIDFD +YGR VIMFG+P+QYT S+IL ARLEYLRD ++I+E +FL FDA+R
Sbjct: 487 VARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEYLRDAYRIRESEFLGFDAMR 546
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQCVGRV+R K D+G+MIFADKR++R DKRSKLP WI ++ ++ NLSTDMAL ++
Sbjct: 547 NAAQCVGRVLRGKTDWGLMIFADKRFARADKRSKLPRWINQYITESASNLSTDMALVQSK 606
Query: 717 EFLRKMAQPYD 727
F+R ++Q +D
Sbjct: 607 LFMRTISQSHD 617
>gi|331231040|ref|XP_003328184.1| TFIIH basal transcription factor complex helicase subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 576
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 287/666 (43%), Positives = 382/666 (57%), Gaps = 132/666 (19%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ------- 94
MP+GTGKTI+LLSLI +Y L PE KL+YC+RTV E+EK L ELK L Y+
Sbjct: 1 MPSGTGKTISLLSLIVAYQLYYPERR-KLVYCSRTVPEIEKALIELKRLMAYRAAQHRLR 59
Query: 95 ---TRHLGPAAK--ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
T + P + L +GL+SRKNLC++ +V + VDA CR T++W +
Sbjct: 60 AGLTDNSAPTNEDDFLGVGLTSRKNLCIHPQVSREKKGKVVDARCRDLTSAWACEKGRAD 119
Query: 150 P-NIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
P ++ C+F E + ++P GV+TL+++ A+G Q G CPYF R MV
Sbjct: 120 PGSVPLCDFHEKLGELEPGNLIPRGVWTLEEITAYGHQHGICPYFAVRRMV--------- 170
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
A +SKE+ S+VVFDEAHNIDNVCIE+LS+ + + L+ A +++ +++
Sbjct: 171 ---------ATQVSKELLPNSIVVFDEAHNIDNVCIESLSIDLTKGMLDNAGKSIGALDE 221
Query: 269 EIERFKATDAGRLRAEYNRLVEGLALRGNL-----PNAWLSNPALPSDILKEAVPGNIRR 323
+I K TDA +L+ EY RLV GL N A L NP LP D+L+EAVPGNIRR
Sbjct: 222 KIREIKRTDASKLQNEYERLVRGLGQSENTFESEEEAAILGNPVLPEDLLQEAVPGNIRR 281
Query: 324 AEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
AEHF L R V+YL+ V +T ID+K LRFC +RL SL+ T
Sbjct: 282 AEHFTAFLTRFVEYLK---------------HVKDLTY---IDRKPLRFCADRLTSLIRT 323
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LE+TD D++ +Q + FATLV TY +G I PV D L
Sbjct: 324 LELTDLDQYNALQKVASFATLVATYEKG-------------KISGPV----GLDVLLGTN 366
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
P F+ F SV+I G ++P
Sbjct: 367 PFFEGFSSVIIPWGPINP------------------------------------------ 384
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
V RN+G +L+E IVPDGIV FF SY YM+ I+A W+D GILKE+ ++K
Sbjct: 385 ---------SVVRNFGTILIEYCKIVPDGIVAFFPSYLYMESIVAAWHDMGILKEVWKYK 435
Query: 564 LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
L+F+ET D VET++AL+NYR+ACD G+GAV SVARGKV+EGIDFD +YGR VIMFG+P+
Sbjct: 436 LIFVETPDAVETSIALENYRRACDNGKGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPY 495
Query: 624 QYTLSKILLARLEYLRDTF---------QIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
QYT S+IL ARLE+LRD + +++E D+LTFDA+R AAQCVGRV+R K DYG+
Sbjct: 496 QYTESRILKARLEFLRDNYRNNYLLHSIKVRENDYLTFDAMRHAAQCVGRVLRGKTDYGL 555
Query: 675 MIFADK 680
M+FADK
Sbjct: 556 MVFADK 561
>gi|221054960|ref|XP_002258619.1| dna excision-repair helicase [Plasmodium knowlesi strain H]
gi|193808688|emb|CAQ39391.1| dna excision-repair helicase, putative [Plasmodium knowlesi strain
H]
Length = 1017
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 337/443 (76%), Gaps = 6/443 (1%)
Query: 299 PNAWLSNPALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
P +P L DI++ AV PG+IR++EHFL+++R +V YL+ + + EGP+SF+
Sbjct: 557 PTDLHYSPILMEDIVRNAVIPGHIRKSEHFLNLMRIVVMYLKKYVNIYEITSEGPLSFLY 616
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+D +FC++RL S++ +L+I + DE+ + +C+F TL+G+Y +GF II E
Sbjct: 617 KCERETKLDTSFFKFCFDRLKSILNSLQIVNVDEYSALNIVCNFCTLLGSYFQGFIIICE 676
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P+ E I DPV+Q +C D+S+A+K V ++++SVV+TSGT++P++LYP+LLNF V++
Sbjct: 677 PYPE-ATGIYDPVIQFACLDSSIAMKSVINKYKSVVLTSGTITPLELYPKLLNFKTVLTA 735
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF +S R+C+CP+++T+ SD +P+S++F +RSD V +NYG LLVEM +PDGIV +F
Sbjct: 736 SFPISFDRNCVCPLIVTKSSDLVPLSSQFSLRSDITVIKNYGMLLVEMCKTIPDGIVAYF 795
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+E+I++W + GI+ I+++KL+FIET+D+V TT+AL N+++ACD G+GA+F S+
Sbjct: 796 PSYIYMEEVISSWYELGIITSILEYKLIFIETKDIVSTTIALHNFKRACDLGKGAIFLSI 855
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
RGK+AEGIDFD+HYG+ VI+FG+P+QYTLS+IL ARL++L++T+ I+E +FLTFDA+RQ
Sbjct: 856 CRGKIAEGIDFDKHYGKCVILFGIPYQYTLSRILKARLDFLKETYNIQENEFLTFDAMRQ 915
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
A+QCVGR+IR+K DYG+MIFAD RY+R+DK+SKLP WI+ + +++NL+ A++I+R+
Sbjct: 916 ASQCVGRIIRNKKDYGIMIFADIRYARNDKKSKLPPWIIKCMDISNVNLTVSTAVNISRK 975
Query: 718 FLRKMAQPYDKAGSIGRKTLLSQ 740
FL M+Q Y + G +T LSQ
Sbjct: 976 FLLNMSQEYKETG----QTKLSQ 994
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 130/259 (50%), Gaps = 61/259 (23%)
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIET---- 154
P ILAIG+S+R+ +CVN RVL R+ +D CRK TA++VR N I
Sbjct: 167 APPGDILAIGISARRCMCVNERVLEKHEREKIDEECRKLTATFVREKKYINQKINQMGTA 226
Query: 155 -----------------------------------------CEFFENYEKAASAAVLPPG 173
C ++ENY+K + PG
Sbjct: 227 HRDRDRISEFIVKNRQHIDIEDYFDIYNTRNSMEEYSEIGLCGYYENYKKEFLFDFIEPG 286
Query: 174 VYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQYLLDPKVAG--IISK 223
VYT++DL+ K CPYF A+ +++ A V+V +YQY++DPKV+ I +
Sbjct: 287 VYTIEDLKVICKGYKNEKNENIPMCPYFCAKKIIEVAKVIVLNYQYIIDPKVSKSLFIGR 346
Query: 224 EMQ------KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATD 277
+M K+ ++VFDEAHNID+VC+EALSV++ R L AT N+ ++ ++IE K +
Sbjct: 347 DMNNRVNLYKKDIIVFDEAHNIDSVCLEALSVNIDRNILNKATGNIKKLLEKIETSKIMN 406
Query: 278 AGRLRAEYNRLVEGLALRG 296
+LR + R+++ L +G
Sbjct: 407 EEKLREDCRRILQELRAQG 425
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+D+ V+FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFHLDDLEVFFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK 103
K ++ K I+CTRTV EMEK+L ELK + Y+ L A+
Sbjct: 62 YKKNDDG-KFIFCTRTVAEMEKSLIELKKVIQYRVDTLRKRAQ 103
>gi|432108806|gb|ELK33414.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Myotis davidii]
Length = 600
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 225/363 (61%), Positives = 289/363 (79%), Gaps = 1/363 (0%)
Query: 367 QKT-LRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPH 425
QKT LRFC ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEPFD+R P
Sbjct: 208 QKTVLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPT 267
Query: 426 IPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR 485
I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R
Sbjct: 268 ITNPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLAR 327
Query: 486 DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
C+CPM++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+
Sbjct: 328 VCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMES 387
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEG 605
+A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EG
Sbjct: 388 TVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEG 447
Query: 606 IDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRV 665
IDF H+GR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR
Sbjct: 448 IDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRA 507
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP
Sbjct: 508 IRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQP 567
Query: 726 YDK 728
+ +
Sbjct: 568 FHR 570
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 159/281 (56%), Gaps = 62/281 (22%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQ+SYMLELKR LDAKGH +LEMP+GTGKT++L
Sbjct: 3 LNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSL---------- 52
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
L L+ YQ RV
Sbjct: 53 ------------------------LALIMAYQ-------------------------RVT 63
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
VD C TAS+VRA +P++ C F+E ++ LP G+Y L DL+A
Sbjct: 64 PLRFGKDVDGKCHSLTASYVRAQYQRDPSLPHCRFYEEFDIHGRQVPLPAGIYNLDDLKA 123
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNV
Sbjct: 124 VGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNV 183
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRA 283
CI+++SV++ R+TL+ NL + + + RF A RLR+
Sbjct: 184 CIDSMSVNLTRRTLDRCQGNLETLQKTVLRFCAE---RLRS 221
>gi|124507219|ref|XP_001352206.1| DNA excision-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23505236|emb|CAD52016.1| DNA excision-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1056
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 330/432 (76%), Gaps = 2/432 (0%)
Query: 300 NAWLSNPALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
N +P L DI+K V PGNIR++EHFL+++R +V YL+ + ++ EGP+SF+
Sbjct: 597 NDLCYSPLLMEDIIKNVVIPGNIRKSEHFLNLMRIVVVYLKKYINIYDITSEGPLSFLYK 656
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+D ++C++RL SL+ L+I + +++ + +C+F TL+G Y +GF II EP
Sbjct: 657 FEKDTKLDTSFFKYCFDRLKSLLNNLQIVNIEDYSSLNIVCNFCTLLGNYFKGFIIICEP 716
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+ E I DP++Q +C D+S+A+K V ++++S+++TSGT++P++LYP+LLNF V++ S
Sbjct: 717 YPE-ATGIYDPLIQFACLDSSIAMKTVINKYKSIILTSGTITPLELYPKLLNFKTVLTAS 775
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F MS R+C+CP+++T+GSD +P+S++F +R+D V +NYG LLV+M +PDGIV +F
Sbjct: 776 FPMSFDRNCVCPLIVTKGSDLIPLSSQFSLRNDLSVIKNYGILLVDMCKCIPDGIVAYFP 835
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+++I++W + G++ I+++KL+FIET+D+V TT+AL N++KACD G+GAVF S+
Sbjct: 836 SYIYMEQVISSWYELGVIANILEYKLIFIETKDIVSTTIALHNFKKACDLGKGAVFLSIC 895
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGK+AEGIDFD+HYG+ VI+FG+P+QYTLSKIL +RL++L++T+ I+E +FLTFDA+RQA
Sbjct: 896 RGKIAEGIDFDKHYGKCVILFGIPYQYTLSKILKSRLDFLKETYNIQENEFLTFDAMRQA 955
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QCVGR+IR+K DYG+MIF+D RY++HDK++KLP WI+ + +++NL+ A+ I+++F
Sbjct: 956 SQCVGRIIRNKKDYGIMIFSDIRYAKHDKKNKLPPWIIKCMDISNINLTVTTAVDISKQF 1015
Query: 719 LRKMAQPYDKAG 730
L M+Q Y + G
Sbjct: 1016 LLNMSQEYRETG 1027
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 148/285 (51%), Gaps = 61/285 (21%)
Query: 91 HNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN- 149
H + G ++ILAIG+S+R+ +C+N +VL R+ +D CRK TA+++R N
Sbjct: 163 HINNLKEFGENSEILAIGISARRCMCINDKVLLKHEREKIDEECRKLTATFIREKKYINN 222
Query: 150 --------PNIET-----------------------------------CEFFENYEKAAS 166
PN++ C ++ENY+K
Sbjct: 223 KIDNEIYHPNVDKISDFILRNRHHLDIEDYFDIYNSRNSLEEYDNIGLCGYYENYKKEFL 282
Query: 167 AAVLPPGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQYLLDPKVA 218
++ PGVYT++DL+ K CPYF A+ +++ + V++ +YQY++DPKV+
Sbjct: 283 YDLIKPGVYTIEDLKVLCKNYKNKENVNVPICPYFCAKKIIEISKVIILNYQYVIDPKVS 342
Query: 219 GIIS--KEMQKE-------SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
+ K+M K ++VFDEAHNID+VC+EALSV++ R L A+ N++++ ++
Sbjct: 343 KALFSWKDMNKNVHLKNKNDIIVFDEAHNIDSVCLEALSVNIDRNILNKASMNITKLMKK 402
Query: 270 IERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILK 314
IE+ K + +L+ E N+++E + L+ + ++N + D +K
Sbjct: 403 IEQSKMLNEQKLKEECNKILEKIKLQKCNQSLNVTNNVINIDNMK 447
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+DV ++FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFNLDDVEIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ 94
K + K I+CTRTV EMEK+L ELK + Y+
Sbjct: 62 YHKKDEG-KFIFCTRTVAEMEKSLIELKKVIQYR 94
>gi|441656294|ref|XP_004091106.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Nomascus leucogenys]
Length = 546
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 224/366 (61%), Positives = 289/366 (78%)
Query: 371 RFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPV 430
RFC ERL SL+ TLEITD +F + + +FATLV TY +GF+IIIEPFD+R P I +P+
Sbjct: 156 RFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPI 215
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP 490
L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CP
Sbjct: 216 LHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCP 275
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
M++ RG+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W
Sbjct: 276 MIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASW 335
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDR 610
+ GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF
Sbjct: 336 YEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVH 395
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKA 670
HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K
Sbjct: 396 HYGRAVIMFGVPYIYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKT 455
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG 730
DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 456 DYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHRQR 515
Query: 731 SIGRKT 736
+ R +
Sbjct: 516 EVYRAS 521
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 67/130 (51%), Gaps = 26/130 (20%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAK +
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKAY----------------------- 37
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 38 ---PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 94
Query: 121 VLAAENRDSV 130
L R +V
Sbjct: 95 WLFVTCRCTV 104
>gi|34527746|dbj|BAC85446.1| unnamed protein product [Homo sapiens]
Length = 453
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/377 (60%), Positives = 292/377 (77%), Gaps = 5/377 (1%)
Query: 357 ASITAHAGIDQKT-----LRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
A+ AHA + T RFC ERL SL+ TLEITD +F + + +FATLV TY +G
Sbjct: 47 AAGPAHASVCPPTPSLLPARFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKG 106
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
F+IIIEPFD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+F
Sbjct: 107 FTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDF 166
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
HPV +F M+L R C+CPM++ RG+DQ+ +S+K + R D V RNYG LL+EM ++VPD
Sbjct: 167 HPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKLETREDIAVIRNYGNLLLEMSAVVPD 226
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG 591
GIV FF SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+ Y++AC+ GRG
Sbjct: 227 GIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRG 286
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
A+ SVARGKV+EGIDF HYGR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLT
Sbjct: 287 AILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLT 346
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
FDA+R AAQCVGR IR K DYG+M+FADKR++R DKR KLP WI HL DA+LNL+ D
Sbjct: 347 FDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEG 406
Query: 712 LHIAREFLRKMAQPYDK 728
+ +A+ FLR+MAQP+ +
Sbjct: 407 VQVAKYFLRQMAQPFHR 423
>gi|18026950|gb|AAL55708.1| RAD3-like DNA helicase [Plasmodium falciparum]
Length = 1056
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 207/432 (47%), Positives = 330/432 (76%), Gaps = 2/432 (0%)
Query: 300 NAWLSNPALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
N +P L DI+K V PGNIR++EHFL+++R +V YL+ + ++ EGP+SF+
Sbjct: 597 NDLCYSPLLMEDIIKNVVIPGNIRKSEHFLNLMRIVVVYLKKYINIYDITSEGPLSFLYK 656
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+D ++C++RL SL+ L+I + +++ + +C+F TL+G Y +GF II EP
Sbjct: 657 FEKDTKLDTSFFKYCFDRLKSLLNNLQIVNIEDYSSLNIVCNFCTLLGNYFKGFIIICEP 716
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+ E I DP++Q +C D+S+A+K V ++++S+++TSGT++P++LYP+LLNF V++ S
Sbjct: 717 YPE-ATGIYDPLIQFACLDSSIAMKTVINKYKSIILTSGTITPLELYPKLLNFKTVLTAS 775
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
F MS R+C+CP+++T+GSD +P+S++F +R+D V +NYG LLV+M +PDGIV +F
Sbjct: 776 FPMSFDRNCVCPLIVTKGSDLIPLSSQFSLRNDLSVIKNYGILLVDMCKCIPDGIVAYFP 835
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY YM+++I++W + G++ I+++KL+FIET+D+V TT+AL N++KACD G+GAVF S+
Sbjct: 836 SYIYMEQVISSWYELGVIANILEYKLIFIETKDIVSTTIALHNFKKACDLGKGAVFLSIC 895
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 658
RGK+AEGIDFD+HYG+ VI+FG+P+QYTLS+IL +RL++L++T+ I+E +FLTFDA+RQA
Sbjct: 896 RGKIAEGIDFDKHYGKCVILFGIPYQYTLSRILKSRLDFLKETYNIQENEFLTFDAMRQA 955
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
+QCVGR+IR+K DYG+MIF+D RY++HDK++KLP WI+ + +++NL+ A+ I+++F
Sbjct: 956 SQCVGRIIRNKKDYGIMIFSDIRYAKHDKKNKLPPWIIKCMDISNINLTVTTAVDISKQF 1015
Query: 719 LRKMAQPYDKAG 730
L M+Q Y + G
Sbjct: 1016 LLNMSQEYRETG 1027
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 148/285 (51%), Gaps = 61/285 (21%)
Query: 91 HNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN- 149
H + G ++ILAIG+S+R+ +C+N +VL R+ +D CRK TA+++R N
Sbjct: 163 HINNLKEFGENSEILAIGISARRCMCINDKVLLKHEREKIDEECRKLTATFIREKKYINN 222
Query: 150 --------PNIET-----------------------------------CEFFENYEKAAS 166
PN++ C ++ENY+K
Sbjct: 223 KIDNEIYHPNVDKISDFILRNRHHLDIEDYFDIYNSRNSLEEYDNIGLCGYYENYKKEFL 282
Query: 167 AAVLPPGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQYLLDPKVA 218
++ PGVYT++DL+ K CPYF A+ +++ + V++ +YQY++DPKV+
Sbjct: 283 YDLIKPGVYTIEDLKVLCKNYKNKENVNVPICPYFCAKKIIEISKVIILNYQYVIDPKVS 342
Query: 219 GIIS--KEMQKE-------SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
+ K+M K ++VFDEAHNID+VC+EALSV++ R L A+ N++++ ++
Sbjct: 343 KALFSWKDMNKNVHLKNKNDIIVFDEAHNIDSVCLEALSVNIDRNILNKASMNITKLMKK 402
Query: 270 IERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILK 314
IE+ K + +L+ E N+++E + L+ + ++N + D +K
Sbjct: 403 IEQSKMLNEQKLKEECNKILEKIKLQKCNQSLNVTNNVINIDNMK 447
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+DV ++FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFNLDDVEIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ 94
K + K I+CTRTV EMEK+L ELK + Y+
Sbjct: 62 YHKKDEG-KFIFCTRTVAEMEKSLIELKKVIQYR 94
>gi|68073281|ref|XP_678555.1| DNA excision-repair helicase [Plasmodium berghei strain ANKA]
gi|56499060|emb|CAH98515.1| DNA excision-repair helicase, putative [Plasmodium berghei]
Length = 528
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 215/440 (48%), Positives = 331/440 (75%), Gaps = 6/440 (1%)
Query: 306 PALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAG 364
P L DI+K V PGNIR++EHFL+++R +V YL+ + V EGP+SF+
Sbjct: 75 PLLMEDIIKNVVMPGNIRKSEHFLNLMRIIVVYLKKYINIYEVTSEGPLSFLYKCEKDTK 134
Query: 365 IDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP 424
+D ++ ++RL SL+ TL++ DTD++ + +C+F TL+G Y +GF II EP+ E
Sbjct: 135 LDTSFFKYSFDRLKSLLNTLQVVDTDDYSALNIVCNFCTLIGNYFKGFIIICEPYPEA-T 193
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
I DPV+Q +C D+S+A+K V +R++S+V+TSGT++P++LYP+LLNF V++ SF MS
Sbjct: 194 GIYDPVIQFACLDSSIAMKSVLNRYKSIVLTSGTITPLELYPKLLNFSTVLTASFPMSFD 253
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
R C+CP+++T+ SD +P+S+++ +R+D V +NYG LLVEM +PDGI+ +F SY YM+
Sbjct: 254 RTCVCPLIVTKSSDLIPLSSQYSLRNDLNVIKNYGFLLVEMCKNIPDGIISYFPSYIYME 313
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
+++TW + GI+ I+++KL+FIET+D+V TT+AL N++KACD G+GAVF S+ RGK+AE
Sbjct: 314 HVMSTWYELGIISNILEYKLIFIETKDIVSTTIALHNFKKACDLGKGAVFLSICRGKIAE 373
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDFD+HYG+ VI+FG+P+QYTLS+IL ARL++L++T+ I+E +FLTFDA+RQA+QCVGR
Sbjct: 374 GIDFDKHYGKCVILFGIPYQYTLSRILKARLDFLKETYNIQENEFLTFDAMRQASQCVGR 433
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
+IR+K DYG+MIF+D RY+R+DK+SKLP WI+ + ++ NL+ +++I+++FL M+Q
Sbjct: 434 IIRNKKDYGIMIFSDIRYTRNDKKSKLPPWIIKCMDISNTNLTIGASVNISKKFLLNMSQ 493
Query: 725 PYDKAGSIGRKTLLSQADLE 744
Y + +T +SQ L+
Sbjct: 494 EYKETD----QTKISQVILQ 509
>gi|156081706|ref|XP_001608346.1| DNA excision-repair helicase [Plasmodium vivax Sal-1]
gi|148800917|gb|EDL42322.1| DNA excision-repair helicase, putative [Plasmodium vivax]
Length = 1041
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 330/443 (74%), Gaps = 6/443 (1%)
Query: 299 PNAWLSNPALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
P +P L D +K V PGNIR++EHFL+++R +V YLR + V EGP+SF+
Sbjct: 581 PTELHYSPLLMEDAVKNVVLPGNIRKSEHFLNLMRIVVMYLRKYVNIYEVTSEGPLSFLY 640
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
+D +FC++RL +L+ L+I D++ + +C+F TL+G+Y +GF II E
Sbjct: 641 KCERETKLDTSFFKFCFDRLKALLNALQIVTVDDYSALNVVCNFCTLLGSYFQGFIIICE 700
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
P+ E I DPV+Q +C D+S+A+K V +++SV++TSGT++P++LYP+LLNF V++
Sbjct: 701 PYPE-ATGIYDPVIQFACLDSSIAMKAVIGKYRSVILTSGTITPLELYPKLLNFKTVLTA 759
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
SF MS R+C+CP+++T SD +P+S++F +RSD V +NYG LLVEM +PDGIV +F
Sbjct: 760 SFPMSFDRNCVCPLIVTNSSDLVPLSSQFSLRSDLTVIKNYGMLLVEMCKTIPDGIVAYF 819
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SY YM+E+I++W + GI+ I++ KL+FIET+D+V TT+AL N+++ACD G+GAVF S+
Sbjct: 820 PSYIYMEEVISSWYELGIITSILECKLIFIETKDIVSTTIALHNFKRACDLGKGAVFLSI 879
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
RGK+AEGIDFD+HYG+ VI+FG+P+QYTLS+IL +RL++L++T+ I+E +FLTFDA+RQ
Sbjct: 880 CRGKIAEGIDFDKHYGKCVILFGIPYQYTLSRILKSRLDFLKETYNIQENEFLTFDAMRQ 939
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
A+QCVGR+IR+K DYG+MIFAD RY+R+DK+SKLP WI+ + +++NL+ A++I+R+
Sbjct: 940 ASQCVGRIIRNKKDYGIMIFADIRYARNDKKSKLPPWIIKCMELSNVNLTVSTAVNISRK 999
Query: 718 FLRKMAQPYDKAGSIGRKTLLSQ 740
FL M+Q Y + G +T LSQ
Sbjct: 1000 FLLNMSQEYKETG----QTKLSQ 1018
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 128/255 (50%), Gaps = 59/255 (23%)
Query: 94 QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA------- 146
Q R ILAIG+S+R+ +CVN RVL R+ +D CRK TA++VR
Sbjct: 158 QRRSGDLQGDILAIGISARRCMCVNERVLRKHEREKIDEECRKLTATFVREKKYISQRIS 217
Query: 147 ------------------------------------AENPNIETCEFFENYEKAASAAVL 170
E +I C ++ENY+K ++
Sbjct: 218 KLGSTHSDRVSEFIVKNRQHIDVEDYFDIYHTRNSLEEYNDIGLCGYYENYKKEFLFELI 277
Query: 171 PPGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQYLLDPKVAG--I 220
PGVYT++DL+ K+ CPYF A+ +++ A V+V +YQY++DPKV+
Sbjct: 278 QPGVYTIEDLKVMCKRYKNAQNETVPICPYFCAKKVIEVAKVIVLNYQYVIDPKVSKSLF 337
Query: 221 ISKE------MQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
I +E + K ++VFDEAHNID+VC+EALSV++ R L AT N+ ++ +IE K
Sbjct: 338 IGREVNSRVNLHKRDIIVFDEAHNIDSVCLEALSVNIDRNVLNKATANIKKLLSKIEASK 397
Query: 275 ATDAGRLRAEYNRLV 289
+ +LR E R++
Sbjct: 398 VLNEEKLREECTRIL 412
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F+L+D+ V+FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFQLDDLEVFFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL 98
K + K I+CTRTV EMEK+L ELK + Y+ L
Sbjct: 62 HGKNDEG-KFIFCTRTVAEMEKSLIELKKVIQYRVDTL 98
>gi|82597077|ref|XP_726529.1| RAD3-like DNA helicase [Plasmodium yoelii yoelii 17XNL]
gi|23481970|gb|EAA18094.1| RAD3-like DNA helicase-related [Plasmodium yoelii yoelii]
Length = 1032
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 208/422 (49%), Positives = 322/422 (76%), Gaps = 2/422 (0%)
Query: 306 PALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAG 364
P L DI+K V PGNIR++EHFL+++R +V YL+ + V EGP+SF+
Sbjct: 579 PLLMEDIIKNIVMPGNIRKSEHFLNLMRIVVVYLKKYINIYEVTSEGPLSFLYKCEKDTK 638
Query: 365 IDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP 424
+D ++ ++RL +L+ TL++ DTD++ + +C+F TL+G Y +GF II EP+ E
Sbjct: 639 LDTSFFKYSFDRLKNLLNTLQVVDTDDYAALNIVCNFCTLIGNYFKGFIIICEPYPE-AT 697
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
I DPV+Q +C D+S+A+K V +R++S+++TSGT++P++LYP+LLNF V++ SF MS
Sbjct: 698 GIYDPVIQFACLDSSIAMKSVLNRYKSIILTSGTITPLELYPKLLNFSTVLTASFPMSFD 757
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
R+C+CP+++T+ SD +P+S+++ +R+D V +NYG LLVEM +PDGI+ +F SY YM+
Sbjct: 758 RNCVCPLIVTKSSDLIPLSSQYSLRNDLNVIKNYGFLLVEMCKNIPDGIISYFPSYIYME 817
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
+++TW + GI+ I+++KL+FIET+D+V TT+AL N++KACD G+GAVF S+ RGK+AE
Sbjct: 818 HVMSTWYELGIISNILEYKLIFIETKDIVSTTIALHNFKKACDLGKGAVFLSICRGKIAE 877
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDFD+HYG+ VI+FG+P+QYTLS+IL ARL++L++T+ I+E +FLTFDA+RQA+QCVGR
Sbjct: 878 GIDFDKHYGKCVILFGIPYQYTLSRILKARLDFLKETYNIQENEFLTFDAMRQASQCVGR 937
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
+IR+K DYG+MIF+D RY+R+DK+ KLP WI+ + ++ NL+ ++I+++FL M+Q
Sbjct: 938 IIRNKKDYGIMIFSDIRYTRNDKKGKLPPWIIKCMDVSNTNLTIGAGVNISKKFLLNMSQ 997
Query: 725 PY 726
Y
Sbjct: 998 EY 999
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 60/254 (23%)
Query: 95 TRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA------- 147
+ G ++ILA+G+S+R+ +CVN +VL R+ +D CRK TA++VR
Sbjct: 180 SSRFGKNSEILAMGISARRCMCVNDKVLLKHEREKIDEECRKLTATFVREKKYISKKLNN 239
Query: 148 -ENPNIET-----------------------------------CEFFENYEKAASAAVLP 171
N NI+ C +FENY+K ++
Sbjct: 240 FSNSNIDRISDFIIKNKHHIDMEDYFNIYNSKNSINEYNDLGLCGYFENYKKNFVYELIE 299
Query: 172 PGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQYLLDPKVAGII-- 221
PGVYT+++L+ K CPYF A+ +++ A VVV +YQY++DPKV+ I
Sbjct: 300 PGVYTIEELKEICKNYKNSENINTPICPYFCAKKIIEIAKVVVLNYQYIIDPKVSKSIFL 359
Query: 222 SKEM------QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKA 275
K++ +K ++VFDEAHNID+VC+EALSV++ R L AT N++ + ++IE+ +
Sbjct: 360 GKDINNRVNYKKNDIIVFDEAHNIDSVCLEALSVNIDRSILNKATMNITTLFKKIEKSRI 419
Query: 276 TDAGRLRAE-YNRL 288
+ +L+ E YN L
Sbjct: 420 VNENKLKEECYNIL 433
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 91/130 (70%), Gaps = 3/130 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+++ ++FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFYLDNLEIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
K +N K I+CTRTV EMEK+L ELK + NY+ + ++ S+ N+ +S
Sbjct: 62 YYKNDNS-KFIFCTRTVAEMEKSLIELKKVINYRINIIKKRNELSE--KISKSNIKEDSD 118
Query: 121 VLAAENRDSV 130
+ EN D++
Sbjct: 119 TIKNENSDTI 128
>gi|70952870|ref|XP_745573.1| DNA excision-repair helicase [Plasmodium chabaudi chabaudi]
gi|56525940|emb|CAH78123.1| DNA excision-repair helicase, putative [Plasmodium chabaudi
chabaudi]
Length = 970
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 328/440 (74%), Gaps = 7/440 (1%)
Query: 306 PALPSDILKEAV-PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAG 364
P L DI+K V PGNIR++EHFL+++R +V YL+ + V EGP+SF+
Sbjct: 518 PLLMEDIIKNVVMPGNIRKSEHFLNLMRIVVVYLKKYINIYEVTSEGPLSFLYKCEKDTK 577
Query: 365 IDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP 424
+D ++ ++RL SL+ L++ DTD++ + +C+F TL+G Y +GF II EP+ E
Sbjct: 578 LDTSFFKYSFDRLKSLLNALQVVDTDDYSALNVVCNFCTLIGNYFKGFIIICEPYPE-AT 636
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
I DPV+Q +C D+S+A+K V +R++SVV+TSGT++P++LYP+LLNF V++ SF MS
Sbjct: 637 GIYDPVIQFACLDSSIAMKSVLNRYKSVVLTSGTITPLELYPKLLNFSTVLTASFPMSFD 696
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
R+C+CP+++T+ SD +P+S+++ +R+D V +NYG LLVEM +PDGI+ +F SY YM+
Sbjct: 697 RNCVCPLIVTKSSDLIPLSSQYSLRNDLNVIKNYGFLLVEMCKNIPDGIISYFPSYIYME 756
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
+++TW + GI+ I+++KL+FIET+D+V TT+AL N++K CD G+GAVF S+ RGK+AE
Sbjct: 757 HVMSTWYELGIISNILEYKLIFIETKDIVSTTIALHNFKK-CDLGKGAVFLSICRGKIAE 815
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDFD+HYG+ VI+FG+P+QYTLS+IL ARL++L++T+ I+E +FLTFDA+RQA+QCVGR
Sbjct: 816 GIDFDKHYGKCVILFGIPYQYTLSRILKARLDFLKETYNIQENEFLTFDAMRQASQCVGR 875
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
+IR+K DYG+MIF+D RY+R+DK+ KLP WI+ + +++NL+ + I+++FL M+Q
Sbjct: 876 IIRNKKDYGIMIFSDIRYARNDKKGKLPPWIIKCMDVSNINLTIGAGVSISKKFLLNMSQ 935
Query: 725 PYDKAGSIGRKTLLSQADLE 744
Y + +T +SQ L+
Sbjct: 936 EYKETD----QTKISQVILQ 951
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 209/389 (53%), Gaps = 99/389 (25%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+D+ ++FPYD IYPEQY+YM LK LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFYLDDLEIFFPYDYIYPEQYAYMKYLK-TLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQT------------------------- 95
K ++ K I+CTRTV EMEK+L ELK + NY+
Sbjct: 61 YYKNDDS-KFIFCTRTVAEMEKSLIELKKVINYRINIIKKRNEISEQIVKTDIKEDSDMI 119
Query: 96 -------------RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWV 142
G ++ILA+G+S+R+ +CVN +VL R+ +D CRK TA++V
Sbjct: 120 RNEYKNEEDDNAWNRFGRNSEILAMGISARRCMCVNEKVLLKHEREKIDEECRKLTATFV 179
Query: 143 RALA--------AENPNIE-----------------------------------TCEFFE 159
R N NI+ C +FE
Sbjct: 180 REKKYISKKLNNYSNSNIDRISDFIIKNKHHIDMEDYFSIYNSKNSISEYNDLGLCGYFE 239
Query: 160 NYEKAASAAVLPPGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQY 211
NY+K ++ PGVYT+++L+ K CPYF A+ +++ A V+V +YQY
Sbjct: 240 NYKKDFVYELIEPGVYTIEELKTLCKNYKNRENMNAPICPYFCAKKIIEIAKVIVLNYQY 299
Query: 212 LLDPKVAGII--SKEM------QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
++DPKV+ I K++ +K ++VFDEAHNID+VC+EALSV++ R L A+ N+
Sbjct: 300 IIDPKVSKSIFLGKDINNRVNYKKNDIIVFDEAHNIDSVCLEALSVNIDRSILNKASMNI 359
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGL 292
+ + ++IE+ + + +LR E ++++ +
Sbjct: 360 TTLFKKIEKSRIVNEDKLREECYKILKKI 388
>gi|78190773|gb|ABB29708.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH [Aphrocallistes vastus]
Length = 413
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/413 (51%), Positives = 298/413 (72%), Gaps = 2/413 (0%)
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVC+E++SV + R TL GA +NL ++ EIER K DA +LR EY RLV+GL A
Sbjct: 1 NVCVESMSVKLTRTTLAGALKNLQTLSSEIERIKQEDANKLRQEYLRLVQGLREARIAKE 60
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ ++ +P LP IL+EAVPGNIR+AEHFL+ ++R V+YL+ R+ + V E P F+
Sbjct: 61 ADQYIGSPVLPDAILEEAVPGNIRKAEHFLNFMKRFVEYLKSRMRSTRVISETPPLFLTH 120
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I++K L+FCYERL SL+ +I + +F H+ + +FATLV TY +GF ++IEP
Sbjct: 121 ASKTVCIERKPLKFCYERLKSLLSATDIYNITDFSHLIXVANFATLVATYEKGFMMLIEP 180
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+ + P +PV+ LSC DAS+A K +F RFQSV++TSGTLSP+D+YP+LL F+PV++ S
Sbjct: 181 YTDLNPTAHNPVMHLSCLDASVASKSIFQRFQSVILTSGTLSPLDMYPKLLAFNPVLTIS 240
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
MSL+R C CP+V++RG+DQ+ ++TKF R D V RNYG LL E+ IVPDG+VCFF
Sbjct: 241 LSMSLSRPCACPLVISRGNDQMAITTKFGDREDANVVRNYGNLLSELSHIVPDGMVCFFT 300
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA 598
SY+YM+ ++A W + GIL +I ++KL+FIETQ+ ET LAL NY +AC+ GRGAV SVA
Sbjct: 301 SYTYMESVVAAWCEQGILSKIQKNKLIFIETQNSNETRLALTNYWRACEKGRGAVLLSVA 360
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
RGKV+EG+DF HYGR ++M G+P+ YT S++L RL+YL + QI+E DFLT
Sbjct: 361 RGKVSEGVDFTGHYGRCIVMLGLPYVYTQSRLLKLRLDYLNENLQIRENDFLT 413
>gi|198461164|ref|XP_002138964.1| GA25101 [Drosophila pseudoobscura pseudoobscura]
gi|198137257|gb|EDY69522.1| GA25101 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 197/333 (59%), Positives = 263/333 (78%), Gaps = 1/333 (0%)
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVS 476
EPFD++ P + +P+L SC D+S+A+ PVF RFQ+VVITSGTLSP+D+YP++L+F PVV
Sbjct: 68 EPFDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVM 127
Query: 477 RSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
SF M+L R C+ PM++++G+DQ+ +S+KF+ R D V RNYG+LLVE+ VPDG+VCF
Sbjct: 128 SSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGVVCF 187
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFS 596
F SY Y++ ++A+W D GI+ ++++KL+FIETQD ET+ AL NY KACDCGRGAV +
Sbjct: 188 FTSYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLA 247
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALR 656
VARGKV+EG+DFD HYGR V+MFG+P+ YT S+IL ARL+YLRD FQI+E DFLTFDA+R
Sbjct: 248 VARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMR 307
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAR 716
AAQCVGR +R K DYG+MIFADKR+SR DKRS+LP WI HL D+ NLST+ A+ +AR
Sbjct: 308 HAAQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHLVDSFCNLSTEEAVQLAR 367
Query: 717 EFLRKMAQPYDKAGSIGRKTLLSQADLEKMTND 749
+LR+MAQP+ + +G +LL+ A LE M +
Sbjct: 368 RWLRRMAQPFSREDQLG-ISLLTLAQLENMEQE 399
>gi|378755713|gb|EHY65739.1| TFIIH helicase [Nematocida sp. 1 ERTm2]
Length = 627
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/629 (38%), Positives = 359/629 (57%), Gaps = 57/629 (9%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MI K+ ++ V+FP +NIY EQ Y+ EL + KGHCL+EMPTGTGKTI LLS + SY
Sbjct: 1 MIIKMGNIEVFFPKNNIYQEQMQYIKELYEVVQDKGHCLIEMPTGTGKTIVLLSFLMSYQ 60
Query: 61 L-----------------SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK 103
+ + E K+IYCTRT E+EK L ELK L++Y ++ P
Sbjct: 61 IHLMTKEEGYEKIREKGFKRREGVFKIIYCTRTTAEIEKVLEELKELYDYIKTYI-PDLD 119
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEK 163
+GL++R+ LC+N + A + V+ CR+ E C F++ Y K
Sbjct: 120 YTGLGLAARRTLCLNPDINA--DPSLVNKRCRQEK--------------EDCTFYKEYLK 163
Query: 164 AASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
+P G++TL L+ G Q C Y+ AR + A+ VVY+Y Y++DP+++ ++S
Sbjct: 164 MTEN--IPSGIHTLDGLKEIGTQTNRCAYYTARSSIFLADCVVYTYNYMIDPRISELVSS 221
Query: 224 EMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI--ERFKATDAGRL 281
VVVFDEAHNID+VC+E L+V + R L+ A ++L I+ + R
Sbjct: 222 GFGSNCVVVFDEAHNIDSVCVEVLTVHINRTCLDKAWKSLCTISDYMVSRNISLNRNERE 281
Query: 282 RAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
R+ YNR G ++ + A L S VPG +R F+ +R++++ + +
Sbjct: 282 RSMYNR---GKGIKSDY--ASLLEGHKSSRKFTSLVPGTLRNISGFISATKRIIEFFKTK 336
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITD-TDEFLHIQTICD 400
L+ N+ E FV ++ ID +L RL +M LE+ TD++ + +CD
Sbjct: 337 LKNVNLTTETTEVFVKTLENTVFIDFSSLIHLSRRLREIMGELEMHGFTDDYSELSRVCD 396
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
F +L G + +GFS+I EPF+ I +PVL LSC D+S+A+K VF + +V+ITSGTLS
Sbjct: 397 FCSLSGQFKKGFSVIFEPFNSY--SIYEPVLHLSCLDSSIAMKRVFSGYNNVIITSGTLS 454
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL--------PVSTKFDMRSDP 512
PI +YPRLL+F PV S +S R + +++T+GSDQ+ +S+ F +R++P
Sbjct: 455 PISIYPRLLDFTPVKSVEIDVSSKRG-LHALIVTKGSDQMTLAMDGSNAISSTFSLRAEP 513
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
V RNYG LL+EM VPDG+VCFF SY YM+E +A W +SGI+K+IM+ KL+F+E+ D
Sbjct: 514 AVVRNYGNLLLEMAMSVPDGMVCFFPSYRYMEEAVAAWTESGIIKKIMECKLIFVESFDH 573
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGK 601
ET AL+ Y++AC+ GRG + RGK
Sbjct: 574 AETERALEGYKRACETGRGGTY--AQRGK 600
>gi|119577746|gb|EAW57342.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_b [Homo sapiens]
Length = 429
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/413 (50%), Positives = 283/413 (68%), Gaps = 2/413 (0%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD C TAS+VRA + ++ C F+E ++ LP G+Y L DL
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+A G++QGWCPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNL 298
NVCI+++SV++ R+TL+ NL + + + R K TD RLR EY RLVEGL A
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+A L+NP LP ++L+EAVPG+IR AEHFL LRRL++Y++ RL ++V +E P +F++
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG 360
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
+ I +K LRFC ERL SL+ TLEITD +F + + +FATLV TY +G
Sbjct: 361 LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKG 413
>gi|90075836|dbj|BAE87598.1| unnamed protein product [Macaca fascicularis]
Length = 323
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 185/292 (63%), Positives = 238/292 (81%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L R C+CPM++ RG
Sbjct: 2 DASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRG 61
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
+DQ+ +S+KF+ R D V RNYG LL+EM ++VPDGIV FF SY YM+ +A+W + GIL
Sbjct: 62 NDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGIL 121
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
+ I ++KL+FIETQD ET++AL+ Y++AC+ GRGA+ SVARGKV+EGIDF HYGR V
Sbjct: 122 ENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAV 181
Query: 617 IMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMI 676
IMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+
Sbjct: 182 IMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMV 241
Query: 677 FADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
FADKR++R DKR KLP WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 242 FADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 293
>gi|312097463|ref|XP_003148983.1| TFIIH basal transcription factor complex helicase subunit [Loa loa]
Length = 374
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/374 (52%), Positives = 265/374 (70%), Gaps = 15/374 (4%)
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVL 431
FC ER SL TLE+ D +F + I +FATLV TY RGF+I+IEP DE+ L
Sbjct: 1 FCAERFASLTRTLELADISDFSSLVLITNFATLVSTYARGFTIVIEPLDEKSGIGHSCTL 60
Query: 432 QLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM 491
LSC DAS+A++P+F R+++VVITSGTLSP+D+YP++L+F P V S M+L R CI P+
Sbjct: 61 HLSCMDASVAIRPIFQRYRTVVITSGTLSPLDMYPKILDFDPAVMASLSMTLARPCIAPL 120
Query: 492 VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
++++G+DQ+ ++++F+ R D V RNYG L++E+VS+VPDG+V F
Sbjct: 121 IVSKGNDQVAMTSRFESREDAAVIRNYGSLVLELVSLVPDGVVVFL-------------- 166
Query: 552 DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRH 611
GI+ E++++KL+FIET D +ET++AL+ Y +ACDCGRGAVFFSVARGKV+EGIDF H
Sbjct: 167 -PGIIDELLKYKLLFIETTDALETSIALEKYVEACDCGRGAVFFSVARGKVSEGIDFSHH 225
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKAD 671
GR VIM GVP+ YT S+IL ARLEYLR+ I+E DFLTFDA+RQAAQC+GR +R K+D
Sbjct: 226 LGRAVIMLGVPYVYTESRILRARLEYLREQLGIRENDFLTFDAMRQAAQCMGRALRGKSD 285
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGS 731
YG+MIFADKR+SR DK KLP WI ++ ++NLS + A IAR++ MAQ + K
Sbjct: 286 YGLMIFADKRFSRKDKMGKLPRWIQEYITPGNVNLSIEEAAIIARKWFPLMAQSFTKDHQ 345
Query: 732 IGRKTLLSQADLEK 745
+G L + EK
Sbjct: 346 LGISLLTEEMLREK 359
>gi|440295138|gb|ELP88051.1| DNA repair helicase rad3/xp-D, putative [Entamoeba invadens IP1]
Length = 778
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 268/803 (33%), Positives = 431/803 (53%), Gaps = 101/803 (12%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAK----GHCLLEMPTGTGKTIALLSLITS 58
F + V ++FPY IYPEQYS++ + + +K ++EM TGTGKT+++++
Sbjct: 7 FTITGVPIHFPYKYIYPEQYSFIKTVVSGVTSKTPPHKQIVIEMGTGTGKTVSIITAGKG 66
Query: 59 YVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
+ + N +IYCTRTV EM + ELK+L+ I A+ L+SRK++C
Sbjct: 67 LLGTTGSNVDHVIYCTRTVDEMRQIFKELKVLN------------IPAVALASRKHMC-- 112
Query: 119 SRVLAAENRDSVDAA--CRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
L + RDS A+ C++R S C+++++ E +PP +
Sbjct: 113 ---LLEDVRDSPHASVLCKERRESGF------------CQYYQDIEDIN----IPP-IAG 152
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK--ESVVVFD 234
+ DL FGK+ CPY+ +R + +V +Y YL+DPKV + +M +++VFD
Sbjct: 153 VDDLVEFGKKNRRCPYYCSRRNFFKSPFIVCTYNYLVDPKVENVTIGKMSDLHRTLLVFD 212
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL 294
EAHNIDN ++A ++S+ +T+E AT +L+R+++ + K+ ++ L EYNRLVEGL
Sbjct: 213 EAHNIDNAFVDAQTMSLSLETIELATVSLTRLSKLLTAEKSKES--LEMEYNRLVEGLRR 270
Query: 295 RGNL-----P---NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
+ P N N A + +PG+ R + F+ +L+R+V + R RL
Sbjct: 271 SQAIYEDGEPYFYNETKKNEAGEDVPYDKVLPGSFRNSSQFVAILKRVVNFFRERLHEAQ 330
Query: 347 VEKEGPVS---------FVASITAHAGIDQKTLRFCYERLHSLMLTL-----EITDT--D 390
+K+ + V + I + ++ RL L+ TL E D D
Sbjct: 331 SKKDQRLKGQHTAQVKDIVTLLCDVLVIPPEIIKSLPTRLRVLIKTLGDEGGERKDVTGD 390
Query: 391 EFLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR 448
F + + + DFA L+ GFS + + + P+L L C DA+ A + V +
Sbjct: 391 HFYYDALYLVADFAALLCIGQEGFSYVPDVVKNDEDNEVHPILYLVCVDAANAAQNVLTK 450
Query: 449 FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC-----ICPMVLTRGSDQLPVS 503
+ + TSGTL+P+D + +LL + VV + K ++ C ICP+ +T+G D++ VS
Sbjct: 451 MHTTLFTSGTLAPLDTFIKLLGMNNVVEK--KQIVSPVCGVGRRICPLFVTKGFDRIAVS 508
Query: 504 -----------------TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
T+F R+D + +YGKL+VE+ IVPDGI+CFF SY YM+
Sbjct: 509 SQLADAKMSQLRGDGFSTQFPFRADRLILHSYGKLIVELSKIVPDGILCFFPSYVYMNLC 568
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
I+ W++ ++ I+ +KL+FIE+++ ET++A NYR AC G+GAV +VARG+++EGI
Sbjct: 569 ISHWDEMDVIGNILLNKLLFIESKNAEETSIAFQNYRLACHSGKGAVMLAVARGRLSEGI 628
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVI 666
DF H R V++ G P+Q T + RL YL I + D+ FDA+R A QCVGR +
Sbjct: 629 DFADHLARAVVIIGAPYQQTSPIPIQERLNYLDKKKVIAKEDYFVFDAMRAANQCVGRCL 688
Query: 667 RSKADYGMMIFADKRYSRHDKR--SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
R K DY ++I+ADKRY +D + + +P WI+ L + +LS D ++ IA++FL KM+
Sbjct: 689 RGKMDYAVVIYADKRYKFNDAKILNTMPQWIIDALMKQNADLSADQSVVIAKDFLMKMSF 748
Query: 725 PYDK----AGSIGRKTLLSQADL 743
+D +G KTL ++ D+
Sbjct: 749 SFDSDFPLEDMVG-KTLWTEKDV 770
>gi|167539830|ref|XP_001741373.1| DNA repair helicase rad3/xp-D [Entamoeba dispar SAW760]
gi|165894074|gb|EDR22158.1| DNA repair helicase rad3/xp-D, putative [Entamoeba dispar SAW760]
Length = 788
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 255/806 (31%), Positives = 414/806 (51%), Gaps = 100/806 (12%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRAL-DAKG----HCLLEMPTGTGKTIALLSLIT 57
F + + ++FPY IYPEQY ++ + + D K ++EM +GTGKT+++++
Sbjct: 13 FSVNGIEIHFPYQFIYPEQYQFIKTVTSGVTDNKKPPHKQIIIEMGSGTGKTVSIITAAK 72
Query: 58 SYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
+ ++ N IYCTRT+ E+++ EL L I +I L+SR +LC+
Sbjct: 73 GLLDNQGSNISHTIYCTRTIDEIKRVFNELTKL------------SIPSIVLASRTHLCL 120
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
V R + L E + C ++ E P + +
Sbjct: 121 LDDV---------------RESKHAPLLCQEKRDKGLCPYYHEIEDEI------PTIAGI 159
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM--QKESVVVFDE 235
+L FGKQ CPYF +R + +V +Y Y+LDPK + +M ++++VFDE
Sbjct: 160 DELVQFGKQHRQCPYFCSRKNFYKSPFIVCTYNYILDPKEENVTIGKMIDLDQTLLVFDE 219
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ--EIERFKATDAGRLRAEYNRLVEGLA 293
AHN+DN+ ++A ++++ +T+E AT +L+R+ + IE K L EY RLVEGL
Sbjct: 220 AHNVDNIVVDAQTLTLSLETIELATISLARLTKLLSIEASKKP----LENEYKRLVEGLR 275
Query: 294 LRGNLPNAWLSNPALPSDILK---------EAVPGNIRRAEHFLHVLRRLVQYLRGRLET 344
N P ++ K + +PG R + F+ +++R+V + R +L
Sbjct: 276 RSELTNNIEEGEPYFYNEKKKTSEGDVDYDKVIPGTFRNSSQFVLLMKRIVNFFREKLHE 335
Query: 345 ENVEKEGPVS---------FVASITAHAGIDQKTLRFCYERLHSLMLTL-------EITD 388
+K+ + V + + + + ++F RLH L+ TL +
Sbjct: 336 APTKKQQRIKEQHSIQVKDIVTGLCDSSVLTPEIIKFIPNRLHLLIQTLGDEYGGRQDVK 395
Query: 389 TDEFLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
D F + + + DFA L+ + GFS + + VL L C DA+ A++P+
Sbjct: 396 GDSFYYDALYLVADFAALLCSSQEGFSYVPDVVKIDKDDYYHSVLNLVCVDAANAIQPIL 455
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC---ICPMVLTRG------- 496
+RF S+V TSGTLSP+ Y +L VV S T + ICP+ +T+G
Sbjct: 456 NRFHSIVFTSGTLSPLKTYINILGLKNVVEEKQIRSPTSNVGRRICPLFVTKGFDRIAIT 515
Query: 497 ------------SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
SD L +S++F R+D + +YGKL+VE+ VPDG++CFF SY+YM+
Sbjct: 516 SQLADSKYAGARSDPLILSSQFFYRADRLILHSYGKLIVELSKTVPDGVLCFFPSYAYMN 575
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
I+ WN+ I + I Q+KLVFIE+++ ET+LA NY+ AC G+GAV V RG+++E
Sbjct: 576 ICISYWNEMKIFESIAQNKLVFIESKNAYETSLAFQNYKLACHTGKGAVLLCVIRGRLSE 635
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDF H R V++ G P+ + + R+EYL + I + D+ TFDA+R QC+G+
Sbjct: 636 GIDFTNHLARAVLIIGAPYLQSSPIPIKERVEYLNNKKIISKDDYFTFDAMRTCNQCLGK 695
Query: 665 VIRSKADYGMMIFADKRYSRHDK--RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
+R K DY ++I+ADKRY +D+ ++ +P WIL ++ + +LS D ++ +A+EFL KM
Sbjct: 696 CLRGKTDYTVVIYADKRYKLNDRNVKASMPQWILDAIQKRYTDLSADQSIVLAKEFLMKM 755
Query: 723 AQPYDKAGSIGR---KTLLSQADLEK 745
+ +D I KTL + D+ K
Sbjct: 756 SYSFDTQFPIKEMIGKTLWTLDDIRK 781
>gi|67466685|ref|XP_649489.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56465941|gb|EAL44103.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708315|gb|EMD47798.1| DNA repair helicase rad3/xpD, putative [Entamoeba histolytica KU27]
Length = 788
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/785 (31%), Positives = 412/785 (52%), Gaps = 97/785 (12%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRAL-DAKG----HCLLEMPTGTGKTIALLSLIT 57
F + + ++FPY IYPEQY ++ + + D K ++EM TG+GKT+++++
Sbjct: 13 FSVNGIEIHFPYQFIYPEQYQFIKTVTSGVTDNKKPPHKQIIIEMGTGSGKTVSIITAAK 72
Query: 58 SYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
+ ++ N IYCTRT+ E+++ EL L I +I L+SR +LC+
Sbjct: 73 GLLDNQGSNISHTIYCTRTIDEIKRIFNELTKL------------SIPSIVLASRAHLCL 120
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
V R + L E + C ++ + E P V +
Sbjct: 121 LDDV---------------RESKHASLLCQEKRDKGLCPYYHDIEDEI------PIVAGI 159
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM--QKESVVVFDE 235
+L FGKQ CPYF +R + +V +Y Y+LDPK + +M ++++VFDE
Sbjct: 160 DELVQFGKQHRRCPYFCSRKNFYKSPFIVCTYNYILDPKEENVTVGKMIDLDQTLLVFDE 219
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGR--LRAEYNRLVEGL- 292
AHN+DN+ ++A ++++ +T+E AT +L+R+ + + +A + L EY RLVEGL
Sbjct: 220 AHNVDNIVVDAQTLTLSLETIELATISLARLT----KLLSVEASKKPLENEYKRLVEGLR 275
Query: 293 --ALRGNL----PNAWLSNPALP-SDI-LKEAVPGNIRRAEHFLHVLRRLVQYLRGRLET 344
L N+ P + P DI + +PG R + F+ +++R+V + R +L
Sbjct: 276 RSELTNNIEEGEPYFYNEKKKTPEGDIDYDKVIPGTFRSSSQFVLLMKRIVNFFREKLHE 335
Query: 345 ENVEKEGPVS---------FVASITAHAGIDQKTLRFCYERLHSLMLTL-------EITD 388
+K+ + V + + + + ++F RLH L+ TL +
Sbjct: 336 APTKKQQRIKEQHSIQVKDIVTGLCDSSVLTPEIIKFIPNRLHLLIQTLGDEYGGRQDVK 395
Query: 389 TDEFLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
D F + + + DFA L+ + GFS + + VL L C DA+ A++P+
Sbjct: 396 GDSFYYDALYLVADFAALLCSSQEGFSYVPDVVKIDKDDYYHSVLNLVCVDAANAIQPIL 455
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC---ICPMVLTRG------- 496
+RF S+V TSGTLSP+ Y +L VV S T D ICP+ +T+G
Sbjct: 456 NRFHSIVFTSGTLSPLKTYINILGLKNVVEEKQIRSPTSDIGRRICPLFVTKGFDRIAIT 515
Query: 497 ------------SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
SD L +S++F ++D + +YGKL+VE+ VPDG++CFF SY+YM+
Sbjct: 516 SQLADSKYAGARSDPLILSSQFFYKADRLILHSYGKLIVELSKTVPDGVLCFFPSYAYMN 575
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
I+ WN+ I + I Q+KL+FIE+++ ET+LA NY+ AC G+GAV V RG+++E
Sbjct: 576 ICISYWNEMKIFESIAQNKLIFIESKNAYETSLAFQNYKLACHTGKGAVLLCVTRGRLSE 635
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDF H R V++ G P+ + + R+EYL + I + D+L FDA+R QC+G+
Sbjct: 636 GIDFTNHLARAVLIIGAPYLQSSPIPIKERVEYLNNKKIISKDDYLIFDAMRTCNQCLGK 695
Query: 665 VIRSKADYGMMIFADKRYSRHDK--RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
+R K DY ++I+ADKRY +D+ ++ +P WIL ++ +++LS D ++ +A+EFL KM
Sbjct: 696 CLRGKNDYTVVIYADKRYKINDRNVKASMPQWILDAIQKRYIDLSADQSIVLAKEFLMKM 755
Query: 723 AQPYD 727
+ +D
Sbjct: 756 SYSFD 760
>gi|402465654|gb|EJW01367.1| DNA repair helicase (rad3) [Edhazardia aedis USNM 41457]
Length = 942
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 280/442 (63%), Gaps = 32/442 (7%)
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCY 374
E PGNIR + HFL L+RL +Y + +L+T ++ E SF SI ID+KTL F
Sbjct: 500 EFAPGNIRNSIHFLSTLKRLTEYFKTKLKTTHLTTETTSSFCKSIKDLTLIDKKTLSFLS 559
Query: 375 ERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLS 434
RL L+ TL + E I+ +CDF ++ Y GFSII EPFD + P+L+L
Sbjct: 560 TRLSLLIRTLNLNGKIELSAIKKLCDFGSIAAQYQNGFSIIFEPFDSMAQTVFSPILRLY 619
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C DAS+A+K VF ++SV+ITSGTLSP+D Y ++L+F PV + + L R+CI P+++T
Sbjct: 620 CMDASIALKSVFS-YRSVIITSGTLSPMDFYCKILDFIPVKHKEIGIRLKRNCIGPLIVT 678
Query: 495 RGSDQL-------------------------------PVSTKFDMRSDPGVARNYGKLLV 523
+G+DQ+ VS+ + +R+DP V RNYG L++
Sbjct: 679 KGNDQMMIKIGEESQLKNNMPSSISEKPKDNVQGKENVVSSSYSLRNDPSVIRNYGLLII 738
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR 583
E I PDG+V FF SY +M+EI++ W++ I+ EI ++KL+FIET D+ ET AL ++
Sbjct: 739 EFSKITPDGLVVFFPSYIFMEEIVSCWSELNIITEIKKNKLIFIETPDIKETEKALKLFK 798
Query: 584 KACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ 643
AC+ GRG V FSVARGKV+EG+DF +GR VI+ GVP+Q+T S L RLEYL F
Sbjct: 799 IACENGRGGVLFSVARGKVSEGVDFKNEHGRCVIVLGVPYQFTESIRLKKRLEYLNQNFG 858
Query: 644 IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
I +FL+FDA+R AAQC+GRV+R K DYG+MI AD R+ + D++ KLP WIL+ + +
Sbjct: 859 ISSSEFLSFDAMRHAAQCLGRVLRDKNDYGLMIMADYRFEKGDRKKKLPKWILNCIEGGN 918
Query: 704 LNLSTDMALHIAREFLRKMAQP 725
NLS DMA+ IA+ F R+MAQP
Sbjct: 919 TNLSIDMAVCIAKRFYREMAQP 940
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 177/403 (43%), Gaps = 129/403 (32%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+ ++TVYFP+ +YPEQ+ Y+ E+ L +GHCLLEMP+GTGKTI+LLS I SY+L
Sbjct: 5 INEITVYFPFPTMYPEQHEYISEVLSLLKTQGHCLLEMPSGTGKTISLLSSIISYILHLK 64
Query: 65 ENPVKL------------------------------------IYC------TRTVHEMEK 82
EN + IYC TR + ++
Sbjct: 65 ENFRTVQTECNTDITSSALNKRAKISKNKTDLSAVQNCYETEIYCEKNDFVTRNISNLDS 124
Query: 83 T---------------------LAELKLLHNY-QTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ L ELK L NY + + + L +GL+SR LCVN
Sbjct: 125 SFSRAIPKIMYGSRTVGEIEKALEELKFLINYIENEYKIDMSDFLGVGLTSRNVLCVNEN 184
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV------ 174
A + S++ AC + T AE+P + C++F+N E S +
Sbjct: 185 --ARKMPFSIEHACNRLT-------NAEDPK-QGCKYFQNLEDLGSNFTSLNSIKLKKNC 234
Query: 175 -----------YTLQD--------------LRAFGKQQGWCPY----------------- 192
Y++ D +F + +C Y
Sbjct: 235 NEINCADKCQNYSVDDGEGKNIMGNSMSNEQTSFDLKANFCGYKPLNGVYTLADLVTLGK 294
Query: 193 -------FLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIE 245
FLAR ++ +++++++Y YL+DP++ I+ KE+ S+V+FDEAHNIDN CIE
Sbjct: 295 TKNICPYFLARKILASSDIIIFTYNYLIDPRIKSIVLKEIGLNSIVIFDEAHNIDNACIE 354
Query: 246 ALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
A+SV ++R LE A + + + EI++ +A LR E ++
Sbjct: 355 AMSVDIKRSDLENANKEIKALELEIQKARAESIEILREEAEKI 397
>gi|30584019|gb|AAP36258.1| Homo sapiens excision repair cross-complementing rodent repair
deficiency, complementation group 2 (xeroderma
pigmentosum D) [synthetic construct]
Length = 406
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/389 (50%), Positives = 265/389 (68%), Gaps = 2/389 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y + P KLIYC+RTV E+EK +
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L N+ + G L + LSSRKNLC++ V VD C TAS+VRA
Sbjct: 61 EELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRA 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ ++ C F+E ++ LP G+Y L DL+A G++QGWCPYFLAR+ + ANV
Sbjct: 121 QYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANV 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+ NL
Sbjct: 181 VVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLE 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG+IR
Sbjct: 241 TLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL SL+
Sbjct: 301 TAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLH 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRG 411
TLEITD +F + + +FATLV TY +G
Sbjct: 361 TLEITDLADFSPLTLLANFATLVSTYAKG 389
>gi|195947407|ref|NP_001124339.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 2 [Homo sapiens]
gi|30582605|gb|AAP35529.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D) [Homo
sapiens]
Length = 405
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/389 (50%), Positives = 265/389 (68%), Gaps = 2/389 (0%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y + P KLIYC+RTV E+EK +
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVI 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L N+ + G L + LSSRKNLC++ V VD C TAS+VRA
Sbjct: 61 EELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRA 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+ ++ C F+E ++ LP G+Y L DL+A G++QGWCPYFLAR+ + ANV
Sbjct: 121 QYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANV 180
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+ NL
Sbjct: 181 VVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLE 240
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ + + R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG+IR
Sbjct: 241 TLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIR 300
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
AEHFL LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL SL+
Sbjct: 301 TAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLH 360
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRG 411
TLEITD +F + + +FATLV TY +G
Sbjct: 361 TLEITDLADFSPLTLLANFATLVSTYAKG 389
>gi|67469709|ref|XP_650832.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467489|gb|EAL45446.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 770
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/805 (30%), Positives = 414/805 (51%), Gaps = 114/805 (14%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKG-----HCLLEMPTGTGKTIALLSL 55
+IF + + ++FPY IYPEQY ++ + + ++EM TGTGKT+++++
Sbjct: 12 IIFTVNGIEIHFPYQFIYPEQYQFIKTVTSGVTNNKKPPHKQIIIEMGTGTGKTVSIITA 71
Query: 56 ITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
+ ++ N IYCTRT+ E+++ EL L I ++ L+SR +L
Sbjct: 72 AKGLLDNQGSNISHTIYCTRTIDEIKQIFNELTKL------------SIPSVVLASRAHL 119
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVY 175
C+ V R+ S ++ + + C ++ + E P V
Sbjct: 120 CLLDDV-------------RESKHSQLKCQEKRDKGL--CPYYHDIEDEI------PIVA 158
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK--ESVVVF 233
+ +L FGKQ CPYF +R+ + +V +Y Y+LDPKV + +M ++++VF
Sbjct: 159 GIDELVQFGKQHQRCPYFCSRNNFYKSPFIVCTYNYILDPKVENVTVGKMSDLHQTLLVF 218
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ--EIERFKATDAGRLRAEYNRLVEG 291
DEAHN+DNV ++A ++++ TLE AT +L R+ + IE K L+ EY RLVEG
Sbjct: 219 DEAHNVDNVVVDAQTLTLSLDTLELATISLVRLTKLLSIEESKKP----LKNEYKRLVEG 274
Query: 292 LALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
L R + P + + +P + + F+ ++ +V + R +L ++ K+
Sbjct: 275 L--RHSEPTKRIEE--------ENNIPIDTTTSIQFVVLMNDIVNFFREKLREAHIHKKQ 324
Query: 352 PVSFVASITAHAGIDQKTLRFCYE-------------RLHSLMLTL-------EITDTDE 391
++ SI +D FC RLH L+ L + D
Sbjct: 325 HINEHCSIPIKNIVDS----FCNSLALTPEIVSLIPLRLHLLIKALGDEYGGRQDVKGDS 380
Query: 392 FLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRF 449
F + + + DFA L+ + GFS + + + VL L C DA+ A++P+ ++F
Sbjct: 381 FYYDDLYLVADFAALLCSCQEGFSYVPDVVKMDKDNCFHSVLNLICVDAAHAIQPILNKF 440
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVV-----SRSFKMSLTRDCICPMVLTRGSDQLPV-- 502
S++ TSGTLSP+ Y +L + VV + SF S+ R ICP+ +T+G D + +
Sbjct: 441 HSIIFTSGTLSPLKTYINILGLNNVVEEKQITSSFS-SMRR--ICPLFVTKGFDSISITS 497
Query: 503 -----------------STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
S+++ R++ + +YG+L++E+ VPDGI+CFF SYSYM+
Sbjct: 498 QSSDTPGTEIKQDRILFSSQYAYRTNRLIIHSYGRLILELSKTVPDGILCFFPSYSYMNI 557
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEG 605
I+ W++ I++ I +KL+F+E+ D ET+LA NYR AC G+GA+ F V RG+++EG
Sbjct: 558 CISYWDEMKIIESIYSNKLIFVESNDSEETSLAFQNYRLACHTGKGAILFCVTRGRLSEG 617
Query: 606 IDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRV 665
I+F H R V++ G P+ + + R+EYL + I + ++L FDA+R QCVGR
Sbjct: 618 INFTNHLARAVLIIGAPYLQSEILTIKERIEYLDNKKIISKDEYLIFDAMRTCNQCVGRC 677
Query: 666 IRSKADYGMMIFADKRYSRHDKR--SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMA 723
IR K DY + I+ADKRY +D + S +P WI+ L ++S D ++ +A+EFL KM+
Sbjct: 678 IRGKNDYAVAIYADKRYKFNDNKIISSMPQWIVDALEKRFTDISADQSITLAKEFLMKMS 737
Query: 724 QPYDKAGSI---GRKTLLSQADLEK 745
++ ++ KT+ + D+ K
Sbjct: 738 YLFNNQTNLKLQKGKTIWTLEDIHK 762
>gi|260941790|ref|XP_002615061.1| hypothetical protein CLUG_05076 [Clavispora lusitaniae ATCC 42720]
gi|238851484|gb|EEQ40948.1| hypothetical protein CLUG_05076 [Clavispora lusitaniae ATCC 42720]
Length = 439
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/436 (44%), Positives = 278/436 (63%), Gaps = 20/436 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L Y+ LG + +GL+SRKNLC++
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALVELHSLMEYRASELGYVEEFRGLGLTSRKNLCLHPT 119
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIET------------CEFFENYEKAASAA 168
V VD CR+ T ++ E N+ C F E
Sbjct: 120 VSKERKGAVVDEKCRRLTNGQLKQ-KLEQQNVSQDEMRNHSDQYGLCSFHEKLYDYDQHD 178
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
++P GVY+ + L + KQ G CPYF R M+ F N+++YSY YLLDPK+A +S+E+ K+
Sbjct: 179 LIPSGVYSFEALLDYCKQAGTCPYFTVRRMLSFCNIIIYSYHYLLDPKIAERVSRELSKD 238
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
S+V+FDEAHNIDNVCIE+LS+ + TL+ A R +++ + ++ KA D+ +L+ EY +L
Sbjct: 239 SIVIFDEAHNIDNVCIESLSLYLTDDTLKRAGRGANKLAEAVDEMKAQDSAKLQDEYEKL 298
Query: 289 VEGLALRGNL----PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLET 344
VEG LR N +++NPALP D+L+EAVPGNIR+AEHFL L+R ++YL+ R++
Sbjct: 299 VEG--LRQNEIARDEELFMANPALPQDLLEEAVPGNIRKAEHFLSFLKRFIEYLKTRMKV 356
Query: 345 ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATL 404
+V E PVSF+ + I++K LRFC ERL L+ TL++ D D+ ++ I FATL
Sbjct: 357 LHVISETPVSFLQHLKELTFIERKPLRFCSERLSLLVRTLDLADVDDLNALKDIATFATL 416
Query: 405 VGTYTRGFSIIIEPFD 420
V TY GF +I+EPF+
Sbjct: 417 VSTYDTGFQLILEPFE 432
>gi|449701609|gb|EMD42397.1| DNA repair helicase rad3/xpD, putative [Entamoeba histolytica KU27]
Length = 770
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/805 (30%), Positives = 414/805 (51%), Gaps = 114/805 (14%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKG-----HCLLEMPTGTGKTIALLSL 55
+IF + + ++FPY IYPEQY ++ + + ++EM TGTGKT+++++
Sbjct: 12 IIFTVNGIEIHFPYQFIYPEQYQFIKTVTSGVTNNKKPPHKQIIIEMGTGTGKTVSIITA 71
Query: 56 ITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
+ ++ N IYCTRT+ E+++ EL L I ++ L+SR +L
Sbjct: 72 AKGLLDNQGSNISHTIYCTRTIDEIKQIFNELTKL------------SIPSVVLASRAHL 119
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVY 175
C+ V R+ S ++ + + C ++ + E P V
Sbjct: 120 CLLDDV-------------RESKHSQLKCQEKRDKGL--CPYYHDIEDEI------PIVA 158
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK--ESVVVF 233
+ +L FGKQ CPYF +R+ + +V +Y Y+LDPKV + +M ++++VF
Sbjct: 159 GIDELVQFGKQHQRCPYFCSRNNFYKSPFIVCTYNYILDPKVENVTVGKMSDLHQTLLVF 218
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ--EIERFKATDAGRLRAEYNRLVEG 291
DEAHN+DNV ++A ++++ TLE AT +L R+ + IE K L+ EY RLVEG
Sbjct: 219 DEAHNVDNVVVDAQTLTLSLDTLELATISLVRLTKLLSIEESKKP----LKNEYKRLVEG 274
Query: 292 LALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
L R + P + + +P + + F+ ++ +V + R +L ++ K+
Sbjct: 275 L--RHSEPTKRIEE--------ENNIPIDTTTSIQFVVLMNDIVNFFREKLREAHIHKKQ 324
Query: 352 PVSFVASITAHAGIDQKTLRFCYE-------------RLHSLMLTL-------EITDTDE 391
++ SI +D FC RLH L+ L + D
Sbjct: 325 HINEHCSIPIKNIVDS----FCNSLALTPEIVSLIPLRLHLLIKALGDEYGGRQDVKGDS 380
Query: 392 FLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRF 449
F + + + DFA L+ + GFS + + + VL L C DA+ A++P+ ++F
Sbjct: 381 FYYDDLYLVADFAALLCSCQEGFSYVPDVVKMDKDNCFHSVLNLICVDAAHAIQPILNKF 440
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVV-----SRSFKMSLTRDCICPMVLTRGSDQLPV-- 502
S++ TSGTLSP+ Y +L + VV + SF S+ R ICP+ +T+G D + +
Sbjct: 441 HSIIFTSGTLSPLKTYINILGLNNVVEEKQITSSFS-SMRR--ICPLFVTKGFDSISITS 497
Query: 503 -----------------STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
S+++ R++ + +YG+L++E+ VPDGI+CFF SYSYM+
Sbjct: 498 QSSDTPGTEIKQDRILFSSQYAYRTNRLIIHSYGRLILELSKTVPDGILCFFPSYSYMNI 557
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEG 605
I+ W++ I++ I +KL+F+E+ D ET+LA NYR AC G+GA+ F V RG+++EG
Sbjct: 558 CISYWDEMKIIESIYFNKLIFVESNDSEETSLAFQNYRLACHTGKGAILFCVTRGRLSEG 617
Query: 606 IDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRV 665
I+F H R V++ G P+ + + R+EYL + I + ++L FDA+R QCVGR
Sbjct: 618 INFTNHLARAVLIIGAPYLQSEILTIKERIEYLDNKKIISKDEYLIFDAMRTCNQCVGRC 677
Query: 666 IRSKADYGMMIFADKRYSRHDKR--SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMA 723
IR K DY + I+ADKRY +D + S +P WI+ L ++S D ++ +A+EFL KM+
Sbjct: 678 IRGKNDYAVAIYADKRYKFNDNKIISSMPQWIVDALEKRFTDISADQSITLAKEFLMKMS 737
Query: 724 QPYDKAGSI---GRKTLLSQADLEK 745
++ ++ KT+ + D+ K
Sbjct: 738 YLFNNQTNLKLQKGKTIWTLEDIHK 762
>gi|71400429|ref|XP_803049.1| TFIIH basal transcription factor complex helicase subunit
[Trypanosoma cruzi strain CL Brener]
gi|70865619|gb|EAN81603.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma cruzi]
Length = 452
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/404 (45%), Positives = 272/404 (67%), Gaps = 18/404 (4%)
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD-FATLVGTYTR---- 410
++ + +D + R+ ERL LM TL+IT++ +F ++ I + TL YT
Sbjct: 1 LSKVRDECAVDIRHFRYLTERLKVLMNTLQITNSHKFRNVSLIAQMYMTLSTHYTDDRYE 60
Query: 411 --GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
GF ++ E D P +PDPV++L C DASLA++ F +++SVV+TSGTLSP+D+YP++
Sbjct: 61 KPGFVVVCEAHDPTRPAVPDPVIRLVCVDASLALREAFSKYRSVVLTSGTLSPLDIYPKI 120
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-----PVSTKFDMRSDP----GVARNYG 519
L F PV+++SF+M+L+R CI P+V+TR ++ + +++ F +R++P V+ Y
Sbjct: 121 LGFTPVIAKSFQMTLSRKCIAPVVVTRSTESVNITMEEITSSFVVRTNPLAQDIVSSAYE 180
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
LL + VPDGIVCFF Y YM E++ W+ SG LKE+ Q+KL+FIETQ V ET++AL
Sbjct: 181 DLLRGLGKTVPDGIVCFFTGYQYMGEVLLGWHRSGFLKELAQYKLIFIETQSVEETSIAL 240
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
NYR+ACD GRGA+F ++ARGK+AEGIDFDRHYGR V+MFGVPF + L R+ ++
Sbjct: 241 ANYRRACDIGRGAIFMAIARGKIAEGIDFDRHYGRAVVMFGVPFLPPNDEPLRQRICWME 300
Query: 640 DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
I ++ FDA+RQA+QC+GRV+R+K DYGMM+ D+R++ +DKR KLP WI L
Sbjct: 301 TCLGIPGNEYRNFDAMRQASQCIGRVLRNKTDYGMMLLVDRRFALNDKRKKLPIWIQQCL 360
Query: 700 RDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADL 743
++ + NLS D A+ +AR F ++MAQP++ +G TL S+ L
Sbjct: 361 KE-NTNLSVDAAIAVARGFFKEMAQPWEHKKDLG-TTLFSKETL 402
>gi|239793449|dbj|BAH72839.1| ACYPI008186 [Acyrthosiphon pisum]
Length = 325
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 166/295 (56%), Positives = 227/295 (76%)
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP 490
+ SC DAS+A+KP+ D F +V+ITSGTLSP+D+YP++LN +PV+ S M+L+R C P
Sbjct: 1 MHFSCLDASIAIKPILDYFNTVLITSGTLSPLDMYPKILNINPVIMTSLTMTLSRQCFLP 60
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
MV+ RG+DQ+ +++K++ R D VARNYG LL+EMV +VPDG+VCFF SY YM ++A W
Sbjct: 61 MVVGRGNDQVALTSKWESREDSSVARNYGHLLLEMVKVVPDGVVCFFPSYLYMKSVVAAW 120
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDR 610
D G++++I+ +KL+FIETQ++V T A+ Y +A + G+GA+ SVARGKV+EG+DFD
Sbjct: 121 YDQGLIEKILDYKLIFIETQNIVVTNHAIKCYAEAIERGKGALLLSVARGKVSEGMDFDH 180
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKA 670
HYGR VI+ G+P+ YT +IL AR+EYL +QI EGDFLTFDA+R AQCVGR IR K
Sbjct: 181 HYGRAVIVLGMPYVYTQCRILKARMEYLCSQYQISEGDFLTFDAMRHTAQCVGRAIRGKM 240
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
DYG+M+FADKR++RHDKRSKLP WI ++L D NL+ D A +A+ +LR +AQP
Sbjct: 241 DYGIMVFADKRFARHDKRSKLPKWIQAYLTDNVCNLTVDEAAQMAKRWLRYIAQP 295
>gi|429965815|gb|ELA47812.1| DNA repair helicase (rad3) [Vavraia culicis 'floridensis']
Length = 799
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 249/825 (30%), Positives = 406/825 (49%), Gaps = 149/825 (18%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M+FK++ + +YFPY I PEQ SY+ E + + +EMP G+GKTI +LS SY
Sbjct: 1 MMFKIDSIPIYFPYPTISPEQLSYIKETIASFTTTSNLFIEMPAGSGKTICILSAAVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNY-----QTRHLG---PAAKILAIGLSSR 112
L ++ ++ +YCTRTV E EKTL EL++L +Y + R+LG + K L +
Sbjct: 61 LYHMQDDIRFVYCTRTVQESEKTLFELQMLISYVKQHVKVRYLGLGLTSRKHLCVNEEVH 120
Query: 113 KNLCVNSRVLAA--------------ENRDSVD-------------------------AA 133
N+ + R L + EN D D +
Sbjct: 121 GNIEMGCRKLLSVGNCGYYDRIDHILENVDRGDDYAVHTSVEVNGEESIGELSDIMELSV 180
Query: 134 CRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP---PGVYTLQDLRAFGKQQGWC 190
+ A +P E +A+V P G+YT + ++ G+ +C
Sbjct: 181 YDDKIGDNSTKAAGSDPKTEHVNTGSENSSTNNASV-PFSFDGIYTFEQIKQKGQHFKFC 239
Query: 191 PYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVS 250
PYFL R + +N ++ +Y Y+LDPK+ I+ M ++++FDEAHNIDN C+EA S
Sbjct: 240 PYFLTRKALSSSNFLILTYNYVLDPKIKEKINLPMN--AILIFDEAHNIDNACLEAFSYE 297
Query: 251 VRRQTLEGATRNLSRINQEIER-----FKATDAGRLRAEYNRLVEGLALRGNLPNAWLSN 305
+ R + G ++ L + I+ A + + A+ +E L
Sbjct: 298 ISRSVVNGCSKGLEVMEDMIKTGSGNTVNACASHKEHADRTHDIESL------------- 344
Query: 306 PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGI 365
S ++ PGN+R+ H L +L+R++++LR +L++ ++ P +F+ S+ I
Sbjct: 345 ----STFSQKKWPGNLRKDVHVLSILKRILEFLRIKLKSTHLTINTPQNFLCSLENLTFI 400
Query: 366 DQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY--TRGFSIIIEPFDERM 423
++TL +R M+ L + + L++ + D + Y + FS++ EPF
Sbjct: 401 SRRTLSCLKKRFQ--MIKLPFDENVDKLNV--LVDMMDTLSRYAGSNAFSVVFEPFLSN- 455
Query: 424 PHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL 483
+ P L LSC+D+ +A+ + +F+S++ITSGTL+P D+Y RLL + +S +
Sbjct: 456 -NSLSPKLTLSCNDSRIAMSAL--KFKSIMITSGTLTPFDVYMRLLG---ITGKSVSIRG 509
Query: 484 TRDCICPMVLTRGSDQLPVST--------------------------------------- 504
+ + +++++G+DQ+ VS+
Sbjct: 510 STKEV--LIVSKGNDQINVSSDVSLESSKTVQIKQSNDTVPNTDAHGSTRNAGLANDFEH 567
Query: 505 -----KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
+ +R+ RNY L+ ++ +VPDG++ FF SY +M EII+ ++K++
Sbjct: 568 ALLSSSYKLRASSSTIRNYATLIKDLCDVVPDGMIIFFPSYVFMHEIISKC--EFMIKKL 625
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
HKL+FIET + E+ AL NY++A GRGA+ F VARGKV+EGIDF GR V++
Sbjct: 626 --HKLIFIETINYGESINALANYKRAIKQGRGAIMFCVARGKVSEGIDFKNEEGRCVLLI 683
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVPF +T S I+ RL++L+ + FL FDALR A QC+GRV+R K DYG+M+ AD
Sbjct: 684 GVPFAFTESVIIKERLKFLKQNINLNA--FLQFDALRHALQCLGRVVRGKNDYGLMVMAD 741
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
RY+ + + D LS DM ++I + + RKMA
Sbjct: 742 YRYNSYKYGDEY---------DVVDGLSVDMCVNIGKAYFRKMAN 777
>gi|413917668|gb|AFW57600.1| hypothetical protein ZEAMMB73_931460 [Zea mays]
Length = 194
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/191 (92%), Positives = 184/191 (96%)
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
MQHKLVFIET DVVETTLALDNYRKACDCGRGA+FFSVARGKVAEGIDFDRHYGRLVIMF
Sbjct: 1 MQHKLVFIETPDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMF 60
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
GVPFQYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD
Sbjct: 61 GVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 120
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLS 739
KRYSRHDKRSKLPGWILSHL DAHLNLSTDMALHIAREFLR+MAQPYDKAGS G+KTLL+
Sbjct: 121 KRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREFLRRMAQPYDKAGSGGKKTLLT 180
Query: 740 QADLEKMTNDG 750
+ DLE + DG
Sbjct: 181 EEDLENLAQDG 191
>gi|300706996|ref|XP_002995725.1| hypothetical protein NCER_101303 [Nosema ceranae BRL01]
gi|239604928|gb|EEQ82054.1| hypothetical protein NCER_101303 [Nosema ceranae BRL01]
Length = 476
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 296/476 (62%), Gaps = 31/476 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MI KL+++ VYFPY IYPEQ Y+ ELK +D GH L+EMP+GTGKT+ALLS+ SY+
Sbjct: 1 MIIKLDNLDVYFPYSQIYPEQLQYIKELKSNIDTNGHILIEMPSGTGKTVALLSITVSYI 60
Query: 61 LSKP---ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
+ VKL+YC+RTV E++K L EL+ L NY +++ L +GL+++K LCV
Sbjct: 61 IHMKRFFNKKVKLVYCSRTVSEIDKALYELENLINYIKQYIN--FDFLGVGLTAKKILCV 118
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
N L++ N +D C+K ++E C+F+ N K + +P GVYTL
Sbjct: 119 NDEALSSRN---IDITCKKLR------------DLEKCDFYTNLYKDFT---IPQGVYTL 160
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
L GK +G CPY++ R+ + + ++Y+Y YL+DPK+ GI+SK++ + +++FDEAH
Sbjct: 161 DKLINIGKSKGICPYYMIRNGLGMCDCIIYTYNYLIDPKIYGIVSKDLGENCIIIFDEAH 220
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL--R 295
NID+ CIEAL+ ++R TL+ ATR L I + +E K L EY ++ L +
Sbjct: 221 NIDSHCIEALTFEIKRNTLDNATRCLKTIIKLLENKKKEQHNILLKEYQKMKGTLNIYTE 280
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
+P+ + E VPGN+R + HF+ VL+RLV++ + +L+T ++ E P SF
Sbjct: 281 DTIPHFYAEEEQKF-----EFVPGNLRDSAHFVGVLKRLVEFFKTKLKTTHLTTETPASF 335
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
SI +++KTL FC +RL L+ TL+ D D ++ + DF T+V Y++GFS+I
Sbjct: 336 CQSIKDLTFLNKKTLSFCSQRLGLLVQTLDFED-DNLYFLRRVADFGTMVSMYSKGFSVI 394
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
EPFD + + +P+L+L+C D+S+A+ VF +F +V+ITSGTLSPI++YP++ F
Sbjct: 395 FEPFDTQAHTVFNPILRLACLDSSIAISQVFTKFNNVIITSGTLSPIEMYPKIFKF 450
>gi|355686451|gb|AER98062.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mustela putorius furo]
Length = 291
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 223/290 (76%)
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF 401
L ++V +E P +F++ + I +K LRFC ERL SL+ TLEI D +F + + +F
Sbjct: 1 LRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANF 60
Query: 402 ATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSP 461
ATLV TY +GF+IIIEPFD+R P I +P+L SC DASLA+KPVF+RFQSV+ITSGTLSP
Sbjct: 61 ATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSP 120
Query: 462 IDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKL 521
+D+YP++L+FHPV +F M+L R C+CPM++ RG+DQ+ +S+KF+ R D V RNYG L
Sbjct: 121 LDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNL 180
Query: 522 LVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN 581
L+EM ++VPDGIV FF SY YM+ +A+W + GIL+ I ++KL+FIETQD ET++AL+
Sbjct: 181 LLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEK 240
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
Y++AC+ GRGA+ SVARGKV+EGIDF HYGR VIMFGVP+ YT S+IL
Sbjct: 241 YQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRIL 290
>gi|76156575|gb|AAX27759.2| SJCHGC09163 protein [Schistosoma japonicum]
Length = 331
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 161/291 (55%), Positives = 225/291 (77%), Gaps = 1/291 (0%)
Query: 456 SGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVA 515
SGTLSP+++YPR+L+FHPV + SF M+L+R+C+ PM++++G+DQ+P++TKF+ R D V
Sbjct: 1 SGTLSPLEMYPRILDFHPVNTVSFTMTLSRNCVLPMIVSKGNDQVPMTTKFESREDIAVI 60
Query: 516 RNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVET 575
RNYG LL ++ ++VPDGIV FF SY Y++ ATW + I+ +I ++KL+F+ETQD ET
Sbjct: 61 RNYGHLLTQLSAVVPDGIVAFFPSYHYLESTFATWYEQHIVDQIQRYKLLFVETQDAEET 120
Query: 576 TLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARL 635
+LAL Y +AC+ GRGAV SV RG+V+EGIDFD H GR VIMFGVP+ YT S+I ARL
Sbjct: 121 SLALAAYHRACENGRGAVLLSVVRGRVSEGIDFDHHLGRCVIMFGVPYVYTQSRIFKARL 180
Query: 636 EYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
++LR+ + +K +F+TFDA+R AAQC+GR IR K+DYG+MI ADKRY+R DKR KLPGWI
Sbjct: 181 DFLREQYNVKPNEFITFDAMRHAAQCLGRAIRGKSDYGIMILADKRYARADKRFKLPGWI 240
Query: 696 LSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
S L+DA +NLS + A+ +R FLR M QP+DK +G +LL++ ++K+
Sbjct: 241 QSQLQDAFINLSIEEAVQASRRFLRLMGQPFDKDDQLG-LSLLTREHVDKL 290
>gi|123399986|ref|XP_001301577.1| helicase [Trichomonas vaginalis G3]
gi|121882775|gb|EAX88647.1| helicase, putative [Trichomonas vaginalis G3]
Length = 546
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 283/483 (58%), Gaps = 39/483 (8%)
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL-------------------E 343
S+ +P ILK+A+P +IR + F+ R+L+++L + E
Sbjct: 60 FSHRNIPEHILKKALPSSIRDFDDFIDKSRKLIRFLTSFIQGSERPTITTKAADALMHGE 119
Query: 344 TENV-----------EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEF 392
T V E+ P S + I + G+D TL E+L + ++ ++ D +++
Sbjct: 120 TNAVDAPLQTAEGETERYSPNSVLGLIYSKTGLDASTLIKMPEQLSNFIVGNKLPDYEKY 179
Query: 393 LHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSV 452
+ + +FA+L+G + +GF++ +E + PV+Q++C D + KPV FQ V
Sbjct: 180 AALVDVLEFASLIGEFDQGFTVFVENM------MQGPVMQMACLDPTFTFKPVVTHFQRV 233
Query: 453 VITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDP 512
VITSGTLSP+ YP++L F PV S F MS +R C+ P++ ++G P+++ + RS+P
Sbjct: 234 VITSGTLSPLSFYPKMLEFEPVTSAGFTMSFSRQCLLPIIASKGYMNAPLTSSYKQRSNP 293
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
VA YG LL+EM VPDGIV +F SY YM ++ W S I+ +IM++KLVFIET +
Sbjct: 294 NVAIGYGLLLLEMCKTVPDGIVAYFPSYIYMHMLLKEWMSSEIMSDIMKYKLVFIETPNA 353
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
ET L N+R +CD GRGAV VARG+V+EGIDF HYGR I+FG+P + T S ++
Sbjct: 354 EETDNTLANFRNSCDNGRGAVLLGVARGRVSEGIDFSDHYGRCCILFGLPVRNTTSIVVQ 413
Query: 633 ARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
AR +YL +K+ DFL FDA+R A+QC+GR++RSK DYG++I AD+RY+R + RS+LP
Sbjct: 414 ARADYLEKKIGVKKEDFLVFDAMRAASQCIGRLLRSKKDYGVVIMADRRYARKEVRSQLP 473
Query: 693 GWILSHLRDAHLNLS-TDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGS 751
WI L + N S TD A+ REF+ +MAQP+ I + +S+ TND
Sbjct: 474 HWINEFLDNRAANGSNTDEAIDKTREFMLQMAQPF--VLDISKLKRMSELKGTTATNDND 531
Query: 752 INE 754
E
Sbjct: 532 QKE 534
>gi|47221017|emb|CAG12711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 759
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/326 (53%), Positives = 224/326 (68%), Gaps = 37/326 (11%)
Query: 458 TLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARN 517
TLSP+D+YP++L+F PV SF M+L R C+CP+++ RG+DQ+ +S+KF+ R D V RN
Sbjct: 423 TLSPLDIYPKILDFRPVTMASFTMTLARTCLCPLIIGRGNDQVALSSKFETREDFAVIRN 482
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS------------------------ 553
YG LL+EM SIVPDGIV FF SY YM+ I+A+W +
Sbjct: 483 YGNLLLEMSSIVPDGIVAFFTSYVYMENIVASWYEQVSVHRRISVCNTACTQIKAYFVFF 542
Query: 554 -GILKEIMQHKLVFIETQDVVETTLALDNYR-----------KACDCGRGAVFFSVARGK 601
GIL+ I ++KL+FIET D ET++AL+ Y+ +AC+ GRGA+ SVARGK
Sbjct: 543 KGILENIQKNKLIFIETPDAAETSMALEKYQEVRDRCHDGHLRACENGRGAILLSVARGK 602
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQC 661
V+EGIDF H+GR VIMFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQC
Sbjct: 603 VSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDHFQIRENDFLTFDAMRHAAQC 662
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
VGR IR K DYG+MIFADKRY+R DKR KLP WI H+ D LNL+ D A+ +++ FLR+
Sbjct: 663 VGRAIRGKTDYGLMIFADKRYARMDKRGKLPRWIQEHISDGSLNLTLDEAVQLSKHFLRQ 722
Query: 722 MAQPYDKAGSIGRKTL-LSQADLEKM 746
MAQP+ + +G L L Q + E+M
Sbjct: 723 MAQPFRQEDQLGLSLLTLEQLESEEM 748
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/369 (45%), Positives = 225/369 (60%), Gaps = 52/369 (14%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
++ + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y +
Sbjct: 2 LNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKA 61
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
P KLIYC+RTV E+EK + EL+ L Y T+ G LA+ LSSRKNLC++ V
Sbjct: 62 FPLEVTKLIYCSRTVPEIEKVVEELRKLLEYYTKQTGENNNFLALALSSRKNLCIHPEVS 121
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFE----------------------- 159
A VD C TAS++RA + N+ C FFE
Sbjct: 122 ALRFGKEVDGKCHSLTASYIRAQRHSDSNVPACRFFEVRPFLVSKTLTLEKCSQTVQTEI 181
Query: 160 ---------------------NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHM 198
+++ LP G+Y L DL+ FG+++GWCPY+LAR+
Sbjct: 182 LLEKKGPNCSNLPPRGALCLQDFDAVGRQVPLPAGIYNLDDLKDFGRRKGWCPYYLARYS 241
Query: 199 VQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
+ AN+VVYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNIDNVCI+++SV++ R+TL+
Sbjct: 242 ILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDR 301
Query: 259 ATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP---NAWLSNPALPSDILKE 315
N+ + + I + K TDA +L+ EY RLVEGL N+ + +LSNP LP +IL+
Sbjct: 302 CQGNVDTLQRTIHKIKETDAAKLKEEYRRLVEGLK-EANIARETDVYLSNPVLPDEILQ- 359
Query: 316 AVPGNIRRA 324
G+ RRA
Sbjct: 360 ---GSARRA 365
>gi|260941788|ref|XP_002615060.1| hypothetical protein CLUG_05075 [Clavispora lusitaniae ATCC 42720]
gi|238851483|gb|EEQ40947.1| hypothetical protein CLUG_05075 [Clavispora lusitaniae ATCC 42720]
Length = 315
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 200/262 (76%), Gaps = 2/262 (0%)
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLV 523
+YP++LNF V+ S+ M+L R PM++T+GSDQ +S++F++R+DP V RNYG LL+
Sbjct: 1 MYPKMLNFQTVIQESYTMTLARRSFLPMIVTKGSDQTSISSRFEIRNDPSVVRNYGSLLI 60
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR 583
E I PDG+V FF SY YM+ II+ W G+L E+ ++KL+ +ET D ET LAL+ YR
Sbjct: 61 EFSKITPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKYKLILVETPDAQETALALETYR 120
Query: 584 KACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ 643
KAC GRGAV SVARGKV+EGIDFD HYGR V+M G+PFQYT S+IL ARLE+LRD +Q
Sbjct: 121 KACSNGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDHYQ 180
Query: 644 IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
IKE DFL+FDA+R AAQC+GRV+R K DYG+M+ AD+R+ +K+++LP WI L ++
Sbjct: 181 IKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRF--KNKKNQLPKWIAQALLESD 238
Query: 704 LNLSTDMALHIAREFLRKMAQP 725
LNLSTDMAL A++FLR +AQP
Sbjct: 239 LNLSTDMALAAAKKFLRTLAQP 260
>gi|209736390|gb|ACI69064.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 319
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/297 (53%), Positives = 210/297 (70%), Gaps = 3/297 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M +E + VYFPYD IYPEQYSYMLELKR LDAKGH +LEMP+GTGKTI+LLSLI +Y
Sbjct: 1 MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
P KLIYC+RTV E+EK + EL+ L + ++ G ILA+ LSSRKNLCV+
Sbjct: 61 REYPLEVTKLIYCSRTVPEIEKVVEELRKLVEFYSKETGEKNNILALALSSRKNLCVHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + VD C TAS++RA NP++ +C F+E ++ LP GVY L DL
Sbjct: 121 VSSLRFGKEVDGKCHSLTASYIRAQRQSNPSLPSCRFYEEFDAMGKQVPLPAGVYNLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ FG+++GWCPY+LAR+ + AN++VYSY YLLDPK+A ++SKE+ K+SVVVFDEAHNID
Sbjct: 181 KDFGRRKGWCPYYLARYSILHANIIVYSYHYLLDPKIADLVSKELSKKSVVVFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVE---GLAL 294
NVCI+++SV++ R+TL+ + N+ + I + K TDA +L+ EY RLVE GL+L
Sbjct: 241 NVCIDSMSVNITRRTLDRSQANVETLQNTILKIKETDAAKLKEEYRRLVEDQLGLSL 297
>gi|167377495|ref|XP_001734418.1| DNA repair helicase rad3/xp-D [Entamoeba dispar SAW760]
gi|165904069|gb|EDR29430.1| DNA repair helicase rad3/xp-D, putative [Entamoeba dispar SAW760]
Length = 680
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 219/703 (31%), Positives = 358/703 (50%), Gaps = 96/703 (13%)
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
++ L+SR +LC+ V R + + + E + C ++ + E
Sbjct: 3 SVVLASRAHLCLLDDV---------------RESKHSQLMCQEKRDKGLCPYYHDIEDEI 47
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
P + + +L FGKQ CPYF +R+ + +V +Y Y+LDPKV + +M
Sbjct: 48 ------PIIAGIDELVQFGKQYQRCPYFCSRNNFYKSPFIVCTYNYILDPKVENVTVGKM 101
Query: 226 QK--ESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGR--L 281
++++VFDEAHN+DNV ++A ++++ TLE AT +L+R++ + + +A + L
Sbjct: 102 SDLHQTLLVFDEAHNVDNVVVDAQTLTLSLDTLELATISLNRLS----KLLSIEASKRPL 157
Query: 282 RAEYNRLVEGLALRGNLP-------NAWLSNPALPSDILKEA-VPGNIRRAEHFLHVLRR 333
EY RLVEGL L SN I +E +P + + F+ +++
Sbjct: 158 ENEYKRLVEGLK-HSELTKETEEERQKLFSNKKTTKRIEEENDIPIDTITSIQFVILMKG 216
Query: 334 LVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTL--RFCYE-------------RLH 378
+V + R +L +E P+ I H I K++ FC RLH
Sbjct: 217 IVNFFREKL------REAPIHKKQHINEHHSIPIKSVVDSFCDSLALTPEIVSLIPLRLH 270
Query: 379 SLMLTL-------EITDTDEFLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDP 429
L+ L + D F + + + DFA L+ + GFS + + +
Sbjct: 271 LLIKALGDEYGGRQDVKGDSFYYDDLYLVADFAALLCSCQEGFSYVPDVVKMDKDNCFHC 330
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR---SFKMSLTRD 486
VL L C DA+ A++P ++F S+V TSGTLSP+ Y +L + VV + S TR
Sbjct: 331 VLNLICVDAANAIQPTLNKFHSIVFTSGTLSPLKTYINILGLNNVVEEKQITSSFSNTRR 390
Query: 487 CICPMVLTRGSDQLPV-------------------STKFDMRSDPGVARNYGKLLVEMVS 527
ICP+ +T+G D + + S+++ RS+ + +YG+L+VE+
Sbjct: 391 -ICPLFVTKGFDSISITSQTPDTSGTEVKQDRILFSSQYTYRSNRLIIHSYGRLIVELSK 449
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
VPDGI+CFF SYSYM+ I+ W++ I++ I +KL+F+E+ D ET+LA NYR AC
Sbjct: 450 TVPDGILCFFPSYSYMNICISYWDEMKIIESIYLNKLIFVESNDGEETSLAFQNYRLACH 509
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
G+GA+ F V RG+++EGI+F H R V++ G P+ + + R+EYL + I +
Sbjct: 510 TGKGAILFCVTRGRLSEGINFTNHLARAVLIIGAPYLQSEILTIKERIEYLDNKKVISKD 569
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR--SKLPGWILSHLRDAHLN 705
D+L FDA+R QCVGR IR K DY + I+ADKRY +D + S +P WI+ L +
Sbjct: 570 DYLIFDAMRTCNQCVGRCIRGKNDYAVAIYADKRYRFNDSKIISSMPQWIVDALEKRFTD 629
Query: 706 LSTDMALHIAREFLRKMAQPYDKAGSIGR---KTLLSQADLEK 745
+S D ++ + +EFL M+ ++ ++ KT+ + D+ K
Sbjct: 630 ISADQSIKLTKEFLMNMSYLFNNQPNLKSQKGKTIWTLEDIHK 672
>gi|312098951|ref|XP_003149208.1| TFIIH basal transcription factor complex helicase subunit [Loa loa]
Length = 347
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 169/350 (48%), Positives = 235/350 (67%), Gaps = 7/350 (2%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTL 84
M ELK+ LDA+GHCLLEMP+GTGKT++LLSL+ +Y+L P++ KL+YC+RT+ E+EK +
Sbjct: 1 MGELKKTLDAQGHCLLEMPSGTGKTVSLLSLVVAYMLRFPDHLDKLVYCSRTIPEIEKCV 60
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ L Y + G + A+ LS+RKNLC+N V + VD AC+K TAS+VRA
Sbjct: 61 EELRNLFKYYEQCDGKPPSLFAVALSARKNLCINESVSSLRQGSLVDGACQKLTASFVRA 120
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
P++ C FFE ++ L GVY LQ+LR G+Q G CPYFL+R++V A++
Sbjct: 121 KRKLRPDLPCCTFFEKLDEQEDFNHLD-GVYNLQNLRKLGQQNGICPYFLSRNVVDRAHI 179
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
VVYSY Y+LDPK+A ++SK + S VVFDEAHNIDNVCIE++SVS+ + T+E AT+ L
Sbjct: 180 VVYSYHYILDPKIAELVSKNFSRHSCVVFDEAHNIDNVCIESMSVSLTKTTVEKATQKLG 239
Query: 265 RINQEIERFKATDAGRLRAEYNRLVEGLAL----RGNLPNAWLSNPALPSDILKEAVPGN 320
+ + ++R + ++ +LR EY+RLVEGL R N + L+NP LP ILKEAVPG
Sbjct: 240 ILEEHVQRLREENSEQLRVEYDRLVEGLKRVEEERTN--DQVLANPVLPDMILKEAVPGT 297
Query: 321 IRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTL 370
IR A HF+ LRR +YL+ R+ T+ V E P +F+ I ID++ L
Sbjct: 298 IRNALHFISFLRRFNEYLKHRMRTKTVLIENPAAFLRDINDLMHIDRRPL 347
>gi|269860969|ref|XP_002650201.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|220066375|gb|EED43859.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 728
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/754 (26%), Positives = 375/754 (49%), Gaps = 82/754 (10%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIF++ + +YFPY +I+P + Y+ + K H ++E+P+ +T+ALLS SY
Sbjct: 1 MIFEINSIPIYFPYASIHPSEIEYITTMLMQFQKKDHFIIEIPSEIYRTLALLSSAVSYS 60
Query: 61 LSKPEN--PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
+ N P K+IYC R + ++ LK+L Y + K + I L +N
Sbjct: 61 IYCKNNGRPYKIIYCVRDDSDTSSIISNLKVLIAYINN--ITSTKFIGIELP------IN 112
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFF--ENYEKAASAAVLPPGVYT 176
+ D D EN NI+ F +N+ GVYT
Sbjct: 113 NIF------DMWDVY--------------ENINIDVSNKFILDNF----------VGVYT 142
Query: 177 LQDLRAFGKQQG--WCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++ F ++ W F + + + VV++Y YLLDP + I+ +Q + V+F+
Sbjct: 143 FNEMLEFSQKNNIHWLTMF--QTTLHHCDFVVFAYNYLLDPGLYSIVYHSLQSTANVIFE 200
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL 294
+ID+ C + +++ + R LE A ++L + ++R ++ + L + V G+
Sbjct: 201 NGWDIDHQCTKIINLKITRPLLESAYQSLEWLEMTLDRNESMLSDILLKS--QKVNGIG- 257
Query: 295 RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
+ +P + +N L S E +PGN+R + H + + +RL+++L+ +L+ +
Sbjct: 258 KNEIP--YYAN-NLNSPFYYEYIPGNMRSSIHTVKLFKRLIEFLKIKLKVQQPYTMSLKE 314
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
F+ + ID +L+FC +RL ++ L + TD +++ + FATL+ Y+ GF +
Sbjct: 315 FINEMADLVFIDAHSLKFCSQRLGIVLRDLHVAQTD-MCNLKIVSRFATLIAIYSDGFQM 373
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPV 474
+ E P++QL C D S ++P+F +F +V+IT G L D+Y ++L
Sbjct: 374 AFNHYTEYDTQYT-PIIQLFCIDPSKVLQPIFSKFHTVMITVGALVFSDIYLKILGIKIN 432
Query: 475 VSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS------------------------ 510
+ K ++ I +++T+G DQ+ + K ++
Sbjct: 433 HAYILKSDDKKNNIASLIITKGDDQILLENKIIYKACESNNMLNTQCKTSLSTIITDSTI 492
Query: 511 --DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE 568
D + RNYG L++ + +VPD I+ F SY ++++II W+++G ++ ++++KL+F+E
Sbjct: 493 NIDSSIIRNYGNLILNLSKVVPDNIIVIFPSYFHINKIINEWDETGFIRNLLENKLIFVE 552
Query: 569 TQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
T + E T+ + N++ ACD GRGA+ FS K E +DF Y R +++ GVP+ +T++
Sbjct: 553 TTNYKEKTVIMQNFKIACDNGRGAILFSTFENKNLEELDFLHGYNRSLVVIGVPYIWTIN 612
Query: 629 KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
L +L+Y + + I E DF+ FD +R +Q + + + K DY +IF D + + +
Sbjct: 613 FCLQCKLQYFKTEYNINEYDFIHFDIIRTISQYLNMMFKRKDDYSSVIFVDFYFFQ--QL 670
Query: 689 SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
S P W+ + +H LS +M I ++F R++
Sbjct: 671 SNFPQWVQQKIPSSHTELSVEMGTCIIKQFFREI 704
>gi|258563374|ref|XP_002582432.1| DNA repair helicase RAD3 [Uncinocarpus reesii 1704]
gi|237907939|gb|EEP82340.1| DNA repair helicase RAD3 [Uncinocarpus reesii 1704]
Length = 474
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 215/318 (67%), Gaps = 25/318 (7%)
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEG 291
VFDEAHNIDNVCIEALS+ + +L A+R + + ++I+ K +DA +L+ EY +LVEG
Sbjct: 10 VFDEAHNIDNVCIEALSIDITEDSLRKASRGANNLERKIDEMKRSDADKLQREYEKLVEG 69
Query: 292 L--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEK 349
L A + + ++NPALP D+LKEAVP NIRRAEHF+ L+R ++YL+ R++
Sbjct: 70 LREADQAREEDQLMANPALPDDLLKEAVPRNIRRAEHFVAFLKRFIEYLKTRMK------ 123
Query: 350 EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYT 409
+K LRFC ERL SL+ TLE+ + +++ +Q + FATL TY
Sbjct: 124 -----------------RKPLRFCAERLTSLVRTLELMNIEDYQPLQEVATFATLTATYE 166
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL 469
+GF +I+EPF+ +P+P+L +C DA++A+KPVFDRF SV+ITSGTLSP+++YP++L
Sbjct: 167 KGFLLILEPFESEAATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKML 226
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
F V+ S+ M+L R PM++TRGSDQ +S+ F +R+DPGV RNYG LL+E I
Sbjct: 227 EFTTVLQESYSMTLARRSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRIT 286
Query: 530 PDGIVCFFVSYSYMDEII 547
PDGIV FF SY YM+ II
Sbjct: 287 PDGIVVFFPSYLYMESII 304
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 687 KRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEK 745
KR++LP WI ++ ++ NLSTDMA+ A+ FLR MAQP+ G T S ADLE+
Sbjct: 364 KRNQLPKWIAQNMLESETNLSTDMAVATAKNFLRTMAQPFKNKDQEGIST-WSLADLER 421
>gi|55845886|gb|AAV66966.1| excision repair cross-complementing 2 [Canis lupus familiaris]
Length = 276
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/275 (54%), Positives = 206/275 (74%), Gaps = 2/275 (0%)
Query: 211 YLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI 270
YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV++ R+TL+ NL + + +
Sbjct: 1 YLLDPKIAELVSKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQGNLETLQKTV 60
Query: 271 ERFKATDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFL 328
R K TD RLR EY RLVEGL A +A L+NP LP ++L+EAVPG+IR AEHFL
Sbjct: 61 LRIKETDEQRLREEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIRTAEHFL 120
Query: 329 HVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITD 388
LRRL++Y++ RL ++V +E P +F++ + I +K LRFC ERL SL+ TLEI D
Sbjct: 121 GFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIAD 180
Query: 389 TDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR 448
+F + + +FATLV TY +GF+IIIEPFD+R P I +P+L SC DASLA+KPVF+R
Sbjct: 181 LADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFER 240
Query: 449 FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL 483
FQSV+ITSGTLSP+D+YP++L+FHPV +F M+L
Sbjct: 241 FQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTL 275
>gi|238584800|ref|XP_002390673.1| hypothetical protein MPER_10013 [Moniliophthora perniciosa FA553]
gi|215454360|gb|EEB91603.1| hypothetical protein MPER_10013 [Moniliophthora perniciosa FA553]
Length = 343
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 138/222 (62%), Positives = 181/222 (81%)
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+++F++R+DP V RN+G +LVE IVPDGIV FF SY YM+ I+A WND GIL E+ +H
Sbjct: 35 NSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSYLYMESIVAAWNDMGILNEVWKH 94
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
KL+F+ET D ET++AL+NYR+ACD GRGAV SVARGKV+EGIDFD +YGR VIMFGVP
Sbjct: 95 KLIFVETPDANETSIALENYRRACDNGRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGVP 154
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+QYT S+IL ARLEYLRD ++I+E +FL FDA+R AAQCVGRV+R K D+G+M+FADKR+
Sbjct: 155 YQYTESRILKARLEYLRDAYRIRESEFLGFDAMRNAAQCVGRVLRGKTDWGLMVFADKRF 214
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
+R DKR+KLP WI ++ + NLSTDMAL +++ F+R ++Q
Sbjct: 215 ARADKRAKLPRWINQYITETASNLSTDMALTLSKLFMRTISQ 256
>gi|401412199|ref|XP_003885547.1| hypothetical protein NCLIV_059440 [Neospora caninum Liverpool]
gi|325119966|emb|CBZ55519.1| hypothetical protein NCLIV_059440 [Neospora caninum Liverpool]
Length = 1080
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 256/437 (58%), Gaps = 58/437 (13%)
Query: 303 LSNPALPSD-ILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITA 361
L++P LP D +L++AVPG+IR+AEHF+ ++RR+V YL+ ++ ++ EGP+SF+
Sbjct: 618 LASPLLPEDALLEQAVPGSIRKAEHFIALMRRIVSYLKSYIKIYELKSEGPLSFLHMFEK 677
Query: 362 HAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDE 421
ID L+F Y+RL SL TL+IT+ + + + + DF TLV TY GF +I +P+ E
Sbjct: 678 ETHIDASLLKFFYDRLKSLFNTLQITEVESYAPLTLVADFCTLVATYCEGFILICDPYPE 737
Query: 422 RMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVIT-SGTLSPIDLYPRLLNFHPVVSRSFK 480
+ + DP+LQLSC DASLA++PV RFQ + + P L P+L
Sbjct: 738 AV-GLYDPLLQLSCLDASLAMQPVLKRFQLLSASFVFAWRPRPLTPQLPQ---------S 787
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
+ LT I P+ L Y KLL +V + ++ F ++
Sbjct: 788 LILTSGTISPLEL------------------------YPKLLNFVVGLFCACVLSVFNAW 823
Query: 541 ----SYMDEIIATWNDSGILK----EIMQHKLVFIETQDVVETTLALDNYRKACDC---- 588
++ DS L+ H++V DV L L + DC
Sbjct: 824 PLWRAFTLSRAPERQDSQFLRGGILTARHHRVV----PDVSGPQLHL-----SVDCRPRL 874
Query: 589 -GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
+ F GKVAEGIDFDRH+GR V++FGVPFQYTLS++L ARL+++R+ +QI +
Sbjct: 875 RSDPSDFQVRIPGKVAEGIDFDRHFGRCVVLFGVPFQYTLSRVLKARLDFIREQYQIPDN 934
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
+FLTFDA+RQAAQCVGRVIRSK DYG+MIFAD RYSR DKRSKLP WIL HL +AHL L+
Sbjct: 935 EFLTFDAMRQAAQCVGRVIRSKNDYGLMIFADARYSRIDKRSKLPPWILKHLDNAHLALN 994
Query: 708 TDMALHIAREFLRKMAQ 724
T+ A+ +AR FLR M+Q
Sbjct: 995 TETAISVARTFLRHMSQ 1011
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 47/188 (25%)
Query: 155 CEFFENYEKAASAAVLPPGVYTLQDLRA---------FGKQQGWCPYFLARHMVQFANVV 205
C ++EN ++ + P GVYT+++L+ ++ +CPYFLAR ++ ANVV
Sbjct: 303 CAWYENLDRYFAPQFFPAGVYTIEELKVASANWRHPLLDRKLPFCPYFLARRLLHIANVV 362
Query: 206 VYSYQYLLDPKVA-------------------------------------GIISKEMQKE 228
V +YQY+LDPKV+ G ++E+Q E
Sbjct: 363 VLNYQYILDPKVSQAALLTPLPDGISSSHTAGAQSRSTYTNPYQNRGLGRGPGTEEVQYE 422
Query: 229 -SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNR 287
SVVVFDEAHNIDNVCIEALSV++ R +E A RNLS++ ++IE K DA RLR EY
Sbjct: 423 GSVVVFDEAHNIDNVCIEALSVNINRSVMEAALRNLSQLAEKIEEVKKEDAERLREEYEN 482
Query: 288 LVEGLALR 295
LV GL R
Sbjct: 483 LVRGLKRR 490
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F++++VTVYFPYD IYPEQY+Y+ LK+ LDAKGH +LEMPTGTGKT+ALLSL+TSY
Sbjct: 2 VVFQIDEVTVYFPYDFIYPEQYAYIRALKQTLDAKGHAVLEMPTGTGKTVALLSLLTSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL 98
L+ P K++YCTRTV EMEK L ELK + +Y+ +
Sbjct: 62 LTHPRL-GKILYCTRTVPEMEKALLELKGVIDYRIEEI 98
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA--LAAENP 150
IL +GLS+R+N+C+N V +R+ +D ACR+ TA WVR L + NP
Sbjct: 182 ILGVGLSARRNMCINPAVYNQPDREKIDEACRQLTAPWVRQSHLTSYNP 230
>gi|407039328|gb|EKE39586.1| DNA repair helicase, putative [Entamoeba nuttalli P19]
Length = 563
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 305/573 (53%), Gaps = 78/573 (13%)
Query: 228 ESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ--EIERFKATDAGRLRAEY 285
++++VFDEAHN+DNV ++A ++++ TLE AT +L R+ + IE K L+ EY
Sbjct: 6 QTLLVFDEAHNVDNVVVDAQTLTLSLDTLELATISLVRLTKLLSIEESKKP----LKNEY 61
Query: 286 NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETE 345
RLVEGL R + P + + +P + + F+ +++ +V + R +L
Sbjct: 62 KRLVEGL--RHSEPTKRIEE--------ENNIPIDTITSIQFVVLMKDIVNFFREKL--- 108
Query: 346 NVEKEGPVSFVASITAHAGIDQKTL--RFCYE-------------RLHSLMLTL------ 384
+E P+ I H I K + FC RLH L+ L
Sbjct: 109 ---REAPIHKKQHINEHCSIPIKNVVDSFCDSLALTPEVVTLIPLRLHLLIKALGDEYGG 165
Query: 385 -EITDTDEFLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
+ D F + + + DFA L+ + GFS + + + VL L C DA+ A
Sbjct: 166 RQDVKGDSFYYDDLYLVADFAALLCSCQEGFSYVPDVVKMDKDNCFHSVLNLICVDAANA 225
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV-----SRSFKMSLTRDCICPMVLTRG 496
++P ++F S+V TSGTLSP+ Y +L + VV + SF S+ R ICP+ +T+G
Sbjct: 226 IQPTLNKFHSIVFTSGTLSPLKTYINILGLNNVVEEKQITSSFS-SMRR--ICPLFVTKG 282
Query: 497 SDQLPV-------------------STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
D + + S+++ RS+ + +YG+L++E+ VPDGI+CFF
Sbjct: 283 FDSISITSQSSDTSGSEIKQDRILFSSQYAYRSNRLIIHSYGRLILELSKTVPDGILCFF 342
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
SYSYM+ I+ W++ I++ I +KL+F+E+ D ET+LA NYR AC G+GA+ F V
Sbjct: 343 PSYSYMNICISYWDEMKIIESIYFNKLIFVESNDSEETSLAFQNYRLACHTGKGAILFCV 402
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
RG+++EGI+F H R V++ G P+ + + R+EYL + I + ++L FDA+R
Sbjct: 403 TRGRLSEGINFTNHLARAVLIIGAPYLQSEILTIKERIEYLDNKKIISKDEYLIFDAMRT 462
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKR--SKLPGWILSHLRDAHLNLSTDMALHIA 715
QCVGR IR K DY + I+ADKRY +D + S +P WI+ L ++S D ++ +A
Sbjct: 463 CNQCVGRCIRGKNDYAVAIYADKRYKFNDNKIISSMPQWIVDALEKRFTDISADQSITLA 522
Query: 716 REFLRKMAQPYDKAGSI---GRKTLLSQADLEK 745
+EFL KM+ ++ ++ KTL + D+ K
Sbjct: 523 KEFLMKMSYLFNNQTNLKLQKGKTLWTLEDIHK 555
>gi|390367539|ref|XP_784080.2| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like, partial [Strongylocentrotus purpuratus]
Length = 272
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 189/272 (69%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V+FPYD IYPEQ+ YM+ELK+ LDAKGH +LEMP+GTGKT++LL+LI +Y+
Sbjct: 1 MKVNVDGLLVHFPYDYIYPEQFMYMMELKKLLDAKGHGVLEMPSGTGKTVSLLALIVAYI 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L +Y G + + LSSRKNLC++
Sbjct: 61 QANPHELTKLIYCSRTVPEIEKAVEELRRLLDYIEEQTGEKPNFVGLALSSRKNLCIHPE 120
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V VD+ C TAS++R +P + C+F+E ++ A + + PG Y+L DL
Sbjct: 121 VSKERIGKVVDSKCHSLTASYIRERRKHDPAVPICDFYEEFDAAGRDSPIEPGAYSLDDL 180
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
+ G+Q GWCPYFLAR+ + AN++VYSY YLLDPK+A +SKE+ K+S V+FDEAHNID
Sbjct: 181 KEIGRQNGWCPYFLARYTITHANIIVYSYHYLLDPKIAEQVSKELSKQSAVIFDEAHNID 240
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIER 272
NVCIE++SV++ R+TL+ + +NL + + I R
Sbjct: 241 NVCIESMSVNISRKTLDKSNQNLDSLTRHINR 272
>gi|123451564|ref|XP_001313959.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121895940|gb|EAY01107.1| hypothetical protein TVAG_442190 [Trichomonas vaginalis G3]
Length = 752
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 203/744 (27%), Positives = 344/744 (46%), Gaps = 48/744 (6%)
Query: 4 KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK 63
++ D+ V FPY IY EQ S M ++K +LDA+G + E P G GK IA+ S+ Y LSK
Sbjct: 12 QIVDLQVIFPYRMIYSEQKSLMEQIKLSLDARGPFVFETPPGIGKLIAVFSIYLEY-LSK 70
Query: 64 PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVL 122
+ ++Y T T + +++ + P K I AI L S+ C+N V
Sbjct: 71 HPDIGPIVYSTDTYQSYLRAFEAFQIVVKAREADPDPFNKSITAISLGSKHFQCINKTV- 129
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+ D ++ C T SW R C++F N + ++
Sbjct: 130 --KESDDIEDLCFNNTCSWSRT---------HCDYFGNVPDQYQR------INSIDSFNE 172
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
F K+ CPY+ +R ++ V+ S LL+PK I + + + +FD +H +D V
Sbjct: 173 FCKECNACPYYASRAILHNFKVIFISNSELLNPKSPSRILQRLPDTASFIFDNSHYLDKV 232
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALR------- 295
C + LS + LE A R L + + +E K + + + +Y + +G+ ++
Sbjct: 233 CCDNLSSYLTLPLLEQAKRELDNLKKRVESTK--NDQKSQDQYENVAKGIKIQDILDLGP 290
Query: 296 --------GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
G + + P +PS + G + +HFL + L+++L L ++
Sbjct: 291 KVKIPEQDGYVYSTKFMIPIVPSHQTNRNICGTLWNMDHFLFRVDYLLKFLVNLLPCDSE 350
Query: 348 E---KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATL 404
+ K + + + L F RL + + I EF + + +F +L
Sbjct: 351 QTFTKYSSTELLTLMYQEIFTEPLALYFMGPRLSYYIASEGIDQVQEFAPLYAVFNFCSL 410
Query: 405 VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
+ TY SI+ + + H+P LQLSCHDASLA + D+FQ+ ITS L
Sbjct: 411 LATYNESLSIVADFKNPIEAHVPIASLQLSCHDASLAFSMITDKFQNFFITSSALLVPGF 470
Query: 465 YPRLLNFHPVVSRSFKMSLTRD-----CICPMVLTRGSDQLP-VSTKFDMRSDPGVARNY 518
+P LL F P+ S RD + M ++ G+DQ V + D+ ++ G+ RN
Sbjct: 471 FPVLLGFKPLSQIGMVYS-PRDEKGNYNLNIMTISHGNDQQSLVCSPNDVTTNIGIVRNI 529
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
LL+E PDG+V FF S+ ++ I+ W ++ +++ +KL+FIE D ++ +L
Sbjct: 530 MALLIESSKATPDGMVVFFPSFKVLNTIVTKWRNTNQQVDLLNNKLIFIEQPDPMKASLL 589
Query: 579 LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
LD++ ++ D RG + VA G VA+ +D H+ R I +G P T + + R +YL
Sbjct: 590 LDSFYRSLDNMRGGILMCVAGGIVADALDLSNHHCRTAIAYGFPMMETYNDTVELRADYL 649
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK-LPGWILS 697
FQ F+ +++LR + ++ SK+D+ ++ ADKRYS + ++ LP W+
Sbjct: 650 DKYFQFPTTKFIKWNSLRNVIASLDTILSSKSDFATILLADKRYSESEILNELLPAWMQK 709
Query: 698 HLRDAHLNLSTDMALHIAREFLRK 721
L + A R+F K
Sbjct: 710 ILTPDTTGQGVEEAKETMRKFFYK 733
>gi|300122780|emb|CBK23797.2| unnamed protein product [Blastocystis hominis]
Length = 376
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 209/329 (63%), Gaps = 36/329 (10%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
VL+L C DA ++P+F F+ ++ITSGTLS +DLYP+LL FHP+V++S + +C
Sbjct: 23 VLKLICCDAGYVMQPLFTAFKHIIITSGTLS-LDLYPKLLQFHPLVAKSICIDRNSH-LC 80
Query: 490 PMVLTRGSDQ-------------------------LPVSTKFDMRSDPGVARNYGKLLVE 524
P+V++RG+DQ + +S+K+ +R++ VA +YG LLVE
Sbjct: 81 PVVVSRGNDQGRMTVTNAMEVPDTKPSSSLSAKSDVKLSSKYTLRANNQVAVSYGSLLVE 140
Query: 525 MVSIVPDGIVCFFVSYSYMDE---------IIATWNDSGILKEIMQHKLVFIETQDVVET 575
M +VPDGI+CFF SYS++ + W+ G++++I +KL++IE++D+ E+
Sbjct: 141 MARVVPDGIICFFTSYSHISNPFLIWNRCLFLCEWDAHGVIRDIYNYKLLYIESRDINES 200
Query: 576 TLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARL 635
+A+ NYRK+CD G+GAV V RG ++EG+ F+ HYGR I+ GVPF TLSK L +
Sbjct: 201 NVAVQNYRKSCDEGKGAVLLCVVRGHISEGVHFNDHYGRCCILMGVPFLNTLSKELNQKC 260
Query: 636 EYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
EYLR + + + D+ DA+RQ+AQCVGR IR+K DY +IFAD RY D S+LP WI
Sbjct: 261 EYLRYQYDVDKNDYQICDAIRQSAQCVGRTIRNKNDYSFVIFADYRYDLVDHSSRLPEWI 320
Query: 696 LSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
L AH NLS +MA+ AR F +KMA+
Sbjct: 321 QQQLPPAHHNLSVEMAVITARTFFKKMAR 349
>gi|300175036|emb|CBK20347.2| unnamed protein product [Blastocystis hominis]
Length = 376
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 209/329 (63%), Gaps = 36/329 (10%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
VL+L C DA ++P+F F+ ++ITSGTLS +DLYP+LL FHP+V++S + +C
Sbjct: 23 VLKLICCDAGYVMQPLFAAFKHIIITSGTLS-LDLYPKLLQFHPLVAKSICIDRNSH-LC 80
Query: 490 PMVLTRGSDQ-------------------------LPVSTKFDMRSDPGVARNYGKLLVE 524
P+V++RG+DQ + +S+K+ +R++ VA +YG LLVE
Sbjct: 81 PVVVSRGNDQGRMTVTNAMEVPDTKPSSSLSAKSDVKLSSKYTLRANNQVAVSYGSLLVE 140
Query: 525 MVSIVPDGIVCFFVSYSYMDE---------IIATWNDSGILKEIMQHKLVFIETQDVVET 575
M +VPDGI+CFF SYS++ + W+ G++++I +KL++IE++D+ E+
Sbjct: 141 MARVVPDGIICFFTSYSHISNPFLIWNRCLFLCEWDAHGVIRDIYNYKLLYIESRDINES 200
Query: 576 TLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARL 635
+A+ NYRK+CD G+GAV V RG ++EG+ F+ HYGR I+ GVPF TLSK L +
Sbjct: 201 NVAVQNYRKSCDEGKGAVLLCVVRGHISEGVHFNDHYGRCCILMGVPFLNTLSKELNQKC 260
Query: 636 EYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
EYLR + + + D+ DA+RQ+AQCVGR IR+K DY +IFAD RY D S+LP WI
Sbjct: 261 EYLRYQYDVDKNDYQICDAIRQSAQCVGRTIRNKNDYSFVIFADYRYDLVDHSSRLPEWI 320
Query: 696 LSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
L AH NLS +MA+ AR F +KMA+
Sbjct: 321 QQQLPPAHHNLSVEMAVITARTFFKKMAR 349
>gi|78190825|gb|ABB29734.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH [Monosiga brevicollis]
Length = 207
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 163/207 (78%)
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
IEP+D+R P +PDPVL+ +C DASLAVKPVFDRFQSV+ITSGTLSP+D+YP++LNF PV
Sbjct: 1 IEPYDDRAPSVPDPVLRFTCMDASLAVKPVFDRFQSVIITSGTLSPLDMYPKILNFRPVT 60
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
SF M+L+R + P+V+TR +DQ P+ST+++ R V R YG LL+++ S VPDG+VC
Sbjct: 61 MCSFDMTLSRTSLLPIVVTRSADQTPLSTRYEDREQSAVKRGYGHLLLDICSAVPDGVVC 120
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FFVSY Y++ ++TW D GI+ +I KLVF+ETQD ET+ ALD+++KAC GRGAV
Sbjct: 121 FFVSYEYLESAVSTWIDQGIMTQIQAKKLVFVETQDGAETSQALDSFQKACANGRGAVLL 180
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVP 622
SVARGKV+EG+DFD H GR V+M G+P
Sbjct: 181 SVARGKVSEGLDFDHHLGRAVVMMGIP 207
>gi|308163435|gb|EFO65772.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia P15]
Length = 841
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 225/845 (26%), Positives = 391/845 (46%), Gaps = 140/845 (16%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYM----------LELKRALDAKGHCLLEMPTGTGKTI 50
M+ + +++ +PY I +Q M +E +RAL LLE TG+GKT+
Sbjct: 1 MLVDIGGLSIVYPYPTISKQQLQIMEHVCDVLRTGIEGRRALS-----LLEAKTGSGKTL 55
Query: 51 ALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR-------------- 96
A+LS S+ + P ++++ RT+ ++ L E+ L+ ++
Sbjct: 56 AVLSAAASFWDAYPTAISRIVFLCRTIPVVDHVLGEIFHLNKARSDASKSAPGATASSGI 115
Query: 97 -----------------HLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTA 139
+ P K+ A+ ++SR+ LCV+ V +D C K T
Sbjct: 116 TVNAEPSLKKETPNPNVKVPPLRKLRALPITSRRRLCVSESV---SRTAYIDTECIKIT- 171
Query: 140 SWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW---CPYFLAR 196
R + E+ + C F+ K + YT+ + K CPYF R
Sbjct: 172 ---RGVDLEDTTM--CPAFKKILKEEGELSIDRESYTIPEFINQCKTYNGGVVCPYFANR 226
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVR---- 252
++ A+++V SY Y+LDPK AG + + K ++++ DEAHN++ +A+S+ +
Sbjct: 227 RLLHTADIIVGSYNYVLDPKCAGPLGAILDKNTLLIIDEAHNLEYAACDAMSMHLSYKLV 286
Query: 253 ---RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALP 309
Q++ + +++ + + D LR E R ++ + L L + + P
Sbjct: 287 VDCEQSIHAMSASIAHSTRPPPPPFSPDRSLLRKE--RAIKTVQQDSRL----LFSGSAP 340
Query: 310 SDIL--KEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG---PVSFVASITAHAG 364
+D+L +R + FL L R+V+ L+ +L ++ + K+ P V ++
Sbjct: 341 ADVLLLSSESYAAVRTPQQFLSGLLRIVRLLKEQL-SDRLTKDVVSLPHMDVLNLVRLQF 399
Query: 365 IDQKTLRFCYERLHSLMLTLEITDTD-----EFLH-------IQTICDFATLVGT--YTR 410
+ + L+ E LH I D + +FL ++T+ F T + Y +
Sbjct: 400 VTESFLQLSPEYLHYYQSYYCIFDRNLPQLVQFLSLLGYFGSVETLKHFRTYSSSLSYEK 459
Query: 411 GFSIIIEPF------DERMPHIPD--------PVLQLSCHDASLAVKPVFDRFQSVVITS 456
F++I +P D + H + +L C D +A++PV+ F +++ S
Sbjct: 460 FFTVIQKPQTSMGDDDTLLAHTQQIFEHSKHQTLYRLVCQDPFIALRPVYQYFPLIMMMS 519
Query: 457 GTL-------------------SPIDLYPRLLNF-----------HPVVSRSFKMSLTRD 486
TL + L R+L PVV + S T+
Sbjct: 520 ATLFASYECTDTSINASGIAEATKPSLIERILGITMYAEQCERSVEPVVKKCIVESGTQS 579
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
IC ++ +G+DQ ++T+F R+ P +NYG++L ++ S DG++ FF SY +M+++
Sbjct: 580 NICIKIIGKGADQAKLTTQFFFRTTPSAVQNYGRILAQISSSTADGLIVFFPSYRFMEDL 639
Query: 547 IATWN--DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
I WN S + + I +KLVF ET D +ET A+ YRK CD GRGAV F++ARGK++E
Sbjct: 640 ITLWNITSSNMFRVITNNKLVFFETPDPIETMHAVACYRKCCDSGRGAVLFAIARGKLSE 699
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGR 664
GIDF H+ R +I+ GVP+ Y+ S ++ +L YL F IK +++ FDA R QC+GR
Sbjct: 700 GIDFKYHHARSIILIGVPYLYSGSTLIHMKLNYLNAKFGIKPSEYIHFDAGRVLTQCIGR 759
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST-DMALHIAREFLRKMA 723
V R DY +I AD+R+ K + W+ +R + ++T D A+ R F + A
Sbjct: 760 VTRKDNDYAAVILADERFGECIKWTT--RWMQEMVRGKNNQITTQDEAIRTIRAFFIQQA 817
Query: 724 QPYDK 728
+ ++
Sbjct: 818 RDTNR 822
>gi|149239755|ref|XP_001525753.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449876|gb|EDK44132.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 325
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 201/326 (61%), Gaps = 14/326 (4%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F ++D+ V FPY IYPEQY+YM ++K+ LD G+C+LEMP+GTGKT++LLSL +Y
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ PE+ K++YC+RT+ E+EK L EL L ++ LG +GL+SRKNLC+N
Sbjct: 61 MHYPEHR-KIVYCSRTMSEIEKALIELHKLMEFRASALGYVEDFRGLGLTSRKNLCLNPL 119
Query: 121 VLAAENRDSVDAACRKRTASWV-----RALAAEN------PNIETCEFFENYEKAASAAV 169
+ + VD CR+ T + R + E+ C F EN + +
Sbjct: 120 ISRERKGNVVDEMCRRVTNGQLKEKIERGVVTEDMQERDPEKYSLCSFHENLNELDQHDL 179
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+P GVY+ L + KQ G CPYF R M+ F N+++YSY YLLDPK+A +S+E+ K+S
Sbjct: 180 IPEGVYSFDALIKYCKQIGTCPYFTVRRMIPFCNIIIYSYHYLLDPKIADRVSRELSKDS 239
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
+++FDEAHNIDNVCIEALS+ + L+ ATR +++ ++ K D+ +L+ EY +LV
Sbjct: 240 IIIFDEAHNIDNVCIEALSLDLTEDALKRATRGANKLADAVDEMKQQDSEKLQNEYEQLV 299
Query: 290 EGL--ALRGNLPNAWLSNPALPSDIL 313
EGL A ++SNP LP D+L
Sbjct: 300 EGLRQAEVAREEELFMSNPILPQDLL 325
>gi|253744346|gb|EET00567.1| TFIIH basal transcription factor complex helicase subunit [Giardia
intestinalis ATCC 50581]
Length = 834
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 218/831 (26%), Positives = 387/831 (46%), Gaps = 124/831 (14%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYM----------LELKRALDAKGHCLLEMPTGTGKTI 50
M+ + + V +PY + +Q M +E KRAL LLE TG+GKT+
Sbjct: 1 MLVDVCGLPVVYPYPTVSKQQLQIMEHVHNVLRTGIEGKRALS-----LLEAKTGSGKTL 55
Query: 51 ALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHN------------YQTRHL 98
A+LS S+ + P ++++ RT+ ++ L E+ L+ Y +
Sbjct: 56 AVLSTAISFWDAYPTAISRIVFLCRTIPVVDHVLNEIFHLNKARGXLSKSTTGAYISNTT 115
Query: 99 GPAAK---------------ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
P K + A+ ++SR+ LC+N V +D C + T
Sbjct: 116 EPPLKQEASNSSLKIPVLRKLRALPITSRRRLCINESV---SRTAYLDTECIRLTR---- 168
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQG---WCPYFLARHMVQ 200
A+ + C F+N K + + YT+ D K+ CPYF R ++
Sbjct: 169 --GADLEDTAVCPAFKNILKEENELSINRESYTIPDFIDHCKRYSNGEVCPYFANRRLLH 226
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGAT 260
A+++V SY Y+LDPK AG + + + ++++ DEAHN++ +A+S+ + + +
Sbjct: 227 TADIIVGSYNYILDPKCAGPLGAILDRNTLLIIDEAHNLEYAACDAMSMHLSYKLVVDCE 286
Query: 261 RNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA-WLSNPALPSDIL--KEAV 317
+++ ++ I + + + + A++ ++ L + + P+D+L
Sbjct: 287 KSIRMMSDLIAHSTLPPPPPFSPDRSLIRKERAIKTVQQDSRLLFSGSAPADVLLLSSTS 346
Query: 318 PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG---PVSFVASITAHAGIDQKTLRFCY 374
I+ + FL L R+V+ L+ +L ++ + K+ P V ++ + + L+
Sbjct: 347 YAAIKTPQQFLSGLLRIVRLLKEQL-SDRLTKDVVSLPHMDVLNLMRLQFVGESFLQLSP 405
Query: 375 ERLHSLMLTLEITDTD-----EFLH-------IQTICDFATLVGT--YTRGFSIIIEPF- 419
E LH I D + +FL ++T+ F T + Y + F++I +P
Sbjct: 406 EYLHYYQSYYRIFDKNLPQLVQFLSLLGYFGSVETLKHFRTYSSSLSYEKFFTVIQKPQT 465
Query: 420 -----DERMPHIPD--------PVLQLSCHDASLAVKPVFDRFQSVVITSGTL------- 459
D + H + +L C D +A++PV+ F +++ S TL
Sbjct: 466 STGDDDTLLAHTQQIFEHNKHQTLYRLVCQDPFIALRPVYQYFPLIIMMSATLFASYECA 525
Query: 460 ----SPI--------DLYPRLL-----------NFHPVVSRSFKMSLTRDCICPMVLTRG 496
SP + R+L + PV+ + S + C ++ +G
Sbjct: 526 DTLVSPSGAVEVAKPSMIERILGITMYAEQCERSVEPVIKKCIVESGAQPNTCIKIIGKG 585
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN--DSG 554
+DQ ++T+F R+ P +NYG++L ++ S DG++ FF SY +M+++I WN S
Sbjct: 586 ADQAKLTTQFFFRTTPSAVQNYGRILAQISSSTSDGLIVFFPSYRFMEDLITLWNITSSN 645
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
+ + I +KLVF ET D +ET A+ YRK CD GRGA+ F++ARGK++EGIDF H+ R
Sbjct: 646 MFRTITSNKLVFFETPDPIETMHAVACYRKCCDSGRGAILFAIARGKLSEGIDFKYHHAR 705
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
+I+ GVP+ Y+ S ++ +L YL F IK +++ FDA R QC+GRV R DY
Sbjct: 706 GIILIGVPYLYSGSTLIHMKLNYLNAKFGIKPSEYIHFDAGRVLTQCIGRVTRKDNDYAA 765
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST-DMALHIAREFLRKMAQ 724
+I AD+R+ K + W+ +R + ++T D A+ R F + A+
Sbjct: 766 VILADERFKECIKWTT--KWMQEMVRGKNSQITTQDEAIRTIRAFFIQQAR 814
>gi|407036107|gb|EKE38006.1| DNA repair helicase, putative [Entamoeba nuttalli P19]
Length = 467
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 243/439 (55%), Gaps = 42/439 (9%)
Query: 331 LRRLVQYLRGRLETENVEKEGPVS---------FVASITAHAGIDQKTLRFCYERLHSLM 381
++R+V + R +L +K+ + V + + + + ++F RLH L+
Sbjct: 1 MKRIVNFFREKLHEAPTKKQQRIKEQHSIQVKDIVTGLCDSSVLTPEIIKFIPNRLHLLI 60
Query: 382 LTL-------EITDTDEFLH--IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQ 432
TL + D F + + + DFA L+ + GFS + + VL
Sbjct: 61 QTLGDEYGGRQDVKGDSFYYDALYLVADFAALLCSSQEGFSYVPDVVKIDKDDYYHSVLN 120
Query: 433 LSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC---IC 489
L C DA+ A++P+ +RF S+V TSGTLSP+ Y +L VV S T D IC
Sbjct: 121 LVCVDAANAIQPILNRFHSIVFTSGTLSPLKTYINILGLKNVVEEKQIRSPTSDIVRRIC 180
Query: 490 PMVLTRG-------------------SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
P+ +T+G SD L +S++F R+D + +YGKL+VE+ VP
Sbjct: 181 PLFVTKGFDRIAITSQLADSKYAGARSDPLILSSQFFYRADRLILHSYGKLIVELSKTVP 240
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
DG++CFF SY+YM+ I+ WN+ I + I Q+KL+FIE+++ ET+LA NY+ AC G+
Sbjct: 241 DGVLCFFPSYAYMNICISYWNEMKIFESIAQNKLIFIESKNAYETSLAFQNYKLACHTGK 300
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL 650
GAV V RG+++EGIDF H R V++ G P+ + + R+EYL + I + D+
Sbjct: 301 GAVLLCVTRGRLSEGIDFTNHLARAVLIIGAPYLQSSPIPIKERVEYLNNKKIISKDDYF 360
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK--RSKLPGWILSHLRDAHLNLST 708
TFDA+R QC+G+ +R K DY ++I+ADKRY +D+ ++ +P WIL ++ + +LS
Sbjct: 361 TFDAMRTCNQCLGKCLRGKNDYTVVIYADKRYKLNDRNVKASMPQWILDAIQKRYTDLSA 420
Query: 709 DMALHIAREFLRKMAQPYD 727
D ++ +A+EFL KM+ +D
Sbjct: 421 DQSIVLAKEFLMKMSYSFD 439
>gi|159107698|ref|XP_001704126.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
gi|157432178|gb|EDO76452.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
Length = 840
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 224/846 (26%), Positives = 389/846 (45%), Gaps = 142/846 (16%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLEL----------KRALDAKGHCLLEMPTGTGKTI 50
M+ + +++ +PY + +Q M + KRAL LLE TG+GKT+
Sbjct: 1 MLIDVGGLSIVYPYPTVSKQQLQIMEHVCDVLRTGIGGKRALS-----LLEAKTGSGKTL 55
Query: 51 ALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG----------- 99
A+LS S+ + P ++++ RT+ ++ L E+ L+ ++
Sbjct: 56 AVLSAAASFWDAYPTAISRIVFLCRTIPVVDHVLGEIFHLNKARSDAFKSVAGATASSAV 115
Query: 100 --------------------PAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTA 139
P K+ A+ ++SR+ LCVN V A +D C K T
Sbjct: 116 TVGAEPSLKKEPPNSSVRAPPFRKLRALPITSRRRLCVNESVSRAAY---LDTECIKIT- 171
Query: 140 SWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL----RAFGKQQGWCPYFLA 195
R + E+ + C F+ + + YT+ + R + CPYF
Sbjct: 172 ---RGVDLEDTVM--CPAFKKTLEEEGELSIGRESYTIPEFINQCRTYNGGV-VCPYFAN 225
Query: 196 RHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVR--- 252
R ++ A+++V SY Y+LDPK AG + + + ++++ DEAHN++ +A+S+ +
Sbjct: 226 RRLLHTADIIVGSYNYVLDPKCAGPLGAILDQNTLLIIDEAHNLEYAACDAMSMHLSYKL 285
Query: 253 ----RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPAL 308
Q++ + +++ + + D LR E R ++ + L L + +
Sbjct: 286 VVDCEQSIHAMSASIAHSARPPPPPFSPDRSFLRKE--RAIKTVQQDSRL----LFSGSA 339
Query: 309 PSDIL--KEAVPGNIRRAEHFLHVLRRLVQYLRGRLE---TENVEKEGPVSFVASITAHA 363
P+D+L ++ + FL L R+V+ L+ +L T++V V V ++
Sbjct: 340 PADVLLLSSESYAAVKTPQQFLSGLLRIVRLLKEQLSDRLTKDVVSLPHVD-VLNLVRLQ 398
Query: 364 GIDQKTLRFCYERLHSLMLTLEITDTD-----EFLH-------IQTICDFATLVGT--YT 409
I + L+ E LH I D + +FL ++T+ F T + Y
Sbjct: 399 FITESFLQLSPEYLHYYQSYYCIFDKNLPQLVQFLSLLGYFGSVETLKHFRTYSSSLSYE 458
Query: 410 RGFSIIIEPF------DERMPHIPD--------PVLQLSCHDASLAVKPVFDRFQSVVIT 455
+ F++I +P D + H + +L C D +A++PV+ F +++
Sbjct: 459 KFFTVIQKPQTSMGDDDTLLAHTQQIFEHSKHQTLYRLVCQDPFIALRPVYQYFPLIMMM 518
Query: 456 SGTL-------------------SPIDLYPRLLNF-----------HPVVSRSFKMSLTR 485
S TL + L R+L PVV + S +
Sbjct: 519 SATLFASYECTDTSINSSGVAEATKPSLIERILGITMYAEQCERSVEPVVKKCIIESGAQ 578
Query: 486 DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
IC ++ +G+DQ ++T+F R+ P +NYG++L ++ S DG++ FF SY +M++
Sbjct: 579 SNICIKIIGKGADQAKLTTQFFFRTTPSAVQNYGRILAQISSSTADGLIVFFPSYRFMED 638
Query: 546 IIATWN--DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVA 603
+I WN S + + I +KLVF ET D +ET A+ YRK CD GRGAV F++ARGK++
Sbjct: 639 LITLWNITSSNMFRVITNNKLVFFETPDPIETMHAVACYRKCCDSGRGAVLFAIARGKLS 698
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVG 663
EGIDF H+ R +I+ GVP+ Y+ S ++ +L YL F IK +++ FDA R QC+G
Sbjct: 699 EGIDFKYHHARSIILIGVPYLYSGSTLIHMKLNYLNAKFGIKPSEYIHFDAGRVLTQCIG 758
Query: 664 RVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST-DMALHIAREFLRKM 722
RV R DY +I AD+R+ K + W+ +R + ++T D A+ R F +
Sbjct: 759 RVTRKDNDYAAVILADERFGECIKWTT--RWMQEMVRGKNSQITTQDEAIRTIRAFFIQQ 816
Query: 723 AQPYDK 728
A+ ++
Sbjct: 817 ARDTNR 822
>gi|70921532|ref|XP_734078.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56506478|emb|CAH82946.1| hypothetical protein PC300239.00.0 [Plasmodium chabaudi chabaudi]
Length = 209
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 167/203 (82%)
Query: 426 IPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR 485
I DPV+Q +C D+S+A+K V +R++SVV+TSGT++P++LYP+LLNF V++ SF MS R
Sbjct: 7 IYDPVIQFACLDSSIAMKSVLNRYKSVVLTSGTITPLELYPKLLNFSTVLTASFPMSFDR 66
Query: 486 DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
+C+CP+++T+ SD +P+S+++ +R+D V +NYG LLVEM +PDGI+ +F SY YM+
Sbjct: 67 NCVCPLIVTKSSDLIPLSSQYSLRNDLNVIKNYGFLLVEMCKNIPDGIISYFPSYIYMEH 126
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEG 605
+++TW + GI+ I+++KL+FIET+D+V TT+AL N++KACD +GAVF S+ RGK+AEG
Sbjct: 127 VMSTWYELGIISNILEYKLIFIETKDIVSTTIALHNFKKACDLXKGAVFLSICRGKIAEG 186
Query: 606 IDFDRHYGRLVIMFGVPFQYTLS 628
IDFD+HYG+ VI+FG+P+QYTLS
Sbjct: 187 IDFDKHYGKCVIVFGIPYQYTLS 209
>gi|440492760|gb|ELQ75301.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, partial [Trachipleistophora
hominis]
Length = 493
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 243/453 (53%), Gaps = 74/453 (16%)
Query: 318 PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL 377
PGN+R+ H L +LRR++++LR +L++ ++ P +FV S+ I ++TL F +R
Sbjct: 47 PGNLRKDVHVLSILRRILEFLRIKLKSTHLTINTPHNFVCSLENLTFISRRTLSFLKKRF 106
Query: 378 HSLMLTLEITDTDEFLHIQTICDFATLVGTY--TRGFSIIIEPFDERMPHIPDPVLQLSC 435
++ L + + D+ + + D + Y + FS+I EP + P + LSC
Sbjct: 107 QAVKLPFD-ENVDK---LNVLVDMMDTLARYAGSNAFSVIFEPLLSN--NSLSPKITLSC 160
Query: 436 HDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP-------------VVSR----- 477
+D+ +A+ + +F+S+++TSGTL+P D+Y RLL +VS+
Sbjct: 161 NDSRIAMSAL--KFRSIMVTSGTLTPFDVYMRLLGITGRSVSIRGSTKEVLIVSKGNDQI 218
Query: 478 --SFKMSLTRDCICPMVLTRGSDQLPV---------------------STKFDMRSDPGV 514
S +SL D P SD +P+ S+ + +R+
Sbjct: 219 NISSDVSLESDKTAPA--RPSSDAVPITETYGSVRNAGLANDFESALLSSSYKLRTSSST 276
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
RNY L+ ++ IVPDG++ FF SY +M EII+ ++K++ HKL+FIET + E
Sbjct: 277 VRNYATLIKDLCDIVPDGMIIFFPSYVFMHEIISKC--EFMIKKL--HKLIFIETINYEE 332
Query: 575 TTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
+ AL NY++A GRGA+ F VARGKV+EGIDF GR V++ GVPF +T S I+ R
Sbjct: 333 SINALMNYKRAIKHGRGAIMFCVARGKVSEGIDFKNEEGRCVLLIGVPFAFTESVIIKER 392
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH---DKRSKL 691
L++L+ + FL FDALR A QC+GRV+R K DYG+M+ AD RY+ + D+ +
Sbjct: 393 LKFLKQNINLNA--FLQFDALRHALQCLGRVVRGKNDYGLMVMADYRYNSYKYGDEYDVI 450
Query: 692 PGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
G LS DM ++I + + RKMA
Sbjct: 451 DG------------LSVDMCVNIGKAYFRKMAN 471
>gi|336377405|gb|EGO18567.1| hypothetical protein SERLADRAFT_443905 [Serpula lacrymans var.
lacrymans S7.9]
Length = 239
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 166/237 (70%), Gaps = 3/237 (1%)
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGAT 260
F +VV+YS+ YLLDPKVA +SKE+ K+++VVFDEAHNIDNVCIE+LS+ + R L+ A
Sbjct: 3 FVDVVIYSFHYLLDPKVAEQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAA 62
Query: 261 RNLSRINQEIERFKATDAGRLRAEYNRLVEGL---ALRGNLPNAWLSNPALPSDILKEAV 317
R+++++ ++IE K TDA +L+ EY +LVEGL A + ++SNP LP D+L EA+
Sbjct: 63 RSVTKLGEKIEEIKTTDAAKLQDEYAKLVEGLEEPASEAADEDNFMSNPVLPDDLLNEAI 122
Query: 318 PGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL 377
PGNIR+AEHF+ L+R V+YL+ R+ +V E P+SF+ + I+++ LRFC ERL
Sbjct: 123 PGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERL 182
Query: 378 HSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLS 434
S++ TLE+ DE+ +Q + FATLV TY +GF +I+EPF+ +P+P+ +
Sbjct: 183 QSMIRTLELNRLDEYSSLQKVASFATLVATYEKGFLLILEPFETDNATVPNPIFHFT 239
>gi|302129716|ref|NP_001013328.2| regulator of telomere elongation helicase 1 [Danio rerio]
Length = 1177
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 219/832 (26%), Positives = 357/832 (42%), Gaps = 136/832 (16%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-- 59
+ KL+ + V FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 3 VIKLKGINVDFPF-TPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWRD 61
Query: 60 -------------------------------VLSKPENPV------KLIYCTRTVHEMEK 82
+ + P K+IY +RT ++ +
Sbjct: 62 HFKDTISARKITERMGGAELFADRPMSSWGTAATDGDTPTYYTDIPKIIYASRTHSQLTQ 121
Query: 83 TLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWV 142
+ ELK N R KI +G SR+ LC+N V+ E+ CR + +S
Sbjct: 122 VVNELK---NTSYR-----PKICVLG--SREQLCINQEVMRHESNHIKVHMCRAKVSS-- 169
Query: 143 RALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFA 202
+C F+ N ++ ++ + + ++DL GK+Q CPY+L+R + Q A
Sbjct: 170 ----------RSCIFYNNVDEKSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQHA 219
Query: 203 NVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRN 262
+V+ Y YLLDPK + E+ K +VV+FDEAHN++ +C E+ S + L A
Sbjct: 220 DVIFMPYNYLLDPKSRRAHNIEL-KGAVVIFDEAHNVEKMCEESTSFDLTPHDLISAIEA 278
Query: 263 LSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ R+ +E +A+D + + + VE L N L DI I
Sbjct: 279 VDRLLRE----QASDISKADSAEDFNVESL------------NSGLKMDIT------TIA 316
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
+ + L L + + + K P SF+ + A ++ KT E + +
Sbjct: 317 KVKQILMDLETAINDFEMPANNQGITK--PGSFIFELFEMANVNSKTKTETVEAMEQITG 374
Query: 383 TLEITDTDEFLH---IQTICDFATLV--------------GTYTRGFSIIIEPFDE--RM 423
L FL+ +Q + D LV G + F + I P + +
Sbjct: 375 YL-AGRPGVFLNTSGLQKVADIIQLVFVAEPAEGSKKSQTGNSLKEFKVHIHPDNSNFKK 433
Query: 424 PHIPD-----------PVLQLSCHDASLAVKPVF-DRFQSVVITSGTLSPIDLYPRLLNF 471
I D VL C +++ + + +++TSGTLSP+ + +
Sbjct: 434 KQITDVWASSSTKKQGNVLSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQI 493
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
VS + RD I ++ +G D + +ST FD R P + G LV + +VP
Sbjct: 494 PFPVSLENPHVIQRDQIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPH 553
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CG 589
G++ FF SY MD+ + W G I K +F+E + T +D Y D
Sbjct: 554 GLLVFFPSYPVMDKTLEFWRAKGHADRIENVKPMFVEPRGKGTFTEVIDGYYGKVDDPNS 613
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF--QIKEG 647
G FF+V RGK +EG+DF YGR V++ G+PF + ++ +++YL + +I
Sbjct: 614 SGGSFFAVCRGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLKMQYLDEMCRNKISGV 673
Query: 648 DFLTF------DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR- 700
+LT A R Q +GRVIR + DYG + D R+ D R++LP W+ +++
Sbjct: 674 KYLTGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKSADARNQLPSWVRPYVKI 733
Query: 701 -DAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGS 751
D + D+A R + P K + G + +QAD ++ N GS
Sbjct: 734 YDGFGTMVRDVA-QFFRTAQKTRPVPVKKGKAEGHE---NQADT-RLLNTGS 780
>gi|229891620|sp|P0C928.1|RTEL1_DANRE RecName: Full=Regulator of telomere elongation helicase 1
Length = 1177
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 219/832 (26%), Positives = 357/832 (42%), Gaps = 136/832 (16%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-- 59
+ KL+ + V FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 3 VIKLKGINVDFPF-TPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWRD 61
Query: 60 -------------------------------VLSKPENPV------KLIYCTRTVHEMEK 82
+ + P K+IY +RT ++ +
Sbjct: 62 HFKDTISARKITERMGGAELFADRPMSSWGTAATDGDTPTYYTDIPKIIYASRTHSQLTQ 121
Query: 83 TLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWV 142
+ ELK N R KI +G SR+ LC+N V+ E+ CR + +S
Sbjct: 122 VVNELK---NTSYR-----PKICVLG--SREQLCINQEVMRHESNHIKVHMCRAKVSS-- 169
Query: 143 RALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFA 202
+C F+ N ++ ++ + + ++DL GK+Q CPY+L+R + Q A
Sbjct: 170 ----------RSCIFYNNVDEKSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQHA 219
Query: 203 NVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRN 262
+V+ Y YLLDPK + E+ K +VV+FDEAHN++ +C E+ S + L A
Sbjct: 220 DVIFMPYNYLLDPKSRRAHNIEL-KGAVVIFDEAHNVEKMCEESTSFDLTPHDLISAIEA 278
Query: 263 LSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIR 322
+ R+ +E +A+D + + + VE L N L DI I
Sbjct: 279 VDRLLRE----QASDISKADSAEDFNVESL------------NSGLKMDIT------TIA 316
Query: 323 RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
+ + L L + + + K P SF+ + A ++ KT E + +
Sbjct: 317 KVKQILMDLETAINDFEMPANNQGITK--PGSFIFELFEMANVNSKTKTETVEAMEQITG 374
Query: 383 TLEITDTDEFLH---IQTICDFATLV--------------GTYTRGFSIIIEPFDE--RM 423
L FL+ +Q + D LV G + F + I P + +
Sbjct: 375 YL-AGRPGVFLNTSGLQKVADIIQLVFVAEPAEGSKKSQTGNSLKEFKVHIHPDNSNFKK 433
Query: 424 PHIPD-----------PVLQLSCHDASLAVKPVF-DRFQSVVITSGTLSPIDLYPRLLNF 471
I D VL C +++ + + +++TSGTLSP+ + +
Sbjct: 434 KQITDVWASSSTKKQGNVLSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQI 493
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
VS + RD I ++ +G D + +ST FD R P + G LV + +VP
Sbjct: 494 PFPVSLENPHVIQRDQIFVSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPH 553
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CG 589
G++ FF SY MD+ + W G I K +F+E + T +D Y D
Sbjct: 554 GLLVFFPSYPVMDKTLEFWRAKGHADRIENVKPMFVEPRGKGTFTEVIDGYYGKVDDPNS 613
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF--QIKEG 647
G FF+V RGK +EG+DF YGR V++ G+PF + ++ +++YL + +I
Sbjct: 614 SGGSFFAVCRGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLKMQYLDEMCRNKISGV 673
Query: 648 DFLTF------DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR- 700
+LT A R Q +GRVIR + DYG + D R+ D R++LP W+ +++
Sbjct: 674 KYLTGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKSADARNQLPSWVRPYVKI 733
Query: 701 -DAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGS 751
D + D+A R + P K + G + +QAD ++ N GS
Sbjct: 734 YDGFGTMVRDVA-QFFRTAQKTRPVPVKKGKAEGHE---NQADT-RLLNTGS 780
>gi|312379509|gb|EFR25759.1| hypothetical protein AND_08621 [Anopheles darlingi]
Length = 972
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 193/739 (26%), Positives = 343/739 (46%), Gaps = 98/739 (13%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
++ + V V FP++ Y Q YM +L + L + LLE PTGTGKT+++L ++++
Sbjct: 3 VYDIGGVPVDFPFEP-YQVQRDYMSKLLQCLQQSTNGLLESPTGTGKTLSILCASLAWLV 61
Query: 62 -------SKPENPVKLIYCTRTVHEMEKTLAELKLL-HNYQTRHLGPAAKILAIGLSSRK 113
+ K+IY +RT ++ + + ELK +NY + AI L SR
Sbjct: 62 HSRSHHNATKAGRTKIIYASRTHSQLSQAMQELKKSSYNY----------VRAIVLGSRI 111
Query: 114 NLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP- 172
LC++ V +EN +V C+++ A+ +C ++ E+ ++ L
Sbjct: 112 QLCIHPDVPKSENNATVTYLCKEKVAT------------RSCVYYRRVEQMKDSSELANV 159
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+ ++DL G + CP++L++ MV+ A+++ Y YLLD K + E+Q SV++
Sbjct: 160 PILDIEDLVTVGSRTKACPFYLSKEMVERADIIFMPYNYLLDAKARKANNLELQN-SVII 218
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
DEAHN++ +C ++ S + + A ++S + + + A+ AG E + L
Sbjct: 219 LDEAHNVERMCEDSGSAVLSSTDIALAIEDVSHVMETMGE-SASVAGLAETENEKKEFSL 277
Query: 293 ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGP 352
L L DI A P + +R HF +V G
Sbjct: 278 HELSLLKQQLLDLEKSVDDI---AFPAS-QREVHFHNV-------------------SGV 314
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGF 412
VS +IT + + + R ++R S + + +FL I + R F
Sbjct: 315 VSLFGAITGY--LTTLSERNSFKRRGSGLQAVS-----DFLEIVYAGQGEEYIAAVRRCF 367
Query: 413 SIII---EP---------------FDERMPHIP----DPVLQLSCHDASLAVKPVFDR-F 449
+ + EP ++ H P ++ C + ++ + R
Sbjct: 368 KVYVVAEEPKQTKRNFKRADGWTATNQPAAHAPLKSSAKIVHFWCFNPGFGMRQLASRGV 427
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+V+TSGTL+P+ LN V+ + R + V+ +GSD +S+ ++ R
Sbjct: 428 RSIVLTSGTLAPLTPLINELNISIPVTLENPHIIDRSQVLVRVIAKGSDGQLLSSVYNNR 487
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE- 568
++P R+ G+ L+ + ++P+G++ FF SY+ +D+ + W G+ EI K +F+E
Sbjct: 488 NNPDYIRSLGRTLLSVCPVIPNGLLVFFPSYTVLDKCVEGWQSGGLWSEINNRKAIFVEP 547
Query: 569 -TQDVVETTLALDNYRKACDC-GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
T+D TT+ + Y++ D +GA+F +V RGKV+EG+DF GR V++ G+PF
Sbjct: 548 RTKDAFNTTMD-EFYQRIQDTQAKGAIFLAVCRGKVSEGLDFADINGRAVLITGLPFPPL 606
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFD------ALRQAAQCVGRVIRSKADYGMMIFADK 680
++ + EYL + E +T D A R Q +GRVIR + DYG ++ D
Sbjct: 607 HDPRVVLKKEYLTSN-RTPENRLITGDEWYALQASRAVNQAIGRVIRHRNDYGAILLCDA 665
Query: 681 RYSRHDKRSKLPGWILSHL 699
R+ ++ +L W+ SHL
Sbjct: 666 RFQNAHQQMQLSSWVRSHL 684
>gi|123486053|ref|XP_001324631.1| helicase [Trichomonas vaginalis G3]
gi|121907517|gb|EAY12408.1| helicase, putative [Trichomonas vaginalis G3]
Length = 880
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 207/773 (26%), Positives = 343/773 (44%), Gaps = 108/773 (13%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL----SK 63
+ V FP+ YP Q + M + AL + LLE PTGTGKT++LL+ Y K
Sbjct: 3 IDVDFPFSTPYPAQKAIMAKTMVALKQSENALLESPTGTGKTLSLLASSLGYQTWLQSQK 62
Query: 64 PENP-------------------------VKLIYCTRTVHEMEKTLAELKLLHNYQTRHL 98
PE P +K+ Y +RT +++ + ++ELK R L
Sbjct: 63 PEPPKKIDPAALYGEKYTELDPETEEEPQLKVYYTSRTHNQLSQVVSELK-------RKL 115
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFF 158
+AI L+SR+ LC+N V N+ +DAACR E+ CEF
Sbjct: 116 PTYRPKMAI-LASRQQLCINDNV---RNKPDIDAACR-----------LEHGTKHNCEFG 160
Query: 159 ENYEKAASAAVLPPGVYT---LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP 215
++ +++P G Y+ +++L +++ CPYF+ R++ + A ++ Y Y+LD
Sbjct: 161 KSM--TIPRSMMPDGEYSKYDIENLIDVCREEVKCPYFVTRNLAKRAEFILAPYNYILDG 218
Query: 216 KVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKA 275
++ G + E+ SVV+FDE HNI+ +C +A S+S+ + +S I I
Sbjct: 219 RIRGTMKIELAN-SVVIFDEGHNIEGICRDAASLSL-------DYKEVSYIQGYIATLAQ 270
Query: 276 TDAGRLRAEYNRLVEGLALRGNLPNA---WLSNPALPSDILKEAVPGNIRRAEHFLHVLR 332
+ RL+ N L + G L + W + I + N R E F
Sbjct: 271 REDMRLQIG-NTLFQHFLSIGRLFDKIFEWFTR-----TIEESPWEQNRNRQETFFQY-- 322
Query: 333 RLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL--EITDTD 390
Q + L + KE V + + ++KT + +++ + + T
Sbjct: 323 ---QDVEMILSGWTLNKERFVLYKEDMEEIISANEKTTGDQDSIIPTIVAAILGKTLTTL 379
Query: 391 EFLHIQ-TICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRF 449
F++ +ICDF ++ Y + I +P L+L C +A + + +
Sbjct: 380 NFIYTNDSICDFRLIITDYEKNKEEI------------NPKLELLCMSPGVAFRSIVAKT 427
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
SV+ITSGTLSP+ Y L S K + + M++ R ST +
Sbjct: 428 HSVIITSGTLSPLTQYESELRTKFTHQLSAKHVIDPSQVLSMIIQRMDGVELTSTAKSLN 487
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
++ + + G +++ +V VPDGI+ FF S S M + + W +L EI + K VF E
Sbjct: 488 NN--IYKKLGDIVLTIVQKVPDGILLFFPSGSTMRKCLEIWRSESLLYEIQKFKPVFNEN 545
Query: 570 QDVVETTL--ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ A YR + + G+G + SV RG+V+EG DF R VI+FG+P+
Sbjct: 546 SGNKKKGEGDAFKEYRSSINKGKGGLLISVCRGRVSEGTDFADRQARCVIIFGIPYPSLY 605
Query: 628 SKILLARLEYLRDTFQIKEGDFLTFD--------ALRQAAQCVGRVIRSKADYGMMIFAD 679
+ ++ + Y D + K +F T D A R +Q VGR IR K DYG +I D
Sbjct: 606 APEIILKRNYNDDHAKQKNVEFATSDGSEWYSAQAFRALSQAVGRCIRHKDDYGSIIMID 665
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSI 732
R+ + +RSK P W+ L+ + +++ +A F + M + + I
Sbjct: 666 SRFMQ--ERSKFPRWMQDGLKRNPITSLSELGGQLAN-FYQDMTMRFPNSAQI 715
>gi|347964194|ref|XP_311162.5| AGAP000634-PA [Anopheles gambiae str. PEST]
gi|387912925|sp|Q7QEI1.5|RTEL1_ANOGA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|333467418|gb|EAA06834.5| AGAP000634-PA [Anopheles gambiae str. PEST]
Length = 991
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 206/820 (25%), Positives = 359/820 (43%), Gaps = 167/820 (20%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL- 61
+ + + V FP++ Y Q +YM ++ L K + +LE PTGTGKT++LL +++L
Sbjct: 4 YMINGIPVNFPFEP-YELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAWLLH 62
Query: 62 --------------SKPENP--------------------------VKLIYCTRTVHEME 81
+ PE P +K+IY +RT ++
Sbjct: 63 MKSKQPKHRMETIDTLPEPPELSNAKHAALDPEQALALQQQKANAKMKIIYASRTHSQLS 122
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK T +L + +I L SR LC++ + EN CR+
Sbjct: 123 QAMQELK-----NTSYLF----VRSIILGSRDQLCIHPDISKQENNAIKTVLCRE----- 168
Query: 142 VRALAAENPNIETCEFFENYEKA---ASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHM 198
++ A N C F+ E A A +P V ++DL G++ CPY+L++ +
Sbjct: 169 --SVKARN-----CSFYNRVETAKDRPDVATVP--VMDIEDLVTVGRKLKACPYYLSKEL 219
Query: 199 VQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
V+ A+V+ Y YLLDPK +Q +V++ DEAHN++ +C E S +R +
Sbjct: 220 VEQADVIFMPYNYLLDPKARKSNGLSLQN-TVIILDEAHNVEKMCEEVGSALLRSSDIAL 278
Query: 259 ATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVP 318
A + S + + + D G AW +
Sbjct: 279 AIEDTSSVIKSM-----MDGG--------------------GAWTGD------------- 300
Query: 319 GNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAG------IDQKTLRF 372
++ E L L L + L G E + P+ F T H G +++ ++F
Sbjct: 301 -GEKQLELTLDDLVLLKEILLG---VEKAVDDIPILFSQGGTTHPGTYIFDLLEKANIKF 356
Query: 373 -----CYERLHSLMLTLEITDTDEFLH----IQTICDFATLVGTYT---------RGFSI 414
+ ++SL+ + T F+ +Q++ DF +V + + F +
Sbjct: 357 GNINVVLQVMNSLITHITTEKTGGFVRRGAGLQSMVDFLEVVFASSGPEYRQAVEKCFRV 416
Query: 415 IIEPFDERM----------------PHIPDPVLQLS------CHDASLAVKPVFDR-FQS 451
IEP + + + PV S C + ++ + D +S
Sbjct: 417 HIEPEEPKQLAKGGVKRADGWTATKQPLKAPVKSTSKVINFWCFNPGFGMRQLVDSGTRS 476
Query: 452 VVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
+++TSGTL+P+ + L+ VS + R + V+T G D++ +++ F RS+
Sbjct: 477 IILTSGTLAPLKPFISELSLPVAVSLENPHIIARSQVYVKVITHGPDRVELNSSFKNRSN 536
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET-- 569
P + G+ + + I+P G++ FF SY +++ W SGI +I + K +F+E
Sbjct: 537 PEYIASLGRTALSLCPIIPGGLLIFFPSYPLLNKCSEEWQASGIWGQISRLKQIFVEPRG 596
Query: 570 QDVVETTLALDNYRKACD-CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+D TT+A + Y + D RGA+F +V RGKV+EG+DF GR V++ G+PF +
Sbjct: 597 KDQFTTTMA-EYYAQVRDPASRGAIFMAVCRGKVSEGLDFADANGRAVMITGLPFPPMMD 655
Query: 629 KILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
++ + +YL R+ I D+ + +A R Q +GRVIR K DYG ++ D R+
Sbjct: 656 ARVVLKKQYLDTNRTRENELITGNDWYSLEASRAVNQAIGRVIRHKDDYGAILLCDSRFQ 715
Query: 684 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMA 723
++++L WI SHLR++ + + F R M+
Sbjct: 716 NARQQAQLSAWIHSHLRESSAVPNFGTVVGEMSRFFRHMS 755
>gi|68069513|ref|XP_676668.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496467|emb|CAH97769.1| hypothetical protein PB000523.02.0 [Plasmodium berghei]
Length = 363
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 190/363 (52%), Gaps = 105/363 (28%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+++ ++FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFYLDNLEIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ-------------------------- 94
K +N K I+CTRTV EMEK+L ELK + NY+
Sbjct: 62 YYKNDNS-KFIFCTRTVAEMEKSLIELKKVINYRINIIKKCNELSKKISKSNIKEDNDVI 120
Query: 95 --------------------TRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAAC 134
+ G ++ILAIG+S+R+ +CVN +VL R+ +D C
Sbjct: 121 KNENNDEKETNIINEEVDNISNGFGNNSEILAIGISARRCMCVNEKVLLKHEREKIDEEC 180
Query: 135 RKRTASWVRALAA-------ENPNIET--------------------------------- 154
RK TA+++R N NI+
Sbjct: 181 RKLTATFIREKKISKKLNNYSNSNIDKISDFIIKNKHHIDMEDYFSIYNSKNSISEYNDL 240
Query: 155 --CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANV 204
C +FENY+K ++ PGVYT+++L+ K CPYF A+ +++ A V
Sbjct: 241 GLCGYFENYKKDFVYELIEPGVYTIEELKELCKNYKNRENINTPICPYFCAKKIIEIAKV 300
Query: 205 VVYSYQYLLDPKVAGII--SKEM------QKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
+V +YQY++DPKV+ I K++ +K ++VFDEAHNID+VC+EALSV++ R L
Sbjct: 301 IVLNYQYIIDPKVSKSIFLGKDINNRVNYKKNDIIVFDEAHNIDSVCLEALSVNIDRSIL 360
Query: 257 EGA 259
A
Sbjct: 361 NKA 363
>gi|196008361|ref|XP_002114046.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
gi|190583065|gb|EDV23136.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
Length = 702
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 193/732 (26%), Positives = 321/732 (43%), Gaps = 106/732 (14%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLI----TSYVL-- 61
+ V FP+ N YP Q YM + + L + +LE PTGTGKT+ LL +YV
Sbjct: 9 IEVDFPF-NPYPCQLDYMTNVIQCLQEGKNGILESPTGTGKTLCLLCACLAWRQTYVAQV 67
Query: 62 ---------------SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILA 106
+ N K+IY +RT ++ + + ELK H KI
Sbjct: 68 QLNQRIQMQQLQQNPNTDRNMPKIIYSSRTHSQLSQVVNELK--------HTIYRPKICI 119
Query: 107 IGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAAS 166
+G SR+ +C++ V ++ + ACR + N TC F N E
Sbjct: 120 LG--SREQMCIHPEVAKLQSNTAKIHACRAKV------------NARTCHFCNNVETKKD 165
Query: 167 AAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226
+ +++L G +Q CPY++AR + A++V Y YL+D K S +M
Sbjct: 166 DPSFSENILDIEELVELGGKQKVCPYYMARELRSNADIVFMPYNYLIDFKSRQSNSIDM- 224
Query: 227 KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKAT------DAGR 280
K ++++ DEAHN++ +C ++ S + + + ++R K+T DA
Sbjct: 225 KNAIIICDEAHNLEKICEDSASFDLSSADIANCIDEVDNFINILQRIKSTTDSEEYDATG 284
Query: 281 LRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRG 340
+R N L L +R + ++++ +I K+ + F+ VL + +
Sbjct: 285 MRCNVNNLY-CLTMRYVIESSYIY------EIFKQ-LNVTFETKHLFVQVLGKCI----- 331
Query: 341 RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
+ VS D KTLR + L ++ L + FL +
Sbjct: 332 ---------DATVS-----------DSKTLRAKHFGLEKVLDILTVI----FLDLS---- 363
Query: 401 FATLVGTYTRGFSIII--EPFDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSG 457
+ R + +II E + +L C S ++K + D+ ++V++TSG
Sbjct: 364 -SGSSSNSQRYYKVIIYIETLIDYYSSNCCRILSYWCFSPSYSMKELIDQEVRAVILTSG 422
Query: 458 TLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARN 517
TLSPI+ V + + I +++G +++ + RS +
Sbjct: 423 TLSPIESLVAEFQVSFPVQLQNPHVIDKKQIWIGTVSKGPCGTALNSSYRNRSSAEYLSS 482
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTL 577
G +V I+PDG++ FF SY M+ I W SGI I QHK + IE Q E
Sbjct: 483 LGNTIVNFARIIPDGLLVFFPSYPVMNSCIEHWQSSGIWDRICQHKSLHIEPQHKSEFNR 542
Query: 578 ALDNYRKAC---DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
+D Y + +C GA+F V RGKV+EG+DF GR VI+ G+PF + ++ +
Sbjct: 543 VMDEYYSSVRDENCS-GAIFLGVCRGKVSEGVDFADINGRAVIITGLPFPPSKEAKVMLK 601
Query: 635 LEYLRDTFQIKEG------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
++YL + KE D+ A R Q +GRVIR + DYG +I D+R+++ D
Sbjct: 602 MQYLDENIGFKEHKSICGRDWYRQQASRAVNQAIGRVIRHRNDYGAIILCDERFNQKDSI 661
Query: 689 SKLPGWILSHLR 700
S+LP W+ +++
Sbjct: 662 SQLPKWLKDYVQ 673
>gi|353442067|gb|AER00319.1| xeroderma pigmentosum group D, partial [Hydra vulgaris]
Length = 173
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 133/173 (76%)
Query: 420 DERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSF 479
D++ P IP+P++ C DAS+A+KPVF+RFQSVVITSGTLSP+D+YP+LL+F PV +F
Sbjct: 1 DDQTPTIPNPIIHFCCLDASVAIKPVFERFQSVVITSGTLSPVDMYPKLLDFQPVNMSTF 60
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
M+L R C+ P++ ++G+DQ+ +S+ F R D V RNYG LLVEM + VPDGI CFFVS
Sbjct: 61 TMTLARQCVLPIICSKGNDQVAISSSFQTRDDMAVIRNYGNLLVEMSASVPDGIACFFVS 120
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA 592
Y YM+ +++ W+D GI+ I ++KL+FIETQD ET LAL NY+KAC+ GRG
Sbjct: 121 YLYMETVVSIWHDQGIISNIQKNKLLFIETQDGPETALALYNYQKACENGRGG 173
>gi|242003120|ref|XP_002422617.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
gi|212505418|gb|EEB09879.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
Length = 1016
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 192/735 (26%), Positives = 319/735 (43%), Gaps = 117/735 (15%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
+ L V FPY Y Q SYM ++ LD K H +LE PTGTGKT+ L + +T++
Sbjct: 3 VISLRGYDVSFPYPIPYDIQKSYMNKVLTCLDEKTHAVLESPTGTGKTLCLFAPVTAWAK 62
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-----AAKILAIG-------- 108
K +N V VH + + EL H T H GP +K+
Sbjct: 63 RKKKNAV--------VHVTQDSNKELNSPHFESTEHQGPWGVKSKSKVWYTARTHSQIAQ 114
Query: 109 -----------------LSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPN 151
+ +R LC+N VL ++ C++ S
Sbjct: 115 TVSEVRKCDIEGLHVRVMGARDQLCINELVLEEKDSYIKTVKCKELVKS----------- 163
Query: 152 IETCEFFE--NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
+ C+++ +YEK V ++DL + GK G CPYFLA+ + A++++ Y
Sbjct: 164 -KKCKYYTKLSYEKDFKRFYQSGEVLDIEDLVSIGKSCGICPYFLAKRASETADILLLPY 222
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEA-------LSVSVRRQTLEGATRN 262
Y++D + ++Q + V++FDE HN+ + C E+ L V++ + ++ +
Sbjct: 223 NYIIDRESRESNGLQLQND-VIIFDEGHNVPSTCEESYEFSFTSLDVAIGIKNIQDVMLS 281
Query: 263 LSRINQEIERFKATDAGRLRAEYNRLVEGL-ALRGNLPNAWLSNPALPSDILKEAVPGNI 321
LS++ +++ + D + + +VE L L L SN LP
Sbjct: 282 LSKLTEDLIEDEEIDVSKHVSNSMMMVEMLQKLESALSEMNASNELLP------------ 329
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM 381
+ L +L + + + S S+T G +T E++ S+M
Sbjct: 330 ---------VSELYNFLSSAVLIDGISSFKSDSEKLSLT---GSTLETFNLL-EKMMSVM 376
Query: 382 LTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
+ D ++I D R F +I ER H L C + S
Sbjct: 377 YGSTVRSFD-----KSIVD---------RSFKCVITTDPER--HFAKK-FSLYCFNPSFG 419
Query: 442 VKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMV-LTRGSDQ 499
+K + QS++ITSGTLSP+ + L V+ K + + C P V L G +
Sbjct: 420 IKSLLALGSQSIIITSGTLSPLRTFIYELGLPKPVTLENK-HIAKKCQVPFVILGTGVNN 478
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-NDSGILKE 558
+ + + R+DP + G L +++ +PDGI+ F SY+ M + +W D GI
Sbjct: 479 VKMDGAYKNRNDPKYVSSLGMSLTNLIASIPDGILLLFSSYTMMQSLKESWEKDLGIWTR 538
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
+ K VF+E ++ E ++NYR+A D G GA+ V RGK++EG+DF Y R V +
Sbjct: 539 LNSLKRVFVEPRNKNEFINCMENYRRAIDSGNGAILMGVLRGKISEGMDFKDQYCRGVFI 598
Query: 619 FGVPF----------QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRS 668
GVPF + S+ L+ E + ++ +L+ +A++ Q +GRVIR
Sbjct: 599 IGVPFPPIQDLRVIGKQKYSESLMIYNEKTKTEEKLYNQPYLSIEAMKATNQAIGRVIRH 658
Query: 669 KADYGMMIFADKRYS 683
DYG++I D R++
Sbjct: 659 GKDYGVIILVDYRFA 673
>gi|294896832|ref|XP_002775733.1| helicase, putative [Perkinsus marinus ATCC 50983]
gi|239881998|gb|EER07549.1| helicase, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 138/184 (75%), Gaps = 2/184 (1%)
Query: 453 VITSGTLSPIDLYPRLLNF-HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
V+TSGTLSP+ +Y +LL VVS + +SL RDCI P+++TR +D + +S+ F R D
Sbjct: 1 VLTSGTLSPLSMYSKLLGLDRVVVSEALDISLERDCIRPLIVTRSND-VVLSSSFQSRKD 59
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD 571
V++ YG LL E+V +VPDG+VCFF S +M +++ TW DSG L + HK+VF ET D
Sbjct: 60 EEVSKCYGTLLEELVQVVPDGVVCFFTSKVFMQQVVRTWYDSGTLARLSTHKVVFFETDD 119
Query: 572 VVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
VV TT+AL NYR+ACD GRG +F +VARGKV+EGIDFDRHYGR V++FGVPFQY+LS+ L
Sbjct: 120 VVSTTIALSNYREACDQGRGGLFLAVARGKVSEGIDFDRHYGRAVVLFGVPFQYSLSRRL 179
Query: 632 LARL 635
ARL
Sbjct: 180 RARL 183
>gi|395506651|ref|XP_003757644.1| PREDICTED: regulator of telomere elongation helicase 1 [Sarcophilus
harrisii]
Length = 1361
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 191/780 (24%), Positives = 343/780 (43%), Gaps = 136/780 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YKCQEDYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHFK 64
Query: 54 SLITSYVLSK--------PENPV--------------------KLIYCTRTVHEMEKTLA 85
IT+ +++ P+ P+ K+IY +RT ++ + ++
Sbjct: 65 DTITARKIAERMQGVELFPDRPMSSWGNAATDGDTTAYYTDIPKIIYASRTHSQLSQVIS 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R K+ +G SR+ LC+N V E+ CRK+ ++
Sbjct: 125 EL--------RSTTYRPKVCVLG--SREQLCINPEVRKIESNHIQIHVCRKKVST----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ ++ L + ++DL G + CPY+L+R + Q A+++
Sbjct: 170 -------HSCHFYNNVEEKSTEKELVTPILDIEDLVKGGNRHKVCPYYLSRTLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ VC E+ S + L L
Sbjct: 223 FMPYNYLLDSKTRRAHNIDL-KGTVVIFDEAHNVEKVCEESASFDLTPFDL---ASGLDA 278
Query: 266 INQEIE-RFKATDAGRLRAEYN--------------------------RLVEGLALRGNL 298
INQ +E + K + AE+N +++ + L GN
Sbjct: 279 INQVLEEQTKLLQQNEIHAEFNMELDNSGLNMELEDIAKVKIILLKLENVIDAIELPGN- 337
Query: 299 PNAWLSNP-ALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL----ETENVEK-EGP 352
N ++ P + D+ EA + L L +++Q+L GR T ++K
Sbjct: 338 -NTGITKPGSYIFDLFAEAHI-TFQTKSSLLESLEQIIQFLAGRTGIFNNTAGLQKLVDI 395
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGF 412
+ V SI G+ + + + + + L+ ++ + T+
Sbjct: 396 IQIVFSIDRPEGVANPIMGHTVSKYYKVHIHLDTSNRKK-----------------TQRT 438
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNF 471
+ P ++ I L C +++ + + +++++TSGTL+PI + +
Sbjct: 439 DVWSAPVAKKQGKI----LSYWCFSPGFSMQELIQQEVRTIILTSGTLAPISSFTMEMQI 494
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
V + + I ++ +G D + +S+ +D R + GK + + +VP
Sbjct: 495 PFPVCLENPHVIDKHQIWVGIVPKGPDGVFLSSAYDKRFSEECLSSLGKTIGNIARVVPH 554
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR- 590
G++ FF SY M++ + W D ++I + K VF+E + T +D Y + C +
Sbjct: 555 GLLIFFPSYPVMEKSLEYWRDHDFARKIEELKPVFVEPRSKGGFTEVIDAYYEKIICPKS 614
Query: 591 -GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-- 647
GA F +V RGK +EG+DF GR VI+ G+PF + ++ ++++L D + K G
Sbjct: 615 NGAAFMAVCRGKASEGLDFADMNGRGVIITGLPFPPRMDPRVILKMQFL-DEMRGKSGTG 673
Query: 648 -------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
++ A R Q +GRVIR + D+G + D R++ +D R++LP W+ +++
Sbjct: 674 GQYLSGHEWYRQQASRAVNQAIGRVIRHRQDFGAIFLCDHRFTNNDARAQLPSWVRPYVK 733
>gi|332030654|gb|EGI70342.1| Regulator of telomere elongation helicase 1-like protein
[Acromyrmex echinatior]
Length = 976
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 201/796 (25%), Positives = 339/796 (42%), Gaps = 136/796 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK- 63
+ D+ V FP+ YP Q YM ++ L H +LE PTGTGKT+ LL S++L+K
Sbjct: 6 INDIIVTFPF-KPYPVQEEYMKKVIECLQNGQHGVLESPTGTGKTLNLLCSSLSWLLTKK 64
Query: 64 -----------------------------------PENPV-------KLIYCTRTVHEME 81
P+N K+IY +RT ++
Sbjct: 65 AQLQAQVIAGAIEKKDFGGNFFKYLTSGLEKAAGVPDNVQSFGWAIPKIIYASRTHSQLS 124
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK +H+ A L SR LC++ V + + C + S
Sbjct: 125 QAMYELK---KTSYKHVATAV------LGSRDQLCIHPEVSKETSSFNKIHMCHAKVKS- 174
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
TC +F N E V V ++DL G++ CPYFLA+ + Q
Sbjct: 175 -----------RTCFYFNNVEARKDDPVFKQEVLDIEDLVKVGQKHKCCPYFLAKELKQN 223
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
A++V Y YLLDPK ++Q +VV+ DEAHN++ VC EA S+ +
Sbjct: 224 ADIVFMPYNYLLDPKTRRSQGIDLQ-NTVVLLDEAHNVEKVCEEAASLQIS--------- 273
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+TD E +++ +A N +LS + D E + I
Sbjct: 274 -------------STDIAMCIDEVTAVMQDMAKDSEQQNDFLSENNVQKDFTAEDL--CI 318
Query: 322 RRAEHFLHVLRRLVQY-LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSL 380
+A FL + + + L+ R + + P ++ + + + ++L L
Sbjct: 319 LKA-MFLELEKAIDSIELKNRSDGDTF----PGGYIFELLEKIELTHGKEQIVVDKLDKL 373
Query: 381 MLTLEITDTDEFLHI-QTICDFATLVGT-YTRGFSII-------------IEPFDERMPH 425
+L L T T F + F+ L+ T + G SI I+ +++ +
Sbjct: 374 ILYLTTTSTSPFARKGNALQKFSDLLKTAFNSGASITRHKEKVKRCYKVHIQMEEQKKNY 433
Query: 426 IPD------------PVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFH 472
D ++ C ++ + ++ +SVV+TSGTLSP+ + L
Sbjct: 434 RNDVWESKKTTKTDGKLISYWCFSPGFGMEQMVEQGIRSVVLTSGTLSPLKPFISELGIP 493
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
V +T++ +C VL++G D P+++ ++ R+DP + G+ + IVP G
Sbjct: 494 IAVQLENPHIVTKEQVCVGVLSQGPDNHPLNSSYNTRNDPKYIASLGRTVYNFSCIVPHG 553
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR---KACDCG 589
++ FF SY M + W + G+ +I + K +++E ++ Y K C
Sbjct: 554 LLIFFPSYPIMKKCRDEWQNMGLWTQIAERKPIYVEPNSKDGFVNVMNEYYQKIKDPSC- 612
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQI-KEG- 647
+GAVF +V RGKV+EG+DF GR V++ G+PF ++ + YL + KEG
Sbjct: 613 KGAVFMAVCRGKVSEGLDFANANGRAVLIIGLPFPPLKDPRIMLKQRYLEEIRTTKKEGL 672
Query: 648 ---DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
++ +A R Q +GR+IR K+DYG +I D R+ + + +L W+ +++
Sbjct: 673 TGQEWYQLEASRAVNQAIGRIIRHKSDYGAVILCDCRFENPNFKKQLSAWLRPYIKKF-- 730
Query: 705 NLSTDMALHIAREFLR 720
+ M REF R
Sbjct: 731 -TNFGMITKELREFFR 745
>gi|326428226|gb|EGD73796.1| hypothetical protein PTSG_05489 [Salpingoeca sp. ATCC 50818]
Length = 1032
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 201/783 (25%), Positives = 335/783 (42%), Gaps = 145/783 (18%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL--SLITSY 59
+ K+ V V FP+ N Y Q +YM L +AL+ + +LE PTGTGKT+ LL SL
Sbjct: 4 MLKIGGVWVSFPH-NPYDLQTAYMNSLIQALNEGKNAMLESPTGTGKTLCLLCASLAWQE 62
Query: 60 VLSK-----------------------------------------------PENPVK--- 69
+K P NP +
Sbjct: 63 QFTKALTAQAEEDAAKAKAKAMAAGLGGGQGPHQGWQASGTGYEQQHQQHQPGNPAQGFT 122
Query: 70 --------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
+IY TRT ++ +T+AELK +Y+ I +G SR+ LC+N V
Sbjct: 123 PQKPKAPRIIYATRTHSQIAQTIAELKRT-SYK-------PNICVLG--SREQLCINPEV 172
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLR 181
+ + CR + AS + C ++ K + G+ ++DL
Sbjct: 173 SRLDTNAAKTRTCRHKVAS------------QECSYYFQVPK-GKKDLADHGIADIEDLV 219
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
G+ CPY+LAR ++ A +V Y Y+L+ + +++ SVV+ DEAHNI++
Sbjct: 220 KIGRSASCCPYYLARDGLESAQLVFVPYNYILNSRTRRNQRIDVET-SVVILDEAHNIES 278
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA---GRLRAEYNRLVEGLALRGNL 298
VC +A S + +T +L+ + E+ R DA G L A+ + + L L+
Sbjct: 279 VCEDASSFDL-------STTDLAAFSNELARLSTADAEVLGELTADDAKALHKLVLQIE- 330
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV------EKEGP 352
D L + ++R+ F+ R + L ET V +
Sbjct: 331 ---------EKLDALPVKIGAPMQRSGDFIF---RFFEGLNMTFETVQVILPKVEQAADA 378
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDT----DEFLHIQTICDFATLVGTY 408
V + S H LR L+ E D ++ ++
Sbjct: 379 VGALKSSRCHLSKFADILR--------LLFGAETKDNLAMIRQYYYVNVSESKRQQQQQQ 430
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF-DRFQSVVITSGTLSPIDLYPR 467
G+++ + R + C +S A+K + D +SVV+TSGTLSP+D +
Sbjct: 431 QSGWAVAAPAGNPR-------TISFWCFTSSFAMKSLIQDGVRSVVLTSGTLSPLDTFAA 483
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
L + +++ + VLT G ++ + RS P + G +V
Sbjct: 484 ELMVDFPIRLENPHIISKKQVWAGVLTCGPRGHELNASYTTRSSPAYQADLGNAIVNFAR 543
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDS---GILKEIMQHKLVFIETQDVVETTLALDN-YR 583
+VP G++ FF SY +M + I W S I +I ++K +E Q+ E A++ Y+
Sbjct: 544 VVPKGLLVFFPSYGFMRQCIEGWQQSSGRSIWDQIAEYKKPVVEPQNKHEFVAAMEVFYQ 603
Query: 584 KACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL----- 638
+ + G+VFF+V RGKV+EG+DF GR VI+ G+P+ + +L + ++L
Sbjct: 604 QLKEPDAGSVFFAVCRGKVSEGLDFADENGRAVIITGLPYPAAMDPRVLLKKKFLDRMKA 663
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
+ T ++ + + A R Q +GRVIR + DYG +I AD R+ R R++LP W+ +H
Sbjct: 664 QGTMRLSGQHWYSTQATRAVNQAIGRVIRHRKDYGAIILADTRFKR--TRNQLPAWLRAH 721
Query: 699 LRD 701
+++
Sbjct: 722 VQE 724
>gi|307197478|gb|EFN78712.1| Regulator of telomere elongation helicase 1 [Harpegnathos saltator]
Length = 963
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 196/776 (25%), Positives = 337/776 (43%), Gaps = 134/776 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK- 63
+ D+ V FP+ Y Q YM ++ L H +LE PTGTGKT++LL S++L+K
Sbjct: 6 INDIIVSFPF-KPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKTLSLLCSSLSWLLAKK 64
Query: 64 ---------------------------------PENPV-------KLIYCTRTVHEMEKT 83
P+NP K+IY +RT ++ +
Sbjct: 65 AQLQAQVIAIEKKDLGGNFFKHLTSGLEKAAGVPDNPQNFGWAMPKIIYASRTHSQLSQA 124
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
+ ELK +H+ A L SR LC++ V + C + S
Sbjct: 125 MHELK---RTSYKHIPTAV------LGSRDQLCIHPEVSKEPTTFNKIHMCHSKVKS--- 172
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
TC +F N E V ++DL G++ CPYFLA+ + Q A+
Sbjct: 173 ---------RTCFYFNNVEARKDDPTFRQEVLDIEDLVKAGQKHKCCPYFLAKELKQSAD 223
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+V Y YLLDPK ++Q +VV+ DEAHN++ VC EA S+ +
Sbjct: 224 IVFMPYNYLLDPKTRKSQGIDLQ-NTVVLLDEAHNVEKVCEEAASLQI------------ 270
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRR 323
+TD E ++ ++ L N +L+ + D E + I +
Sbjct: 271 ----------SSTDVAMCIDEVTGVMRDISKEVELQNDFLTENNVQKDFTAEDL--CILK 318
Query: 324 AEHFLHVLRRLVQY-LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLML 382
A FL + + + L+ R E + + P F+ + A + + E+L ++L
Sbjct: 319 A-MFLELEKAIDSIELKNRNEGDTL----PGGFIFELLEKAQLTHGKEQIVVEKLEKIIL 373
Query: 383 TLEITDTDEFLHI-QTICDFATLVGT-YTRGFSII-------------IEPFDERMPHIP 427
L T F + F+ L+ T + G S+ I+ +++ +
Sbjct: 374 YLTTISTSPFTRKGNALQKFSDLLKTAFNSGISVARHKEKVMRCYKVHIQIEEQKKNYKN 433
Query: 428 D-------------PVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHP 473
D ++ C ++ + ++ +SVV+TSGTLSP+ + L
Sbjct: 434 DVWESKKTTTKTDGKLISYWCFSPGFGMQQMVEQGVRSVVLTSGTLSPLKPFISELGIPI 493
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
V +T++ +C VL++G D P+++ ++ R+DP + G+ L IVP G+
Sbjct: 494 AVQLENPHIVTKEQVCVGVLSQGPDNHPLNSSYNTRNDPKYIASLGRTLYNFSCIVPHGL 553
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE--TQDVVETTLALDNYRKACD--CG 589
+ FF SY M + W + G+ +I + K +++E ++D + + Y+K D C
Sbjct: 554 LIFFPSYPIMRKCRDEWQNMGLWTQISERKPIYVEPNSKDGFVNVMN-EYYQKIKDPLC- 611
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQI-KEG- 647
+GA+F +V RGKV+EG+DF GR V++ G+PF ++ + YL + K+G
Sbjct: 612 KGAIFMAVCRGKVSEGLDFANANGRAVLIIGLPFPPLKDPRVMLKQRYLEEIRTTEKQGL 671
Query: 648 ---DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
++ +A R Q +GR+IR K DYG +I D R+ + + +L W+ +++
Sbjct: 672 TGQEWYQLEASRAVNQAIGRIIRHKNDYGAVILCDCRFENPNFKKQLSAWLRPYIK 727
>gi|361125600|gb|EHK97634.1| putative DNA repair helicase RAD3 [Glarea lozoyensis 74030]
Length = 250
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 145/210 (69%), Gaps = 15/210 (7%)
Query: 543 MDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKV 602
M+ II+ W GIL E+ ++KL+ +ET D ET+LAL+ YR AC GRGA+ VARGK
Sbjct: 1 MESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVARGK- 59
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCV 662
YGR V+ GVPFQYT S+IL ARLE+LR+T++IKE DFL+FDA+R AAQC+
Sbjct: 60 ---------YGRTVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCL 110
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
GRV+R K DYG+M+ ADKR+ R KR++LP WI + DA ++LSTDMA+ A++FLR M
Sbjct: 111 GRVLRGKDDYGIMVLADKRFLR--KRTQLPKWINEAILDAEVDLSTDMAVGTAKKFLRTM 168
Query: 723 AQPY---DKAGSIGRKTLLSQADLEKMTND 749
AQP+ D+ G + +A EKM N+
Sbjct: 169 AQPFPSLDQDGVSTWRIEDLEAHKEKMENE 198
>gi|260789809|ref|XP_002589937.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
gi|229275123|gb|EEN45948.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
Length = 823
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 200/778 (25%), Positives = 341/778 (43%), Gaps = 121/778 (15%)
Query: 1 MIF-KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLI--- 56
M+F K+ V V FP++ Y Q SYM ++ + L + +LE PTGTGKT+ LL
Sbjct: 1 MVFLKVRGVDVEFPFEP-YACQRSYMEKVIQCLQEGTNGVLESPTGTGKTLCLLCATLAW 59
Query: 57 -TSYV-----------LSKPEN---------------------------PV----KLIYC 73
++YV +K E+ P K+IY
Sbjct: 60 RSAYVAKMQFEGLKQQFTKDEDGQSTYGELLANQLGGAAGWGNTEQAAGPFMEIPKIIYA 119
Query: 74 TRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA 133
+RT ++ + +AELK N +L K+ +G SR+ LC++ V N +
Sbjct: 120 SRTHSQLSQAVAELK---NTSYSNL----KVCILG--SREQLCIHPEVQEQTNNSTKVHM 170
Query: 134 CRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYF 193
C+ +T+S + C F+ N + P ++DL GK+ CPYF
Sbjct: 171 CKAKTSSRL------------CTFYNNLDGNEKEFTEAP--LDIEDLVKVGKKHKVCPYF 216
Query: 194 LARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRR 253
+AR + A+++ Y YLLDPK S ++ K +VVFDEAHN++ +C E+ S +
Sbjct: 217 MARELKSSADIIFMPYNYLLDPKSRKAHSVDL-KSHIVVFDEAHNLEKMCEESSSFDLTS 275
Query: 254 QTLEGATRNLSRI----------NQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWL 303
L L + N++ +T ++ L+ L G L
Sbjct: 276 YDLASCVEELDNLHKSVAEIEVLNEKFHTESSTHGLVCLYDFYFLLNVSFLVGMLLELEK 335
Query: 304 SNPALPSDILKEAVPGN---IRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
+LP +P N + R F++ L L+ +T + E VA T
Sbjct: 336 KIDSLP-------LPANGTGLTRPGSFIY---ELFAELQITFDTAPILLEVLDKVVAYAT 385
Query: 361 AHAGIDQKTLRFCYER--LHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ G ++ F + + L L+I + + Q A L+ Y + + E
Sbjct: 386 TNTGT---SVVFGNKAAGVSKLGDVLKIAFSHDSSASQKGSKLANLMAKYYKVYVKTEEG 442
Query: 419 FDERMPHIPDP--------------VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPID 463
F ++ DP L C A++ + + +S+++TSGTLSP++
Sbjct: 443 FQKKSKANADPWATTSSSKPKKQGRTLSYWCFSPGHAMQDLANHGVRSIILTSGTLSPLE 502
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLV 523
+ ++ V + R + ++T+G D + +++ ++ R+ + G +V
Sbjct: 503 SFTAEMHIDFPVHLENPHVIERHQVWLGMVTKGPDGVRLNSSYENRNSTDYINSLGNAIV 562
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN-Y 582
IVP+G++ FF SY M++ + W DSGI I Q+K + +E + + A++ Y
Sbjct: 563 NFARIVPNGLLVFFPSYPVMNKCLEVWQDSGISNRISQYKTMVVEPRGKTQFVEAMEQFY 622
Query: 583 RKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT 641
K D GA FF+V RGKV+EG+DF GR V++ G+PF + ++ ++ +L +
Sbjct: 623 EKINDPTLNGAAFFAVCRGKVSEGLDFADINGRAVVITGLPFPPRMDPKVMLKMSFLDEG 682
Query: 642 FQIKEG----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+G + A R Q +GRVIR + DYG ++ D R++ D R++LP W+
Sbjct: 683 KTASKGLTGRQWYRQQASRAVNQAIGRVIRHRQDYGAILLCDHRFTYADARAQLPSWV 740
>gi|399218668|emb|CCF75555.1| unnamed protein product [Babesia microti strain RI]
Length = 838
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 194/756 (25%), Positives = 355/756 (46%), Gaps = 114/756 (15%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENP 67
+ V FPY IY Q + + R+++ + L+E PTGTGKT+ LL +Y+ K
Sbjct: 11 IDVQFPY-KIYEPQKLLIEAIIRSIEYGQNALIESPTGTGKTLCLLCASLAYLCDKRIPG 69
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNY-QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
+K+IY TRT ++ + E K + Y + R +G A IL SR LC++S+ +
Sbjct: 70 LKIIYTTRTHGQLNHFINEFKKVPYYDRLREIGINATILG----SRDKLCIHSQCSKMKG 125
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENY-EKAASAAVLPPGVYTLQDLRAFGK 185
+++D C+ AL + TC ++ Y K + + V ++DL + GK
Sbjct: 126 -NALDGYCK--------ALV----HTRTCTYYNGYRSKEYNNLNILMDVMDVEDLTSMGK 172
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIE 245
+ G+CP+++ R + +N ++ Y YL + I ++ +++++ DEAHNID+
Sbjct: 173 KYGFCPFYVMREAHKTSNFILMPYNYLFCQTIRDSIELDLN-DAIIIIDEAHNIDDFAER 231
Query: 246 ALSVSVRR----QTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA 301
+S ++ + ++++ R ++ +N+++ + D L N+L+ A L +
Sbjct: 232 VMSFNIYQMDVIRSIDFLKRIITTVNEDMYNKEKDDNPYL----NKLLSLYATLQRL-DC 286
Query: 302 WLSNPALPSDILKEAVPGNIRRAE-HF--------------LHVLRRLVQYLRGRLETEN 346
+LS+ L ++ + I+R + H+ + +L L + + +
Sbjct: 287 FLSSLDLDNNRMMHK----IKRVDFHYTVGKVGDDFVIFDTISILNTLTSAILDKNSQNS 342
Query: 347 VEKE-GPVSFV-------ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTI 398
+E+E G ++F+ S + I+ +++ +RL + +L L T ++L
Sbjct: 343 LEQEFGCLTFIMATKISDESFNKNVNIEIQSI----DRLKNSLLQL----TSQWLRANCQ 394
Query: 399 CDFATL-VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA-VKPVFDRFQSVVITS 456
+A L + T + L C +AS K ++ +++++TS
Sbjct: 395 HFYAVLRIDTGNNNNKFMYRS------------LLFECMNASCTFTKLKNEKIRNLILTS 442
Query: 457 GTLSPID-----------LYPRLLNFHPVVSR--------SFKMSLTRDCICPMVLTRGS 497
GTLSPID +P +L ++S S K+ + R+ V
Sbjct: 443 GTLSPIDNFISNISGGYIKFPIVLENEHIISSDRVWVGCISSKLKIFRERFRDKV-GNFE 501
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
DQ +ST + RS G LL V VP GI+CFF SY+ M+E I W ++GI
Sbjct: 502 DQQLIST-YSTRSSHEYIVKLGILLKLFVKSVPGGILCFFPSYTNMNETIEVWKNTGIYH 560
Query: 558 EIMQHKLVFIETQDVVETTLALDN----YRKACDCGRGAVFFSVARGKVAEGIDFDRHYG 613
+ +KL+FIE ++ ++D+ ++ D GRGA+FF+V RGK+AEG+DF Y
Sbjct: 561 NLYSYKLIFIEVVKSTDSNDSIDDNLNSFKNVVDSGRGALFFAVFRGKIAEGVDFPNDYC 620
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQ--------IKEG--DFLTFDALRQAAQCVG 663
R + + G+P+ + ++ Y+R+T +++G ++ A++ Q +G
Sbjct: 621 RGIFICGIPYPNPHDFRVSLKMNYIRNTQNNSTDVVNALRDGTYNWHVLSAIKAVNQAMG 680
Query: 664 RVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
R IR DYG ++ AD RY + + +L W+L L
Sbjct: 681 RCIRHADDYGAILLADVRYEYKNIQVQLSKWVLKSL 716
>gi|157120352|ref|XP_001653621.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|122117342|sp|Q16X92.1|RTEL1_AEDAE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|108875002|gb|EAT39227.1| AAEL008960-PA [Aedes aegypti]
Length = 1010
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 189/799 (23%), Positives = 355/799 (44%), Gaps = 151/799 (18%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+++ +TV FP++ Y Q YM + L + +LE PTGTGKT++LL ++VL
Sbjct: 4 YQINGITVNFPFEP-YQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLH 62
Query: 63 K----------------------------------------------PENPV----KLIY 72
K PE K++Y
Sbjct: 63 KKAQVQANMRTNITDLKEFEMVQRKKLGGDGGSGMEELLDKLHDGCGPEGAKWGVPKIVY 122
Query: 73 CTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDA 132
+RT ++ + + E+K T + + + + L SR LC++ V E +
Sbjct: 123 ASRTHSQLTQVMQEMK-----NTSY----SFMKGVILGSRDQLCIHPEVSKEEGNSTKTN 173
Query: 133 ACRKRTASWVRALAAENPNIETCEFFENYEKAAS-AAVLPPGVYTLQDLRAFGKQQGWCP 191
C+ + S TC F+ E V+ + ++DL G + CP
Sbjct: 174 LCKAKVQS------------RTCSFYSRVESCKERPEVVSNVIMDIEDLVKVGTKVRACP 221
Query: 192 YFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSV 251
+FL++ +++ A+++ Y YLLDPK + E+ ++++ DEAHN++ +C E+ S+ +
Sbjct: 222 FFLSKELIESADILFMPYNYLLDPKARKANNLEISN-TIIILDEAHNVEKMCEESASMQI 280
Query: 252 RRQTLEGATRNLSRI-------------NQEIERFKATDAGRLRA---EYNRLVEGLALR 295
R + +++ I ++ + F D L+ + + V+ + +
Sbjct: 281 RSTDIALCIDDVTSIMKVMDHSVAIPEDDETKKDFTIDDLALLKEMLLQLEKTVDSIPVM 340
Query: 296 ----GN-LPNAWLSNPALPSDILKEAVPGNIRRAEHFL--HVLRRLVQYLRGRLETEN-V 347
GN P ++ +I ++A NI+ + + +L ++QY+ E N V
Sbjct: 341 FSQGGNTFPGTYIF------EIFEKA---NIKEGNYHIIAQLLENIIQYIATITEKNNFV 391
Query: 348 EKEGPVSFVAS----ITAHAGIDQK-TLRFCYERLHSLMLTLEITDTDEFLHIQTICDFA 402
+ G + +A I A +G + + ++ CY ++H +EI + +
Sbjct: 392 RRGGGLQILAEALSIIFAGSGPEYRASIDKCY-KVH-----IEIEEQKK----------- 434
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPD-----PVLQLSCHDASLAVKPVFDR-FQSVVITS 456
TRG + + +P V+ C + ++ + R +S+++TS
Sbjct: 435 ------TRGNVKQADGWTATKQLVPSVKANAKVVSFWCFNPGFGMRQLLGRNARSIILTS 488
Query: 457 GTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
GTL+P+ L+ V + +C ++ +G D+ +++ + R +P
Sbjct: 489 GTLAPLKPLISELDIPIAVRLENPHIIDGSQVCVKIVGQGPDKESLNSSYGNRDNPKYIS 548
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET--QDVVE 574
+ G+ ++ I+P G++ FF SY +++ W ++GI +I + K +F+E +D
Sbjct: 549 SLGRTILSFCPIIPGGLLVFFPSYPLLNKCQEAWQETGIWAQISRTKPIFVEPRGKDQFL 608
Query: 575 TTLALDNYRKACDC-GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA 633
T++ + Y+K D G+GAVF +V RGKV+EG+DF GR VI+ G+PF ++
Sbjct: 609 NTMS-EYYQKINDPDGKGAVFMAVCRGKVSEGLDFADMNGRAVIITGLPFPPLKDARVIL 667
Query: 634 RLEYLRDT----FQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ +YL++ +I GD + + +A R Q +GRVIR K DYG ++ D R+ H ++
Sbjct: 668 KKKYLQEVRTRENEIISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNHRQK 727
Query: 689 SKLPGWILSHLR-DAHLNL 706
S+L WI HL + H N
Sbjct: 728 SQLSSWIQKHLNTNQHQNF 746
>gi|340374870|ref|XP_003385960.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 717
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 191/735 (25%), Positives = 323/735 (43%), Gaps = 112/735 (15%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-- 59
I +E+V V FP+ YP Q YM ++ +AL + +LE PTGTGKT++LL S+
Sbjct: 9 IHVIENVPVSFPF-TPYPCQIEYMEKVIKALQNNTNAILESPTGTGKTLSLLCATLSWRQ 67
Query: 60 -----------VLSKPENPV----KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKI 104
+ S + P+ K+IY +RT ++ + + ELK + P I
Sbjct: 68 QLPAPVISEWDLQSDSKGPLGGRPKIIYASRTHSQLSQAIHELK------STSYRPKVSI 121
Query: 105 LAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKA 164
+ SR LC+NS V++ ++ AC + A+ ++C ++ N +
Sbjct: 122 IG----SRDQLCINSEVMSKDSNAEKVHACHAKVAA------------KSCTYYNNVD-- 163
Query: 165 ASAAVLPPG-VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
+P G + +++L G + CPY+LAR M A+++ Y Y+LD + +
Sbjct: 164 LKRLSVPEGFIPDIEELVGMGTKNKMCPYYLAREMKTEADLIFMPYNYILDLRTRLVHGI 223
Query: 224 EMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRA 283
+ +VV+ DEAHNI+ VC ++ S + + +++ + L+
Sbjct: 224 NITN-TVVILDEAHNIERVCEDSSSFELTSTDIAHCIKDIDYL--------------LKN 268
Query: 284 EYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE 343
+Y E L+ L + A N++ E FL + L + L+
Sbjct: 269 KYEEAKEYLSELDTQTQNTLKDLA------------NLK--ELFLCLEDSLDKI---ELK 311
Query: 344 TENVEKEGPVSFVASITAHAGIDQKT----LRFCYERLHSLM----LTLEITDTDEFLHI 395
+EN E P S++ AGI +T + C + + SL L T+ +FL
Sbjct: 312 SENNECVKPGSYIFEFLGKAGITTETHVVLIDQCSQAIASLTSDQSLHRTSTNLQKFLEA 371
Query: 396 QTICDFATLVGTYTR------GFSIIIEPFDERMPHIPDPV------------LQLSCHD 437
I + TR + + I+ + + D L C +
Sbjct: 372 IKIVFSGSCPAGMTRERMASLHYRVYIKSDNNKRKKKSDVWTTDNNTDDTCRRLCYWCFN 431
Query: 438 ASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
A+ + + +SV++TSGTLSP++ + L VS + +D + V+++G
Sbjct: 432 PGYAMTELVRQGVRSVILTSGTLSPLESFTSELQLEFPVSLQGSHVIGKDQVWVGVVSKG 491
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND-SGI 555
D + +++ + R P + G LV I+PDG++ FF SY M+ ++ W + S I
Sbjct: 492 PDNVHLNSSYQTRFTPAYMDSLGNTLVNFFRIIPDGVLVFFPSYVVMETLVTHWKEHSNI 551
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR--GAVFFSVARGKVAEGIDFDRHYG 613
+ QHK +F E + E + Y + G FF V RGKV+EG+DF + G
Sbjct: 552 FMRMEQHKQIFKEPKFKNEFNSVMSAYYEKIGSADKVGGAFFGVCRGKVSEGLDFADNNG 611
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRD-------TFQIKEGDFLTFDALRQAAQCVGRVI 666
R VI+ G+P+ + ++EYL+D T I + + A R Q +GRVI
Sbjct: 612 RAVIITGLPYPPFAEPKVQLKMEYLKDARSNFNRTELITDKQWYNQQATRAVNQAIGRVI 671
Query: 667 RSKADYGMMIFADKR 681
R K DYG +I D+R
Sbjct: 672 RHKNDYGAIILCDER 686
>gi|194888991|ref|XP_001977003.1| GG18780 [Drosophila erecta]
gi|229891622|sp|B3NSW1.1|RTEL1_DROER RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190648652|gb|EDV45930.1| GG18780 [Drosophila erecta]
Length = 985
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 181/760 (23%), Positives = 338/760 (44%), Gaps = 104/760 (13%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE-- 65
+ V+FP++ YP Q +YM ++ + L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEH 67
Query: 66 -------------------------------------NPVKLIYCTRTVHEMEKTLAELK 88
K+IY +RT ++ + + ELK
Sbjct: 68 QQQMVKIEKADFSGLAGGATGGELSDLGKTMGRANNWGVPKVIYASRTHSQLTQAMRELK 127
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
+T + A + ++ L SR LC++ V+ + + C+ R S
Sbjct: 128 -----RTAY----ANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHS-------- 170
Query: 149 NPNIETCEFFENYEKAASAAVL-PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+TC F E L P + ++DL G++ CPYF +R +V A++
Sbjct: 171 ----KTCTFQMRVESRKDHPDLRGPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFM 226
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YLLDPK E+ ++V+ DEAHNI+ +C E+ SV ++ + A +++ I
Sbjct: 227 PYNYLLDPKARKANKIEL-GNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIM 285
Query: 268 QEIERFKATD-AGRLRAEYN----------RLVEGLALRGNLPNAWLSNPALPSDILKEA 316
Q ++ D AG ++ L A+ + + P+ ++ E
Sbjct: 286 QVFASGESQDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAVVVDNAAEGTTFPASLMYEL 345
Query: 317 VP------GNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI-TAHAGIDQKT 369
+ GN+ + +L +LVQYL + ++ K G + ++ + T Q
Sbjct: 346 LGKANFTYGNV---ATIVSLLDKLVQYLLVASQQMSIRKGGTFTMLSDLLTIVFANKQDV 402
Query: 370 LRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDP 429
+ Y S + +++ ++ + Q A G + +I ++ I
Sbjct: 403 MSKVYA---SFKVHVQMEESKQGHGKQ---QGAKQQGGWLGKGTIAAASGTSKVAKI--- 453
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
+ C + ++ + + + +SV++TSGTL+P L P + V++ + + +
Sbjct: 454 -INFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQS 510
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + + R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 511 QVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKC 570
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GAVF +V RGKV+EG+
Sbjct: 571 VDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGL 630
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQC 661
DF GR VI+ G+PF ++ + YL R+ + ++ DA R Q
Sbjct: 631 DFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQA 690
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
+GRVIR + DYG ++ D R+ + +L WI HL D
Sbjct: 691 IGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGD 730
>gi|334312296|ref|XP_001375942.2| PREDICTED: regulator of telomere elongation helicase 1 [Monodelphis
domestica]
Length = 1605
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 191/774 (24%), Positives = 339/774 (43%), Gaps = 124/774 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 ISGVTVDFPFQP-YKCQEDYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWREHFK 64
Query: 54 SLITSYVLSK--------PENPV--------------------KLIYCTRTVHEMEKTLA 85
IT+ +++ P+ P+ K+IY +RT ++ + ++
Sbjct: 65 DTITARKIAERMQGVELFPDRPMSSWGNAATDGDTTAYYTDIPKIIYASRTHSQLTQVIS 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC+N V E+ CRK+ ++
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCINPEVRKIESNHIQIHVCRKKVST----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ ++ L + ++DL G + CPY+L+R + Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSTEKELVTSILDIEDLVKSGNKHRVCPYYLSRTLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVR-----------RQ 254
Y YLLD K + ++ K +VV+FDEAHN++ VC E+ S + Q
Sbjct: 223 FMPYNYLLDSKTRRAHNIDL-KGTVVIFDEAHNVEKVCEESASFDLTPFDLASGLDAINQ 281
Query: 255 TLEGATRNL---------------SRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP 299
LE T+ L S +N E+E L+ E +++ + L GN
Sbjct: 282 VLEEQTKLLQQNEIHAQFNMELDNSGLNMELEDIAKVKIILLKLE--SVIDAIELPGN-- 337
Query: 300 NAWLSNP-ALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
N ++ P + D+ EA + L L +++Q++ GR G + A
Sbjct: 338 NTGMTKPGSYIFDLFAEAH-ITFQTKSSLLESLEQIIQFMAGRT--------GIFNNTAG 388
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ I Q + F E ++ ++ + D + T+ P
Sbjct: 389 LQKLVDIIQ--IVFSIEPPEGAANLMQGHTVSKYYKVHIHLDSSNR--KKTQRTDAWTAP 444
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
++ I L C ++ + + +++++TSGTL+PI + + V
Sbjct: 445 VAKKQGKI----LSYWCFSPGFSMHELIQQGVRTIILTSGTLAPISSFSMEMQIPFHVCL 500
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
+ + I ++ +G D + +S+ +D R + GK + + +VP G++ FF
Sbjct: 501 ENPHVIDQHQIWVGIVPKGPDGVLLSSAYDKRFSDECLSSLGKTIGNIARVVPHGLLVFF 560
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFF 595
SY M++ + W D +++ + K +F+E + T +D Y + C GA F
Sbjct: 561 PSYPVMEKSLEYWRDHDFARKMEELKAIFVEPRSKGGFTEVIDAYYEKIVCPKSNGATFM 620
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE---GDFLTF 652
+V RGK +EG+DF GR VI+ G+PF + ++ ++++L D + K G +LT
Sbjct: 621 AVCRGKASEGLDFADMNGRGVIITGLPFPPRMDPRVILKMQFL-DEMRGKSGAGGQYLTG 679
Query: 653 ------DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q +GRVIR + D+G + D R++ D R++LP W+ +++
Sbjct: 680 HEWYRQQASRAVNQAIGRVIRHRQDFGAIFLCDHRFTNSDARAQLPSWVRPYVK 733
>gi|328719600|ref|XP_001948918.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Acyrthosiphon pisum]
Length = 946
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 179/764 (23%), Positives = 335/764 (43%), Gaps = 116/764 (15%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F+ V V FPY+ Y Q Y+ ++ L + +LE PTGTGKT++LL +++L+
Sbjct: 4 FECRGVLVDFPYEP-YEVQKRYIEKVLECLQNGHNGVLESPTGTGKTLSLLCSSLAWLLA 62
Query: 63 K-----------------------------PEN-------PVKLIYCTRTVHEMEKTLAE 86
K P + P ++IY +RT ++ + + E
Sbjct: 63 KKAAIQANRMCPTESNLTISINTAAGVDKNPNSAWNGVIRPPRIIYGSRTHTQLNQVMKE 122
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ NY +H+ K+ IG SR LC++ V A CR + ++
Sbjct: 123 LRRT-NY--KHM----KVGIIG--SRDQLCIHPEVTKEATSSVKIALCRAKVST------ 167
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
TC+F+ N E + A + G+ ++DL GK+ CPY+ +R + + +++
Sbjct: 168 ------RTCQFYNNVELKSKDAFVENGIADIEDLVNKGKKFNCCPYYGSRELQKDVDILF 221
Query: 207 YSYQYLLDPKVAGIISKEMQ-KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y Y++DP+ ++++Q + V++ DE HN++ +C E+ SV + + ++
Sbjct: 222 TPYNYIIDPRTRK--AQDIQFSDDVIILDEGHNVEKMCEESCSVDISSTDIALCIDAVTD 279
Query: 266 INQEI-----------------ERFKATDAGRLRA---EYNRLVEGLALRGNLPNAWLSN 305
I +++ F D L+A E ++++G+ L + + +
Sbjct: 280 IMKQLYDEKNTEFSTEPIQLKPREFSDDDICVLKALFLEIEKVIDGIELTNSTNDKKMEG 339
Query: 306 PALPSDILKEA--VPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHA 363
+ +L+ A P N+ + F+ L + Y+ A A
Sbjct: 340 SYI-FKLLQGADITPSNMSK---FISFLSSVTLYMSSSNSN------------APHQAKE 383
Query: 364 GIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERM 423
K +F L SL + +TD++ + + + SI ++ F +
Sbjct: 384 ACLYKFQQFLECVLQSLGTNGDPKNTDKYFRTYIQLEQSKY---KPKNDSIKLKEFKK-- 438
Query: 424 PHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
L C ++ + DR + +++TSGTLSP+ + V
Sbjct: 439 ----GKTLNFWCFSPGFGMRDLLDRNVRCIILTSGTLSPLAATISEIGIPVKVQLQNAHV 494
Query: 483 LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSY 542
+ +C V+ G P+ + R++ + G+ LV I+P G + FF SY +
Sbjct: 495 IKNSQVCVSVIKSGPSNKPLICNYTSRNNSDFLTSLGQTLVNFSRIIPGGTLVFFPSYPF 554
Query: 543 MDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKV 602
+D+ + W I I ++K +F+E ++ ++ Y KA +GA+ +V RGKV
Sbjct: 555 LDQCVNHWQGCNIWASITKNKSIFVEPKNKDVLNSVIEEYYKAIQENKGAILLAVYRGKV 614
Query: 603 AEGIDFDRHYGRLVIMFGVPF-QYTLSKILLARLEYL----RDTFQIKEG-DFLTFDALR 656
+EG+DF R VI+ G+P+ Y ++++ R EYL ++ Q G ++ +A++
Sbjct: 615 SEGLDFSDWKARAVIILGLPYPPYQDPRVVMKR-EYLDEMRKENSQCLSGQEWYKLEAIK 673
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR D+G +IF D+RY+ + +S+L W+ H++
Sbjct: 674 AVNQAMGRVIRHIGDWGSIIFCDERYASFNIKSQLSAWLQPHIK 717
>gi|24639946|ref|NP_572254.1| CG4078, isoform A [Drosophila melanogaster]
gi|442615242|ref|NP_001259262.1| CG4078, isoform B [Drosophila melanogaster]
gi|75027961|sp|Q9W484.1|RTEL1_DROME RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|7290625|gb|AAF46074.1| CG4078, isoform A [Drosophila melanogaster]
gi|60677863|gb|AAX33438.1| RE31401p [Drosophila melanogaster]
gi|220952186|gb|ACL88636.1| CG4078-PA [synthetic construct]
gi|440216460|gb|AGB95108.1| CG4078, isoform B [Drosophila melanogaster]
Length = 985
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 181/762 (23%), Positives = 336/762 (44%), Gaps = 108/762 (14%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE-- 65
+ V+FP++ YP Q +YM ++ L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEH 67
Query: 66 -------------------------------------NPVKLIYCTRTVHEMEKTLAELK 88
K+IY +RT ++ + + ELK
Sbjct: 68 QKQMVKMEKADFSGLGGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAMRELK 127
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
+T + A + ++ L SR LC++ V+ + + C+ R S
Sbjct: 128 -----RTAY----ANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHS-------- 170
Query: 149 NPNIETCEFFENYEKAASAAVL-PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+TC F E L P + ++DL G++ CPYF +R +V A++
Sbjct: 171 ----KTCSFQMRVESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFM 226
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YLLDPK E+ ++V+ DEAHNI+ +C E+ SV ++ + A +++ I
Sbjct: 227 PYNYLLDPKARKANKIEL-GNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIM 285
Query: 268 QEIERFKATD-AGRLRAEYN----------RLVEGLALRGNLPNAWLSNPALPSDILKEA 316
Q ++ D AG ++ L A+ + + + P+ ++ E
Sbjct: 286 QVFASGESQDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAIVVDNAVDGTTFPASMMYEL 345
Query: 317 VP------GNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA---SITAHAGIDQ 367
+ GN+ + +L +LVQYL + ++ K G + ++ +I D
Sbjct: 346 LGKANFTYGNV---ATIVSLLDKLVQYLLVASQQMSIRKGGTFTLLSDLLTIVFANKEDV 402
Query: 368 KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIP 427
+ + ++H L+ +E A G + +I ++ I
Sbjct: 403 MSKVYASFKVHVLV--------EESKQGHGKQQGAKQQGGWLGKGTIAAATGLSKVAKI- 453
Query: 428 DPVLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LT 484
+ C + ++ + + + +SV++TSGTL+P L P + V++ + +
Sbjct: 454 ---INFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVD 508
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ + ++ G D+ + + + R +P + G+ ++ + IVPDG++ FF SY ++
Sbjct: 509 QSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLN 568
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
+ + W SG+ +I K +F+E + + T ++ + +A +GAVF +V RGKV+E
Sbjct: 569 KCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSE 628
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAA 659
G+DF GR VI+ G+PF ++ + YL R+ + ++ DA R
Sbjct: 629 GLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLSGQEWYNLDATRAVN 688
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
Q +GRVIR + DYG ++ D R+ + +L WI HL D
Sbjct: 689 QAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGD 730
>gi|307176988|gb|EFN66294.1| Regulator of telomere elongation helicase 1 [Camponotus floridanus]
Length = 978
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 195/801 (24%), Positives = 341/801 (42%), Gaps = 146/801 (18%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK- 63
+ D+ V FP+ Y Q YM ++ L H +LE PTGTGKT++LL S++L+K
Sbjct: 6 INDIIVSFPF-KPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKTLSLLCSSLSWLLTKK 64
Query: 64 -----------------------------------PENPV-------KLIYCTRTVHEME 81
P+N K+IY +RT ++
Sbjct: 65 AQLQAQVIAGAIEKKDFGGHFFKYLVDGLEKASGVPDNVQSFGWAMPKIIYASRTHSQLS 124
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK +H+ A L SR LC++ V + + C + S
Sbjct: 125 QAMYELK---KTSYKHVATAV------LGSRDQLCIHPEVSKEASAFNKIHMCHSKVKS- 174
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
TC ++ N E V V ++DL G++ CPYFLA+ + Q
Sbjct: 175 -----------RTCFYYNNVEARKDDPVFKQEVLDIEDLVKIGQKHKCCPYFLAKELKQN 223
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
A++V Y YLLDPK ++Q +VV+ DEAHN++ VC EA S+ +
Sbjct: 224 ADIVFMPYNYLLDPKTRKSQGIDLQ-NTVVLLDEAHNVEKVCEEAASLQIS--------- 273
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+TD E +++ +A +L N + + D E
Sbjct: 274 -------------STDIALCIDEVTAVMKDMAKDIDLENDFSPENNVQKDFTAED----- 315
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEK--EG---PVSFVASITAHAGIDQKTLRFCYER 376
L++L+ + L +++ ++ EG P F+ + + + ++
Sbjct: 316 ------LYILKTMFLELEKAVDSIELKNRTEGDTFPGGFIFELLEKIELTHGKEQIVVDK 369
Query: 377 LHSLMLTLEITDTDEFLHI-QTICDFATLVGT-YTRGFSII-------------IEPFDE 421
L ++ L T T F + F+ L+ T + G SI I+ ++
Sbjct: 370 LEKIISYLTTTSTSPFARKGNALQKFSDLLKTAFNSGTSITRHKEKVKRCYKVHIQTEEQ 429
Query: 422 RMPHIPD------------PVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRL 468
+ + D ++ C ++ + ++ +SV++TSGTLSP+ +
Sbjct: 430 KKNYKNDVWETKKTIKTDGKLISYWCFSPGFGMEQMVEQGIRSVILTSGTLSPLKPFISE 489
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSI 528
L V +T+ +C VL++G D P+++ ++ R+DP + G+ + I
Sbjct: 490 LGIPIAVQLENPHIVTKQQVCVGVLSQGPDNHPLNSSYNTRNDPKYIASLGRTVYNFSCI 549
Query: 529 VPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE--TQDVVETTLALDNYRKAC 586
+P G++ FF SY M + W + G+ +I + K +++E ++D + + Y+K
Sbjct: 550 IPHGLLIFFPSYPIMKKCRDEWQNMGLWTQIAERKPIYVEPNSKDGFVNVMN-EYYQKIR 608
Query: 587 D-CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK 645
D +GAVF +V RGKV+EG+DF GR V++ G+PF ++ + YL + +
Sbjct: 609 DPSNKGAVFMAVCRGKVSEGLDFANANGRAVLIIGLPFPPLKDPRVMLKQRYLEE-IRTA 667
Query: 646 EGDFLT------FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
E + LT +A R Q +GR+IR K+DYG +I D R+ + + +L W+ ++
Sbjct: 668 EKESLTGQEWYQLEASRAVNQAIGRIIRHKSDYGAVILCDCRFENPNFKKQLSAWLRPYI 727
Query: 700 RDAHLNLSTDMALHIAREFLR 720
+ + M REF R
Sbjct: 728 KKF---TNFGMITKELREFFR 745
>gi|354481991|ref|XP_003503184.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Cricetulus griseus]
Length = 1259
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 198/775 (25%), Positives = 335/775 (43%), Gaps = 129/775 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPE-----------NPVKLIYCTRTVHEMEKTLAELK 88
L S LS + K+IY +RT ++ + ++EL+
Sbjct: 65 DAVSSLKIAERVQGELFASRSLSSWNAADGDSIACYTDIPKIIYASRTHSQLTQVISELR 124
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHMQIHLCRKKVAS-------- 166
Query: 149 NPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
+C F+ N E+ + L + ++DL G + CPY+L+R+M Q A+++
Sbjct: 167 ----RSCHFYNNVEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNMKQQADIIFMP 222
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + T L INQ
Sbjct: 223 YNYLLDAKSRKAHNIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEAINQ 278
Query: 269 EI-ERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
+ E+ + G L+ L + P++ LS +I + +
Sbjct: 279 VLEEQARLAQQGELQ---------LEFSADTPSSGLSMEL-----------EDIAKLKMI 318
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
L L + ++ + V K G S++ + A A I +T E L ++ L
Sbjct: 319 LLRLEGAIDAIQLPGDDRGVTKPG--SYIFELFAEAQITFQTKGCILESLDQIIQHL-AG 375
Query: 388 DTDEFLH---IQTICDF--------------ATLVG-TYTRGFSIIIEP----------- 418
T F++ +Q + D +LVG + + + I P
Sbjct: 376 RTGVFINTVGLQKLMDIIQIVFSVDPPEGSPGSLVGLGVSHSYKVHIHPETSHRRAAQRS 435
Query: 419 --FDERMPHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+ VL C S +++ V +++++TSGTL+P+ + + V
Sbjct: 436 DAWSTTTSRKQGKVLSYWCFSPSHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPV 495
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+ R+ + V+ RG D + +S+ +D R + GK L + +VP G++
Sbjct: 496 CLENPHIIDRNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLV 555
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAV 593
FF SY M++ + W + K + K +F+E ++ + +D Y R A GA
Sbjct: 556 FFPSYPVMEKSLEFWRAQDLAKRVEVLKPLFVEPRNKGSFSEVIDAYYQRVASPGSSGAT 615
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-------RDTFQIKE 646
F +V RGK +EG+DF GR VI+ G+P+ + ++ ++++L R Q
Sbjct: 616 FLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDELRGRNRAGGQCLS 675
Query: 647 G-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
G ++ A R Q +GRVIR + DYG + D R++ D +++LP W+ +L+
Sbjct: 676 GQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADTKAQLPSWVRPYLK 730
>gi|322781255|gb|EFZ10173.1| hypothetical protein SINV_12884 [Solenopsis invicta]
Length = 884
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 193/764 (25%), Positives = 330/764 (43%), Gaps = 114/764 (14%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK- 63
+ D+ V FP+ YP Q YM ++ L H +LE PTGTGKT++LL S++L+K
Sbjct: 6 INDIVVNFPF-KPYPVQLEYMKKVIECLQNSQHGVLESPTGTGKTLSLLCSSLSWLLTKK 64
Query: 64 -----------------------------------PENP-------VKLIYCTRTVHEME 81
P+N K+IY +RT ++
Sbjct: 65 AQLQAQMIAGAIEKKDLGGHFFKHLTNGLEKAVGLPDNVQSFGWSMAKIIYASRTHSQLS 124
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK +T + A +L SR LC++ V N + C + S
Sbjct: 125 QAMHELK-----RTSYKHVATTVLG----SRDQLCIHPEVSKETNTFNKIHMCHSKVKS- 174
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
TC ++ N E V V ++DL G++ CPYFL + + Q
Sbjct: 175 -----------RTCFYYNNVEARKDDPVFKEEVLDIEDLVKLGQKHKCCPYFLTKELKQN 223
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
A++V Y YLLDPK ++Q +VV+ DEAHN++ VC EA S+ + +
Sbjct: 224 ADIVFMPYNYLLDPKTRRSQGIDLQN-TVVLLDEAHNVEKVCEEAASLQISSTDIAMCID 282
Query: 262 NLSRINQEIERFKATDAGRLRAEYNR----LVEGLALRGNLPNAWLS-NPALPSDILKEA 316
++ + Q++ + + +E N E L L L +L A+ S LK +
Sbjct: 283 EVTSVMQDMAKNSDQQSFDFLSENNVQKDFTAEDLCL---LKAMFLELEKAIDSIELKNS 339
Query: 317 VPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKT------- 369
GN +L + V+ G+ E +EK + + T+ + +K
Sbjct: 340 SEGNTFPGGFIFELLEK-VELTHGK-EQIVIEKLEKIILYLTTTSTSPFARKGNALQKFS 397
Query: 370 --LRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIP 427
LR + S+ E +HIQ + + + + ++M
Sbjct: 398 DLLRTVFNSGASIARHREKVKRCYKVHIQ--------IEEQKKNYKNDVWE-SKKMTKTD 448
Query: 428 DPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRD 486
++ C ++ + ++ +SVV+TSGTLSP+ + L V +T+
Sbjct: 449 GKLISYWCFSPGFGMEQMVEQGIRSVVLTSGTLSPLKSFISELGIPIAVQLENPHIVTKG 508
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+C +L++G D P+++ ++ R+DP + G+ + IVP G++ FF SY M +
Sbjct: 509 QVCVGILSQGPDNHPLNSSYNTRNDPKYIASLGRTVYNFSCIVPHGLLIFFPSYPIMKKC 568
Query: 547 IATWNDSGILKEIMQH---KLVFIETQDVVETTLALDNYRKACDCG-RGAVFFSVARGKV 602
W + G+ +I + K F+ + + Y+K D +GAVF +V RGKV
Sbjct: 569 RDEWQNMGLWTQIAEQPNSKEGFVNVMN--------EYYQKIRDPSCKGAVFMAVCRGKV 620
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALR 656
+EG+DF GR V++ G+PF ++ + YL + + E + LT +A R
Sbjct: 621 SEGLDFANANGRAVLIIGLPFPPLKDPRVMLKQRYLEE-IKTTEKESLTGQEWYQLEASR 679
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GR+IR K+DYG +I D R+ + + +L W+ +++
Sbjct: 680 AVNQAIGRIIRHKSDYGAVILCDCRFENPNFKKQLSTWLRPYIK 723
>gi|344254979|gb|EGW11083.1| Regulator of telomere elongation helicase 1 [Cricetulus griseus]
Length = 1225
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 198/775 (25%), Positives = 335/775 (43%), Gaps = 129/775 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPE-----------NPVKLIYCTRTVHEMEKTLAELK 88
L S LS + K+IY +RT ++ + ++EL+
Sbjct: 65 DAVSSLKIAERVQGELFASRSLSSWNAADGDSIACYTDIPKIIYASRTHSQLTQVISELR 124
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHMQIHLCRKKVAS-------- 166
Query: 149 NPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
+C F+ N E+ + L + ++DL G + CPY+L+R+M Q A+++
Sbjct: 167 ----RSCHFYNNVEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNMKQQADIIFMP 222
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + T L INQ
Sbjct: 223 YNYLLDAKSRKAHNIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEAINQ 278
Query: 269 EI-ERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
+ E+ + G L+ L + P++ LS +I + +
Sbjct: 279 VLEEQARLAQQGELQ---------LEFSADTPSSGLSMEL-----------EDIAKLKMI 318
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
L L + ++ + V K G S++ + A A I +T E L ++ L
Sbjct: 319 LLRLEGAIDAIQLPGDDRGVTKPG--SYIFELFAEAQITFQTKGCILESLDQIIQHL-AG 375
Query: 388 DTDEFLH---IQTICDF--------------ATLVG-TYTRGFSIIIEP----------- 418
T F++ +Q + D +LVG + + + I P
Sbjct: 376 RTGVFINTVGLQKLMDIIQIVFSVDPPEGSPGSLVGLGVSHSYKVHIHPETSHRRAAQRS 435
Query: 419 --FDERMPHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+ VL C S +++ V +++++TSGTL+P+ + + V
Sbjct: 436 DAWSTTTSRKQGKVLSYWCFSPSHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPV 495
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+ R+ + V+ RG D + +S+ +D R + GK L + +VP G++
Sbjct: 496 CLENPHIIDRNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLV 555
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAV 593
FF SY M++ + W + K + K +F+E ++ + +D Y R A GA
Sbjct: 556 FFPSYPVMEKSLEFWRAQDLAKRVEVLKPLFVEPRNKGSFSEVIDAYYQRVASPGSSGAT 615
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-------RDTFQIKE 646
F +V RGK +EG+DF GR VI+ G+P+ + ++ ++++L R Q
Sbjct: 616 FLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDELRGRNRAGGQCLS 675
Query: 647 G-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
G ++ A R Q +GRVIR + DYG + D R++ D +++LP W+ +L+
Sbjct: 676 GQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADTKAQLPSWVRPYLK 730
>gi|89887293|gb|ABD78306.1| regulator of telomere length splice variant isoform 1 [Bos taurus]
Length = 1082
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 192/782 (24%), Positives = 331/782 (42%), Gaps = 142/782 (18%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LKGVTVDFPF-QPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 55 --------------------LITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
+ S+ + PE V K+IY +RT ++ + ++E
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ +Y+ R L SR+ LC++ V E+ CR++ AS
Sbjct: 125 LRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQVHLCRRKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLD K ++ K +VV+FDEAHN++ +C EA S + + + R+
Sbjct: 223 MPYNYLLDAKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRV 281
Query: 267 NQEIERFKATDAGRLRAEY--NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+E R K L E+ + GL L P D+ K
Sbjct: 282 LEE--RTKVAQQAELHPEFSADSARSGLNLE-------------PEDLAK---------- 316
Query: 325 EHFLHVLRRLVQYLRG-----RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
L+ ++ L G L +N P S++ + A A I +T + L
Sbjct: 317 ------LKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQ 370
Query: 380 LMLTLE-----ITDTDEFLHIQTIC-----------DFATLVGTYTRGFSIII------- 416
L+ L T+T + I D +VG ++ + + I
Sbjct: 371 LIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVGLASQSYKVHIHLDAGHR 430
Query: 417 ------EPFDERMPHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLL 469
+ ++ P VL C +++ V +++++TSGTL+P+ + +
Sbjct: 431 RTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM 490
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
V + + I V+ +G D +S+ FD R + GK+L + +V
Sbjct: 491 QIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVV 550
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACD 587
P G++ FF SY M++ + W +++ K +F+E + + ++ + R A
Sbjct: 551 PHGLLVFFPSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAP 610
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GA+F +V RGK +EG+DF GR VI+ G+P+ + +L ++++L D + + G
Sbjct: 611 ESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFL-DEMKAQSG 669
Query: 648 ---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
D+ A R Q +GRVIR + DYG + D R++ D R++LP W+ H
Sbjct: 670 AGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPH 729
Query: 699 LR 700
++
Sbjct: 730 VK 731
>gi|89887299|gb|ABD78309.1| regulator of telomere length splice variant isoform 4 [Bos taurus]
Length = 1121
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 191/782 (24%), Positives = 332/782 (42%), Gaps = 142/782 (18%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LKGVTVDFPF-QPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 55 --------------------LITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
+ S+ + PE V K+IY +RT ++ + ++E
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ +Y+ R L SR+ LC++ V E+ CR++ AS
Sbjct: 125 LRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQVHLCRRKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLD K ++ K +VV+FDEAHN++ +C EA S + + + R+
Sbjct: 223 MPYNYLLDAKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRV 281
Query: 267 NQEIERFKATDAGRLRAEY--NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+E R K L E+ + GL L P D+ K
Sbjct: 282 LEE--RTKVAQQAELHPEFSADSARSGLNLE-------------PEDLAK---------- 316
Query: 325 EHFLHVLRRLVQYLRG-----RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
L+ ++ L G L +N P S++ + A A I +T + L
Sbjct: 317 ------LKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQ 370
Query: 380 LMLTLE-----ITDTDEFLHIQTIC-----------DFATLVGTYTRGFSIII------- 416
L+ L T+T + I D +VG ++ + + I
Sbjct: 371 LIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVGLASQSYKVHIHLDAGHR 430
Query: 417 ------EPFDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLL 469
+ ++ P VL C +++ + + +++++TSGTL+P+ + +
Sbjct: 431 RTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM 490
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
V + + I V+ +G D +S+ FD R + GK+L + +V
Sbjct: 491 QIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVV 550
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACD 587
P G++ FF SY M++ + W +++ K +F+E + + ++ + R A
Sbjct: 551 PHGLLVFFPSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAP 610
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GA+F +V RGK +EG+DF GR VI+ G+P+ + +L ++++L D + + G
Sbjct: 611 ESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFL-DEMKAQSG 669
Query: 648 ---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
D+ A R Q +GRVIR + DYG + D R++ D R++LP W+ H
Sbjct: 670 AGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPH 729
Query: 699 LR 700
++
Sbjct: 730 VK 731
>gi|229891626|sp|A4K436.1|RTEL1_BOVIN RecName: Full=Regulator of telomere elongation helicase 1
gi|89887297|gb|ABD78308.1| regulator of telomere length splice variant isoform 3 [Bos taurus]
Length = 1216
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 191/782 (24%), Positives = 332/782 (42%), Gaps = 142/782 (18%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LKGVTVDFPF-QPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 55 --------------------LITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
+ S+ + PE V K+IY +RT ++ + ++E
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ +Y+ R L SR+ LC++ V E+ CR++ AS
Sbjct: 125 LRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQVHLCRRKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLD K ++ K +VV+FDEAHN++ +C EA S + + + R+
Sbjct: 223 MPYNYLLDAKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRV 281
Query: 267 NQEIERFKATDAGRLRAEY--NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+E R K L E+ + GL L P D+ K
Sbjct: 282 LEE--RTKVAQQAELHPEFSADSARSGLNLE-------------PEDLAK---------- 316
Query: 325 EHFLHVLRRLVQYLRG-----RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
L+ ++ L G L +N P S++ + A A I +T + L
Sbjct: 317 ------LKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQ 370
Query: 380 LMLTLE-----ITDTDEFLHIQTIC-----------DFATLVGTYTRGFSIII------- 416
L+ L T+T + I D +VG ++ + + I
Sbjct: 371 LIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVGLASQSYKVHIHLDAGHR 430
Query: 417 ------EPFDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLL 469
+ ++ P VL C +++ + + +++++TSGTL+P+ + +
Sbjct: 431 RTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM 490
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
V + + I V+ +G D +S+ FD R + GK+L + +V
Sbjct: 491 QIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVV 550
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACD 587
P G++ FF SY M++ + W +++ K +F+E + + ++ + R A
Sbjct: 551 PHGLLVFFPSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAP 610
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GA+F +V RGK +EG+DF GR VI+ G+P+ + +L ++++L D + + G
Sbjct: 611 ESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFL-DEMKAQSG 669
Query: 648 ---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
D+ A R Q +GRVIR + DYG + D R++ D R++LP W+ H
Sbjct: 670 AGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPH 729
Query: 699 LR 700
++
Sbjct: 730 VK 731
>gi|148225626|ref|NP_001091044.1| regulator of telomere elongation helicase 1 [Bos taurus]
gi|84105070|gb|ABC54575.1| regulator of telomere length helicase 1 [Bos taurus]
gi|84105072|gb|ABC54576.1| regulator of telomere length helicase 1 [Bos taurus]
Length = 1266
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 192/778 (24%), Positives = 330/778 (42%), Gaps = 134/778 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LKGVTVDFPF-QPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 55 --------------------LITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
+ S+ + PE V K+IY +RT ++ + ++E
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ +Y+ R L SR+ LC++ V E+ CR++ AS
Sbjct: 125 LRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQVHLCRRKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLD K ++ K +VV+FDEAHN++ +C EA S + + + R+
Sbjct: 223 MPYNYLLDAKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRV 281
Query: 267 NQEIERFKATDAGRLRAEY--NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+E R K L E+ + GL L P D+ K
Sbjct: 282 LEE--RTKVAQQAELHPEFSADSARSGLNLE-------------PEDLAK---------- 316
Query: 325 EHFLHVLRRLVQYLRG-RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT 383
+L RL + L +N P S++ + A A I +T + L L+
Sbjct: 317 --LKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQLIQH 374
Query: 384 LE-----ITDTDEFLHIQTIC-----------DFATLVGTYTRGFSIII----------- 416
L T+T + I D +VG ++ + + I
Sbjct: 375 LAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVGLASQSYKVHIHLDAGHRRTAQ 434
Query: 417 --EPFDERMPHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
+ ++ P VL C +++ V +++++TSGTL+P+ + +
Sbjct: 435 RSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPF 494
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
V + + I V+ +G D +S+ FD R + GK+L + +VP G+
Sbjct: 495 PVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGL 554
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRG 591
+ FF SY M++ + W +++ K +F+E + + ++ + R A G
Sbjct: 555 LVFFPSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAPESSG 614
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---- 647
A+F +V RGK +EG+DF GR VI+ G+P+ + +L ++++L D + + G
Sbjct: 615 AIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFL-DEMKAQSGAGGQ 673
Query: 648 -----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
D+ A R Q +GRVIR + DYG + D R++ D R++LP W+ H++
Sbjct: 674 FLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPHVK 731
>gi|89887295|gb|ABD78307.1| regulator of telomere length splice variant isoform 2 [Bos taurus]
Length = 1237
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 192/782 (24%), Positives = 331/782 (42%), Gaps = 142/782 (18%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LKGVTVDFPF-QPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 55 --------------------LITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
+ S+ + PE V K+IY +RT ++ + ++E
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ +Y+ R L SR+ LC++ V E+ CR++ AS
Sbjct: 125 LRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQVHLCRRKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLD K ++ K +VV+FDEAHN++ +C EA S + + + R+
Sbjct: 223 MPYNYLLDAKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRV 281
Query: 267 NQEIERFKATDAGRLRAEY--NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+E R K L E+ + GL L P D+ K
Sbjct: 282 LEE--RTKVAQQAELHPEFSADSARSGLNLE-------------PEDLAK---------- 316
Query: 325 EHFLHVLRRLVQYLRG-----RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
L+ ++ L G L +N P S++ + A A I +T + L
Sbjct: 317 ------LKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQ 370
Query: 380 LMLTLE-----ITDTDEFLHIQTIC-----------DFATLVGTYTRGFSIII------- 416
L+ L T+T + I D +VG ++ + + I
Sbjct: 371 LIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVGLASQSYKVHIHLDAGHR 430
Query: 417 ------EPFDERMPHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLL 469
+ ++ P VL C +++ V +++++TSGTL+P+ + +
Sbjct: 431 RTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM 490
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
V + + I V+ +G D +S+ FD R + GK+L + +V
Sbjct: 491 QIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVV 550
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACD 587
P G++ FF SY M++ + W +++ K +F+E + + ++ + R A
Sbjct: 551 PHGLLVFFPSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAP 610
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
GA+F +V RGK +EG+DF GR VI+ G+P+ + +L ++++L D + + G
Sbjct: 611 ESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFL-DEMKAQSG 669
Query: 648 ---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
D+ A R Q +GRVIR + DYG + D R++ D R++LP W+ H
Sbjct: 670 AGGQFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPH 729
Query: 699 LR 700
++
Sbjct: 730 VK 731
>gi|355686448|gb|AER98061.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mustela putorius furo]
Length = 182
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 128/182 (70%)
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
LIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++ V+
Sbjct: 1 LIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVMPLRFGKD 60
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW 189
VD C TAS+VRA ++P++ C F+E ++ LP G+Y L DL+A G++QGW
Sbjct: 61 VDGKCHSLTASYVRAQYQQDPSLPHCRFYEEFDVHGRQVPLPAGIYNLDDLKALGRRQGW 120
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CPYFLAR+ + ANVVVYSY YLLDPK+A ++SKE+ +++VVVFDEAHNIDNVCI+++SV
Sbjct: 121 CPYFLARYSILHANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNIDNVCIDSMSV 180
Query: 250 SV 251
++
Sbjct: 181 NL 182
>gi|380013392|ref|XP_003690744.1| PREDICTED: regulator of telomere elongation helicase 1 homolog,
partial [Apis florea]
Length = 970
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 182/782 (23%), Positives = 331/782 (42%), Gaps = 141/782 (18%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
+ ++ V FP+ Y Q YM ++ + L + +LE PTGTGKT++LL
Sbjct: 6 INNIIVNFPF-KPYSIQEEYMAKVIQCLQNSKNGVLESPTGTGKTLSLLCSSLSWLLSKK 64
Query: 54 -SLITSYVLSKPENP-------------------------------VKLIYCTRTVHEME 81
L +++K E P K+IY +RT ++
Sbjct: 65 AQLQAQSLMNKIEEPNFSGHFFKQLNNGLKKSTGDTEPTIVFNWNAPKIIYASRTHSQLS 124
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK +H+G A L SR LC++ V N + C + S
Sbjct: 125 QAMQELK---RTSYKHVGTAV------LGSRDQLCIHPEVSKETNSSNKIYMCHSKVKS- 174
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
TC ++ N E + ++DL G++ CPYFL+R + Q
Sbjct: 175 -----------RTCFYYNNVESRKDDPFFKQEILDIEDLVKAGQKFKCCPYFLSRELKQN 223
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
A+++ Y Y+LD K I ++Q ++++FDEAHNI+ +C E S+ + +
Sbjct: 224 ADIIFMPYNYILDTKSRKIQGIDIQ-NNIILFDEAHNIEKICEETASLQISSTDIAMCID 282
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNI 321
++ + +++ A + + N L+E N N A ILK A+ +
Sbjct: 283 EITVVMEDM-------AKDIEQQNNFLME------NSENVQKDFTADDLCILK-AMFLEL 328
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEG---PVSFVASITAHAGIDQKTLRFCYERLH 378
+A + +++R EG P ++ + A + + E+L
Sbjct: 329 EKAIDDISIVKR---------------DEGDTFPGGYIFELLGKAQLTHGREQLVIEKLE 373
Query: 379 SLMLTLEITDTDEFLHI-QTICDFATLVGT-------------YTRGFSIIIEPFDER-- 422
++ L T T F + F+ L+ T + + + I+ +++
Sbjct: 374 KIVFYLTTTSTSPFTRKGNALQKFSDLLKTAFSSDNSLLSKEKIKQYYKVYIQLEEQKKS 433
Query: 423 -----------MPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLN 470
+P ++ C +++ + D+ +++++TSGTLSP+ + L
Sbjct: 434 KQNDVWEKKKILPKNEGKIINYWCFSPGFSMQQLKDQGTRAIILTSGTLSPLKPFISELG 493
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
V + D IC +L+RG D +++ F+ R+DP + G+ + +VP
Sbjct: 494 IPIEVQLENSHIVKEDQICVGILSRGPDGYSLNSSFNTRNDPKYIGSLGQTIFNFSCLVP 553
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC---D 587
G++ FF SY M + W ++G+ +I K +++E Q ++ Y +
Sbjct: 554 YGLLVFFPSYPIMKKCKEEWQNTGLWTKIADRKPIYVEPQYKDGFINVMNEYYEKIRNPS 613
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
C +GA+F +V RGKV+EG+DF GR V++ G+PF ++ + YL +IK+
Sbjct: 614 C-KGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPRVILKQRYLE---EIKKQ 669
Query: 648 D--------FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
D + +A R Q +GR+IR K DYG +I D R+ + + L W+ H+
Sbjct: 670 DKEVLSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDHRFDNPNFKKHLSAWLRPHI 729
Query: 700 RD 701
++
Sbjct: 730 KN 731
>gi|449486421|ref|XP_002193824.2| PREDICTED: regulator of telomere elongation helicase 1 [Taeniopygia
guttata]
Length = 1107
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 190/772 (24%), Positives = 331/772 (42%), Gaps = 130/772 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L +TV FP+ YP Q +YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGITVDFPF-QPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHFK 64
Query: 54 SLITSYVLSK--------PENPV--------------------KLIYCTRTVHEMEKTLA 85
I++ +++ P+ PV K+IY +RT ++ + +
Sbjct: 65 DTISARKIAQRMNGVELFPDRPVSSWGTAATDGDVPTYYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
ELK N R KI +G SR+ LC+N V E+ CR + +
Sbjct: 125 ELK---NTVYR-----PKICVLG--SREQLCINPEVKRQESNHMQIYMCRMKVMA----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
C F+ N E+ ++ L + ++DL G + CPY+L+R + Q A+++
Sbjct: 170 -------RACHFYNNVEEKSTEKELIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+ DEAHN++ +C E+ S + L A ++
Sbjct: 223 FMPYNYLLDSKSRKAHNLDL-KGTVVILDEAHNVEKLCEESSSFDLTPYDLASAMEAINV 281
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAE 325
+ +E + K + AE+ N L++ L ++ +I + +
Sbjct: 282 VLEE--QAKVVQQNEINAEF--------------NMELASSGLNMEL------EDIAKIK 319
Query: 326 HFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE 385
L L + + V KEG S++ + A A I +T E L ++ L
Sbjct: 320 KILLQLESAIDAVELPANGNGVTKEG--SYIFDLFAEAQITLQTKSSLLESLEQILQFLS 377
Query: 386 ----ITDTDEFLH-----IQTICDFATLVGTYTRGF------------SIIIEPFDERMP 424
I LH IQT+ G T GF I ++ +++
Sbjct: 378 GRTGIFVNTSGLHKVSDIIQTVFSVDPPEGV-TTGFLPRQAISKYYKVHIHVDNSNQKKK 436
Query: 425 HIPD-----------PVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFH 472
D L C ++ + + +++++TSGTLSP+ + +
Sbjct: 437 QRTDLWNSSSSKRQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIP 496
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
V + + + ++ +G D +++ ++ R + GK + +V +VP G
Sbjct: 497 FPVCLENPHVIDKHQLWVGIIPKGPDGTVLTSTYERRFSEDYLSSLGKTIGNLVRVVPHG 556
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-- 590
++ FF SY MD+ + W + K I + K +F+E ++ + +D Y C +
Sbjct: 557 MLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPRNKGSFSEVIDAYYDKVTCPKSN 616
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG--- 647
GA F +V RGK +EG+DF GR VI+ G+PF + ++ ++++L + + G
Sbjct: 617 GAAFLAVCRGKASEGLDFADINGRGVIITGLPFPPRMEPRVILKMQFLDEMRRSGAGAQY 676
Query: 648 ----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
++ + A R Q +GRVIR + DYG + D R++ D R KLP W+
Sbjct: 677 LSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFLCDHRFTTCDVRGKLPSWV 728
>gi|55274867|gb|AAV49237.1| TFIIH helicase [Caenorhabditis remanei]
Length = 171
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 111/145 (76%)
Query: 589 GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD 648
GRGAV FSVARGKV+EGIDF H GR VIM G+P+ YT S++L ARLEYLRDTF I+E D
Sbjct: 1 GRGAVLFSVARGKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEYLRDTFGIREND 60
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST 708
FLTFDA+R AQC+GR +RSK DYG+M+FADKR+SR+DKR KLP W+ +L A NLS
Sbjct: 61 FLTFDAMRHTAQCMGRALRSKTDYGLMVFADKRFSRNDKRGKLPRWMQEYLEPASTNLSI 120
Query: 709 DMALHIAREFLRKMAQPYDKAGSIG 733
D A +AR +L MAQP+ K +G
Sbjct: 121 DEAAQVARRWLTLMAQPFQKEHQLG 145
>gi|324503421|gb|ADY41490.1| Regulator of telomere elongation helicase 1 [Ascaris suum]
Length = 993
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 192/788 (24%), Positives = 333/788 (42%), Gaps = 147/788 (18%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL--------- 53
++ ++V FPY+ Y Q YM ++ L + LE PTGTGKT+ LL
Sbjct: 4 LQIGKISVEFPYEP-YDCQLLYMEKVIETLKRSFNAALESPTGTGKTLCLLCATIAFTKE 62
Query: 54 --SLITSYVLSKPENPV------KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKIL 105
S I+ + P+ K+IY +RT ++ + + EL T+
Sbjct: 63 MKSRISVDATANPQGTTPGSLYPKIIYASRTHSQLAQVVRELNKTVYKDTK--------- 113
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
L+SR LC+N V+ +N + CR + C ++ Y++ +
Sbjct: 114 TATLASRDFLCINETVMKEQNSTTKALMCRNLVKN------------RKCRYYNEYDRQS 161
Query: 166 SAAV-----LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGI 220
++ V ++D+ GK+ CP++ R +V A++++ Y Y++DP++ +
Sbjct: 162 KDSLEIIYNCNGMVPDIEDIVNIGKKHSVCPFYRTRSLVDEADLLLMPYNYVIDPRLRRM 221
Query: 221 ISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI-----NQEIE---R 272
+ K ++V+FDEAHN++ +C EA+SVS + L G R + N E E +
Sbjct: 222 HDVGL-KGNIVIFDEAHNLEAICEEAVSVSFSSKELSGCIRETKTVLEMIMNDEEEVRTK 280
Query: 273 FKATDA-----------GRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNI 321
TDA + E N + LA+ L + + D LK+ G
Sbjct: 281 MDNTDAPFGASDDVVDRSEVHLEKNDVARLLAM--------LQSLEVVVDGLKKNGQGGR 332
Query: 322 R--RAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQK---TLRFCYER 376
R E +H +++V+ L+ AGI + L +R
Sbjct: 333 RLNMVEGKVHAGQKMVELLK----------------------TAGIRRDFRDELSLLVDR 370
Query: 377 LHSLMLTLEITD-----TDEFLHIQTICDFATLVGTYTRGFSIIIEPF------------ 419
+ ++ +D D H+Q F ++V Y G+ + PF
Sbjct: 371 IGQYLVQKGSSDQGTVFADTGAHLQHFASFVSVV--YADGYDPLA-PFHEPKNSKAKRFN 427
Query: 420 DERMPHIPDPVLQLS-------------CHDASLAVKPVFDR-FQSVVITSGTLSPIDLY 465
D+R+ ++ QL C +A++ + R +S+++TSGTLSP+ +
Sbjct: 428 DQRLTNLMAEKFQLYVTEEGTLVTLNYWCFSPVVAMRYMHARGVRSIIVTSGTLSPLKAF 487
Query: 466 PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
+L ++ + D + + + L + F RS G ++ +
Sbjct: 488 IEVLGVDMRITLENDHVASSDQVIGACVYGDDNGLAICGSFKNRSSDAYLLGVGSVIRRI 547
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWN-----DSGILKEIMQHKLVFIETQDVVETTLALD 580
SIVP+GI+ FF SY M+ I W S E+ Q K +F+E + VE L L
Sbjct: 548 CSIVPEGILVFFSSYVLMNTCIRKWKAHNVTGSSPWSEMAQSKKLFVEPKSKVELKLILA 607
Query: 581 NYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-- 638
+R++ GA F+V R KV+EGIDF R V++ GVPF + + +YL
Sbjct: 608 QFRESVHQDNGAALFAVCRAKVSEGIDFSDSESRAVVVVGVPFAPISDPRIQLKKQYLCE 667
Query: 639 -----RDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
+++ + G ++ DALR Q +GRV+R K D+G ++ D R+S + +
Sbjct: 668 RRVNDKNSTNMMSGEEWYQVDALRAVNQAIGRVLRHKDDFGAVVLVDSRFSAMGPK-RFS 726
Query: 693 GWILSHLR 700
W+ + L+
Sbjct: 727 SWMRNSLK 734
>gi|156102350|ref|XP_001616868.1| DNA repair helicase [Plasmodium vivax Sal-1]
gi|148805742|gb|EDL47141.1| DNA repair helicase, putative [Plasmodium vivax]
Length = 1103
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 200/815 (24%), Positives = 346/815 (42%), Gaps = 157/815 (19%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+ + DV VYFPY+ +Y QY+YML + AL K + +LE PTGTGKT+ LL SY
Sbjct: 21 YTINDVEVYFPYE-LYDCQYNYMLSVLNALKRKENAILESPTGTGKTLCLLCASISYLVD 79
Query: 60 VLSK------------------------------------PENPVKLIYCTRTVHEMEKT 83
VL K P + K+IY +RT ++++
Sbjct: 80 VLEKKGAFSENINITENKKNISFDFKENENSKGSPAKVAPPSDFPKIIYASRTHSQLKQV 139
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
+ ELK ++ + K+L L SR LCV++ + ++ C++ +
Sbjct: 140 IKELKNVYFIKN---NEKYKLLTTILGSRDQLCVHN-INYNYKGTMLNNMCKRTRKNG-- 193
Query: 144 ALAAENPNIETCEFFENYE---KAASAAVLPPGVYTLQDL---RAFGKQQGWCPYFLARH 197
C + + K P V TL ++ + G+ +CP++ R
Sbjct: 194 ----------ECMYHNGLKYLYKLKHLFTTPMDVETLSEIGKGNSVGQNIHFCPFYATRE 243
Query: 198 MVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL- 256
+ +V++ Y YL + I+ ++ S+++ DE HNI+NV EA+S +R L
Sbjct: 244 IQNECHVILLPYNYLFEESTRKILKLNLE-NSIIIIDEGHNIENVAEEAVSFKIRDSELN 302
Query: 257 ---EGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN--AWLSNPALPS- 310
EG L+ ++ K D + + + E L ++ AWL N L
Sbjct: 303 LFLEGIKATLTVLD------KVNDVDKETKDKINVDELFILNRSITALIAWLDNERLEKN 356
Query: 311 ------------------DILKEAVPGNIRRA--EHFLHVLRRLVQYLR--------GRL 342
DI E NI + E+F +L +V+ L ++
Sbjct: 357 EKNKIKEKHKTYEGKQIFDIF-EKNNINITKDNFENFHTLLSSMVELLNRYINDFKITQM 415
Query: 343 ETENVEKEGPVSFVASITAHAGI-DQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD- 400
+ +N+ + +S + ++ I +R C E L + E E + + D
Sbjct: 416 DVKNINR--YISTIDNVRKSFSILFSDIVRNCIEYFQ-LYINEEKVSYSECGDVNKVYDN 472
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF-DRFQSVVITSGTL 459
T+ I+ + ++ M + L C A+ ++ + ++ SV++TSGTL
Sbjct: 473 MKKFAKNKTK---IVYDKYNYTMS----KNISLLCFSATASLCGIIKEKVNSVIVTSGTL 525
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLTRGSDQLPVSTKFDMRSDPG 513
SPI+ + + L+ + SFK L D + +T ++Q+ +ST ++ RS+
Sbjct: 526 SPIEPFSKQLSGNYF---SFKHILENDHVIKSHQLFVGCMTHYNNQILLST-YENRSNDN 581
Query: 514 VARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV 573
+ G + +++ +P G++ FF SYS M E + W I ++I +K +F+E
Sbjct: 582 YVKALGNCIFDIIICIPYGVLIFFSSYSSMTETVNAWKKFKIFEKINSYKTIFVEPNKAS 641
Query: 574 ETTLALDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
E LD Y R GA+ V RGK++EGIDF R VI+ G+P+ ++
Sbjct: 642 ELKDILDQYENIIKKKRKGAILMGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKII 701
Query: 633 ARLEYLRDTFQ--------------------------IKEGD-FLTFDALRQAAQCVGRV 665
+ E+L D F+ I +G+ + +A+R Q +GRV
Sbjct: 702 FKKEFL-DNFKYENAASDMMGGANGGGAQSNSTTLSNISKGNKWYNEEAMRSINQSIGRV 760
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
IR K DYG + F D R+S + + ++ W+ +H R
Sbjct: 761 IRHKNDYGSIFFLDSRFSNNQRIKEISKWVRTHFR 795
>gi|440889948|gb|ELR44730.1| Regulator of telomere elongation helicase 1 [Bos grunniens mutus]
Length = 1264
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 191/770 (24%), Positives = 326/770 (42%), Gaps = 120/770 (15%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LKGVTVDFPF-QPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 60 --VLSK--PENPVKLIYCTRTVHEMEKTLAE------------------LKLLHNYQTRH 97
V ++ E ++ RT+ + E L +R
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPEACPHFSALPPHLPWTLTQAGLSRR 124
Query: 98 LGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEF 157
P + + L SR+ LC++ V E+ CR++ AS +C F
Sbjct: 125 ESPCQPRVCV-LGSREQLCIHPEVKKQESNHMQVHLCRRKVAS------------RSCHF 171
Query: 158 FENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
+ N E+ + L + ++DL G + CPY+L+R++ Q A+++ Y YLLD K
Sbjct: 172 YNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKS 231
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE-RFKAT 276
++ K +VV+FDEAHN++ +C EA S + T L I+Q +E R K
Sbjct: 232 RRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDL---TPHDVASGLDVIDQVLEERTKVA 287
Query: 277 DAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQ 336
L E++ G L NL P D+ K L+ ++
Sbjct: 288 QQAELHPEFSADSAGSGL--NLE---------PEDLAK----------------LKMILL 320
Query: 337 YLRG-----RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE-----I 386
L G L +N P S++ + A A I +T + L L+ L
Sbjct: 321 RLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQLIQHLAGRAGLF 380
Query: 387 TDTDEFLHIQTIC-----------DFATLVGTYTRGFSIII-------------EPFDER 422
T+T + I D +VG ++ + + I + ++
Sbjct: 381 TNTAGLQKLVDIIQIVFSVDSAEGDPGPMVGLASQSYKVHIHLDAGHRRTAQRSDVWNTT 440
Query: 423 MPHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKM 481
P VL C +++ V +++++TSGTL+P+ + + V
Sbjct: 441 AARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPH 500
Query: 482 SLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYS 541
+ + I V+ +G D +S+ FD R + GK+L + +VP G++ FF SY
Sbjct: 501 VINQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFFPSYP 560
Query: 542 YMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVAR 599
M++ + W +++ K +F+E + + ++ + R A GA+F +V R
Sbjct: 561 VMEKSLEFWRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCR 620
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFL 650
GK +EG+DF GR VI+ G+P+ + +L ++++L D + + G D+
Sbjct: 621 GKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFL-DEMKAQSGAGGQFLSGHDWY 679
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q +GRVIR + DYG + D R++ D R++LP W+ H++
Sbjct: 680 RQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPHVK 729
>gi|340715420|ref|XP_003396211.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Bombus terrestris]
Length = 996
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 184/778 (23%), Positives = 326/778 (41%), Gaps = 133/778 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKT--------------- 49
+ +V V FP+ Y Q YM+++ L + +LE PTGTGKT
Sbjct: 6 INNVIVNFPF-KPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKTLSLLCSSLSWLLTKK 64
Query: 50 --IALLSLITSYVLSKPE----------------------------NPVKLIYCTRTVHE 79
+ SLI + + KP+ P K+IY +RT +
Sbjct: 65 AQLQAQSLIGA--IEKPDFGGHFFKQLSNGLKEGTGDSEPTSNLGWAPPKIIYASRTHSQ 122
Query: 80 MEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTA 139
+ + + ELK +H+ A L SR LC++ V + + C +
Sbjct: 123 LSQAMQELK---RTSYKHVSTAV------LGSRDQLCIHPEVSKETSSSNKIYMCHSKIK 173
Query: 140 SWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMV 199
S TC ++ N E + V ++DL G++ CPYFL+R +
Sbjct: 174 S------------RTCFYYNNVESRKDDPLFKQEVLDIEDLVKVGQKFKCCPYFLSRELK 221
Query: 200 QFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGA 259
Q A++ Y YLLD K ++Q ++++ DEAHNI+ C EA S+ +
Sbjct: 222 QNADITFMPYNYLLDSKSRKTQGIDIQ-NNIILLDEAHNIEKTCEEAASLQI-------C 273
Query: 260 TRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPG 319
+ +++ EI A + E + +E GN+ + ++ ILK A+
Sbjct: 274 STDIAMCIDEITAVMEDMASNIEQENDFSMEN---SGNIVKDFTADDLC---ILK-AMFL 326
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
+ +A + +L+R N P ++ + A + + E+L
Sbjct: 327 ELEKAIDAIEILKR------------NEGDTFPGGYIFELLGKAQLTHGREQLVIEKLEK 374
Query: 380 LMLTLEITDTDEFLHI-QTICDFATLVGT-YTRG------------FSIIIEPFDER--- 422
+ L T T F + F+ L+ T ++ G + + I+ +++
Sbjct: 375 IAFYLTTTSTSPFTRKGHALQKFSDLLKTVFSSGDSPRYREKIKQCYKVYIQLEEQKKXK 434
Query: 423 ----------MPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNF 471
+ V+ C +++ + D+ +S+++TSGTLSP+ + L
Sbjct: 435 QNEVWETKKILKKNEGKVISYWCFSPGFSMQQLMDQGVRSIILTSGTLSPLKPFISELGI 494
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
+ + D IC VL++G D +++ F+ R+DP + G+ ++ I+P
Sbjct: 495 PIELQLENPHIVKGDQICVGVLSQGPDGYSLNSSFNTRNDPKYIASLGRTVLNFSCIIPY 554
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR---KACDC 588
G++ FF SY M + W +G+ +I K +++E Q ++ Y K C
Sbjct: 555 GLLVFFPSYPIMKKCKEEWQTTGLWTKIADRKPIYVEPQYRDGFINVMNEYYEKIKDPSC 614
Query: 589 GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD-TFQIKEG 647
+GA+F +V RGKV+EG+DF GR V++ G+PF ++ + YL + Q KE
Sbjct: 615 -KGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPRVILKQRYLEEMKKQNKEA 673
Query: 648 ----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
+ +A R Q +GR+IR K DYG +I D R+ + + L W+ H+++
Sbjct: 674 LSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDCRFDNPNFKKHLSAWLRPHIKN 731
>gi|389585879|dbj|GAB68609.1| DNA repair helicase, partial [Plasmodium cynomolgi strain B]
Length = 1101
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 199/816 (24%), Positives = 347/816 (42%), Gaps = 159/816 (19%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL- 61
+ + DV VYFPY+ +Y QY+YML + AL K + +LE PTGTGKT+ LL SY++
Sbjct: 21 YTINDVEVYFPYE-LYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVD 79
Query: 62 --------------------------------------SKPENPVKLIYCTRTVHEMEKT 83
+ P + K+IY +RT ++++
Sbjct: 80 VMEKKGAFSENINITENKKNISFDFKENENSKGSPAKVAPPSDFPKIIYASRTHSQLKQV 139
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
+ ELK ++ + K+L L SR LCV++ + ++ C++ +
Sbjct: 140 IKELKNVYFIKN---NEKYKLLTTILGSRDQLCVHN-INYNYKGTMLNNMCKRTRKNG-- 193
Query: 144 ALAAENPNIETCEFFENYE---KAASAAVLPPGVYTLQDL---RAFGKQQGWCPYFLARH 197
C + + K P V TL ++ + G+ +CP++ R
Sbjct: 194 ----------ECMYHNGLKYLYKLKHLFTTPMDVETLSEIGKGNSVGQNIHFCPFYATRE 243
Query: 198 MVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL- 256
+ +V++ Y YL + I+ ++ S+++ DE HNI+ V EA+S +R L
Sbjct: 244 IQNECHVILLPYNYLFEESTRKILKLNLE-NSIIIIDEGHNIETVAEEAVSFKIRDSELN 302
Query: 257 ---EGATRNLSRINQEIERFKAT-DAGRLRAEY--NRLVEGLALRGNLPNAWLSNPALPS 310
EG L+ +++ + K T D + + NR + L +WL N L
Sbjct: 303 LFLEGIKATLTVLDKVNDVDKETKDKVNVDQLFILNRSITALI-------SWLDNERLEK 355
Query: 311 -------------------DILKEAVPGNIRRA--EHFLHVLRRLVQYLR--------GR 341
DI E NI + E+F +L +V+ L +
Sbjct: 356 NEKNKVKEKHKTYEGKQIFDIF-EKNNINITKDNFENFHTLLSSMVELLNRYINDFKISQ 414
Query: 342 LETENVEKEGPVSFVASITAHAGI-DQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
++ +N+ K +S + +I I +R C E L + E E + + D
Sbjct: 415 MDVKNITK--YISTIDNIRKSFSILFSDIVRNCIEYFQ-LYINEEKVAYSECGDVNKVYD 471
Query: 401 -FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF-DRFQSVVITSGT 458
T+ I+ + ++ M + L C A+ ++ + ++ SV++TSGT
Sbjct: 472 NMKKFAKNKTK---IVYDKYNYTMS----KNISLLCFSATASLCGIIKEKVNSVIVTSGT 524
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLTRGSDQLPVSTKFDMRSDP 512
LSPI+ + + L+ + SFK L D + +T ++Q+ +ST ++ RS+
Sbjct: 525 LSPIEPFSKQLSGNYF---SFKHILENDHVIKSHQLFVGCMTHYNNQILLST-YENRSND 580
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
+ G + +++ +P G++ FF SYS M E + W I ++I +K +F+E
Sbjct: 581 NYMKALGNCIFDLIICIPYGVLIFFSSYSSMTETVNAWKKFKIFEKINSYKTIFVEPNKA 640
Query: 573 VETTLALDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
E LD Y R GA+ V RGK++EGIDF R VI+ G+P+ +
Sbjct: 641 AELKDILDQYENIIKKKRKGAILMGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKI 700
Query: 632 LARLEYLRDTFQ--------------------------IKEGD-FLTFDALRQAAQCVGR 664
+ + E+L D F+ I +G+ + +A+R Q +GR
Sbjct: 701 IFKKEFL-DNFKYESSGNDMIGGANGGGVQSNNTTLSNISKGNKWYNEEAMRSINQSIGR 759
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
VIR K DYG + F D R+S + + ++ W+ +H R
Sbjct: 760 VIRHKNDYGSIFFLDSRFSNNQRIKEISKWVRTHFR 795
>gi|308812532|ref|XP_003083573.1| helicase-related (ISS) [Ostreococcus tauri]
gi|116055454|emb|CAL58122.1| helicase-related (ISS) [Ostreococcus tauri]
Length = 1048
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 207/759 (27%), Positives = 330/759 (43%), Gaps = 114/759 (15%)
Query: 9 TVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--------- 59
TV FPYD Y Q ++ A+ K LLE PTGTGKT+ LLS +Y
Sbjct: 19 TVSFPYD-AYDAQIVFIERALEAMCRKQSALLESPTGTGKTLCLLSAALAYARNEGRAKK 77
Query: 60 -----------------------VLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR 96
V + E ++Y TRT ++ + L ELK+L + TR
Sbjct: 78 RRARAREKASTSETVTEEFVDAEVRRERERAPTIVYATRTHSQVRQVLGELKVL-DSNTR 136
Query: 97 HLGPAAKILAIGLSSRKNLCVNSRVLA-----AENRDSVDAACRKRTASWVRALAAENPN 151
A L+SRK+ C V A NR S A RK A V ++
Sbjct: 137 ---------ATTLASRKHACAREDVRALVGDAQNNRCSKLVAERKCGAKNVLDMSLNRKG 187
Query: 152 I-ETCEFFENYEKAASAAVLPPGVYTLQDLR-AFGKQQGWCPYFLARHMVQFANVVVYSY 209
I E + FE GV ++DL A K +G CP++L+R A ++ Y
Sbjct: 188 IGEKFDVFEG------------GVRDIEDLVIAAQKSRGPCPFYLSRTKCADAEIIFMPY 235
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL-SRINQ 268
YLL+ V + + +++VV+ DEAHN+++ +++S S+ L A + S
Sbjct: 236 NYLLNDTVRRGLDI-VWEDAVVIVDEAHNLESSAADSMSYSLTAAKLAKAIQETNSAWET 294
Query: 269 EIERFKATDAGRLRAEYNRLVE-GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
++ + G LR + L + G+ G +A+ SN D+L+ + + + E
Sbjct: 295 KLTVDDNDEEGVLRDDQKELFKRGM---GEEASAFGSN-----DVLE--LGRTLLQLEEV 344
Query: 328 LHVLRRLVQYLRGRLET--ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM---- 381
L + R G+ T E VE +F+ ++ GI Q F Y+R ++M
Sbjct: 345 LDGVCREASTKSGKSGTLGECVEDG---AFIYNLLERVGITQ----FTYQRAVTIMKGAA 397
Query: 382 ----LTLEITDTDEFLHIQT----ICDFATLVGTY--TRGFSIIIEP----FDERMPHIP 427
L + + H +T I +F + T + F + P F
Sbjct: 398 KMVQLGSDFMEAATGTHKETPLTEIANFIERLFTKRADQYFVTRVGPDTDNFKTSQRQRQ 457
Query: 428 DPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRD 486
P L C L +K + ++ S ++ SGTLSP++ + L V + R+
Sbjct: 458 GPTLSYWCFFPGLCLKELIEKNVGSFLLASGTLSPMESFSSELAMEFPVRLENPHVIQRN 517
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
I VLT G +++ F R + G +++ IVPDG++ FF SY M+
Sbjct: 518 QIWGGVLTHGPGGNVLNSSFRFRDTDNYKKEIGSVILSTAKIVPDGLLVFFPSYGVMNSC 577
Query: 547 IATWN--DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGKV 602
I W + G+ I K FIE + E Y +A + G RGA+FF+V RGKV
Sbjct: 578 IDHWRFVEGGLWAGIEASKTCFIEPSNSEEFQECYKRYNEALNDGTRRGAIFFAVCRGKV 637
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG------DFLTFDALR 656
+EGIDF R VI+ G+P+ +++ + +L D + +G ++ + A+R
Sbjct: 638 SEGIDFADKACRGVILTGIPYAGAKDPLVMHKRSFL-DKRRANDGESYSGNEWYSQTAMR 696
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q +GR IR K D+G +I AD+R++ + R++L W+
Sbjct: 697 AVNQALGRAIRHKNDFGAVILADERFANENARNQLSLWL 735
>gi|444517021|gb|ELV11342.1| Regulator of telomere elongation helicase 1 [Tupaia chinensis]
Length = 1288
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 186/799 (23%), Positives = 325/799 (40%), Gaps = 124/799 (15%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L V V FP+ Y Q YM ++ L K H LLE PTGTGKT+ LL ++
Sbjct: 6 LGGVVVDFPF-QPYKCQEQYMTKVLECLQKKVHGLLESPTGTGKTLCLLCTTLAWREHLR 64
Query: 60 --------------------------VLSKPENPV-------KLIYCTRTVHEMEKTLAE 86
++ +P+ K++Y +RT ++ + + E
Sbjct: 65 DSISARKIAERVPGELFSDQALSWGNAVAVDGDPIACYSDIPKILYASRTHSQLTQVIGE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA-- 144
L+ +Y+ K+ +G SR+ LC++ V E+ + + RT WV A
Sbjct: 125 LRST-SYRP-------KVCVLG--SREQLCIHPEVKRQES-----SHVQVRTLPWVPAGG 169
Query: 145 ------------------------LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
L +C F+ N E+ + L + ++DL
Sbjct: 170 VHLRQEWQVRLHSSLVLAFLLQIHLCRRKVASRSCHFYNNVEEWSQEQELSSPILDIEDL 229
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
G Q CPY+L+R+ Q A+++ Y YLLDPK ++ K +VV+ DEAHN++
Sbjct: 230 VRSGSQHRVCPYYLSRNRKQQADLIFMPYNYLLDPKSRRAHGIDL-KGTVVILDEAHNVE 288
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
+C E+ S + + L ++ +E + + + LR
Sbjct: 289 KMCEESASFDLTPHDVASGLDALDQVLEEQTKLAQRSESHPELSTDATNSAILLRLE--- 345
Query: 301 AWLSNPALPSDILKEAVPGN------------IRRAEHFLHVLRRLVQYLRGRLETENVE 348
A + LP D PG+ + + L L +++Q+L GR
Sbjct: 346 AAIDAVELPGDRGGVTKPGSYIFELFAEAQITFQTKDCILDSLDQVIQHLAGRNVQLGPG 405
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFA----TL 404
P+ + G T +RL ++ T+ D + A L
Sbjct: 406 ATPPLLCCGPSSCPTGAGVLTNTAGLQRLTDILQTVFSVDPPDSSPGSGGGPEALQPYKL 465
Query: 405 VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPID 463
V + G + + VL C +++ V +++++TSGTL+P+
Sbjct: 466 VAAGSAGAMRVRAQWPSPTLTPTGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVS 525
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD----PGVARNYG 519
+ + V + + I V+ +G D +S+ FD R++ PG ++G
Sbjct: 526 SFALEMQVPFPVCLENPHVIDKHQIWVGVVPKGPDGAQLSSAFDKRTEQPPLPGAGGDWG 585
Query: 520 KLLVEMVS-------IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
++ + +VP G++ FF SY M++ + W + + + K +F+E +
Sbjct: 586 TRCGDLAAFAGNIARVVPHGLLVFFPSYPVMEKSLEFWRARDLTRRVEVQKPLFVEPRSK 645
Query: 573 VETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
+ LD Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 646 GSFSEVLDAYYKRVAAPGSSGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPR 705
Query: 631 LLARLEYLRDTFQIKEG---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
++ ++++L D + + G D+ A R Q VGRVIR + DYG + D R
Sbjct: 706 VVLKMQFL-DEMKARSGAGGRCLSGQDWYRMQASRAVNQAVGRVIRHRHDYGAIFLCDHR 764
Query: 682 YSRHDKRSKLPGWILSHLR 700
++ D R++LP W+ +++
Sbjct: 765 FAHADARAQLPSWVRPYVK 783
>gi|145525952|ref|XP_001448787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416353|emb|CAK81390.1| unnamed protein product [Paramecium tetraurelia]
Length = 901
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 189/793 (23%), Positives = 339/793 (42%), Gaps = 118/793 (14%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS-- 62
+++ VYFP+ Y Q +YM + +AL+ K + LLE PTGTGKT++LL +++
Sbjct: 52 IDNTPVYFPHQ-PYEVQKAYMESVIQALNMKQNALLESPTGTGKTLSLLCASLAWLKKNR 110
Query: 63 -------KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
+P+N +K+IY +RT ++++ ELK P +L SR
Sbjct: 111 QDQQSSDQPKN-IKIIYSSRTHAQLKQVAMELK------KTIYKPNVSMLG----SRDQY 159
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVY 175
C+ + ++ +CRK V+A C+F++ A V
Sbjct: 160 CIRGE-FSMLKGTLLNQSCRKS----VKA--------NQCQFYKKEHLIVMAQSYSTLVS 206
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
+L++ R FG + CPY+ R + A++++ Y YLL+ ++ E S+++FDE
Sbjct: 207 SLEEARQFGLKNKLCPYYFERQRLDSADLILLPYNYLLEKDFQDVVQIE---NSILIFDE 263
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALR 295
AHN+ + + S + + A ++L + E+E A Y++L L
Sbjct: 264 AHNVQSTAEDGSSFFITLNNIVEAEKDLEKWIDELESVAAF--------YDQLKTKL--- 312
Query: 296 GNLPNAWLSNPALPSDILKE--AVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
N A S +KE ++ I+ +L + Q++ E + + +G
Sbjct: 313 ---------NAAKVSSEMKEFKSIMITIKVFAQYLESFKTNQQFISSDKEEKYLILDGR- 362
Query: 354 SFVASITAHAGIDQKTLRFCYER-LHSLMLTLEITDTDEFL-HIQTICD----------- 400
A I + + T + E L + + T+ ++L H T+ D
Sbjct: 363 KISAMIFQYTQDKENTFKLWQENSLTNYAKGVNKTNFSKYLIHCSTLIDVMGELSQIPGY 422
Query: 401 -FATLVGTYTRGFSIII----------------EPFDE-RMPHIPDPVLQLSCH----DA 438
F + V + +I F++ ++ + D QLS H +
Sbjct: 423 HFESWVKFMKNVYDLITVEEEREKQQLSISSLQNEFNQYKLSFVLDQSNQLSIHMWCLEP 482
Query: 439 SLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT-RG 496
SLA ++++ S+++TSGTLSP+ + L F + L + I + R
Sbjct: 483 SLAFSRLYNKSIHSILLTSGTLSPMPSWSCELRI------PFDVQLANEHIIDLDKNLRI 536
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
++ R + +G L+ + +P+GI+ F SYS M + + W + ++
Sbjct: 537 FQHKTYDFSYNQRDNEEYICGFGVTLLSLCQTIPNGILVIFSSYSLMFKFRSKWTQNKLI 596
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
+ + K+ E Q + D Y++ +GA+ F+V RGKVAEGIDF R +
Sbjct: 597 PRLSELKVCLWEPQQSNQMQNVFDTYKEKS--KKGAIMFAVHRGKVAEGIDFSDELCRAI 654
Query: 617 IMFGVPFQYTLSKILLARLEYLRDTF---------QIKEGDFLTFDALRQAAQCVGRVIR 667
+ GVP+ LL ++ YL + +IK ++ T A+R Q +GRVIR
Sbjct: 655 FLVGVPYPPKKDNHLLEKMNYLDRIYNDLEFNHQQRIKSSEWYTQQAIRATNQAMGRVIR 714
Query: 668 SKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYD 727
DYG++ DKR+ + + R L W ++ ++ D + +EF + A +
Sbjct: 715 HINDYGIVYLCDKRFEQKEIRQGLSKWAQPAIQPW---INDDDVIKQTKEFFNRTASNKE 771
Query: 728 KAGSIGRKTLLSQ 740
+ I +K L Q
Sbjct: 772 QE-RIEKKPFLEQ 783
>gi|384253151|gb|EIE26626.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 812
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 195/780 (25%), Positives = 319/780 (40%), Gaps = 134/780 (17%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL--------S 54
+ + + V FP++ Y Q +YM + AL + LLE PTGTGKT+ LL S
Sbjct: 4 YSIRGIEVQFPHE-AYECQVTYMERVITALQEGKNALLESPTGTGKTLCLLCATLAWQES 62
Query: 55 LITSYVLSKPENPVK---------------------LIYCTRTVHEMEKTLAELKLLHNY 93
L V K N + +IY +RT ++ +TL
Sbjct: 63 LKQGKVTKKMHNHISHTKKSFGLTDLRSGDLSATPTIIYASRTHSQLAQTL--------- 113
Query: 94 QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIE 153
R P A IL SR+ +C+N V +++ ACR +S
Sbjct: 114 -WRWCRPRAAILG----SRQQMCLNPGVKRLPG-GAMNQACRAHVSS------------R 155
Query: 154 TCEFFENYEKAASAAVLPPGV----YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
TC + Y K S + P +++L G G CP++L+R M A +V Y
Sbjct: 156 TCSW---YNKVESWTRMHPDANGEALDIEELVRLGSSGGPCPFYLSRDMASTAQIVFMPY 212
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
YL+D K+ G I +V+VFDEAHN++ VC +A S + L A +++ + E
Sbjct: 213 NYLVDAKIRGGIKMLSWDNAVLVFDEAHNVEGVCSDAASFDLTGALLGTALQDV-QAAVE 271
Query: 270 IERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSN--PALPSDILKEAVPGNIRRAEHF 327
+ K R +L++ L + G L LS A+ S G + E
Sbjct: 272 VALLK-------RDGEAQLIQDLRMLGAL----LSKLEGAIASLAASAGNNGYTAKGEFL 320
Query: 328 LHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEIT 387
+L ++ E + E A + + A +Q R+ + L
Sbjct: 321 FELLAKIGLNTDNHFYMERLLDE-----AADLLSGAAAEQGR-RWAPQFLQ--------- 365
Query: 388 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPD---PVLQLSCHDASLAVKP 444
DE + C + ++G++I + + H P L C + +A+
Sbjct: 366 -IDELFLLTFYCSKSVFA---SQGYAICCLFWKSKWAHGCGQEVPTLSYWCFEPGVAMAA 421
Query: 445 VFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
+ + + +++TSGTL+P+D + + L+ V+ + + V+ G + ++
Sbjct: 422 LCALKVRCILLTSGTLAPLDSFAQELSLDFPVTLENPHVVNTSQVWVGVVPVGPKGVVLN 481
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN-DSG-------- 554
+ + R+ P + G L IVPDG++ FF SY+ ++ + W +SG
Sbjct: 482 SSYATRTSPAYMEDLGLALANWARIVPDGLLVFFASYTVLEACLRHWKANSGDQRGGVLG 541
Query: 555 ----ILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDF 608
+ I++ K IE + E A D+YR RGA+FF+V RGKV+EG+DF
Sbjct: 542 FNGTLWDRIVRDKQAVIEPRRSEEFQAAADDYRAKLKDPSSRGAIFFAVCRGKVSEGLDF 601
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT-----------------FQIKEGDFLT 651
GR V++ G+PF + + E L +T ++ + +
Sbjct: 602 SDRAGRAVVITGLPFAMVTDPKVRLKKEVLDETRRSAGAAKRTRDGAAPALRLTGEAWYS 661
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
A R Q +GRVIR DYG +I AD+R+ + +L W L L H N A
Sbjct: 662 QQATRAVNQAMGRVIRHMHDYGAIILADERFKSETNQRQLSKW-LRPLSKTHTNFGEAAA 720
>gi|350414537|ref|XP_003490348.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Bombus impatiens]
Length = 980
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 192/811 (23%), Positives = 328/811 (40%), Gaps = 138/811 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKT--------------- 49
+ +V V FP+ Y Q YM+++ L + +LE PTGTGKT
Sbjct: 6 INNVIVNFPF-KPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKTLSLLCSSLSWLLTKK 64
Query: 50 --IALLSLITSYVL---------------------SKPEN-----PVKLIYCTRTVHEME 81
+ SLI + SKP + P K+IY +RT ++
Sbjct: 65 AQLQAQSLIGAIEKPDFGGHFFKQLSNGLKEGTGDSKPTSNLGWAPPKIIYASRTHSQLS 124
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK +H+ A L SR LC++ V + + C + S
Sbjct: 125 QAMQELK---RTSYKHVSTAV------LGSRDQLCIHPEVSKETSSSNKIYMCHSKIKS- 174
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
TC ++ N E + V ++DL G++ CPYFL+R + Q
Sbjct: 175 -----------RTCFYYNNVESRKDDPLFKQEVLDIEDLVKAGQKFKCCPYFLSRELKQN 223
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
A++ Y YLLD K ++Q ++++ DEAHNI+ C EA S+ + +
Sbjct: 224 ADITFMPYNYLLDSKSRKTQGIDIQ-NNIILLDEAHNIEKTCEEAASLQI-------CST 275
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+++ EI A + E + +E GN + ++ ILK A+ +
Sbjct: 276 DIAMCIDEITAVMEDMASNVEQENDFSMEN---SGNTVKDFTADDLC---ILK-AMFLEL 328
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM 381
+A + +L R N P ++ + A + + E+L +
Sbjct: 329 EKAIDAIEILNR------------NEGDTFPGGYIFELLGKAQLTHGREQLVIEKLEKIA 376
Query: 382 LTLEITDTDEFLHI-QTICDFATLVGTYTRGFSIIIEP-FDERMPHIPDPVLQL-----S 434
L T T F + F+ L+ T FS P + E++ +QL +
Sbjct: 377 FYLTTTSTSPFTRKGHALQKFSDLLKTV---FSSGNSPRYREKIKQCYKVYIQLEEQKKT 433
Query: 435 CHDASLAVKPVFDRFQSVVIT------------------------SGTLSPIDLYPRLLN 470
+ K + + +S VI+ SGTLSP+ + L
Sbjct: 434 KQNEVWETKKILKKNESKVISYWCFSPGFSMQQLMDQGVRSIILTSGTLSPLKPFISELG 493
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
+ + D IC VL++G D +++ F+ R+DP + G+ ++ I+P
Sbjct: 494 IPIELQLENPHIVKGDQICVGVLSQGPDGYSLNSSFNTRNDPKYIASLGRTVLNFSCIIP 553
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR---KACD 587
G++ FF SY M + W +G+ +I K +++E Q ++ Y K
Sbjct: 554 HGLLVFFPSYPIMKKCKEEWQTTGLWTKIADRKPIYVEPQYRDGFINVMNEYYEKIKDPS 613
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD-TFQIKE 646
C +GA+F +V RGKV+EG+DF GR V++ G+PF ++ + YL + Q KE
Sbjct: 614 C-KGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPRVILKQRYLEEMKKQNKE 672
Query: 647 G----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA 702
+ +A R Q +GR+IR K DYG +I D R+ + L W+ H+++
Sbjct: 673 ALSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDCRFDNPSFKKHLSAWLRPHIKNF 732
Query: 703 HLNLSTDMALHIAREFLRKMAQPYDKAGSIG 733
S + + ++F R + + +G
Sbjct: 733 ---TSFGIIMKELKDFFRYAGHTFPQPNMLG 760
>gi|426241833|ref|XP_004014789.1| PREDICTED: regulator of telomere elongation helicase 1 [Ovis aries]
Length = 1305
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 196/810 (24%), Positives = 339/810 (41%), Gaps = 160/810 (19%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LKGVTVDFPF-QPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 55 --------------------LITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
+ S+ + PE V K+IY +RT ++ + ++E
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW----- 141
L+ +Y+ R L SR+ LC++ V E+ CR++ A
Sbjct: 125 LRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQVHLCRRKVAGRSCHFY 174
Query: 142 --VRALAAENPNIETCE--------------FFENYE------KAASAAVLPPGVYTLQD 179
V A P++ + F+ + E K+ + P + ++D
Sbjct: 175 NNVVYCGALRPSVSMLQGVDCGCLRGSGLAAFYTSLELRCLSEKSLEQELATP-ILDIED 233
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G + CPY+L+R++ Q A+++ Y YLLD K S ++ K +VV+FDEAHN+
Sbjct: 234 LVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHSIDL-KGTVVIFDEAHNV 292
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIE-RFKATDAGRLRAEYNRLVEGLALRGNL 298
+ +C EA S + T L I+Q +E + K L E++ G L L
Sbjct: 293 EKMCEEAASFDL---TPHDVASGLDVIDQVLEEQTKVAQQAELHPEFSADSAGSGLNLEL 349
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG------- 351
D+ K L+ ++ L G ++ VE G
Sbjct: 350 -----------EDLAK----------------LKMILLRLEGAIDA--VELPGGNSGVTK 380
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE-----ITDTDEFLHIQTIC------- 399
P S++ + A A I +T + L L+ L T+T + I
Sbjct: 381 PGSYIFELFAEAQITFQTKGCILDSLDQLIQHLAGRAGLFTNTAGLQKLADIIQIVFSVD 440
Query: 400 ----DFATLVGTYTRGFSIII-------------EPFDERMPHIPDPVLQLSCHDASLAV 442
D +VG ++ + + I + ++ P VL C ++
Sbjct: 441 SAEGDPVPMVGLASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSM 500
Query: 443 KP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+ V +++++TSGTL+P+ + + V +++ I V+ +G D
Sbjct: 501 RELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVISQHQIWVGVIPKGPDGAQ 560
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+S+ FD R + GK+L + +VP G++ FF SY M++ + W +++
Sbjct: 561 LSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRAHDFTRKLEV 620
Query: 562 HKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
K +F+E + + ++ + R A GA+F +V RGK +EG+DF GR VI+
Sbjct: 621 RKPLFVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCRGKASEGLDFADMNGRGVIVT 680
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQAAQCVGRVIRSKA 670
G+P+ + +L ++++L D + + G D+ A R Q +GRVIR +
Sbjct: 681 GLPYPPRMDPRVLLKMQFL-DEMKAQSGAGGQFLSGHDWYRQQASRAVNQAIGRVIRHRH 739
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
DYG + D R++ D R++LP W+ H++
Sbjct: 740 DYGAVFLCDHRFAHADTRAQLPSWVRPHVK 769
>gi|328783139|ref|XP_396001.4| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Apis mellifera]
Length = 976
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 176/783 (22%), Positives = 328/783 (41%), Gaps = 137/783 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKT--------------- 49
+ ++ + FP+ Y Q YM ++ + L + +LE PTGTGKT
Sbjct: 6 INNIIINFPFKP-YSIQEEYMAKVIQCLQNSKNGVLESPTGTGKTLSLLCSSLSWLLTKK 64
Query: 50 --IALLSLITSYVLSKPE---------------------------NPVKLIYCTRTVHEM 80
+ SL+ + + +P N K+IY +RT ++
Sbjct: 65 AQLQAQSLVNT--IEEPNFGGHFFKQLNNGLKKSTGDSESITFNWNAPKIIYASRTHSQL 122
Query: 81 EKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTAS 140
+ + ELK +H+G A L SR LC++ V N + C + S
Sbjct: 123 SQAMQELK---RTSYKHVGTAV------LGSRDQLCIHPEVSKETNSSNKIYMCHSKVKS 173
Query: 141 WVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQ 200
TC ++ N E + ++DL G++ CPYFL+R + Q
Sbjct: 174 ------------RTCFYYNNIESRKDDPFFKQEILDIEDLVKAGQKFKCCPYFLSRELKQ 221
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV----------------CI 244
A+++ Y Y+LD K I ++Q ++++FDEAHNI+ + CI
Sbjct: 222 NADIIFMPYNYILDAKSRKIQGIDIQ-NNIILFDEAHNIEKICEETASLQISSTDIAMCI 280
Query: 245 EALSVSVRR--QTLEGATRNLSRINQEIER-FKATDAGRLRA---EYNRLVEGLALRGNL 298
+ ++V + + +E L ++ +++ F A D L+A E + ++ +++
Sbjct: 281 DEITVVMEDMAKDIEQQNNFLMENSENVQKDFTADDLCILKAMFLELEKAIDAISIVKRD 340
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ PG ++ L Q + GR E +EK + F +
Sbjct: 341 EG--------------DTFPGG------YIFELLGKAQLIHGR-EQLVIEKLEKIVFYLT 379
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
T+ + +K ++ L+ T +D F + + + S +
Sbjct: 380 TTSTSPFTRKGNAL--QKFSDLLKTAFSSDNSLFSKEKIKQYYKVYIQLEEHKKSKQNDV 437
Query: 419 FDER--MPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVV 475
+D++ + ++ C +++ + ++ +++++TSGTLSP+ + L V
Sbjct: 438 WDKKKILSKNEGKIINYWCFSPGFSMQQLKNQGARAIILTSGTLSPLKPFISELGIPIEV 497
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+ D IC +L++G D +++ F+ R+DP R+ G+ + +VP G++
Sbjct: 498 QLENSHIVKEDQICVGILSQGPDGYSLNSSFNTRNDPKYIRSLGQTIFNFSCLVPYGLLV 557
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLV--------FIETQDVVETTLALDNYRKACD 587
FF SY M + W ++G+ +I K++ I + + + Y K D
Sbjct: 558 FFPSYPIMKKCKEEWQNTGLWTKIADRKVIIFNIYIKMIIYNKKDGFINVMNEYYEKIKD 617
Query: 588 CG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE 646
GA+F +V RGKV+EG+DF GR V++ G+PF ++ + YL +IK+
Sbjct: 618 PSCTGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPPLKDPRVILKQRYLE---EIKK 674
Query: 647 GD--------FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
D + +A R Q +GR+IR K DYG +I D R+ + +L W+ H
Sbjct: 675 QDKEALSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILCDYRFDNPSFKKQLSAWLRPH 734
Query: 699 LRD 701
+++
Sbjct: 735 IKN 737
>gi|327284022|ref|XP_003226738.1| PREDICTED: regulator of telomere elongation helicase 1-like [Anolis
carolinensis]
Length = 1142
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 181/755 (23%), Positives = 325/755 (43%), Gaps = 110/755 (14%)
Query: 4 KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY---- 59
KL +TV FP++ Y Q YM + L + + +LE PTGTGKT+ LL ++
Sbjct: 5 KLNGITVDFPFEP-YKCQEEYMSRVLECLQKQVNGILESPTGTGKTLCLLCSTLAWQEHF 63
Query: 60 -----------------------------VLSKPENPV------KLIYCTRTVHEMEKTL 84
++ E P K+IY +RT ++ + +
Sbjct: 64 KDAISAQKIAQRLGGAELFADRPMSFWGNAVTDAELPAYYTDIPKIIYASRTHSQLTQVI 123
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
ELK N R K+ +G SR+ LC++ V E+ CR + +
Sbjct: 124 GELK---NTVYR-----PKVCVLG--SREQLCIHPEVKKQESNHVQIHMCRMKVTT---- 169
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
TC F+ N E+ ++ L + ++DL G + CPY+L+R + Q A++
Sbjct: 170 --------RTCHFYNNVEEKSTEKELINPILDVEDLVKSGNKHRVCPYYLSRTLKQQADI 221
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID---NVCIEALSVSVRRQTLEGATR 261
+ Y YLLD K AHN+D V I + +V +Q E A+
Sbjct: 222 IFMPYNYLLDSKSR----------------RAHNLDLKGTVVILDEAHNVEKQCEELASF 265
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNI 321
+L+ + A DA + E + ++ N N+ + + S++ E +I
Sbjct: 266 DLT----PYDLASAMDAISIVLEE----QAKKVQQNEFNSEFNMERVSSELNMEV--EDI 315
Query: 322 RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM 381
+ + L +L + + + + K+G S++ + A A I +T E L +
Sbjct: 316 AKIKKILLLLEDAIDAVELAPDGSGITKDG--SYIFDLFAKAQITFQTYSSILESLEQIQ 373
Query: 382 LTLE-----ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCH 436
L T+T I + + + ++ + VL C
Sbjct: 374 QYLAGRTGIFTNTAGLHKCTDIIQVHIHPDSSNQRKKQRTDLWNSSVTKKQGKVLSYWCF 433
Query: 437 DASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTR 495
++ + + +++++TSGTLSP+ + + + + + + +L +
Sbjct: 434 SPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPICLENPHVIDKHQVWVGILPK 493
Query: 496 GSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI 555
G D +S+ ++ R P + GK + +V I+P G++ FF SY MD+ + W D
Sbjct: 494 GPDGGLLSSTYEKRFSPECLSSLGKTIGNLVKIIPHGLLVFFPSYPVMDKSLEYWKDHRF 553
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYG 613
+++I K +F+E ++ T +D Y + C +GAVF +V RGK +EG+DF G
Sbjct: 554 VEKIEAVKPIFVEPRNKGTFTEVIDAYYEKIVCPKAKGAVFLAVCRGKASEGLDFADTNG 613
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE--GDFLTFD------ALRQAAQCVGRV 665
R VI+ G+PF L ++ ++++L D + + G FL+ + A R Q +GRV
Sbjct: 614 RGVIITGLPFPPRLDPRVVLKMQFL-DEMRARSGGGQFLSGNSWYKQQASRAVNQAIGRV 672
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
IR + D+G + D R+ D R++LP W+ +++
Sbjct: 673 IRHRQDFGAIFLCDHRFMNIDTRAQLPSWVRPYVK 707
>gi|301094332|ref|XP_002896272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109667|gb|EEY67719.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 988
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 165/675 (24%), Positives = 293/675 (43%), Gaps = 66/675 (9%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-------AAKILAIGLSSRKNLCVNS 119
P ++ +C+RT ++ + + ELK N +L ++ L S++N+CVN
Sbjct: 229 PPQIFFCSRTHSQLAQVVDELK---NCPVSYLDSPEDSNTYTKQLQTCVLGSKRNMCVNR 285
Query: 120 RVLAAENRD--SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+V NRD VD CR LA E +C FF +K P V+ +
Sbjct: 286 KV----NRDPSQVDEKCR---------LALEG---SSCSFFRKRKKTNDLKRSVPPVWDI 329
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL ++ C YF AR + AN+V Y YLLDP + G + + K++++V DEAH
Sbjct: 330 EDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRGAVGITL-KDAIIVLDEAH 388
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAG-RLRAEYNRLVEGLALRG 296
N+++ C + SV V L + + + + + R K +A +L NR ++ +
Sbjct: 389 NVEDTCRSSASVEVTTDALAASIKAFTIVIKHGNRPKTYNALLKLLNGINRWLQSVDSNA 448
Query: 297 NL----------PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
N W AL +L E E ++ + +Y G +
Sbjct: 449 NAILQPSGYEEKSKVWDGADALA--MLAEYSGLTKDNLEEMKENVQEVREYENGLGNSAE 506
Query: 347 VEKEGPVSFVASITAH-AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLV 405
++ P A+ G + S+M ++ D I+ DF +V
Sbjct: 507 SSQQPPTQAAQDAAANPTGASVLLGALALATVESIMNVVDYMFRDRLKFIE---DFKLVV 563
Query: 406 ----GTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSP 461
T+ S P + + + C +A++A + + +SV++TSGTLSP
Sbjct: 564 IKSKSTWKENASFR-SPTKRNGGDEWELKMCIWCLNAAVAFSDIASQARSVILTSGTLSP 622
Query: 462 IDLYPRLLNFH-PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGK 520
++ + L P+ + + R + + G + + + ++ + DP + G+
Sbjct: 623 MESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSMGQ 682
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVET-TLAL 579
LL++ +P GI+ FF SYS ++++ W + + EI Q K ++ E ++ + L
Sbjct: 683 LLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKTKLWGEIEQFKAIYSEPRNAGKDFDRLL 742
Query: 580 DNYRKACDCGR--------GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS-KI 630
++Y++ C + GAVF +V RGKV+EGIDF R V+ G+PF ++
Sbjct: 743 EDYKETITCSKDGDDGNKTGAVFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPSVKELQV 802
Query: 631 LLARL---EYLRDTFQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
L R E R ++ G + A R Q +GR IR + DYG ++ D R+ +
Sbjct: 803 SLKRKYQDEKSRMNMKLVNGHIWYNLQAFRALNQALGRCIRHRQDYGAIMLLDSRHRFNK 862
Query: 687 KRSKLPGWILSHLRD 701
L W+ ++++
Sbjct: 863 HTKSLSKWMRPYIQE 877
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 3 FKLEDVTVYFPYDN-IYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
F + V FP +P Q++ M ++ AL + H LLE PTG+GKT+ALL
Sbjct: 9 FMIMGYNVEFPQGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALL 60
>gi|301111400|ref|XP_002904779.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095109|gb|EEY53161.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1058
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 216/821 (26%), Positives = 355/821 (43%), Gaps = 137/821 (16%)
Query: 2 IFKLE--DVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 59
+ KLE + V FP+ Y Q YM ++ AL +K + +LE PTGTGKT+ LL ++
Sbjct: 1 MVKLEICGIPVEFPFPP-YDSQLIYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAW 59
Query: 60 -----------VLSKPENP--------------------VKLIYCTRTVHEMEKTLAELK 88
L+ + P ++IY +RT ++++ + ELK
Sbjct: 60 RRELQKKLGTNTLAPAKRPGPSLAYEGYGSDGESDAPQLPRIIYSSRTHSQLKQVVQELK 119
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
N R P +L SR++LCVN +V + ACR T R +
Sbjct: 120 ---NTSYR---PNVAVLG----SREHLCVNEKVSKLRGTRQ-NLACRS-TCKDRRCMHKL 167
Query: 149 NPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
F++Y K + P + +++L K++ CP+FL R+M+ A +V
Sbjct: 168 G--------FDSYAKRSKKQAQP--IMDIEELVTTMKEKIICPFFLTRNMLPEAEIVFVP 217
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y YL+DP I ++ S+++FDEAHN++++ EA S ++ + G +S ++
Sbjct: 218 YNYLIDPMARRSIGISIEN-SILIFDEAHNVESIASEAASYALSSNDISGC---ISEVDT 273
Query: 269 EIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFL 328
I R +T++ +L A N +E A+ + L LP PG
Sbjct: 274 FI-RGLSTNSIQLNAGSNLTLEDSAV-----SRCLRMEVLPR------YPG--------- 312
Query: 329 HVLRRLVQYLRGRLETENVEKEGP---VSFVASI--TAHAGIDQKTLRFCYERLHSLMLT 383
QY+ E NV E +S + I AH G D + + + S + T
Sbjct: 313 -------QYIFEFFEQFNVNFETCPLVLSMIEEIIEVAHGGDDSQRAASKLDTMLSFLGT 365
Query: 384 LEITDTDEF-------LHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCH 436
+ + +HIQ I + + G R F+ + V C
Sbjct: 366 IFRSKEQHLQAAKNYRVHIQEIRERPSNSG---RLFN-----SGRKNKTTTTRVFNYWCF 417
Query: 437 DASLAVKPVF-DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTR 495
+A + + + +V++TSGTLSP+D + L V + D + V+
Sbjct: 418 HPGVAFREICTNNVHNVILTSGTLSPLDTTVKELGIDFPVRLENNHVVDADQVWVGVVGT 477
Query: 496 GSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG- 554
G +++ ++ RS G +V +VP G++ FF SYS ++E I W
Sbjct: 478 GVTGKKLNSSYNFRSTETYLLELGNTIVNFTRLVPHGLLVFFPSYSILEESIDKWQRPAT 537
Query: 555 ------ILKEIMQHKLVFIETQDVVETTLALDNYRKA-CDCGRGAVFFSVARGKVAEGID 607
I I+Q K F+E + + +D Y +A D +GAVFF+V RGKV+EGID
Sbjct: 538 GQSALSIWDRIVQQKQTFVEPRGRADFKAVVDEYHQAIADNPKGAVFFAVCRGKVSEGID 597
Query: 608 FDRHYGRLVIMFGVPFQYTLS-KILLARLEYLRDTFQIKEGDF-LTFDA--LRQAA---- 659
F GR VI+ G+PF T KI+L + + D + G+ LT +A ++QA+
Sbjct: 598 FSNDKGRAVIITGLPFPPTKDPKIMLKK--SILDEAVVSPGELKLTGNAWYIQQASRAVN 655
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR------DAHLNLSTDMALH 713
Q +GRVIR + DYG +I D+R++ ++ L W+ + +AH+ L+ +
Sbjct: 656 QAIGRVIRHRHDYGAIILLDERFALKQQQECLSKWLQPYCHTCRGYGEAHIGLTRFFKTN 715
Query: 714 IAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINE 754
R + + IG LS+ + K + S NE
Sbjct: 716 KTRAVPESSKKILQQPKPIG----LSKRAMSKSSKISSDNE 752
>gi|388583056|gb|EIM23359.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 831
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 162/657 (24%), Positives = 289/657 (43%), Gaps = 84/657 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
K+ + +RT ++ + ++E+ K + R I L+SRKNLC+N + A N
Sbjct: 203 TKIFFASRTHSQLSQFISEINKTTYKQDAR---------VISLASRKNLCINEK---ARN 250
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP----PGVYTLQDLRA 182
DA +R A A+ + C+F+ E+ + ++DL
Sbjct: 251 APGGDAGLNERCRELRTAPASSE---KRCKFYPKIEEQTKLLEFRDHALASIRNVEDLEE 307
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
GK CPY+ +R ++ + + Y LL + + + K+ +VV DEAHN+ +
Sbjct: 308 LGKNLNVCPYYGSRRAIKQSEICTLPYNLLLSKRARESMGISL-KDHIVVIDEAHNLIDT 366
Query: 243 CIEALSVSVRRQTLEGATRNLSR-INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA 301
+ S SV +TL A + LS I + +R K L+ Y + ++GL +
Sbjct: 367 ILAVHSCSVSLKTLNAAMKALSTYIQRYGKRLKGNHVVSLKL-YAKTLKGLINFCQKVRS 425
Query: 302 WLSNPA-----LPSDILKE-AVPGNIRRAEHFL---HVLRRLVQYLRGRLETENVEKEGP 352
P LP D++ + N+ E +L H+ ++L + + + + K G
Sbjct: 426 VNKKPTQEIIYLPKDVVGDFGEDVNLGNVEAYLRDSHMSQKLGSFAEREAKKDGL-KNGQ 484
Query: 353 VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGF 412
++ S++ + ++ SL+L L D D
Sbjct: 485 LTSPESLSYASA-------NSMHQVQSLLLALAYPDAD---------------------- 515
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH 472
++ FD +P + +L + H K + D +S+++ GT+ P+ + L
Sbjct: 516 GRVVVTFDAEIPRLSYQLLNGAEH-----FKSIVDDARSIILAGGTMHPVSDFKTFL--M 568
Query: 473 PVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMV 526
P + S SL+ + + P +T+G + +F+ RS + G ++ +V
Sbjct: 569 PSLPASRFNSLSCEHVIPPTNLLATAITKGPSGQEMDFRFENRSKVDLLNELGMIIQNLV 628
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA- 585
+++PDG+V FF SY Y++ + + W SG+LK I Q K VF E ++ + LD Y +A
Sbjct: 629 NLIPDGLVIFFPSYGYLNTVESHWKASGLLKRIEQKKKVFREPKESTDVQATLDKYAEAI 688
Query: 586 ---CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR--- 639
D G++ F+V K++EGI+F + R + M G+PF + S L R Y+R
Sbjct: 689 LNKSDKMTGSILFAVVGAKLSEGINFSDNLARGIAMVGLPFP-SPSPALEERKNYVRSFN 747
Query: 640 -DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q + + +R Q +GR IR + D+ +I DKR++ ++KLPGWI
Sbjct: 748 KQANQDTGNELVMNQCMRAVNQSIGRAIRHQNDWAGLILIDKRFATSQIQNKLPGWI 804
>gi|332025865|gb|EGI66021.1| Fanconi anemia group J protein-like protein [Acromyrmex echinatior]
Length = 653
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/669 (23%), Positives = 296/669 (44%), Gaps = 100/669 (14%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ Y +RT ++E+ + E K + K + I LSSRK C+ E
Sbjct: 29 KIFYGSRTHGQLEQVVKEFK--------KTAYSHKRMTI-LSSRKKTCIQ------ETDK 73
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFF-ENYEKAASAAVLPPGVYTLQDLRAFGKQQ 187
+ D C + ++A + C+++ ++ +K + + ++DL + GK+
Sbjct: 74 NKDKLCNELLDPRLKA--------KKCKYYNDDAKKKPTIFSKMDTPWDIEDLVSLGKEV 125
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEAL 247
G CPYF AR ++ A ++ Y Y+L P++ + + + ++V+ DEAHNI+N+C EA
Sbjct: 126 GTCPYFGARVLMADAEIIFCPYNYILYPEIRDSMQINL-RGNIVILDEAHNIENICREAA 184
Query: 248 SVSVRRQTLEGATRNLSR-INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNP 306
+V +R L A + ++ + + + + + + ++ N N +S
Sbjct: 185 TVDIRDDKLLIAVKECKHFLDMDYKSITYATIHEYLTDLIKFLNDIEVKDNDRNEMVSKH 244
Query: 307 ALPSDILKEAVPGN---IRRAEHFLHVLRRLVQYLRGRLETENVEKEGP----------- 352
+ + + +E + N R F+ + + + ++ EN +K P
Sbjct: 245 WVGA-VFRELLNVNEIGCPRFPDFIAASKIAIDDFKQNMKEENSKKINPTISQESKKLLE 303
Query: 353 -VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
+ F + A +D R C I +T+EF+ T D+ + T+
Sbjct: 304 YLCFGMQMIASDKVDD--YRMC------------IVETNEFIEKVTENDWFSTTKKLTKV 349
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
++I L C + ++ +P+ +SV++ SGTL+P +++
Sbjct: 350 RTMI-----------------LKCMNPAIVFEPLAHEVRSVILASGTLTPT------VSY 386
Query: 472 HPVVSRSFKMSLTRDCICPM------VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
+ F + D I P + +G P+ +D + G L++++
Sbjct: 387 QSELGTKFSYIINPDHIIPKNQLYIRYIPQGLSGKPLKATYDQVNTWAFQDELGNLILQV 446
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA 585
VP G++CFF SY M+ I W ++GI ++ K +F+E + + + YR+
Sbjct: 447 CDAVPFGVLCFFSSYKAMNTIHNRWRNNGIWDKLSNLKTIFVEPKYEKDLNPVMKAYRRV 506
Query: 586 CDCG--------RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
+ RGA+FF+V R KVAEGIDF + R V+ G+P+ S + + ++EY
Sbjct: 507 IEESLSEQYQTVRGAIFFAVFRAKVAEGIDFSDNEARCVLAIGIPYLLQSSDVTM-KMEY 565
Query: 638 -----LRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKL 691
++ Q+ G ++ T +A R Q +GR +R K D+G ++ DKR+ + L
Sbjct: 566 NNLNKSNESRQLLSGSEWYTVNAFRALNQAIGRCVRHKNDWGAVLLVDKRFELQQNINYL 625
Query: 692 PGWILSHLR 700
P W+ +++R
Sbjct: 626 PKWVKTNVR 634
>gi|317032533|ref|XP_001395061.2| ATP-dependent RNA helicase CHL1 [Aspergillus niger CBS 513.88]
Length = 834
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 163/671 (24%), Positives = 284/671 (42%), Gaps = 109/671 (16%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
VK+ YC+RT ++ + E +L ++ + L SRKNLC+N RV + EN
Sbjct: 201 VKIFYCSRTHSQLTQFAGEEEL-----------EERVKHVTLGSRKNLCINPRVSSLENA 249
Query: 128 DSVDAACRKRTASWVRALAAENPNIET---CEFFENYEKAASAAVLP----PGVYTLQDL 180
+++ C L + PN+ C F + E V ++DL
Sbjct: 250 TAINERC----------LDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHALSTVKDIEDL 299
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
GK+ G CPY+ +R +V+ + +V Y LL ++ + K V++ DEAHN+
Sbjct: 300 GKLGKKIGICPYYASRSVVKDSEIVTLPYPLLLQRSAREALNSSV-KGHVIIIDEAHNLM 358
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
+ SV+V TL +LS++ +FK G+ R+ +++
Sbjct: 359 DAISNIHSVTV---TLSQLQTSLSQLTIYGRKFKTRLKGKNRSYVAQVI----------- 404
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
+L + +LR LE+ EGPV ++ +
Sbjct: 405 ----------------------------RLLSSIAAHLRSLLESGKA-PEGPV-LISELM 434
Query: 361 AHAGIDQ----KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGF--SI 414
+ G+DQ K R+ E + + + T + Q V + +GF S+
Sbjct: 435 SGKGVDQINPYKLSRYLQESKLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGFLLSL 494
Query: 415 IIEPFDERM---PHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
+ + R+ D L+ D + + + + +++++ GT+SP+ Y L
Sbjct: 495 MNPSAEGRLFYSKEQGDIQLKYMLLDPTNQFRELVEDARAIILAGGTMSPMTDYMNHLFS 554
Query: 472 HPVVSR----SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+ SR S+ + + + L RG +D R + + G+ + +
Sbjct: 555 YVPASRLDTFSYGHVIPPENLIAHTLVRGVQGSEFDFTYDARDSEKMIMDLGRTIATLCH 614
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKE-------IMQHKLVFIETQDVVETTLAL- 579
++PDG+V FF SY Y+ ++ W + ++ I Q K + E++D+ TT L
Sbjct: 615 VIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILSESRDMTVTTEELL 674
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL- 638
Y D GRGA+ SV GK++EGI+F GR V++ G+PF S + A+++Y+
Sbjct: 675 HTYANTVDSGRGALLLSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSAVWQAKIQYIE 734
Query: 639 RDTFQIKEG--------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 684
+ T Q G DF +R QC+GR IR + DY ++ D+RY +
Sbjct: 735 QKTHQQATGSEASRQLAAKAAGRDFYENSCMRAVNQCIGRAIRHRNDYAAIVLVDRRYEK 794
Query: 685 HDKRSKLPGWI 695
++KLP WI
Sbjct: 795 PGIQAKLPAWI 805
>gi|307177078|gb|EFN66346.1| Fanconi anemia group J protein [Camponotus floridanus]
Length = 772
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 175/703 (24%), Positives = 317/703 (45%), Gaps = 96/703 (13%)
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCV---- 117
+K + K+ Y TRT ++++ + ELK +T + IL SSR+ C+
Sbjct: 120 AKAQKVPKIYYGTRTHKQIQQVVRELK-----KTVYRDKRMTIL----SSRQYTCIQKSN 170
Query: 118 -NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
N L E D + + + L + + + F EK +
Sbjct: 171 KNKNELCKELLDPLKS---------TKCLYYNDQSKKRMALFNELEKP----------WD 211
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVF 233
++DL +FGK G CPYF AR ++ A ++ Y Y++DP I + MQ K +V+
Sbjct: 212 IEDLFSFGKDIGICPYFGARSLMDQAEIIFCPYNYIVDPH----IRESMQINLKGDIVIL 267
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI-----NQEIERFKATDAGRLRAEYNRL 288
DEAHNI++ C EA SV+ R L A + + N++ +R T + +
Sbjct: 268 DEAHNIEDTCREAASVNFRNDELRIAADDCTHWSRKYRNRDRDRDIYTIIETYLTDIAKF 327
Query: 289 VEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEH--FLHVLRRLVQYLRGRLETEN 346
+E + ++ N N ++N L ++ L NI ++ F + +Q+ E
Sbjct: 328 LEAIDVKQNSNNEMVNNCWLGAEFLVLLDMNNIGSSKFSAFHDASKMAIQHYE-----EM 382
Query: 347 VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
++ P V +I+ Q T R L L +++ +D F++ +C ++
Sbjct: 383 KQETRPDKIVQAIS------QDTKRI----LEDLCFAIQMLTSDTFVNDYRVC----VIE 428
Query: 407 TYTRGFSIII---------EPFD-ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITS 456
+ I+I + F+ + P +++L C + ++ P+ +SV++ S
Sbjct: 429 SMEPSKKIVIPENTWISTKKNFEFSFFKNKPLRIMKLLCMNPAVVFAPLARIVRSVIVAS 488
Query: 457 GTLSPIDLYPRLL--NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV 514
GTL+PI + L F VV+ +S +D + + RG + + F+ +
Sbjct: 489 GTLTPITSFQSELGTKFPHVVNPDHIIS--KDQVYVRCIPRGPNGKTLMANFENVNSWNF 546
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
G L++++ VP G++CFF SY M+++ W ++G ++ + K +F+E ++
Sbjct: 547 QDELGSLVLQVCDAVPYGVLCFFSSYITMNKLHDRWRNTGTWSKLEKLKKIFVEPRNNSN 606
Query: 575 TTLALDNY--------RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
++ Y K+ GA+FF+V RGKVAEGIDF + R V+ G+P Y
Sbjct: 607 LPTMMEEYCNVIRESSSKSFHVASGAIFFAVYRGKVAEGIDFSDNDARCVLAVGIP--YR 664
Query: 627 LSKILLARLEYLRDTFQIK----EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ ++ Y D+ + K ++ T DA R Q +GR IR K D+G ++ D+R+
Sbjct: 665 NKNEVSMKMNY-NDSNKSKGFLPGSEWYTVDAFRALNQALGRCIRHKNDWGAVLLVDERF 723
Query: 683 SRHDKRSKLPGWILSH-LRDAHLNLSTDMALHIAREFLRKMAQ 724
K + LP WI + + D + +L T++ IA + R+ +
Sbjct: 724 QNRHKINYLPKWIKTKWMYDGNYDLQTELQDFIATQVAREKGE 766
>gi|195340550|ref|XP_002036876.1| GM12432 [Drosophila sechellia]
gi|229891628|sp|B4I0K4.1|RTEL1_DROSE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194130992|gb|EDW53035.1| GM12432 [Drosophila sechellia]
Length = 966
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 172/762 (22%), Positives = 324/762 (42%), Gaps = 127/762 (16%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENP 67
+ V+FP++ YP Q +YM ++ L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEH 67
Query: 68 V---------------------------------------KLIYCTRTVHEMEKTLAELK 88
K+IY +RT ++ + + ELK
Sbjct: 68 QMQMVKMEKADFSGIGGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAMRELK 127
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
+T + A + ++ L SR LC++ V+ + C+ R S
Sbjct: 128 -----RTAY----ANMRSVVLGSRDQLCIHPEVMRELGNSNKTNMCKLRVHS-------- 170
Query: 149 NPNIETCEFFENYEKAASAAVL-PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+TC F E L P + ++DL G++ CPYF +R + + AN +
Sbjct: 171 ----KTCSFQMRVESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELAR-ANKIEL 225
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
++V+ DEAHNI+ +C E SV ++ + +++ I
Sbjct: 226 G-------------------NTIVILDEAHNIEKICEEYASVQIKSSDVAMTIEDITHIR 266
Query: 268 QEIERFKATD-AGRLRAEYN----------RLVEGLALRGNLPNAWLSNPALPSDILKEA 316
Q ++ D AG ++ L A+ + + + P+ ++ E
Sbjct: 267 QVFASGESQDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAVVVDNAVDGTTFPASMMYEL 326
Query: 317 VP------GNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA---SITAHAGIDQ 367
+ GN+ + +L +LVQYL + ++ K G + ++ +I D
Sbjct: 327 LGKANFTYGNV---ASIISLLDKLVQYLLVASQQMSIRKGGTFTLLSDLLTIVFANKEDV 383
Query: 368 KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIP 427
+ + ++H L+ +E A G + +I ++ I
Sbjct: 384 MSKVYASFKVHVLV--------EESKQGHGKQQGAKQQGGWLGKGTIAAATGSSKVAKI- 434
Query: 428 DPVLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LT 484
+ C + ++ + + + +SV++TSGTL+P L P + V++ + +
Sbjct: 435 ---INFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVD 489
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ + ++ G D+ + + + R +P + G+ ++ + IVPDG++ FF SY ++
Sbjct: 490 QSQVYVKIIGTGPDRQQLISNYANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLN 549
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
+ + W SG+ +I K +F+E + + T ++ + +A +GAVF +V RGKV+E
Sbjct: 550 KCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSE 609
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAA 659
G+DF GR VI+ G+PF ++ + YL R+ + ++ DA R
Sbjct: 610 GLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLSGQEWYNLDATRAVN 669
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
Q +GRVIR + DYG ++ D R+ + +L WI HL D
Sbjct: 670 QAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGD 711
>gi|154419164|ref|XP_001582599.1| helicase [Trichomonas vaginalis G3]
gi|121916835|gb|EAY21613.1| helicase, putative [Trichomonas vaginalis G3]
Length = 1428
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 180/748 (24%), Positives = 333/748 (44%), Gaps = 103/748 (13%)
Query: 4 KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK 63
K+ + V FPY+ Y Q M + + + + + L+E PTGTGKT+ALLS +Y
Sbjct: 6 KIMGIDVLFPYEKPYKSQEVVMEKTIKGIASNHNALIESPTGTGKTLALLSASLAYQHVD 65
Query: 64 PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA 123
P+ +IY +RT ++++ ++E K L K+ L+SRK LC+N V
Sbjct: 66 PKLD-SIIYTSRTHTQLKQVISEYKRL----------PYKVQMTVLASRKRLCINDEVRE 114
Query: 124 AENRD----------SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG 173
+ N D +V+ +++ +V A + P T E LP
Sbjct: 115 SPNTDINCYILTHPKTVNGVTQEQCPYFVHAQVEKAPRSLTIE-----------GDLP-- 161
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
+ L++L +GK+ CPY+LA+++ A ++ Y Y LD I S E S+++F
Sbjct: 162 KFDLEELFQYGKRHAACPYYLAKNLKSSAKIIFSPYNYYLD----TIFSSEFLTNSILIF 217
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE-YNRLVEGL 292
DEAHNI+N A +++ + E L+RIN ++ + R + YN +++
Sbjct: 218 DEAHNIENA---ARNIATFKMPFEL----LTRINISAKQIAERKSDRFGVKIYNNMIK-- 268
Query: 293 ALRGNLPNAWLSNPALPSD--ILKEAVPGNIRRAEHFL-HVLRRLVQYL-RGRLETENVE 348
L N++L + + ++ V G A H L H++ V L ++ N E
Sbjct: 269 -----LTNSFLEFMLQQWEYYLKRKQVEGKTHIAYHNLSHIIGPDVSALGHDFVDYSNPE 323
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY 408
VA+ T D L +L + + + F++I +
Sbjct: 324 -------VATPTNSILYDPPELITFASQLGKCLKLITPQKQESFVYI------------F 364
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
G +I F+ +SC D S+ + +S+++ SGTLSP +
Sbjct: 365 VPGENINASSFE------------ISCLDPSVVFEQAGKSAKSIILASGTLSPQQSFESE 412
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPG--VARNYGKLLVEMV 526
L + S ++ D + + G++ +++ FD G + ++G+ ++ +V
Sbjct: 413 LGLPFPIKASVPHVISPDQVK-LYQIVGTNGRRMTSLFDEMEKRGKQILLDFGRGVLSIV 471
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC 586
G++ F SY+ ++++ W +GI ++I + + +F E Q + + +Y+
Sbjct: 472 KNTDGGVLVFMPSYAVREKMMKVWRKAGIAEQIYKERWIFNEEQG-KDMKKVISDYK--- 527
Query: 587 DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK-ILLARLEYLRDTFQIK 645
+C AV F++ +G + EGIDF ++ R V+ FG+P+ + + I+ RL ++ +
Sbjct: 528 NCKGRAVLFAICKGSIGEGIDFSDYHARAVVCFGIPYPPSKEQEIIQKRLFNNKNRPKYN 587
Query: 646 EGDFLTFDALRQAAQCVGRVIRSKADYG-MMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
+ +R Q +GRVIR DYG + +F D+ + + D P W+ ++ +
Sbjct: 588 GKLWYNGQGMRTLFQVLGRVIRHSQDYGALFVFEDRLHPQRD----FPSWMTRNIEQTY- 642
Query: 705 NLSTDMALHIAREFLRKMAQPYDKAGSI 732
+ D A++ F +KM +D I
Sbjct: 643 -KTADEAINDFILFQQKMKSMFDGKQEI 669
>gi|167526369|ref|XP_001747518.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773964|gb|EDQ87598.1| predicted protein [Monosiga brevicollis MX1]
Length = 1029
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 181/749 (24%), Positives = 309/749 (41%), Gaps = 152/749 (20%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
+ KL+ + V FP++ + S CL T S + +
Sbjct: 3 VLKLQGIEVSFPFEPTWSRVSS--------------CLFCEARHT-------SPMPDITV 41
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
+KP+ + ++TV E++ T +Y+ R + L SR LCV+ V
Sbjct: 42 NKPDELRAELLLSQTVKELKNT--------DYRAR---------SAVLGSRDQLCVHPEV 84
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKA-----ASAAVLPPGVYT 176
+ + C+ R N C F++N + A A P
Sbjct: 85 KTISSNAAKTRVCKIRV------------NAHDCSFYQNVDPVFRDVDADLATNPHPALD 132
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
L+DL G+++ CPYFL+R M A+V++ Y YL+D + ++ +VV+FDEA
Sbjct: 133 LEDLVQLGERRHACPYFLSRSMQSGADVILLPYNYLIDKQTRASQGIDLNG-AVVIFDEA 191
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
HNI++ C EA S + L G L+ I+Q + + DA R +RL+
Sbjct: 192 HNIESSCEEAASFDLTSADLAGF---LTEIDQLL---RVADADRPELSEDRLL------- 238
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
+LK+AV ++ R+E +N + ++
Sbjct: 239 ---------------LLKKAVLD---------------LEAALDRIELKNGGFKAKGDYM 268
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTL-------------------------EITDTDE 391
A AGI T E L ++TL + TD
Sbjct: 269 YQFFAEAGISSTTHHDLSELLEQCVMTLLQQQANATGRCYLSKFQDVLKVAFSDAAKTDP 328
Query: 392 -------FLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP 444
++H++ + ++ T +S ++ D+R L L C + A+K
Sbjct: 329 RVLEKFYYVHVEEKANRSS--QKKTSDWSNSMQKLDKRTVR----TLSLWCFSPAFAMKS 382
Query: 445 VF-DRFQSVVITSGTLSPIDLY-PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
+ + +++++TSGTL+P++ + L+ PV+ + + +T + VL G +
Sbjct: 383 LMAEGIKTLILTSGTLAPLNSFKAELMTDFPVMLENPHI-ITGKQVWAGVLPVGPSNARL 441
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG-----ILK 557
+ ++ R+ P G LV IVP G++ FF SY M + W I
Sbjct: 442 ISNYENRNLPAYKNELGNSLVNFSRIVPAGLLVFFPSYGVMASCVEAWQQPSSTGACIWD 501
Query: 558 EIMQHKLVFIETQDVVETTLALDN-YRKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRL 615
+ Q+K V +E ++ E A+ Y K D GA+F +V RGKV+EG+DF GR
Sbjct: 502 RLSQYKTVIVEPREKHEFVAAMHAFYDKIQDPALSGAIFLAVCRGKVSEGLDFANSNGRA 561
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQ-----IKEGDFLTFDALRQAAQCVGRVIRSKA 670
VI+ G+P+ ++ + +Y+ D + + D+ A R Q +GRVIR +
Sbjct: 562 VIITGLPYPAVKEPRVVLKRQYMDDACRRRATTLSGQDWYQMQATRAVNQAIGRVIRHRQ 621
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHL 699
DYG +I AD R++ +R+ LP W+ H+
Sbjct: 622 DYGAIILADSRFADERQRACLPKWLQKHV 650
>gi|350407679|ref|XP_003488158.1| PREDICTED: Fanconi anemia group J protein-like [Bombus impatiens]
Length = 959
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 189/792 (23%), Positives = 331/792 (41%), Gaps = 140/792 (17%)
Query: 18 YPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----------VLSKPENP 67
Y Q + M +L + + +CLLE PTG+GKT+ALL + ++ S N
Sbjct: 217 YSCQVAVMNQLIQGCIKQENCLLESPTGSGKTLALLCGVLAWHDHHVGDCKSTTSHENNG 276
Query: 68 VKL------------------------------------IYCTRTVHEMEKTLAELKLLH 91
L Y TRT ++E+ + EL
Sbjct: 277 EDLPESSSTKCTDYCEDYDEEEDFEDSYEKSKKIKISKIFYGTRTHKQIEQVVREL---- 332
Query: 92 NYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPN 151
R K + I LSSR++ C+ E + C + N
Sbjct: 333 ----RKTSYKHKKMTI-LSSREHTCIQ------ETTKNKTELCND---------LLDTQN 372
Query: 152 IETCEFFENYEKAASA---AVLPPG---VYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+ C F+ K A V G ++ ++DL A GK +G CPYF AR + + A+++
Sbjct: 373 HKGCPFYNESNKKTIATFRGVKSRGLDDIWDIEDLVAIGKNEGLCPYFAARSLAEHADII 432
Query: 206 VYSYQYLLDPKVAGIISKEMQKE---SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRN 262
Y Y++DP I + MQ + V++ DEAHNI+++C E SVS R L
Sbjct: 433 FCPYNYIVDPD----IRESMQLDVTGHVIILDEAHNIEDICREVASVSFREDHLTAVASE 488
Query: 263 LSRINQEIERFKATDA---GRLRAEYNRLVEGLAL----RGNLPNAWLSNPALPSDILKE 315
+ ++ +A D+ G L+ +LV+ L + + + LS+P L E
Sbjct: 489 CESLMKQ----RAADSEIYGTLQTYSLKLVDFLKITVVDKVGYNSDNLSSPYWTGAELLE 544
Query: 316 AVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYE 375
N+ ++ + + + N KE +F + K L
Sbjct: 545 LF--NMNGLNEAMYTM--FLGACNAAIADSNRAKEERRTFQKVLQPVISPTTKKL----- 595
Query: 376 RLHSLMLTLEITDTDEFLHIQTICDF-ATLVGTYTRGFSIIIEP--FDERMPHIPDPVLQ 432
+ LM T+ + + E+++ DF A + T + F E ++ L+
Sbjct: 596 -IEQLMFTIRMITSSEYMN-----DFRACVTETTVKDFKYATENTWLSSKVCTQRARTLK 649
Query: 433 LSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP-- 490
L C + + P+ + +S+++ SGTLSP +F + SF L + P
Sbjct: 650 LLCMNPGVTFAPLARQARSIILASGTLSPT------ASFQSELGTSFAHVLNTGHVIPKE 703
Query: 491 ----MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ + +G +++ + + + G +L+++ VP GI+CFF SY+ M
Sbjct: 704 QVYAICVPQGPNEVKLRANYQSVNSWAFQDELGAVLLDVCESVPHGILCFFSSYNVMHTQ 763
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGR------GAVFFSVA 598
+ W + I +I K +FIE + + + YR+ + G+ GA+F +V
Sbjct: 764 MQRWISNSIWTKITSVKQIFIEPRYGGDLKDIMYEYRQVIEQTSGKRRGKITGALFLAVF 823
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----DFLTFD 653
RGKVAEGIDF + R VI G+P+ ++ +L Y DT +K+G ++ +
Sbjct: 824 RGKVAEGIDFKDNEARCVITVGIPYAVRKDPVIDMKLSY-NDT-NVKKGLLKGSEWYSIQ 881
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH-LNLSTDMAL 712
A R Q +GR +R D+G ++ D+R+ H+ + LP W+ + + + NL ++
Sbjct: 882 AFRALNQALGRCLRHINDWGAVLLVDERFLMHENKENLPKWVKTMWVNQNGYNLRENLKD 941
Query: 713 HIAREFLRKMAQ 724
++++ R+ Q
Sbjct: 942 FVSKQKAREEKQ 953
>gi|145354926|ref|XP_001421725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581963|gb|ABP00019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 749
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 186/760 (24%), Positives = 315/760 (41%), Gaps = 127/760 (16%)
Query: 9 TVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS------ 62
TV FP++ Y Q +M + A+ H LLE PTGTGKT+ LL+ ++V S
Sbjct: 22 TVDFPFE-AYDNQLVFMEKALLAMCRGEHALLESPTGTGKTLCLLASALAFVRSEGRARK 80
Query: 63 ------------------------------------KPENPVKLIYCTRTVHEMEKTLAE 86
+ PV ++Y TRT ++++ + E
Sbjct: 81 RKFREEVRDGRGGAGDADDVAGTSGREFVDDVEKKERTRAPV-IVYATRTHSQVDQVVRE 139
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
LKL + TR A L+SR++ C V A + + R A V+
Sbjct: 140 LKLF-DSTTR---------ATTLASRRHACARDDVRALNGTEQ-----KNRCAKLVQQ-- 182
Query: 147 AENPNIETCEFFENYEKAASAA-----VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
+ C ++A + GV ++DL + K +G CP++LAR
Sbjct: 183 ------QKCGAKVTLDRALQGRDGRFDLFSDGVQDIEDLVSKAKARGPCPFYLARTKCAE 236
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
A ++ Y YLLD V + + +V++ DEAHN+++ +++S S+ L A +
Sbjct: 237 AEIIFMPYNYLLDESVRKGLEIAWEN-AVIIVDEAHNLESSASDSMSYSLTAAKLAKAIK 295
Query: 262 NLSR-----INQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEA 316
R + E + DA + E +++ G+ ++ L I +EA
Sbjct: 296 ESERAYETKLTLEDTSGEGIDAAAFKGEDFKMLTGVLVQ---------LEGLLDSICREA 346
Query: 317 VPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYER 376
+ E L E+ G +F+ I A I T +
Sbjct: 347 AKAPNAKHEGGLG------------------ERIGDGAFIYVILAELNITADTYEHITKL 388
Query: 377 LHSLMLTLEITD------TDEFLHIQTICDFAT--LVGTYTRGFSIIIEPFDERMPHI-- 426
+ S T+++ T + I +F V Y + F + P E+
Sbjct: 389 IKSASRTVQLGSDFMAQPTQNETPLMEIGNFIERIFVHRYEQYFVTRLGPDMEKFKTSNR 448
Query: 427 --PDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL 483
P L C L +K + D+ + ++ SGTLSP++ + L V +
Sbjct: 449 ARAGPTLSYWCFFPGLCLKALIDKGVGTFLLASGTLSPMESFASELALDFPVRLENPHVI 508
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
R+ + V+T G + +++ F R G +++ IVPDG++ FF SY M
Sbjct: 509 KRNQVWGGVVTHGPNNGVLNSSFRFRDTREYKTEIGSVILSTARIVPDGLLVFFPSYGVM 568
Query: 544 DEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSVARGK 601
+ W +G+ ++ +K +E + E D+Y KA D RGA FF+V RGK
Sbjct: 569 HSCVNHWRSTGLWNQLETNKTCLVEPSNADEFHACYDSYNKALEEDSRRGAAFFAVCRGK 628
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG------DFLTFDAL 655
++EGIDF R VI+ G+P+ +++ + YL D + G ++ + A+
Sbjct: 629 LSEGIDFADKACRGVILTGIPYAGAKDPLVMHKRTYL-DKRKADNGGAYSGNEWYSQTAM 687
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R Q +GRVIR K D+G +I AD+R++ + R++L W+
Sbjct: 688 RAVNQALGRVIRHKDDFGAVILADERFANENARNQLSLWL 727
>gi|221060536|ref|XP_002260913.1| DNA-repair helicase [Plasmodium knowlesi strain H]
gi|193810987|emb|CAQ42885.1| DNA-repair helicase, putative [Plasmodium knowlesi strain H]
Length = 1106
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 194/835 (23%), Positives = 340/835 (40%), Gaps = 196/835 (23%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL- 61
+ + DV VYFPY+ +Y QY+YML + AL K + +LE PTGTGKT+ LL SY++
Sbjct: 21 YTINDVEVYFPYE-LYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVD 79
Query: 62 -------------------------------------SKPENPV-KLIYCTRTVHEMEKT 83
+ P N K+IY +RT ++++
Sbjct: 80 VLEKKGAFSENINITENKKNISLDFKENENSRSSPPKASPANDFPKIIYASRTHSQLKQV 139
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
+ ELK ++ + K+L L SR LCV++ + ++ C++
Sbjct: 140 IKELKNVYFIKN---NEKYKLLTTILGSRDQLCVHN-INYNYKGTMLNNMCKR------- 188
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL---RAFGKQQGWCPYFLARHMVQ 200
A +N + K +P V TL ++ + G+ +CP++ R +
Sbjct: 189 --ARKNGECMYHNGLKYLYKLKHLFTIPMDVETLSEIGKGNSVGQNIHFCPFYATREIQN 246
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGAT 260
+V++ Y YL + I+ ++ S+++ DE H
Sbjct: 247 ECHVILLPYNYLFEESTRKILKLNLE-NSIIIIDEGH----------------------- 282
Query: 261 RNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGN 320
N+ + +E FK D+ + N ++G+ A L+ D+ KE
Sbjct: 283 -NIETVAEEAVSFKIKDS-----DLNLFLDGIK-------ATLTVLDKVKDVDKEMRE-- 327
Query: 321 IRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAG-----IDQKT----LR 371
R + L L R + L LE E +E G + G I QK +
Sbjct: 328 -RISVDELFKLNRSITALISWLENERLEISGKNKIKEKHKTYEGKEIFDIFQKNNINITK 386
Query: 372 FCYERLHSL---MLTLEITDTDEF----LHIQTICDFATLVGTYTRGFSII--------I 416
+E+ H+L M+ L ++F + ++ I + + + FSI+ I
Sbjct: 387 DNFEKFHTLLTCMVELLNRYINDFKITAMDVKNINKYIATIDNIRKSFSILFSDVVRNCI 446
Query: 417 EPF-----DERMPHIP------------------------------DPVLQLSCHDASLA 441
E F +E++P+ + L C A+ +
Sbjct: 447 EYFQLFINEEKVPYTECADVSKVYDNMKKFTKSKTKIVYDKYNYTMSKNISLLCFSATAS 506
Query: 442 VKPVF-DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLT 494
+ + ++ S+++TSGTLSPI+ + + L+ + SFK L D + +T
Sbjct: 507 LCGILKEKVNSIIVTSGTLSPIEPFSKQLSGNYF---SFKHILENDHVIKSHQLFVGCMT 563
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG 554
++Q+ +ST ++ RS+ + G + +++ +P G++ FF SYS M E + W
Sbjct: 564 HYNNQILLST-YENRSNDNYIQALGNCIFDLIICIPYGVLIFFSSYSSMTETVNAWKKFK 622
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYG 613
I ++I +K +F+E E L Y R GA+ V RGK++EGIDF
Sbjct: 623 IFEKINSYKTIFVEPNKAAELKDILQQYEYIIKKKRKGAILMGVCRGKISEGIDFKDDCC 682
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQ---------------------------IKE 646
R VI+ G+P+ ++ + E+L D F+ I +
Sbjct: 683 RGVIICGLPYGNVYDSKIIFKKEFL-DNFKYEFSPPNDILGGDNGAGALSNNTTLSNISK 741
Query: 647 GD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
G+ + +A+R Q +GRVIR K DYG + F D R+S + + ++ W+ +H R
Sbjct: 742 GNKWYNEEAMRSINQSIGRVIRHKNDYGSIFFLDSRFSNNQRIKEISKWVRTHFR 796
>gi|55925522|ref|NP_001007320.1| probable ATP-dependent RNA helicase DDX11 [Danio rerio]
gi|55250690|gb|AAH85645.1| Zgc:92172 [Danio rerio]
Length = 890
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 181/713 (25%), Positives = 293/713 (41%), Gaps = 92/713 (12%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E+ K+ YC+RT ++ + +H Q G A +++ +G SR+NLC+N V+
Sbjct: 203 EHVTKIYYCSRTHSQL------AQFVHEVQKSPYGDAVRLVNLG--SRQNLCINPEVVRL 254
Query: 125 ENRDSVDAAC---------RKRTASWVRALAAENPNIETCEF--FENYEKAASAAVLPPG 173
N ++ C +++ AS + + TC F FEN ++
Sbjct: 255 GNVQMMNERCLEMQKNKHEKRQKASDSESKRSRGLAKATCVFSRFENLMAMKDEVLVK-- 312
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKEMQKESV 230
V ++ L G++ CPY+ R + A VVV YQ LL K +GI K+ +
Sbjct: 313 VRDVEQLIQHGRETHTCPYYSTRMSIPAAQVVVLPYQSLLHASTRKASGI----KLKDQI 368
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE---YNR 287
V+ DEAHN+ + S + L R S+++Q ER+++ RL+A+ Y +
Sbjct: 369 VIIDEAHNLMDTISAIHSAEISGGQL---CRAHSQLSQYCERYRS----RLKAKNLMYIK 421
Query: 288 ----LVEGLALR-----GNLPNAWLSNPALP----SDILKEAVPGNIRRAEHFLHVLRRL 334
++EGL G PN +D L +A NI + V +
Sbjct: 422 QILFVLEGLVRTLGGKVGQNPNTQSCQTGSELLTINDFLFKAQVDNI----NLFKVQKYF 477
Query: 335 VQYLRGRLETENVEK-EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFL 393
+ + R EK EG + I H+ K R E L + TL+ TD
Sbjct: 478 EKSMISRKLCGFAEKYEG-----SGINTHSSSKNKENRRT-EGLWRFLQTLQSKPTDVSE 531
Query: 394 HIQTICDFATLVGTYTRGFSIIIEPFD---------ERMPHIPDPVLQLSCHDASLAVKP 444
+ D + S + + +R + L+ +A++
Sbjct: 532 QQMAVEDKPIMASPMMLAESFLFALTNANKDGRIVIQRQACVAQSSLKFLLLNAAVHFAQ 591
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR------SFKMSLTRDCICPMVLTRGSD 498
+ ++V+I GT+ P+ + L F V+ S + + I P+VL G
Sbjct: 592 ILQECRAVIIAGGTMQPVADFKEQLLFSAGVTEERILEFSCGHVIPPENILPIVLCAGPS 651
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ F R P + G++L + +IVP G+VCFF SY Y I+ W +GIL+
Sbjct: 652 GQQLEFTFQTRDSPQMMEETGRVLSNLCNIVPGGVVCFFPSYEYEKRILGHWESTGILQR 711
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K C GA+ FSV GK++EGI+F
Sbjct: 712 LQSKKKIFQEPKKASQVEQVLSEYSKCIQRCSNIGGGQTGALLFSVVGGKMSEGINFSDD 771
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD-----FLTFDALRQAAQCVGRVI 666
GR ++M G+P+ S L ++ YL G + ++ Q +GR I
Sbjct: 772 LGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPHVAGKSPGKALVESLCMKAVNQSIGRAI 831
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 719
R + DY ++ D RY+R KLP WI S H + + A AR F
Sbjct: 832 RHRGDYACIVLCDHRYARTGTLQKLPEWIRS---STHTHATFGPAFASARRFF 881
>gi|341883785|gb|EGT39720.1| hypothetical protein CAEBREN_25454 [Caenorhabditis brenneri]
Length = 810
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 199/811 (24%), Positives = 344/811 (42%), Gaps = 164/811 (20%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV----LSK 63
V V FP++ Y Q +M + LD+K LE PTGTGKT++LL ++V +K
Sbjct: 20 VCVKFPFEP-YECQRIFMKNVIDVLDSKLDAALESPTGTGKTLSLLCSTLAWVNREKETK 78
Query: 64 P----------------ENPVK------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
P E+ +K + Y +RT ++E+ + EL +T +
Sbjct: 79 PLDFATWQTSGAGGAGTEDKLKKTFIPTIFYASRTHSQLEQVVHELN-----RTEYKWVK 133
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
IL SR++ C+N +V + + R A R L ++ +C + +
Sbjct: 134 TTILG----SREHFCINQKVKKIKESN--------RQAHVCRGLVSKR----SCHYHNKF 177
Query: 162 EKAAS---AAVLPPG-VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
+ + +L G ++D G Q CPY+++R + A +++ Y Y++DPK+
Sbjct: 178 DACTTDKMTEILDTGEAMDIEDFVKLGTQNSICPYYMSRQRSETAELILLPYNYIIDPKM 237
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI-----NQE--- 269
++ K S+V+FDEAHN++++C S + ++ L ++ ++E
Sbjct: 238 RRRYKLDL-KNSIVIFDEAHNLESICESNASTELSSTSIALCIEELKKVLALLVDEEETA 296
Query: 270 ----------------------IERFKATD-------AGRLRAEYNRLVEGLALRGNLPN 300
IE K D L E ++L E L+ N+P
Sbjct: 297 RTEADGCMEAFGSQKIDLTKRLIENLKTEDLMALLEKVFLLEEEIDKLFESDKLK-NIPP 355
Query: 301 AWLSNPALPSDILKEAVP-----GNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGP--- 352
L A ++L E + GN E F+ VLR + YL + E ++ ++G
Sbjct: 356 --LDGKASDGEVLLEVLARAGFDGN--SVERFVDVLRDAISYLLSKNEEVSLTEKGDGME 411
Query: 353 --VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD----EFLHIQTICDFATLVG 406
F+ SI + H+ + + D + + ++T+ + L
Sbjct: 412 TLADFLLSIYS---------------THAQEIAAAVGDESVKLVDRIDLKTVANNCKLYI 456
Query: 407 TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPID-- 463
G + ++ C AS++++ + R ++V++ SGTLSPI
Sbjct: 457 KKEEGSGKL--------------TIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAF 502
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLV 523
Y LNF ++ + +L + + ++TRG + ++ F R + + G+ L+
Sbjct: 503 TYNMGLNFGSILEN--EHALKQVPVLTSIVTRGK-RGGLTGSFQNRKNIDYVTDVGESLI 559
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATW------NDS--GILKEIMQHKLVFIETQDVVET 575
++ P GI+ FF SYS MDE++ATW NDS + + + + K V +E + E
Sbjct: 560 RVMESTPQGILVFFSSYSQMDELVATWKTTKRPNDSLETLWERMEKSKKVVVEPRAKEEL 619
Query: 576 TLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QYTLSK 629
Y + GA +V RGKV+EGIDF R VI+ G+P+ + L K
Sbjct: 620 AAVRLRYTQGVSEPHGAALLAVCRGKVSEGIDFCDAESRAVIIVGIPYPPIHDERVVLKK 679
Query: 630 ILLARLEYLRDTFQIKEG--DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 687
+ L L +D ++ D+ +A R Q +GRV+R K D+G ++ D RY+ K
Sbjct: 680 MYLDDLMGRKDKTHERQSSQDWYQMEAFRAVNQAIGRVLRHKNDFGTVVLLDTRYASA-K 738
Query: 688 RSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
P W+ S + S AL AR F
Sbjct: 739 PEMFPKWLRSTISRID---SDGCALRTARFF 766
>gi|440633923|gb|ELR03842.1| hypothetical protein GMDG_01371 [Geomyces destructans 20631-21]
Length = 874
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 173/680 (25%), Positives = 291/680 (42%), Gaps = 84/680 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-------LSSRKNLCVNSR 120
+K+ YC+RT ++ + + EL+ + PA +G L SRKNLC+N
Sbjct: 220 IKIFYCSRTHSQLTQFINELRRVKIPPALQPEPAPVKPLLGEEFKHLTLGSRKNLCINPS 279
Query: 121 VLAAENRDSVDAACR--KRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V + +++ C +++ + PN + ++ A A + ++
Sbjct: 280 VNKLRSATAINERCMELQQSGTATDKKCCFLPNQQNQPLVNDFRDHALATI-----RDIE 334
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
+L GK+ CPY+ +R ++ A +V Y LL + + K VV+ DEAHN
Sbjct: 335 ELGDLGKEMKICPYYASRSAIKPAEIVTLPYPLLLQKSAREALGVSV-KGHVVIVDEAHN 393
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGLA-- 293
+ + ++V +L R+ ++I Q ++RF+ G+ R A+ RL++ LA
Sbjct: 394 LMDAIAGIYGITV---SLSQLKRSRAQIGQYLQRFRNKLKGKNRVYVAQVVRLIDSLAQF 450
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
L G + PS++L I L +L++YL+ VE G +
Sbjct: 451 LDGKVGQKG-EMVVEPSELLVGKGVDQIN--------LYKLMRYLQDSKLARKVE--GYI 499
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
F A G R + TL+ HIQ++ L G
Sbjct: 500 IFAEGAAADNGNPAAKARKPDATSEAATPTLQ--------HIQSL--LVALTNPSKEG-- 547
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFH 472
F + P D VL+ D + + + ++V++ GT+SP+ D LL++
Sbjct: 548 ---RLFYAKDPETSDIVLKYMLLDPTHHFQEIVSEARAVILAGGTMSPMADYTSHLLSYL 604
Query: 473 P---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD---PGVARNYGKLLVEMV 526
P + + S + ++ + L++G P F R+ + G+ ++ +
Sbjct: 605 PAERITTLSCGHVIPKENLLAWTLSKGPTGKPFEFTFSKRAGREGEEMIDELGRAVLNIC 664
Query: 527 SIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHKLVFIETQDV-VETTLAL 579
+IVPDGIV FF SYSY+D +I W I + + + K +F E +D V L
Sbjct: 665 TIVPDGIVVFFPSYSYLDTVIKRWEVILEPGRPSIWERLGKRKALFREAKDAKVGAEYVL 724
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
Y KA D +G + SV GK++EGI+F GR V++ G+P+ +S A++ Y+
Sbjct: 725 TEYAKAIDGNQGGLLLSVVGGKMSEGINFSDRLGRCVVIVGLPYPNIMSGEWKAKMSYI- 783
Query: 640 DTFQIK------EG--------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
+T I+ EG +F +R Q VGR IR K D+ +I D
Sbjct: 784 ETATIERLEAAGEGTTSSRQAAGKAEAREFYENACMRAVNQSVGRAIRHKNDFASIIIVD 843
Query: 680 KRYSRHDKRSKLPGWILSHL 699
R+ + R KLPGWI L
Sbjct: 844 GRFGKEGIRRKLPGWIRDGL 863
>gi|391868700|gb|EIT77910.1| helicase of the DEAD superfamily [Aspergillus oryzae 3.042]
Length = 734
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 179/749 (23%), Positives = 308/749 (41%), Gaps = 122/749 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTG--TGKTIALLSLITSYVLSKPENP- 67
Y PYD Q +M L ++ + E PTG G + L L+ + +P
Sbjct: 12 YSPYDI----QLQFMRALYSCIEKGKVAVFESPTGKLAGLSTGTLELLKRFQHKSSAHPR 67
Query: 68 ---------VKLIYCTRTVHEMEKTLAELKLLHN------------YQTRHLGPAAKILA 106
+K++YC+RT ++ + +EL+ ++ T L + L+
Sbjct: 68 QDEDYGDEDIKILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTDGLQEGVRHLS 127
Query: 107 IGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAAS 166
+G SRKNLC+N RV +N ++ C V AAE + C F + E A
Sbjct: 128 LG--SRKNLCINPRVSYLDNVTAISERCLDMQQPGV---AAE----QRCPFLPSNENEAQ 178
Query: 167 AAVLPPGVYT----LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIIS 222
V ++D+ GK G CPY+ +R + + + +V Y LL +
Sbjct: 179 VLQFRDHVLATVKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALD 238
Query: 223 KEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
+ K VVV DEAHN+ + SV++ TL +L ++ +FK G+ R
Sbjct: 239 LSI-KGHVVVIDEAHNLMDAISNIHSVTI---TLSELQTSLFQLTTYARKFKTRLKGKNR 294
Query: 283 ---AEYNRLVEGLA--LRGNLPNAWL-SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQ 336
A+ RLV + L+ L + P PSD++ I +L +
Sbjct: 295 NYIAQVIRLVTSITDHLKTILETSQAPEGPVQPSDLMSGKGVDQINPY--------KLCR 346
Query: 337 YLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL-EITDTDEFLHI 395
YLR E++ K S + A D+K + S +L L ++ + +I
Sbjct: 347 YLR---ESKLARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLMNLSAEGKLFYI 403
Query: 396 QTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVIT 455
+ D ++++P ++ + + D ++V++
Sbjct: 404 KAQGDIQLKY--------MLLDPMNQ--------------------FREIVDDARAVILA 435
Query: 456 SGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMR 509
GT+SP+ Y + + P V S + + + P VL +G F+ R
Sbjct: 436 GGTMSPMTDY--IHHLFPYVPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETR 493
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN-------DSGILKEIMQH 562
+ + G+ + + ++PDG+V FF SY Y+ ++++ W + + I
Sbjct: 494 DSERMIVDLGRTMAALCQVIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGK 553
Query: 563 KLVFIETQDV-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
K + E++DV + T L Y GRGA+ SV GK++EGI+F GR V++ G+
Sbjct: 554 KTILHESRDVTISTEELLQEYASIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGL 613
Query: 622 PFQYTLSKILLARLEYL-RDTFQIKEG--------------DFLTFDALRQAAQCVGRVI 666
PF S + A++ Y+ + ++ G DF +R QC+GR I
Sbjct: 614 PFPNIRSAVWQAKIHYVEQKAYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAI 673
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R + DY ++ D+RY + + KLP WI
Sbjct: 674 RHRNDYAAIVLMDRRYDKPAIQGKLPAWI 702
>gi|19115889|ref|NP_594977.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74581973|sp|O14147.1|CHL1_SCHPO RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|2408082|emb|CAB16287.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe]
Length = 844
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 158/681 (23%), Positives = 299/681 (43%), Gaps = 105/681 (15%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
KP K+ + +RT ++++ + E+K L+N QT + I + L+SRKNLC+N+ V
Sbjct: 207 KPPIVQKIYFTSRTHSQLQQLVQEIKKLNN-QTF----STPIRVVSLASRKNLCINNEVR 261
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+++ C + S A + P ++ ++ A A ++ +++L
Sbjct: 262 KLRPTSALNEKCIELQGS-----AHKCPFLQDNTQLWDFRDEALAEIM-----DIEELVE 311
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN-IDN 241
G++ CPY+ R V A +V Y LL ++ + K+++ + DEAHN ID
Sbjct: 312 LGQRLKVCPYYGTREAVDSAQIVTLPYPLLLQESARNALNLTL-KDNICIIDEAHNLIDA 370
Query: 242 VC-IEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
+C + + S+S R+ + +++ Q RF+ G R +L++
Sbjct: 371 ICSMHSSSISFRQVCIAE-----TQLQQYFLRFEKRLNGNNRMHIKQLIK---------- 415
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
V+ L + LET K V V S+
Sbjct: 416 -----------------------------VVYNLKSFFLNCLETNTNSK---VINVDSLL 443
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLH------IQTICD-----FATLVGTYT 409
G DQ L E L+ L ++ +++H ++++ D F+ G
Sbjct: 444 VSNGADQINLHHLSEYLNVSKLARKVDGYTKYMHSLGTQELESLNDLRSERFSNGNGYEE 503
Query: 410 RGFSIIIEPFDERMPHIPDPV----------------LQLSCHDASLAVKPVFDRFQSVV 453
++ ++ + + +I +P L+ D S V+ + ++ +SV
Sbjct: 504 DPYTPVLMQLESFLLNIANPAPEGKLFYEKQTGDNPYLKYLLLDPSKHVEILTEQCRSVN 563
Query: 454 ITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR----DCICPMVLTRGSDQLPVSTKFDMR 509
+ GT+SPID + LL F SR S + I +++++G +P +
Sbjct: 564 LAGGTMSPIDDFITLL-FSDEQSRILPFSCDHIVPPENITTILVSQGPAGVPFEFTHKRK 622
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
D + ++ G+ +SI+PDG+V FF S++++ + + W +GI + K +FIE+
Sbjct: 623 DDENLLKDLGRTFQNFISIIPDGVVVFFPSFAFLQQAVKVWEMNGITNRLNAKKPLFIES 682
Query: 570 QDVVETTL-ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+D + L ++Y+++ D G + FSV G+++EGI+F GR V++ G+PF +
Sbjct: 683 KDFGDNPLDTFEHYKQSVDAGLSGMLFSVIGGRLSEGINFSDKLGRAVMVVGMPFPNSQD 742
Query: 629 KILLARLEYLRDTFQIK-------EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
A++ Y+ + + K +F +R Q +GR IR + DY +I D R
Sbjct: 743 VEWQAKVSYVEEKAKEKGINAKQASQEFYENTCMRAVNQSIGRAIRHRDDYASIILLDSR 802
Query: 682 YSRHDKRSKLPGWILSHLRDA 702
Y+R + KLP W+ ++ +
Sbjct: 803 YNRSSIQRKLPNWLSKNIHSS 823
>gi|240254129|ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1175
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 198/806 (24%), Positives = 323/806 (40%), Gaps = 173/806 (21%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDA---KGHC--LLEMPTGTGKTIALLSLI 56
++++ + V FPY Y Q ++M + LD GHC LLE PTGTGK+++LL +
Sbjct: 26 VYQIGGLQVEFPY-QPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSV 84
Query: 57 ----------------------------------------------TSYVLSKPENPVK- 69
S + K E K
Sbjct: 85 LAWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKAETATKK 144
Query: 70 ------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA 123
+ Y +RT ++ + + E + +T + P A L+SRK+ C N VL
Sbjct: 145 RTKIPTIYYASRTHSQITQVIREYR-----KTGYRVPMAV-----LASRKHYCTNRHVLG 194
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP----GVYTLQD 179
+D+VD CR L + NI+ C F+N K S L P V+ ++D
Sbjct: 195 ---KDNVDDECR--------LLLKDKANIQ-CSEFKNVNKITSHPSLQPRGHNEVHDIED 242
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L GK CPYF + M + A +V Y Y+++P + + ++ K ++++FDEAHN+
Sbjct: 243 LVKVGKNVRGCPYFASWSMAENAQLVFCPYSYIVNPVIRAGVEVDL-KGAIIIFDEAHNM 301
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATD----------AGRLRAEYNRLV 289
+++ EA S+++ TL ++ E+E+ L + R
Sbjct: 302 EDIAREAGSINLEEDTL-------FKLQNELEQMSVAQPMIYQPLCEVVEGLISWIGRKK 354
Query: 290 EGLALRG--NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
+ LA R + ++W + AL +E NI R E F +L + +R E E
Sbjct: 355 DSLAKRDFQHYFSSWTGDKAL-----RELEESNITR-ECFPILLECFTKAIRTSKEAEME 408
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
+S ++ +T T F H L D L +Q GT
Sbjct: 409 SDMLYLSGISVLTLEELFSSLTYFFSRNGSHIL---------DYQLGLQRSTKRGDPSGT 459
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
+T FS L C + ++ K + D SV++TSGTLSP++ +
Sbjct: 460 WTHTFS-------------------LWCMNPAVVFKDLADISLSVILTSGTLSPMNSFSS 500
Query: 468 LLNFHPVVSRSFKMSLTRDC-ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMV 526
L S + + + ++ G P++ + GK L E+
Sbjct: 501 ELGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKTADAYSFQDALGKSLEEIC 560
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE----TQDVVETTLA---- 578
+IVP G + FF SY M+++ W ++ + K +F+E QD ++ L
Sbjct: 561 TIVPGGSLVFFPSYKLMEKLCMRWRETEQWSRLCLKKDLFVEPRGGAQDEFDSVLKGYYD 620
Query: 579 --------LDNYRKACDCG-----------RGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
+ R+A G +GA F +V RGKV+EGIDF R VI+
Sbjct: 621 SIRGKNKIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDFADDNARAVIIV 680
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKE-----GDFLTFDALRQAAQCVGRVIRSKADYGM 674
G+PF L I + + DT++ + ++ A R Q GR IR + DYG
Sbjct: 681 GIPFP-NLHDIQVGLKKKYNDTYKSSKSLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGA 739
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLR 700
+IF D+RY R+ + W+ ++
Sbjct: 740 IIFLDERYKEQRNRASISKWLRQSIK 765
>gi|302889483|ref|XP_003043627.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724544|gb|EEU37914.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 863
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 174/692 (25%), Positives = 289/692 (41%), Gaps = 105/692 (15%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK-------LLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
E +K+ Y +RT ++ + + EL+ L + + + LSSR+ LC+
Sbjct: 202 EEQIKIYYTSRTHSQLSQFITELRRPTFPPSLPTSLAKDEESKTEAVKLVPLSSRQRLCI 261
Query: 118 NSRVLAAENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG 173
N +V + +++ C + ++ + E+ ET +F + ++ A LP
Sbjct: 262 NPQVSRLGSVQAINDRCAELQKPKSGKKCPFVPKEDLLSETHQF-----RDSALATLP-- 314
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++DL GK CPY+ +R + A ++ Y LL + +++ SVV+
Sbjct: 315 --DIEDLHHLGKSLSVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEG-SVVII 371
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLS----RINQEIERFKATDAGRLRAEYNRLV 289
DEAHNI + + +R L L R ++++ + GR+ R++
Sbjct: 372 DEAHNIMDAVANVHAAEIRLSDLRRGRGMLGVYVKRFGKKLKGVNRVNVGRV----GRVI 427
Query: 290 EGLA--LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
EGL+ + G L P+D+ + P I + F L+QY+
Sbjct: 428 EGLSEWMDGALKFKAKHGIVDPNDLTR---PKGIDQINMF-----ELIQYI--------- 470
Query: 348 EKEGPVSF-VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
+E ++F + S +H ++ T T LH T+ F +
Sbjct: 471 -QESKLAFKIESYASHVENEEAP-------------TKTPKSTTPVLH--TLVSFLVALT 514
Query: 407 TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID--- 463
+ I + P I L LS + A + ++VV+ GT+SP D
Sbjct: 515 NLSSEGRIFYQKIKGGAPDIQLSYLLLS---PTHAFSSIASSARAVVLAGGTMSPFDDYK 571
Query: 464 --LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP-VSTKFDMRSDPGVARNYGK 520
L+P L V + S + + +C L +P F RSDP + G
Sbjct: 572 DHLFPSL-EPEKVTTLSCGHVIPPENLCVWTLASSRPGMPPFEFSFQKRSDPEMITQLGL 630
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHKLVFIETQDVVE 574
++ + S+VPDG+V FF SY Y+DE++A W N I + + K +F E++
Sbjct: 631 AILNLCSLVPDGVVIFFPSYGYLDEVVAAWQKSHGANAQPIWERLATRKALFKESKGASS 690
Query: 575 TTLALDNYRKACDC----GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
+ L Y A G+GA+ SV GK++EGI+F GR VI+ G+P+ S
Sbjct: 691 DEI-LQEYTNAIQGEGSNGKGALLLSVVGGKMSEGINFSDRLGRCVIVIGLPYPNIASPD 749
Query: 631 LLARLEYLRDTFQ---IKEG---------------DFLTFDALRQAAQCVGRVIRSKADY 672
A++EY+ T Q I +G DF +R Q +GR IR + DY
Sbjct: 750 WKAKIEYIETTTQTNLITQGIPKEEATSRGKQAARDFYENACMRAVNQSIGRAIRHRGDY 809
Query: 673 GMMIFADKRYSRHDKRSKLPGWILSHL-RDAH 703
++ D+RY R KLPGWI L D+H
Sbjct: 810 AAIVLVDRRYGTDRIRGKLPGWIRGGLVGDSH 841
>gi|71994594|ref|NP_001022900.1| Protein Y50D7A.11 [Caenorhabditis elegans]
gi|351059426|emb|CCD73798.1| Protein Y50D7A.11 [Caenorhabditis elegans]
Length = 197
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 129/184 (70%), Gaps = 4/184 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + V FPYD +YPEQ YM E+K+ALDA+GH LLEMP+GTGKT++LLSL+ +Y+
Sbjct: 1 MQLDIDGLKVLFPYDYVYPEQVLYMKEVKKALDARGHGLLEMPSGTGKTVSLLSLVLAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-PAAKILAIGLSSRKNLCVNS 119
+S P+ KL+YC+RT+ E+EK + E+K+L++Y + G P AKI + +S+RKNLCVN
Sbjct: 61 ISYPDKLDKLVYCSRTIPEIEKCVEEMKVLYDYWEKETGQPVAKI-TVAMSARKNLCVNE 119
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
V A ++VD+AC+K TAS R AE+P +E C++FEN+E A + + GV+ L
Sbjct: 120 PVAALRFGNTVDSACQKLTASSARQKRAEDPTLEACDYFENFE--AKSVPMQNGVWNLVK 177
Query: 180 LRAF 183
+ F
Sbjct: 178 ICEF 181
>gi|348685651|gb|EGZ25466.1| hypothetical protein PHYSODRAFT_485995 [Phytophthora sojae]
Length = 1080
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 190/764 (24%), Positives = 318/764 (41%), Gaps = 141/764 (18%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL-------------- 53
+ V FP+ Y Q YM ++ AL +K + +LE PTGTGKT+ LL
Sbjct: 9 IPVEFPFPP-YDSQLVYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAWRRQLQKTL 67
Query: 54 ---SLITSYVLSK-------------------PENPVKLIYCTRTVHEMEKTLAELKLLH 91
++ TS + P+ P ++IY +RT ++++ + ELK
Sbjct: 68 GKSAMATSSAAQQRPGASLAYEGYGSDGESDAPQLP-RIIYSSRTHSQLKQVVQELK--- 123
Query: 92 NYQTRHLGPAAKILAIGLSSRKNLCVN---SRVLAAENRDSVDAACRKRTASWVRALAAE 148
N R P +L SR++LCVN S++ + + C+ R +
Sbjct: 124 NTSYR---PNVAVLG----SREHLCVNEKVSKLRGTRQNLACRSTCKDRRCMYKLG---- 172
Query: 149 NPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
F+ Y K + P + +++L K++ CP+FL R+M+ A ++
Sbjct: 173 ---------FDAYAKRSKKQAQP--IMDIEELVTTMKEKTICPFFLTRNMLPEAEIIFVP 221
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG---------- 258
Y YL+DP I ++ S+++FDEAHN++++ EA S ++ + G
Sbjct: 222 YNYLIDPLARRSIGISIEN-SILIFDEAHNVESIASEAASYALSSNDISGCISEVDTFIR 280
Query: 259 ATRNLSRINQEIERFKATDAGRLRA---EYNRLVEGLALRGNLPNAWLSNPALPSDILKE 315
A +N S Q LRA E N+ + G L + + P E
Sbjct: 281 ALQNNSVQLQAGSNLTMESTQTLRALFMEINKGLNGFPLSSS---GGFTKPGQYIFEFFE 337
Query: 316 AVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYE 375
N L+++ +++ AH G D + +
Sbjct: 338 QFNVNFETCPLVLNMIEEIIE-----------------------VAHGGDDSQRAASKLD 374
Query: 376 RLHSLMLTLEITDTDEF-------LHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPD 428
+ S + T+ + +HIQ + + + G G R
Sbjct: 375 TMLSFLGTIFRSKEQHLQAAKNYRVHIQEVRERPSNAGRLFNG---------GRNKKTTT 425
Query: 429 PVLQLSCHDASLAVKPVF-DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC 487
V C +A + + + +V++TSGTLSP+D + L V + D
Sbjct: 426 RVFNYWCFHPGVAFREICANNVHNVILTSGTLSPLDTTVKELGIDFPVRLENNHVVDADQ 485
Query: 488 ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
+ V+ G +++ ++ RS G +V +VP G++ FF SYS ++E I
Sbjct: 486 VWVGVVGTGVTGKRLNSSYNFRSTETYLLELGNTIVNFTRLVPHGLLVFFPSYSILEESI 545
Query: 548 ATWNDSG-------ILKEIMQHKLVFIETQDVVETTLALDNYRKA-CDCGRGAVFFSVAR 599
W I I+Q K F+E + + +D Y +A D +GAVFF+V R
Sbjct: 546 DKWKRPAAGESALSIWDRIVQQKQTFVEPRGRADFKAVVDEYHQAITDNPKGAVFFAVCR 605
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLS-KILLARLEYLRDTFQIKEGDF-LTFDA--L 655
GKV+EGIDF GR V++ G+PF T KI+L + + D + G+ LT +A +
Sbjct: 606 GKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKK--SILDEAMVPPGELKLTGNAWYI 663
Query: 656 RQAA----QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+QA+ Q +GRVIR + DYG +I D+R+ ++ L W+
Sbjct: 664 QQASRAVNQAIGRVIRHRHDYGAIILLDERFVLKQQQECLSKWL 707
>gi|225685122|gb|EEH23406.1| CHL1 helicase [Paracoccidioides brasiliensis Pb03]
Length = 844
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 171/723 (23%), Positives = 306/723 (42%), Gaps = 119/723 (16%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLH-------------------NYQTRHLGPAAKIL 105
EN V++ YC+RT ++ + EL+ ++ + LG K L
Sbjct: 159 ENEVQVFYCSRTHSQLTQFAHELRRVNLPPSIPPEVDDDKAAADAVSSGVDSLGETLKHL 218
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
++G SR LC+N +V A N +++ C + E P C F N E
Sbjct: 219 SLG--SRNTLCINPKVRALGNPTAINERC-------LEIQRPETPAEHKCSFVPNKENEV 269
Query: 166 SAAVLP----PGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
V ++D+ G + G CPY+ AR +V+++ ++ Y LL +
Sbjct: 270 LVNDFRDHTLAKVLDIEDIGKIGSKIGVCPYYAARSIVKYSEIITLPYPLLLQRSAREAL 329
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
+ + K VV+ DEAHN+ + SVSV L+ A L ++ ++K G
Sbjct: 330 NISL-KHHVVIIDEAHNLMDAISNIHSVSVSLSQLKLA---LYQLTTYARKYKTRLNGSN 385
Query: 282 R---AEYNRLVEGLA------LRGNLPNAWLSNPALPSDIL--KEAVPGNIRRAEHFLHV 330
R + RLV L+ L N P + PSDI+ K N + +LH
Sbjct: 386 RVYVTQVIRLVNSLSEYLTRVLERNRPAEGV---LRPSDIMTGKGVDQINPHKLSRYLHK 442
Query: 331 LRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
+L + + G +E + E +G A + Q++ ++ S +L+L ++
Sbjct: 443 -SKLARKVDGFIEHSSTESQG--------LAESKNAQRSSTPVLFQVQSFLLSLMNPSSE 493
Query: 391 EFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQ 450
L + + D +++ D + + + + +
Sbjct: 494 GKLFFENTQN---------------------------DVLMKYILLDPTNHFREIVEDAR 526
Query: 451 SVVITSGTLSPID-----LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTK 505
+V++ GT+SP++ L+P L+ + + S+ + D + M +T+G+
Sbjct: 527 AVILAGGTMSPMEDYADHLFP-YLSPERLRTYSYGHVIPSDNLKAMPVTKGAFNTEFDFT 585
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEI 559
+ R+D + G+ + + ++PDG+V FF SY Y+++++ W + +L I
Sbjct: 586 YAKRNDESLIMGLGRTIAALCRVIPDGVVVFFPSYDYLNQVLTIWKKLLPNSQLSVLDSI 645
Query: 560 MQHKLVFIETQD-VVETTLALDNYRKACDCGRG--AVFFSVARGKVAEGIDFDRHYGRLV 616
+ K++F E+QD T L Y A + G G A+ SV GK++EGI+F GR V
Sbjct: 646 QKSKVLFHESQDKATNTDELLQGYSNAINAGSGGGALLLSVMGGKLSEGINFSDRLGRGV 705
Query: 617 IMFGVPFQYTLSKILLARLEYLR-DTFQIKEG-----------------DFLTFDALRQA 658
I+ G+PF S + A+++++ T++ ++G +F +R
Sbjct: 706 IVVGLPFPNLRSAVWQAKIQHVEHKTYEREDGQGMSEESRKLTAKAAGREFYENSCMRTV 765
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
QC+GR IR + DY +I D+RY ++KLP WI +L A + + F
Sbjct: 766 NQCIGRAIRHQNDYAAIIMMDRRYGTPRIQNKLPNWIRQNLVAAASEQPIERTIGDISAF 825
Query: 719 LRK 721
RK
Sbjct: 826 FRK 828
>gi|302818654|ref|XP_002991000.1| hypothetical protein SELMODRAFT_132642 [Selaginella moellendorffii]
gi|300141331|gb|EFJ08044.1| hypothetical protein SELMODRAFT_132642 [Selaginella moellendorffii]
Length = 834
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 173/704 (24%), Positives = 289/704 (41%), Gaps = 125/704 (17%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
P+K+ +C+RT ++ + + ELK + + I L SRK LCVN VL +
Sbjct: 162 PLKIFFCSRTHSQLSQFIRELK--------RTSFSTSLKTIALGSRKTLCVNQDVLKLGS 213
Query: 127 RDSVDAAC---------------RKRTASWV-----------RALAAENPNIETCEFF-- 158
++ C + + S+V R + ++ C F
Sbjct: 214 ASRINDRCLDLQKKKKSSSQKVSTRNSPSFVSHHNFFQVDDQRVIKSKT---SACPFLKK 270
Query: 159 ENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVA 218
+ K AV+ ++DL G++ G CPY+ +R+ + A VVV YQ LL
Sbjct: 271 QRQRKQFKEAVVASQPMDIEDLVHLGQKLGSCPYYGSRNSLPMAQVVVLPYQSLLHAATR 330
Query: 219 GIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA 278
+ + K+SVV+FDEAHN+ + S + L + S++++ + RF+
Sbjct: 331 ESLGINL-KDSVVIFDEAHNLVDTVTNTYSSQLSTLQLRQVS---SQLSEYLSRFRT--- 383
Query: 279 GRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL 338
RL R ++ L + L A L L S +E PG
Sbjct: 384 -RLAPANRRYIQTLLV---LVQALLER--LMSVGSREKEPG------------------- 418
Query: 339 RGRLETENVEKEGPVSFVASITAHAGIDQKTL-RFCYERLHSLMLTLEITDTDEFLHIQT 397
++V+ ++ + GID L + C S ++ D++L Q
Sbjct: 419 -----VQDVQTPAAITTINDFVFSLGIDNINLFKLCRYIKESNIVNKVSGYGDKYLSQQN 473
Query: 398 ICDFATLVGTY-------------TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP 444
++ G + + G +I+E D + + DA+
Sbjct: 474 ELSPSSTAGFHALAAFLVSLTTAQSDGRVLIVESSDGEC------MFKFLMLDAAKHFSE 527
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSRSF---KMSLTRDCICPMVLTRGSDQL 500
V + ++V++ GTL P+ ++ RLL P S F + + I P+ + +G
Sbjct: 528 VVQQARTVILAGGTLQPVAEMRDRLLFQVPDESLHFFSCGHIVPGESILPLAIAKGPSGK 587
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
+ RS P + G+LLV + IVP+GIV FF S+ Y ++ W+ SGIL I+
Sbjct: 588 TFDFTYQSRSSPQMIEELGRLLVNISVIVPEGIVVFFPSFEYESQVHKCWDKSGILSSIL 647
Query: 561 QHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
+ K +F E ++ L Y+ + G GA+ SV GK++EGI+F GR V+M G
Sbjct: 648 KKKNIFREPRNASAVEAVLQEYKTSITTGGGALLLSVVGGKMSEGINFSDGMGRCVVMVG 707
Query: 621 VPFQYTLSKILLARLEY---LRDTFQIKEG---------------------DFLTFDALR 656
+P+ + LL +++Y L +T KE D+ ++
Sbjct: 708 LPYPSSRDPELLEKIKYIDELNNTKNRKESSSPPSQQRTGFTLQQCGHRGRDYYENLCIK 767
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRY-SRHDKRSKLPGWILSHL 699
Q +GR IR DY ++ D RY + +KLP WI HL
Sbjct: 768 AVNQSIGRAIRHAKDYAAILLLDGRYVTTGGPAAKLPEWIKEHL 811
>gi|76156607|gb|AAX27782.2| SJCHGC01374 protein [Schistosoma japonicum]
Length = 226
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 5/189 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPY+ IYPEQY YM+ELKR LDAKGH +LEMP+GTGKT++LLSLI +Y+
Sbjct: 1 MKINIDGLLVYFPYEYIYPEQYHYMIELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYM 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNY---QTRHLGPAAKILAIGLSSRKNLCV 117
++P K +YC+RTV E+EK + ELK+L Y +T G +L I LSSRKNLC+
Sbjct: 61 KARPGIVEKFVYCSRTVPELEKVIDELKVLDKYYADETNEKG--CGLLGIILSSRKNLCI 118
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+ V A + +VD+AC + TAS+VR +PN+ C+++E ++ PG+Y++
Sbjct: 119 HRDVKHAGDGAAVDSACFRLTASFVRKNRIADPNVAYCKYYEEFDLNGRDNPFAPGIYSM 178
Query: 178 QDLRAFGKQ 186
D++A+ K
Sbjct: 179 ADIKAYAKN 187
>gi|302802273|ref|XP_002982892.1| hypothetical protein SELMODRAFT_116951 [Selaginella moellendorffii]
gi|300149482|gb|EFJ16137.1| hypothetical protein SELMODRAFT_116951 [Selaginella moellendorffii]
Length = 852
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 172/704 (24%), Positives = 289/704 (41%), Gaps = 125/704 (17%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
P+K+ +C+RT ++ + + ELK + + + L SRK LCVN VL +
Sbjct: 180 PLKIFFCSRTHSQLSQFIRELK--------RTSFSTSLKTVALGSRKTLCVNQDVLKLGS 231
Query: 127 RDSVDAAC---------------RKRTASWV-----------RALAAENPNIETCEFF-- 158
++ C + + S+V R + ++ C F
Sbjct: 232 ASRINDRCLDLQKKKKSSSQKVSTRNSPSFVSHHNFFQVDDQRMIKSKT---SACPFLKK 288
Query: 159 ENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVA 218
+ K AV+ ++DL G++ G CPY+ +R+ + A VVV YQ LL
Sbjct: 289 QRQRKQFKEAVVASQPMDIEDLVHLGQKLGSCPYYGSRNSLPMAQVVVLPYQSLLHAATR 348
Query: 219 GIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA 278
+ + K+SVV+FDEAHN+ + S + L + S++++ + RF+
Sbjct: 349 ESLGINL-KDSVVIFDEAHNLVDTVTNTYSSQLSTLQLRQVS---SQLSEYLSRFRT--- 401
Query: 279 GRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL 338
RL R ++ L + L A L L S +E PG
Sbjct: 402 -RLAPANRRYIQTLLV---LVQALLER--LMSVGSREKEPG------------------- 436
Query: 339 RGRLETENVEKEGPVSFVASITAHAGIDQKTL-RFCYERLHSLMLTLEITDTDEFLHIQT 397
++V+ ++ + GID L + C S ++ D++L Q
Sbjct: 437 -----VQDVQTPAAITTINDFVFSLGIDNINLFKLCRYIKESNIVNKVSGYGDKYLSQQN 491
Query: 398 ICDFATLVGTY-------------TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKP 444
++ G + + G +I+E D + + DA+
Sbjct: 492 ELTPSSTAGFHPLAAFLVSLTTAQSDGRVLIVESSDGEC------MFKFLMLDAAKHFSE 545
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSRSF---KMSLTRDCICPMVLTRGSDQL 500
V + ++V++ GTL P+ +L RLL P S F + + I P+ + +G
Sbjct: 546 VVQQARTVILAGGTLQPVAELRDRLLFQVPDESLHFFSCGHIVPGESILPLAIAKGPSGK 605
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
+ RS P + G+LL+ + IVP+GIV FF S+ Y ++ W+ SGIL I+
Sbjct: 606 TFDFTYQSRSSPQMIEELGRLLINISVIVPEGIVVFFPSFEYESQVHKCWDKSGILSSIL 665
Query: 561 QHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
+ K +F E ++ L Y+ + G GA+ SV GK++EGI+F GR V+M G
Sbjct: 666 KKKNIFREPRNASAVEAVLQEYKTSITTGGGALLLSVVGGKMSEGINFSDGMGRCVVMVG 725
Query: 621 VPFQYTLSKILLARLEY---LRDTFQIKEG---------------------DFLTFDALR 656
+P+ + LL +++Y L +T KE D+ ++
Sbjct: 726 LPYPSSRDPELLEKIKYIDELNNTKNRKESSSPPSQQRTGFTLQQCGHRGRDYYENLCIK 785
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRY-SRHDKRSKLPGWILSHL 699
Q +GR IR DY ++ D RY + +KLP WI HL
Sbjct: 786 AVNQSIGRAIRHAKDYAAILLLDGRYVTTGGPAAKLPEWIKEHL 829
>gi|340503511|gb|EGR30093.1| regulator of telomere elongation helicase 1, putative
[Ichthyophthirius multifiliis]
Length = 671
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 163/667 (24%), Positives = 301/667 (45%), Gaps = 102/667 (15%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----SLITSYV 60
++ + +YFPY YP+Q YM ++ ++L+ + LL+ PTGTGKT+ LL + + Y
Sbjct: 44 IDGIDIYFPY-RPYPQQIMYMSKVIQSLNQGNNSLLQSPTGTGKTLCLLCATIAWLKKYR 102
Query: 61 LSKPEN-----PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
EN P K++Y +RT ++++ + ELK QT + P +LA SR
Sbjct: 103 EQNQENIDNVPPKKIVYSSRTHSQIQQVVKELK-----QTIY-RPRITVLA----SRDQY 152
Query: 116 CVNSRVLAAENRDSVD----AACRKRTASWVRALAAENPNIETCEFFE-NYEKAASAAVL 170
C L E ++ D + C+K N +C+F++ N+E +
Sbjct: 153 C-----LKKEYQNLTDWTLISYCQKAI------------NEHSCKFYQKNHENLEE--IF 193
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
+ +++LR G++ G+CPYF +R + +++ Y Y+ D + A + E+ S+
Sbjct: 194 STDIMDIEELRQNGQKNGFCPYFHSRRVKDCVDIIFMPYNYIFDNQNASPFNIEL-TNSI 252
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE-----Y 285
++FDEAHNI + E+ S S+ + LE + + + I+ +K + R + E
Sbjct: 253 LIFDEAHNIAKIAEESTSFSITIKNLEAIETEIKLLREIIQSYKDPNTFRQKKESHKNKI 312
Query: 286 NRL--VEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE 343
N+L ++ LR + + L IL+ +P F L++ ++ ++ E
Sbjct: 313 NKLQEIDTQGLRSSNQDCDL--------ILQHILP--------FKKYLQKFIENIQKNPE 356
Query: 344 TEN--VEKEGPVSF--VASITAHAGIDQKTLRFCYERLHSLMLT----LEITDTDEFLH- 394
+ KEG F + + T + + TL ++ ++ L+IT+ E++
Sbjct: 357 NSETIISKEGRDIFQILENNTIPIQLQENTLDTYFQENNNTFQQKKEGLKITNLQEYIKK 416
Query: 395 -IQTICDFATLVGTYTRGFSIIIEPFDERM------PHIPDPVLQLSCHDASLAVKPV-F 446
+ I D +T + + + + + P + + C D S++ +
Sbjct: 417 LVMAIEDLSTTQNYGLDKWMLFLSKVQKLLCVEKVEPENEQSEIYMQCLDPSVSFSFIKI 476
Query: 447 DRFQSVVITSGTLSPIDL--------YPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
S+++TSGTL+P D +P +LN V+ K L CI +G
Sbjct: 477 KNPHSILLTSGTLAPFDSWELELKIPFPIILNNQHVIDNK-KNLLAGICI------KGPL 529
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS--GIL 556
+ + + R + + G L+ + +P+GI+ F S S W + I+
Sbjct: 530 EQELEFTYQNRQKNLILDDVGLTLLNLCKFIPNGILVIFNSSSSYWNCRKQWENGEHKIM 589
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
++ +HK +F E ++ E + NY +A +GA+ F++ RGKV+EGIDF R V
Sbjct: 590 NKLKEHKQLFFEPKNSYEMNSFMKNYTQAAKSKQGAILFAICRGKVSEGIDFYDELARAV 649
Query: 617 IMFGVPF 623
+ GVP+
Sbjct: 650 FLIGVPY 656
>gi|395836775|ref|XP_003791325.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Otolemur garnettii]
Length = 880
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 173/672 (25%), Positives = 282/672 (41%), Gaps = 80/672 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVQKSPFGKDVRLVSLG--SRQNLCVNQDVKRLGSV 278
Query: 128 DSVDAACR--KRTASWVRALAAE-------NPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C +R+ R A E C F+ + V ++
Sbjct: 279 QLINDRCMDMQRSKHEKRNEAEEEKPKRRRQEKQAACPFYSYEHMHLLRDEVLAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL ++Q + VV+ DEAHN
Sbjct: 339 QLVALGKEAWACPYYGSRFAIPAAQLVVLPYQMLLHAATREAAGIQLQGQ-VVIIDEAHN 397
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
+ + SV V L A S++ Q +ER+ G A R +
Sbjct: 398 LIDAITGIHSVEVSGSQLCQAH---SQLLQYMERYGCRALGS------------AGRLCI 442
Query: 299 PNA-WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
P+ W+ + +D L ++ NI + V R + + R E+ G V
Sbjct: 443 PSVVWMELKTI-NDFLFQSQIDNI----NLFKVRRYCEKSMVSRKLFGFTERYGAVLSSQ 497
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE---------FLHIQTICDFATLVGTY 408
G + +RL + T DE +HI+ F T + T
Sbjct: 498 EKPRLTGFQE-----FLQRLQPGVTEAPATPVDEGQARPPTSPLMHIE---GFLTALTTA 549
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPR 467
+ II+ + L+ + ++ V +++VI GTL P+ D +
Sbjct: 550 NQDGRIILN----HQGSLSQSSLKFLLLNPAVHFAQVVKECRAMVIAGGTLQPVSDFREQ 605
Query: 468 LL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLL 522
LL VV S + D I P+VL+ G P+ K+ R P + G++L
Sbjct: 606 LLACAGVEAERVVEFSCGHVIPPDNILPIVLSTGISNRPLDFKYQHRELPQMMDEAGRIL 665
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY 582
+ +++P G+VCFF SY Y ++ A W SG+L + K +F E + + L Y
Sbjct: 666 FCLCNVIPGGVVCFFPSYEYQRQVHAYWEKSGVLCRLASRKKIFQEPKSTNQVEQVLTEY 725
Query: 583 RKACD-CGR-------GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLAR 634
K + CG+ GA+ SV GK++EGI+F + GR V+M G+P+ S L +
Sbjct: 726 SKCIENCGQVRGKMVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNVRSPELQEK 785
Query: 635 LEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ YL T G AL R Q +GR IR + D+ ++F D+RY++
Sbjct: 786 MAYLDQTLPRIPGKAPPGKALAENLCMRAVNQSIGRAIRHQRDFASIVFLDQRYAQPPVL 845
Query: 689 SKLPGWILSHLR 700
+K+PGWI ++
Sbjct: 846 AKMPGWIRDRVK 857
>gi|358341159|dbj|GAA28295.2| regulator of telomere elongation helicase 1 [Clonorchis sinensis]
Length = 1325
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 154/630 (24%), Positives = 269/630 (42%), Gaps = 96/630 (15%)
Query: 109 LSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASA- 167
+ SR LC+ V + ++ + ACR R + TC+++ N++ +
Sbjct: 92 IGSRDQLCLLPEVNSLDSSSAKIFACRGRVQT------------RTCDYYRNFDMKRDSL 139
Query: 168 --AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
+ GV ++DL GK G CPY+++R A ++ Y YLLDPK+ + + E+
Sbjct: 140 MNTIKAEGVVDIEDLVKLGKSTGCCPYYMSRESKTDAEIIFTPYNYLLDPKIRKLYNIEL 199
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY 285
Q + V+FDEAHNI L + +T A+R + + I +K L +Y
Sbjct: 200 QN-TAVIFDEAHNIVRSSWSMLYAYILSKTPGYASRTTAEY-ECICTYKC-----LVQQY 252
Query: 286 NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE-- 343
++ ++ ++ PA+P + + FL V+ LV + +
Sbjct: 253 FYMMHCSSI--------ITAPAVPLSVDSWNLSTFWNEVSEFLKVISILVHCIADLFQVV 304
Query: 344 --TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF 401
++NV P S + S+ G+D CY + DE L
Sbjct: 305 FDSKNV---SPHSNIFSLLRLPGVDYS---HCYR----------VFAKDEQLA------- 341
Query: 402 ATLVGTYTRGFSIIIEPFDERMPHIPDPV----LQLSCHDASLAVKPVF-DRFQSVVITS 456
RG +D R PV L C A++ + +R + V++TS
Sbjct: 342 -------NRGRVTADRVWDSRGVGSNQPVTDRTLSYWCLSPGRAMQDLIKERVRCVILTS 394
Query: 457 GTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
GTL PI+ L+ + +S + + + V+TRG D + +++ + R P
Sbjct: 395 GTLYPIEPIQSELHMNFPISLQNPHVIKPEQVRLAVITRGKDGIALNSSYATRDKPEYRT 454
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
+ G LVE++ IVP G++ FF SY M + + W + + +++++K +F+E +D V+
Sbjct: 455 SLGLTLVEIIQIVPAGLLVFFTSYGMMSQCVDAWKNEQLYDKMLRYKRIFVEPRDKVQFA 514
Query: 577 LALDNYRKA------CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
+YR CD GA F+V RG+ +EG+D GR V++ G+P+
Sbjct: 515 KVFSDYRDVASGAVPCDVN-GAALFAVMRGRASEGLDLADFAGRGVVVLGLPYPPFHDAR 573
Query: 631 LLARLEYLRDTF------QIKEGD--------------FLTFDALRQAAQCVGRVIRSKA 670
+ ++ YL + K G + A R Q +GRVIR
Sbjct: 574 VRLKMSYLDEQLAELNNQASKSGSDAKAFVASHPTGKKWYNQQAWRAVNQSIGRVIRHHR 633
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
D+G + D+R+++ RS+ P W+ +R
Sbjct: 634 DFGAIFLCDERFAQVSARSQFPHWMQPSMR 663
>gi|307106006|gb|EFN54253.1| hypothetical protein CHLNCDRAFT_14687, partial [Chlorella
variabilis]
Length = 103
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/103 (76%), Positives = 91/103 (88%)
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+QYTLS+IL ARLEYLR+ FQI+E D+L FDA+RQAAQCVGRVIRSKADYG+M+FADKRY
Sbjct: 1 YQYTLSRILRARLEYLREAFQIRENDYLAFDAVRQAAQCVGRVIRSKADYGLMVFADKRY 60
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
RHDKR KLP WI HL+D+HLNLSTDM L IAR+F+R MAQP
Sbjct: 61 QRHDKRDKLPAWITQHLKDSHLNLSTDMLLCIARDFMRAMAQP 103
>gi|328871465|gb|EGG19835.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 1125
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 182/719 (25%), Positives = 309/719 (42%), Gaps = 93/719 (12%)
Query: 36 GHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQT 95
G PT T LL V S P K+ +C+RT ++ + +EL L Y+
Sbjct: 274 GGSAATSPTTNVSTPDLLEKAKEEVASVP----KIFFCSRTHSQIAQLTSEL-LKTPYRP 328
Query: 96 RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETC 155
R L+SR + C+N ++ + + CRK VR C
Sbjct: 329 R---------MCVLASRDHYCINPKLAGYDRKKD---KCRK-----VRKE-------RNC 364
Query: 156 EFFENYEKAASAAVLP---PG----VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
F E K S + +P PG V++++D GK G CPY+ ++ ++ AN++
Sbjct: 365 RF-ERRTKQYSLSQIPKFLPGGEKEVWSIEDFIDGGKDLGECPYYASKGFIEHANLIFCP 423
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y Y+++P + I KE S+++FDEAHNI++ + A S + ++ +N+
Sbjct: 424 YNYIIEPSIRKIF-KEHFDNSIIIFDEAHNIEDSLMSAASFELTKE----------EVNE 472
Query: 269 EIERFKATDAGRL---RAEYNRLVEGLALRG--NLPNAWLS-NPALPSDILKEAVPGNIR 322
+ K T + + +A N L L + W+S N + +D N+
Sbjct: 473 STTQCKDTMSNSMIMDQATPNEKETMLYLYSLFDKMGTWMSRNEKVLTD-QDYKNQNNVW 531
Query: 323 RAEHFLHVL-----------RRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLR 371
L VL R+L + L RLE ++ E G VS A G +K L
Sbjct: 532 SGRKILEVLEKDFGLTAANYRKLRESL-DRLEKDDTEGGGTVS--AETPNKPG--EKGLA 586
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVL 431
++ + +E D +E L + + A L Y F + D RM V
Sbjct: 587 DEHQSKTKQRVKMEKRD-NELLSPKILGILANLAQVYDFVFGNLQFISDFRMFFQRQEVY 645
Query: 432 QLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF-HPVVSRSFKMSLTRDCICP 490
+ C + A K + ++ +++++TSGTL+P++ + L+ PV + + +
Sbjct: 646 GIWCMNPRSAFKSIREKARTIILTSGTLAPLNSFASELSSPFPVTAELGNLGDITKRVWI 705
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
L G++ + F + G +++ + +VP+G++ FF SY++M++I W
Sbjct: 706 GTLGVGTNNTKMDCTFKGSENLQFQDALGDAILKHLQVVPNGVLVFFPSYAFMEKIKNRW 765
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDR 610
+G+ +I Q K +F E + + L+ Y A GA FSV RGKV+EGI+F
Sbjct: 766 EMTGMYNKIDQCKPIFFEPKQTKDFKRVLEGYNDAVKT--GATLFSVCRGKVSEGINFSD 823
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ----------IKEGDFLTFDALRQAAQ 660
Y R VI+ G+P L I R++ L+ + I ++ T R Q
Sbjct: 824 EYARGVIIVGIP----LPNIKDLRVD-LKKKYNDSNCSIIQNLINGNEWYTLQGYRALNQ 878
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 719
+GR IR K DYG ++ D R+++ L W +++ N S D +L + F
Sbjct: 879 AIGRCIRHKDDYGSILLIDSRFTQESVWRNLSRWARMCIKN---NNSIDRSLPSLKSFF 934
>gi|84997393|ref|XP_953418.1| helicase [Theileria annulata strain Ankara]
gi|65304414|emb|CAI76793.1| helicase, putative [Theileria annulata]
Length = 951
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 170/718 (23%), Positives = 311/718 (43%), Gaps = 105/718 (14%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
KPE +K++Y +RT ++++ + E++ + +L +L L+SR LC+N L
Sbjct: 132 KPER-IKIMYASRTHSQLKQVVGEVEKTEYSRQFNLRGLKGVL---LASRDQLCINP--L 185
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP-PGVYTLQDLR 181
+ V A++ +AL E CE+F ++ + ++D+
Sbjct: 186 RGKMTGEV-------LANFCKALVQE----RKCEYFNTMRGDKNSKQFQFERLMDIEDMV 234
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
GK + +CPYF + + A++++ Y YLL P + + ++ ++S++V DEAHN +
Sbjct: 235 ETGKNKHFCPYFSVKEGQEHADLILLPYNYLLSPDIRDAVDIDI-RDSILVIDEAHNAEQ 293
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY--NRLVEGLALRGNLP 299
V E S +++ + L R + + + D R+ ++ + L
Sbjct: 294 VAEEGASFEIKQTDIGKYIETLKRFGIFYKDYISEDPTRINENEIDFSILNSIGLSLQYT 353
Query: 300 NAWLSNPALPS----DILKEAVPGNIRR-------AEHFLHVLRRLVQYLRGRLETEN-- 346
+ +L+ L + DI +++ R +H ++ + ++ Y+ G++E +
Sbjct: 354 DEFLTGITLLNNESFDIRRDSKDHIGTRWVIKELNKDHLVYGGQSVLDYMNGKMEYDKLK 413
Query: 347 -VEKEGPVSFVASITAHAGIDQKTLRFCYERLHS-------------------LMLTLEI 386
V+ E ++ V I I+ +++ +S ++L+ E+
Sbjct: 414 EVDVENTINRVVVILTKGTIEDSKHEEVFKKHYSDRTLKEDCILLTMLRKFISILLSPEV 473
Query: 387 TDTDEFLHIQTICD--FATLVGT---------YTRGFSIIIEPFD-----ERMPHIPDPV 430
D ++ ++ D F L T + + F F+ E I V
Sbjct: 474 NDYPQYYNVIITNDERFEKLKKTNMDDIKSYGWNKKFKRDESRFELIKRREDNTEIIPKV 533
Query: 431 LQLSCHDASLAVKPVFDRFQ-----SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR 485
C L P F R + S+++TSGTL P+D+ R L V F + L
Sbjct: 534 FWFKC----LQPVPTFVRLKNAGARSIILTSGTLGPLDVLERHLGGGQV---KFDIKLQN 586
Query: 486 D-CICPMVLTRGS------DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ I P + GS D +S+ F+ R+ G +V V VP G++ FF
Sbjct: 587 EHVIDPSRVWVGSISGNAEDPNMLSSTFNTRNKMNYITELGNAVVSFVKNVPAGVLVFFC 646
Query: 539 SYSYMDEIIATWNDSGILKEIMQHKLVFIETQ--------DVVETTLA--LDNYRKACDC 588
SY+ M+ + W GI +I +K V++E + DVV T + Y++ D
Sbjct: 647 SYNVMNYTTSVWKKIGIYSKIEMYKKVYLEARPVENPEDSDVVPVTTMDIFNRYKENIDK 706
Query: 589 GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL----RDTFQI 644
G G+VFF++ RG++AEGIDF Y R + + G+P+ +++YL T++
Sbjct: 707 GNGSVFFAICRGRLAEGIDFSDDYCRGIFVCGIPYPSRFDDNTALKMDYLDKLGHKTYEK 766
Query: 645 KE--GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
D+ T A+R Q VGR IR DYG ++ AD R+ + L W+L+ L+
Sbjct: 767 GNLANDWYTSQAIRAINQAVGRSIRHNRDYGAILLADYRFKYVPVKPNLSKWVLNRLK 824
>gi|350631746|gb|EHA20117.1| ATP-dependent DNA helicase-like protein [Aspergillus niger ATCC
1015]
Length = 987
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 165/682 (24%), Positives = 284/682 (41%), Gaps = 121/682 (17%)
Query: 68 VKLIYCTRTVHEMEKTLAELK-----------LLHNYQTRHLGPAAKILAIGLSSRKNLC 116
VK+ YC+RT ++ + EL+ LL T ++ + L SRKNLC
Sbjct: 189 VKIFYCSRTHSQLTQFAGELRRVKMPWSIPKDLLSTDLTGEEELEERVKHVTLGSRKNLC 248
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIET---CEFFENYEKAASAAVLP-- 171
+N RV + EN +++ C L + PN+ C F + E
Sbjct: 249 INPRVSSLENATAINERC----------LDLQQPNVNPQHRCPFLPSKEDERQVLQFRDH 298
Query: 172 --PGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
V ++DL GK+ G CPY+ +R +V+ + V + L+ V G
Sbjct: 299 ALSTVKDIEDLGKLGKKIGICPYYASRSVVKDSEVS----REALNLSVKG---------H 345
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
V++ DEAHN+ + SV+V TL +LS++ +FK G+ R+ +++
Sbjct: 346 VIIIDEAHNLMDAISNIHSVTV---TLSQLQTSLSQLTIYGRKFKTRLKGKNRSYVAQVI 402
Query: 290 EGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEK 349
+L + +LR LE+
Sbjct: 403 ---------------------------------------RLLSSIAAHLRSLLESGKA-P 422
Query: 350 EGPVSFVASITAHAGIDQ----KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLV 405
EGPV ++ + + G+DQ K R+ E + + + T + Q V
Sbjct: 423 EGPV-LISELMSGKGVDQINPYKLSRYLQESKLARKVDGYVEFTRDPSDKQASRSPTVPV 481
Query: 406 GTYTRGF--SIIIEPFDERM---PHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
+ +GF S++ + R+ D L+ D + + + + +++++ GT+S
Sbjct: 482 LFHIQGFLLSLMNPSAEGRLFYSKEQGDIQLKYMLLDPTNQFRELVEDARAIILAGGTMS 541
Query: 461 PIDLYPRLLNFHPVVSR----SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
P+ Y L + SR S+ + + + L RG +D R +
Sbjct: 542 PMTDYMNHLFSYVPASRLDMFSYGHVIPPENLIAHTLVRGVQGSEFDFTYDARDSEKMIM 601
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE-------IMQHKLVFIET 569
+ G+ + + ++PDG+V FF SY Y+ ++ W + ++ I Q K + E+
Sbjct: 602 DLGRTIATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILSES 661
Query: 570 QDVVETTLAL-DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+D+ TT L Y D GRGA+ SV GK++EGI+F GR V++ G+PF S
Sbjct: 662 RDMTVTTEELLHTYANTVDSGRGALLLSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRS 721
Query: 629 KILLARLEYL-RDTFQIKEG--------------DFLTFDALRQAAQCVGRVIRSKADYG 673
+ A+++Y+ + T Q G DF +R QC+GR IR + DY
Sbjct: 722 AVWQAKIQYIEQKTHQQATGSEASRQLAAKAAGRDFYENSCMRAVNQCIGRAIRHRNDYA 781
Query: 674 MMIFADKRYSRHDKRSKLPGWI 695
++ D+RY + ++KLP WI
Sbjct: 782 AIVLVDRRYEKPGIQAKLPAWI 803
>gi|268566755|ref|XP_002639805.1| C. briggsae CBR-BCH-1 protein [Caenorhabditis briggsae]
gi|229891627|sp|A8WS58.1|RTEL1_CAEBR RecName: Full=Regulator of telomere elongation helicase 1 homolog
Length = 994
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 193/809 (23%), Positives = 338/809 (41%), Gaps = 160/809 (19%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL----SK 63
++ FP++ Y Q +M + LD K LE PTGTGKT++LL ++V SK
Sbjct: 17 TSIKFPFEP-YECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAWVQKLKESK 75
Query: 64 P-----------------ENPVK------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGP 100
P E+ +K + Y +RT ++E+ + EL +T +
Sbjct: 76 PMDFATWQSSGAGGAEKTEDKLKNSFIPTIFYASRTHSQLEQVVHELN-----RTEYKWV 130
Query: 101 AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFEN 160
IL SR++ C+N +V + + R A R L ++ +C ++
Sbjct: 131 KTTILG----SREHFCINQKVKKIKESN--------RQAHVCRGLVSK----RSCHYYNK 174
Query: 161 YEKAAS---AAVLPPG-VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPK 216
++ + +L G ++D G Q CPYF++R + A +++ Y Y++DPK
Sbjct: 175 FDALTTDKANEILEKGEAMDIEDFVKIGTQNSICPYFMSRQRSETAELILLPYNYIIDPK 234
Query: 217 VAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI---------- 266
+ ++ K S+V+FDEAHN++++C S + ++ L ++
Sbjct: 235 MRRRYKLDL-KNSIVIFDEAHNLESICESNASAELSSTSIALCIEELKKVLALLVEEEEN 293
Query: 267 -----NQEIERFKATDAG-------RLRAE---------------YNRLVEGLALRGNLP 299
+ E E F LR E +++L E L+ P
Sbjct: 294 AREEADNETEAFGTQKIDLTKKLIENLRTEDLMALLEKVFTLEENFDKLFESDQLKSVPP 353
Query: 300 NAWLSNPALPSDILKEAVP-----GNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGP-- 352
L A IL E + GN E F+ VLR + YL + E ++ ++G
Sbjct: 354 ---LDGKASDGAILLETLANSGCDGN--SVERFVDVLRDAISYLLSKNEEVSLTEKGDGM 408
Query: 353 ---VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYT 409
F+ SI + H+ + + D E + + D AT+
Sbjct: 409 ESVADFLLSIYS---------------THAQEVAAAVGD--EHIKLADRVDPATVA---- 447
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPID--LYP 466
R + I ++ V++ C AS++++ + R ++V++ SGTLSPI Y
Sbjct: 448 RNCKLYIRKDSGKL------VIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYN 501
Query: 467 RLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMV 526
LNF ++ + +L + + ++TRG V + F R + + G+ L+ ++
Sbjct: 502 MGLNFGAILEN--EHALKQVPVLTSIVTRGKHGGLVGS-FQNRKNIEYVSDVGESLIRVM 558
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWNDSG---------ILKEIMQHKLVFIETQDVVETTL 577
P G++ FF SYS MDE++ W + +++ + K + +E + +
Sbjct: 559 ETTPQGVLVFFSSYSQMDELVEVWKKTKRGASDSPETFWEKMEKTKKIAVEPRAKEQLAA 618
Query: 578 ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
Y + GA +V RGKV+EGIDF R VI+ G+P+ + ++ + Y
Sbjct: 619 VRLRYTQGVSEPHGAALLAVCRGKVSEGIDFCDAESRAVIIVGIPYPPIHDERVVLKKMY 678
Query: 638 LRDTFQIKE--------GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS 689
L D K+ D+ +A R Q +GRV+R K D+G ++ D RY+ K
Sbjct: 679 LDDLMGRKDLTNEPQSSRDWYQMEAFRAVNQAIGRVLRHKNDFGTVVLIDTRYASA-KPE 737
Query: 690 KLPGWILSHLRDAHLNLSTDMALHIAREF 718
P W+ + + S + AL AR F
Sbjct: 738 MFPKWLRNTISRCD---SNNCALKTARFF 763
>gi|206558115|sp|A2QY22.1|CHL1_ASPNC RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|134079766|emb|CAK40902.1| unnamed protein product [Aspergillus niger]
Length = 874
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 167/700 (23%), Positives = 287/700 (41%), Gaps = 127/700 (18%)
Query: 68 VKLIYCTRTVHEMEKTLAELK-----------LLHNYQTRHLGPAAKILAIGLSSRKNLC 116
VK+ YC+RT ++ + EL+ LL T ++ + L SRKNLC
Sbjct: 201 VKIFYCSRTHSQLTQFAGELRRVKMPWSIPKDLLSTDLTGEEELEERVKHVTLGSRKNLC 260
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIET---CEFFENYEKAASAAVLP-- 171
+N RV + EN +++ C L + PN+ C F + E
Sbjct: 261 INPRVSSLENATAINERC----------LDLQQPNVNPQHRCPFLPSKEDERQVLQFRDH 310
Query: 172 --PGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV------------------VVYSYQY 211
V ++DL GK+ G CPY+ +R +V+ + V V Y
Sbjct: 311 ALSTVKDIEDLGKLGKKIGICPYYASRSVVKDSEVCCLRARSSIDLVPDEWQIVTLPYPL 370
Query: 212 LLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE 271
LL ++ + K V++ DEAHN+ + SV+V TL +LS++
Sbjct: 371 LLQRSAREALNSSV-KGHVIIIDEAHNLMDAISNIHSVTV---TLSQLQTSLSQLTIYGR 426
Query: 272 RFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL 331
+FK G+ R+ +++ +L
Sbjct: 427 KFKTRLKGKNRSYVAQVI---------------------------------------RLL 447
Query: 332 RRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQ----KTLRFCYERLHSLMLTLEIT 387
+ +LR LE+ EGPV ++ + + G+DQ K R+ E + + +
Sbjct: 448 SSIAAHLRSLLESGKA-PEGPV-LISELMSGKGVDQINPYKLSRYLQESKLARKVDGYVE 505
Query: 388 DTDEFLHIQTICDFATLVGTYTRGF--SIIIEPFDERM---PHIPDPVLQLSCHDASLAV 442
T + Q V + +GF S++ + R+ D L+ D +
Sbjct: 506 FTRDPSDKQASRSPTVPVLFHIQGFLLSLMNPSAEGRLFYSKEQGDIQLKYMLLDPTNQF 565
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR----SFKMSLTRDCICPMVLTRGSD 498
+ + + +++++ GT+SP+ Y L + SR S+ + + + L RG
Sbjct: 566 RELVEDARAIILAGGTMSPMTDYMNHLFSYVPASRLDTFSYGHVIPPENLIAHTLVRGVQ 625
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+D R + + G+ + + ++PDG+V FF SY Y+ ++ W + ++
Sbjct: 626 GSEFDFTYDARDSEKMIMDLGRTIATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQ 685
Query: 559 -------IMQHKLVFIETQDVVETTLAL-DNYRKACDCGRGAVFFSVARGKVAEGIDFDR 610
I Q K + E++D+ TT L Y D GRGA+ SV GK++EGI+F
Sbjct: 686 GQTVYNLIGQKKPILSESRDMTVTTEELLHTYANTVDSGRGALLLSVVGGKLSEGINFSD 745
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEG--------------DFLTFDAL 655
GR V++ G+PF S + A+++Y+ + T Q G DF +
Sbjct: 746 KLGRGVLIVGLPFPNIRSAVWQAKIQYIEQKTHQQATGSEASRQLAAKAAGRDFYENSCM 805
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R QC+GR IR + DY ++ D+RY + ++KLP WI
Sbjct: 806 RAVNQCIGRAIRHRNDYAAIVLVDRRYEKPGIQAKLPAWI 845
>gi|213404244|ref|XP_002172894.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
gi|212000941|gb|EEB06601.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
Length = 847
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 154/654 (23%), Positives = 278/654 (42%), Gaps = 100/654 (15%)
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEK 163
+ AI L+SRKNLC+N V + ++ C + + P ++ +++
Sbjct: 252 VRAISLASRKNLCINENVKRLGSAALINEKCIE--------IQGNCPFLQATTPIDDFRD 303
Query: 164 AASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
A A V+ ++D+ G+Q CPY+ R + A++V Y LL +
Sbjct: 304 AVLAEVM-----DMEDMITLGEQTQTCPYYGIREAIAPAHIVAVPYAMLLQQSTRDSLGI 358
Query: 224 EMQKESVVVFDEAHN-IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
+ +++V + DEAHN ID++C LS SV + + + L ++RF +G R
Sbjct: 359 SL-RDNVCILDEAHNVIDSIC-SILSASVSQTEVLLCQKQLQCY---LQRFAKRLSGPNR 413
Query: 283 AEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL 342
+L +R + LHV RL
Sbjct: 414 MHIQQL--------------------------------LRIVDELLHVFERLAGQ----- 436
Query: 343 ETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL------HSLMLTLEITDTDEFLH-- 394
E + F+A T + + T ++ + TLE D D H
Sbjct: 437 --EACTIDPATLFIAHGTDQINLHRLTQYISASKIARKANTFHVKNTLEAEDADHSRHAV 494
Query: 395 ------IQTICDFATLVGTYTRGFSII--IEPFDERMP-HIPDPVLQLSCHDASLAVKPV 445
I + F T + + + +E +E + H VL+ + D S + +
Sbjct: 495 PTGTPVIMKLATFLTAIANPSPEGRLFYRMESVEETVQGHNSKAVLEYALLDPSHEIAAL 554
Query: 446 FDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS----LTRDCICPMVLTRGSDQLP 501
++ +SV++ GT+SP+D +LL F + R + S + IC +VL++G+ P
Sbjct: 555 AEQARSVILAGGTMSPMDEIAQLL-FPSFLDRVKQFSCGHIVPESNICTVVLSKGTGGTP 613
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ R D ++ G+ ++ + +++PDG+V FF S+ ++ E I+ W S + + +
Sbjct: 614 FRFTYKNRGDVNALQDLGRTMLNLTAVIPDGVVVFFCSFRHLSEAISCWKKSDLWLRLCK 673
Query: 562 HKLVFIETQDVVETTLALDNYRK--------ACDCGRGAVFFSVARGKVAEGIDFDRHYG 613
K +F E D LA D +K + G+G + SV G+++EGI+F G
Sbjct: 674 RKPIFYE--DKEREALAGDGSKKSVFEDYCASVTAGKGGLLLSVINGRLSEGINFSDRLG 731
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD-------ALRQAAQCVGRVI 666
R V + G+PF A++ ++++ K + D +R A Q +GR I
Sbjct: 732 RCVAVVGMPFPNAQDVRWQAKMSFVKEKMSSKTEKGIDLDYEFAENTCMRAANQSIGRAI 791
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
R K DY ++ D+RY++ ++KLP W+ +++ A S +A+ +F R
Sbjct: 792 RHKDDYACILLLDERYNKPSTQAKLPKWLANNITHAQ---SFGVAMRQIAQFFR 842
>gi|384246051|gb|EIE19542.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 1621
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 182/769 (23%), Positives = 306/769 (39%), Gaps = 132/769 (17%)
Query: 37 HCLLEMPTGTGKTIALLSLITSYV------------------------LSKPEN-----P 67
+ LLE PTG+GKT++LL S+ PE P
Sbjct: 13 NALLEAPTGSGKTLSLLCSALSWQRKLKQEGYSEAWEGRPNIPDDGQGQETPEGKSVKTP 72
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKIL-------AIGLSSRKNLCVNSR 120
+ I CT + + R P +I I +SR + CV+S
Sbjct: 73 PEPISCTPPGSGSAGSTEGEVTPNGAPPRE--PLPRIFYATRTHSQIAQASRSHYCVHSG 130
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASA-AVLPPGVYTLQD 179
V N VD C K +C +F N K + A P V+ ++D
Sbjct: 131 VSKKPN---VDEECEKLLED------------RSCRYFNNLPKVLNGLATYVPQVHDIED 175
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L GK+ CPYF+AR + + A ++ Y YL+DP + + +Q +V++FDEAHNI
Sbjct: 176 LVQVGKEIKACPYFVARKIAEHAELLFCPYNYLIDPVIRSSMGINIQ-HAVIIFDEAHNI 234
Query: 240 DNV------------------------CIEALSVSVRRQTLEGATRNLSRINQEIERFKA 275
+++ C+EA S + + R + + + ER
Sbjct: 235 EDISRDAASVEMERASMVDVQKAFEYKCLEADSREIYGPLADAFGRFANWLKERCERPDV 294
Query: 276 TDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLV 335
Y + GL +R L A L KE V LH L
Sbjct: 295 RKQQGAGQRYEGITSGLQMREELEEAGLG---------KEQV--------DLLHEL---- 333
Query: 336 QYLRGRLETEN---------VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEI 386
Y++ R E + E++G A + +K F + L+ L +
Sbjct: 334 -YVKARAEEQKKEEPPAPALAEEDGASEHQLQNVASSQAKKKGAGFALGQTSRLLTILNL 392
Query: 387 TDTDEFLHIQTICDFATLVGTYTRG---FSIIIEPFDERMPHIPDPVLQ--LSCHDASLA 441
++ + D+ + + R D+ + LQ L C + ++A
Sbjct: 393 ------MYSSNVSDYRLALQRWYRSSQPRRRGRRREDDEEDEVAGWALQFCLWCLNPAVA 446
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYPRLLNFH-PVVSRSFKMSLTRDCICPMVLTRGSDQL 500
+ +S+++TSGTLSP+D + L+ PV + + R + + G D +
Sbjct: 447 FHSIAAAARSIILTSGTLSPLDSFASELDTSFPVRFEAPHVINARLQVWAGSICAGPDDV 506
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
++ ++ P + G + + IVPDG++ F SY +D ++ W +G+ ++
Sbjct: 507 KIAATYEHSLKPDFQDSVGASIAAIAGIVPDGLLVFLPSYVMLDRLMERWKVTGVWAQLQ 566
Query: 561 QHKLVFIETQDVVETTLA-LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
Q K + E + + A + ++ A GRGA+FF++ RGKV+EG+DF R VI+
Sbjct: 567 QTKAIVCEPRGTGDAFDAVMSDFYTAIREGRGAIFFAICRGKVSEGLDFTDKNARAVIVV 626
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD------ALRQAAQCVGRVIRSKADYG 673
G+PF + + +Y + + LT D A R Q VGR IR K DYG
Sbjct: 627 GIPFPNVKDTKVNLKKKYNDAGQRDRSRSLLTGDQWYSQQAFRALNQAVGRCIRHKLDYG 686
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
++ D+R+S + L W+ + + +++ S AL +EF ++
Sbjct: 687 AIVLLDRRFSNTANQRHLSRWVRTSI---NVHESFAPALESMKEFFARL 732
>gi|238506092|ref|XP_002384248.1| DNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220690362|gb|EED46712.1| DNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 777
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 164/680 (24%), Positives = 286/680 (42%), Gaps = 106/680 (15%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHN------------YQTRHLGPAAKILAIGLSSRKNL 115
+K++YC+RT ++ + +EL+ ++ T L + L++G SRKNL
Sbjct: 120 IKILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTDGLQEGVRHLSLG--SRKNL 177
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVY 175
C+N RV + +N ++ C V AAE + C F + E A V
Sbjct: 178 CINPRVSSLDNVTAISERCLDMQQPGV---AAE----QRCPFLPSNENEAQVLQFRDHVL 230
Query: 176 T----LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
++D+ GK G CPY+ +R + + + +V Y LL + + K VV
Sbjct: 231 ATVKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSI-KGHVV 289
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRL 288
V DEAHN+ + SV++ TL +L ++ +FK G+ R A+ RL
Sbjct: 290 VIDEAHNLMDAISNIHSVTI---TLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQVIRL 346
Query: 289 VEGLA--LRGNLPNAWL-SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETE 345
V + L+ L + P PSD++ I +L +YLR E++
Sbjct: 347 VTSITDHLKTILETSQAPEGPVQPSDLMSGKGVDQINPY--------KLCRYLR---ESK 395
Query: 346 NVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL-EITDTDEFLHIQTICDFATL 404
K S + A D+K + S +L L ++ + +I+ D
Sbjct: 396 LARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLMNLSAEGKLFYIKAQGDIQLK 455
Query: 405 VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
++++P ++ + + D ++V++ GT+SP+
Sbjct: 456 Y--------MLLDPMNQ--------------------FREIVDDARAVILAGGTMSPMTD 487
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMRSDPGVARNY 518
Y + + P V S + + + P VL +G F+ R + +
Sbjct: 488 Y--IHHLFPYVPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETRDSERMIVDL 545
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN-------DSGILKEIMQHKLVFIETQD 571
G+ + + ++PDG+V FF SY Y+ ++++ W + + I K + E++D
Sbjct: 546 GRTMAALCQVIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGKKTILHESRD 605
Query: 572 V-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
V + T L Y GRGA+ SV GK++EGI+F GR V++ G+PF S +
Sbjct: 606 VTISTEELLQEYASIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGLPFPNIRSAV 665
Query: 631 LLARLEYL-RDTFQIKEG--------------DFLTFDALRQAAQCVGRVIRSKADYGMM 675
A++ Y+ + ++ G DF +R QC+GR IR + DY +
Sbjct: 666 WQAKIHYVEQKAYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDYAAI 725
Query: 676 IFADKRYSRHDKRSKLPGWI 695
+ D+RY + + KLP WI
Sbjct: 726 VLMDRRYDKPAIQGKLPAWI 745
>gi|317151049|ref|XP_001824411.2| ATP-dependent RNA helicase CHL1 [Aspergillus oryzae RIB40]
Length = 858
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 162/683 (23%), Positives = 286/683 (41%), Gaps = 112/683 (16%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHN------------YQTRHLGPAAKILAIGLSSRKNL 115
+K++YC+RT ++ + +EL+ ++ T L + L++G SRKNL
Sbjct: 201 IKILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTDGLQEGVRHLSLG--SRKNL 258
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNI---ETCEFFENYEKAASAAVLPP 172
C+N RV + +N ++ C L + P + + C F + E A
Sbjct: 259 CINPRVSSLDNVTAISERC----------LDMQQPGVAAEQRCPFLPSNENEAQVLQFRD 308
Query: 173 GVYT----LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
V ++D+ GK G CPY+ +R + + + +V Y LL + + K
Sbjct: 309 HVLATVKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSI-KG 367
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEY 285
VVV DEAHN+ + SV++ TL +L ++ +FK G+ R A+
Sbjct: 368 HVVVIDEAHNLMDAISNIHSVTI---TLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQV 424
Query: 286 NRLVEGLA--LRGNLPNAWL-SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL 342
RLV + L+ L + P PSD++ I +L +YLR
Sbjct: 425 IRLVTSITDHLKTILETSQAPEGPVQPSDLMSGKGVDQINPY--------KLCRYLR--- 473
Query: 343 ETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL-EITDTDEFLHIQTICDF 401
E++ K S + A D+K + S +L L ++ + +I+ D
Sbjct: 474 ESKLARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLMNLSAEGKLFYIKAQGDI 533
Query: 402 ATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSP 461
++++P ++ + + D ++V++ GT+SP
Sbjct: 534 QLKY--------MLLDPMNQ--------------------FREIVDDARAVILAGGTMSP 565
Query: 462 IDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMRSDPGVA 515
+ Y + + P V S + + + P VL +G F+ R +
Sbjct: 566 MTDY--IHHLFPYVPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETRDSERMI 623
Query: 516 RNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN-------DSGILKEIMQHKLVFIE 568
+ G+ + + ++PDG+V FF SY Y+ ++++ W + + I K + E
Sbjct: 624 VDLGRTMAALCQVIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGKKTILHE 683
Query: 569 TQDV-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
++DV + T L Y GRGA+ SV GK++EGI+F GR V++ G+PF
Sbjct: 684 SRDVTISTEELLQEYASIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGLPFPNIR 743
Query: 628 SKILLARLEYL-RDTFQIKEG--------------DFLTFDALRQAAQCVGRVIRSKADY 672
S + A++ Y+ + ++ G DF +R QC+GR IR + DY
Sbjct: 744 SAVWQAKIHYVEQKAYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDY 803
Query: 673 GMMIFADKRYSRHDKRSKLPGWI 695
++ D+RY + + KLP WI
Sbjct: 804 AAIVLMDRRYDKPAIQGKLPAWI 826
>gi|395529687|ref|XP_003766940.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Sarcophilus harrisii]
Length = 539
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Query: 156 EFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP 215
E + ++ +P G+Y L DL+AFG+Q+GWCPYFLAR+ + ANV+VYSY YLLDP
Sbjct: 144 EIEKEFDALGRQTPIPWGIYNLDDLKAFGRQKGWCPYFLARYSILHANVIVYSYHYLLDP 203
Query: 216 KVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKA 275
K+A ++SKE+ +++VVVFDEAHNIDNVCI++L ++ R+TL+ NL + + + + K
Sbjct: 204 KIADLVSKELARKAVVVFDEAHNIDNVCIDSLRGNLTRRTLDRCQSNLETLQRTVHKIKE 263
Query: 276 TDAGRLRAEYNRLVEGL--ALRGNLPNAWLSNPALPSDILK 314
TD RLR EY+RLVEGL A +A L+NP LP ++L+
Sbjct: 264 TDEKRLREEYHRLVEGLREASLARETDAHLANPVLPDEVLQ 304
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 102/147 (69%), Gaps = 7/147 (4%)
Query: 366 DQKTLRFCYERLHSLMLTLEIT-DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP 424
D+K LR Y RL + + +TD L + D +GF+IIIEPFDER P
Sbjct: 265 DEKRLREEYHRLVEGLREASLARETDAHLANPVLPD------EVLQGFTIIIEPFDERTP 318
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
I +PVL SC DASLA+KPVF+RFQSV+ITSGTLSP+D+YP++L+FHPV +F M+L
Sbjct: 319 TIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 378
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSD 511
R C+CPM++ RG+DQ+ +S+KF+ R D
Sbjct: 379 RVCLCPMIVGRGNDQVAISSKFETRED 405
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 633 ARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
ARLE+LRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+MIFADKR++R DKR KLP
Sbjct: 414 ARLEFLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRFARADKRGKLP 473
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
WI HL DA+LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 474 RWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHR 509
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 36 GHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAEL 87
GH +LEMP+GTGKTI+LL+LI +Y + P KLIYC+RTV E+EK L
Sbjct: 101 GHGVLEMPSGTGKTISLLALIVAYQRAHPLEVTKLIYCSRTVPEIEKEFDAL 152
>gi|300176870|emb|CBK25439.2| unnamed protein product [Blastocystis hominis]
Length = 1177
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 185/832 (22%), Positives = 342/832 (41%), Gaps = 179/832 (21%)
Query: 3 FKLEDVTVYFPYDNI-YPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
++ + V FP D I + Q S M + ++L + ++E PTGTGKT+A+L S++
Sbjct: 46 YRFYGLEVEFPQDRIPFSSQKSTMTAIVKSLSRNENAIVESPTGTGKTLAILCSSLSWI- 104
Query: 62 SKPENPVK------------------------------------------LIYCTRTVHE 79
K P++ + YC+RT +
Sbjct: 105 -KSTQPIEATQPSEIPPVPEATQSSDYEAIDKLREKLRALNNSLTKQTHHIYYCSRTHSQ 163
Query: 80 MEKTLAELKLLH--NYQTRHLGPAAKILAI------------GLSSRKNLCVNSRVLAAE 125
+++ + ELK + Y R G A L + L+S+ + C+N VL
Sbjct: 164 LDQAIQELKRSNFLMYTHRSEGRIALSLPVLVTEQQRELSMTVLASKSHYCINKAVLENP 223
Query: 126 NRDSVDAAC-RKRTASWVRALAAENP-NIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
N SVD C +R +++ E ++ C+F E+ + A GV ++D++
Sbjct: 224 NF-SVDEICGHERELAFLSQGETEKSFDMNFCKF-RKQERIFACAKSIHGVLDIEDMKRL 281
Query: 184 GKQQGWCPY-----------FLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+++ CPY F+AR ++ + ++ Y Y++DP++ +S + K S++
Sbjct: 282 CQRKNVCPYVCRIRFRIDVKFVARELMTKSQIIFAPYNYVIDPQIRDSMSINLAKSSII- 340
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATR------NLSRINQE---------IERFKATD 277
FDEAHNI + ++++ + + T +L +I ++ +E + +T
Sbjct: 341 FDEAHNILTTARSSAGMTIKLREFQEKTNHFISFMSLLKIEKDNKYLSFTNLVELWNSTL 400
Query: 278 AGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY 337
RL G ++ L + + NP DI+ + + + ++ +
Sbjct: 401 NSHSDDSLFRLESGESMMNLLKSGFFQNP-YDLDIISKNI--------DLIDAWKKEIDQ 451
Query: 338 LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
+ + E + E+ +F+ A G+ R + ++T TD
Sbjct: 452 MTDQDELGDKER----NFIRHCLASMGV------LGVLRNLARVMTYLFTD--------- 492
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHI----------------PDPV---LQLSCHDA 438
G Y F ++IE + +P P+P L + C +A
Sbjct: 493 -------AGKYVSDFRLLIE---QALPSKSKSKSKFYSKFYSSTNPEPANVELSILCLNA 542
Query: 439 SLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN--FHPVVSRSFKMSLTRDCICPMVLTRG 496
++ + + S+V+TSGTL+P+ + LN F + + + R +V +
Sbjct: 543 AIVFEDIKSTCSSIVLTSGTLAPLSSFANELNIPFQNQMEGIASIDVHRQLFAAVVPSYH 602
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
+ L S + RS+P G +L++ V ++P G+V FF SYS +++ ++ W + +
Sbjct: 603 NVSLLGS--YQNRSNPLYMDAVGDVLLDCVQVIPAGVVFFFPSYSVLNQFLSYWKKTKFI 660
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACD--------------CGR---------GAV 593
+ Q K V+IE +D V + L NY D C GA+
Sbjct: 661 DRLSQIKQVYIEQRDAVGFSAVLTNYTTFMDNFCTFFPPFSRPDKCKERGIQPSSVTGAL 720
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ----IKEG-D 648
FF V RGK++EGIDF + R VI +P+ + + + EY+ Q +++G
Sbjct: 721 FFGVCRGKISEGIDFKDYMARAVISLSIPYPNSHAHEIRLMREYMDQQHQLNPNVQDGSS 780
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+ A R Q +GR IR DYG +I + R+ + + +L W +R
Sbjct: 781 WYDEQAFRALNQGLGRCIRHSRDYGAIILLESRFGNPEVKKRLSRWFRDEIR 832
>gi|399950025|gb|AFP65681.1| DNA repair helicase component of transcription factor b [Chroomonas
mesostigmatica CCMP1168]
Length = 759
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/660 (21%), Positives = 272/660 (41%), Gaps = 49/660 (7%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY- 59
M F ++++ VYFPY ++PEQ YM LK+ D K H + +P G G + +S SY
Sbjct: 1 MQFYVQNLCVYFPYKIVFPEQIQYMYILKKIFDKKKHGITGIPPGMGFCLTTISFFISYN 60
Query: 60 VLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILA---IGLSSRKNLC 116
SK + KLIYC R +E+E +A+ ++ + T + I+ + L + LC
Sbjct: 61 FFSKKKK--KLIYCLRRENEIECAIAQSEMFLSQFTVYSLEKDFIIKPSIMALYDKTKLC 118
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAEN--------------PNIETCEFFENYE 162
+N + D V+ C + + + E N C FF NY
Sbjct: 119 LNPIIKNDSILDEVEDFCHSLLSPYFFSKKKETFFPIEKKKETGIITNNESKCFFFTNYI 178
Query: 163 KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV-YSYQYLLDPKVAGII 221
+ G++T+ LR FG ++ +C +FL++ + +VV+ + YQ + +
Sbjct: 179 -HKRKKIFFKGIWTIFKLRNFGIKKNFCSFFLSKDIFVRCDVVISHIYQIFFSETFSSL- 236
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
+K++ S ++FD +++++ SV++ + R + + + + +
Sbjct: 237 NKKLTNCSFLIFDNIFDLESLNSLFFSVNIDPLVINDCQRGIFLLKKNF--YWSQKISIK 294
Query: 282 RAEYNRLVEGLALRGNL-----------PNAWLSNPALPSDILKEAVPGN-----IRRAE 325
+ +N L +L N + N + + N I+R
Sbjct: 295 KKNFNFFFIELFDSDSLFSDNIKKVVFWKNFFNKNKKRLNFFFNFSQQKNKKRRRIQRIF 354
Query: 326 HFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTL---RFCYERLHSLML 382
H L + ++V + + L +K P+ FV I + ++ L +L
Sbjct: 355 HNLETIEQIVFFFKEILTKTIFQKWDPIEFVNCFLKKFFIYETSITSINVLVNFLSNLFC 414
Query: 383 TLEITDTDEFLHIQTICDFATLVG----TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDA 438
L + + I +F L+ TY + F I + + P + +P L++ C +
Sbjct: 415 LLGFFNFRKMNGFSKILEFLKLIWINSETYNQNFIIFFSLENHKFPLLLEPCLEIICTET 474
Query: 439 SLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
L K F+ F SV+I S LS + +++ P + K ++ + +
Sbjct: 475 CLLFKSFFENFSSVIIISNNLSNLPFLFFIIDCKPKIFGKIKNFFEKNFLFSVFFNIKIS 534
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
L + Y L +++ +P+GIVC F S +++E + WN L +
Sbjct: 535 NLLNKMDKIKKKKENQNNKYSIFLNKIIENIPEGIVCIFPSKFHIEETLEEWNKEKFLNK 594
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
I + +F E D++E D Y+ CD G A+F S+ G +++ + H+ R ++
Sbjct: 595 IFKKTKIFFENADILENLFFFDQYKLCCDFGIKALFISIYGGFLSKA-NLSLHFSRAFLL 653
>gi|378731863|gb|EHY58322.1| chromosome transmission fidelity protein 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 839
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 168/678 (24%), Positives = 293/678 (43%), Gaps = 102/678 (15%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQT-----RHLGPAA----KILAIGLSSRKNL 115
EN +K+IYC+RT ++ + + EL+ + + +L P+ ++ + L SRKNL
Sbjct: 190 ENRLKIIYCSRTHSQLTQFVNELRRVKPPSSIPSAFDNLRPSTDLEERVKHLPLGSRKNL 249
Query: 116 CVNSRVLAAENRDSVDAACR--KRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG 173
C+N +V + +++ C ++ + P+ E + E++ A A +
Sbjct: 250 CINPKVARLSSTTAINEQCLELQKPGTAKDKKCPYLPSKEDRQRMESFRDKAIAQI---- 305
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++DL GK+ CPY+ +R + A V+ Y LL + + K+ V++
Sbjct: 306 -RDIEDLAHLGKRMDLCPYYASRSAITSAEVLTLPYPLLLQKSAREALGISV-KDDVIII 363
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHN+ + E S ++R L+ A + ++ RFK RL+ + NR+
Sbjct: 364 DEAHNLADAIAETFSAALRLSQLDQA---VHQVTAYAVRFK----NRLKGK-NRVYVTQV 415
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
LR L N++ +D L+ ++ H V Q + G+
Sbjct: 416 LR--LLNSF-------TDCLR-----SVGEKSHMKDVTVTASQLMSGK------------ 449
Query: 354 SFVASITAHAGIDQ----KTLRFCYERLHSLMLTLE-ITDTDEFLHIQTICDFATLVGTY 408
G+DQ K +R+ +E L +E T+ + + Q A + +
Sbjct: 450 ----------GVDQIRPHKLMRYLHE--SKLCHKVESYTEVQKSVEGQNQGKGALM--QF 495
Query: 409 TRGFSIIIEPFDER----MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
S+++ P DE + D + + D + V + ++V++ GT+SP+
Sbjct: 496 QNFLSLLMNPDDEGRFFVVRQDGDITVHYTLLDPREHFRDVVEDARAVILAGGTMSPMAD 555
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDM----RSDPGVARNYGK 520
Y L + R S + + Q P ++FD R + G
Sbjct: 556 YANYLFSYLDKDRLETFSFGHVVPSSHLFAQPVVQGPSGSEFDFTFEKRRSEQMILELGH 615
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG----ILKEIMQHKLVFIETQDVVETT 576
L+ IVPDG+V FF SY Y+ +++A W +L+ + + K+ F E++ V
Sbjct: 616 LVSRTCKIVPDGVVVFFPSYDYLAQVVAVWQKQPPALPLLQSLGKTKVTFQESKGVSVDE 675
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
L L +Y A D G+GA+ SV GK++EGI+F GR+VI G+PF A+++
Sbjct: 676 L-LRDYANAVDSGKGALLLSVVGGKLSEGINFSDKLGRVVIAVGLPFPNANGAEWKAKMQ 734
Query: 637 YL---------------RDTFQIKEG----DFLTFDALRQAAQCVGRVIRSKADYGMMIF 677
++ +QI+ DF +R Q +GRVIR + DY +I
Sbjct: 735 HVESLRYQQCRTESILPESQWQIEAKRASRDFYENACMRAINQSIGRVIRHRNDYAAIIM 794
Query: 678 ADKRYSRHDKRSKLPGWI 695
D+RY+ R+KLP WI
Sbjct: 795 VDRRYATDRIRTKLPKWI 812
>gi|410348520|gb|JAA40864.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348522|gb|JAA40865.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348524|gb|JAA40866.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 176/677 (25%), Positives = 280/677 (41%), Gaps = 74/677 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + Q +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYMEQYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------FLHIQT 397
+ G V AG Q + L M DE +HI+
Sbjct: 514 RYGAVFSSREQPKLAGFQQ-----FLQSLQPRMTEALAAPADESQASTPRPASPLMHIE- 567
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 568 --GFLAALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGG 621
Query: 458 TLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL VV S + D I P+V+ G P+ F R
Sbjct: 622 TMQPVSDFRQQLLACAGVEAEHVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKREL 681
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE--- 568
P + G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E
Sbjct: 682 PQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKS 741
Query: 569 TQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
V + LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 742 AHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 801
Query: 625 YTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFA 678
S L ++ YL T Q G L + ++ Q +GR IR + D+ ++
Sbjct: 802 NIRSAELQEKMTYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLL 861
Query: 679 DKRYSRHDKRSKLPGWI 695
D+RY+R +KLP WI
Sbjct: 862 DQRYARPPVLAKLPAWI 878
>gi|167384070|ref|XP_001736798.1| regulator of telomere elongation helicase 1 rtel1 [Entamoeba dispar
SAW760]
gi|165900684|gb|EDR26949.1| regulator of telomere elongation helicase 1 rtel1, putative
[Entamoeba dispar SAW760]
Length = 1030
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 184/746 (24%), Positives = 320/746 (42%), Gaps = 118/746 (15%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLI 71
FPY Y Q M +++A+ H L+E PTGTGKT+ LL L+ P+ ++++
Sbjct: 85 FPYQPPYQPQIEMMNSIQQAVKEGKHLLMESPTGTGKTLVLLH----STLTFPD--MRIV 138
Query: 72 YCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVD 131
Y +RT ++ + + E T+ +G I I L+SR C+ + + ++++
Sbjct: 139 YASRTHSQLAQVVNE--------TKKIG---DIKGIVLASRDLYCIYNPIRICDDKNY-- 185
Query: 132 AACRKRTASWVRALAAENPN-------IETCEF--FENYEKAASAAVLP--------PGV 174
W A PN I+ C + F N K V+ GV
Sbjct: 186 ---------WCTA----KPNVLETLKHIKPCPYRPFGNDGKVLPNVVMACQAVYKELNGV 232
Query: 175 YTLQD-LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAG------IISKEMQK 227
+QD L ++ CPY+ +R + + +++ Y ++ + I ++ +
Sbjct: 233 IKIQDDLVKVCQKHNLCPYYYSRWATKRSKLILCPYNFVTSVSIRHSSDIFLIDENDIHR 292
Query: 228 -ESVVVFDEAHNIDNVCIEALSVS----VRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
E V+V DEAHN+++ +++L+ + + +T+E + RI Q E F++ L
Sbjct: 293 HEFVLVMDEAHNVEDAFMDSLTFTFTETLLNRTIETIQFHQKRIKQTPENFRSFS---LL 349
Query: 283 AEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRL 342
E +E ++ W+ N +LP ++ + G + + FL + R RL
Sbjct: 350 GELISTIESFSI-------WMENRSLPFKDSEQCLYG-VFEDQAFLPFIERSPS--STRL 399
Query: 343 ETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFA 402
E V + + + + F + + ++ +++ T +
Sbjct: 400 TEAIFEYIKLVDNLDDLIQEPHLIRYVNPFTTQYIEMVLFYIQVFRTPKL---------- 449
Query: 403 TLVGTYTRGFSIII-EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSP 461
T+ F III E D R + C SL + + +SV+ SGTLSP
Sbjct: 450 ------TKFFKIIITERNDLRE-------MLFRCLSPSLPMSLLQREVRSVIFASGTLSP 496
Query: 462 IDLYPRLLNFHP------VVSRSFKMSLTRDCICPM-VLTR--GSDQLPVSTKFDMRS-- 510
+ + LN ++S ++M T+ + P V R GS S F ++
Sbjct: 497 MKAMAQELNIKEHLYKNIIISPGYRMLSTQHVVPPSHVFGRVIGSSSFGKSFIFTKKTSQ 556
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ 570
D + G + ++S P G + FF SYS ++ ++ W G+ ++ + K +FIE++
Sbjct: 557 DNEMIEQAGNTMFRVLSKSPGGGLVFFASYSMLNRVVELWKQQGVYTQLNKLKAIFIESK 616
Query: 571 DVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
D E Y+ G AVF V RGK++EGIDF R+VI+ G+P+ +L I
Sbjct: 617 DKNEFKKDFKEYQILSKTG--AVFLGVFRGKLSEGIDFGDDMARVVIIVGIPYP-SLGDI 673
Query: 631 LLA------RLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 684
+ E L++ + ++ + ALR Q VGRVIR DYG + DKRYS
Sbjct: 674 NVNLKRDYNNQENLKNPDCLSGSEWYSIQALRAVNQAVGRVIRHINDYGAFLLLDKRYST 733
Query: 685 HDKRSKLPGWILSHLRDAHLNLSTDM 710
+ + L GW+ L A N D+
Sbjct: 734 NPVKEMLSGWMKKSLVIADKNWEQDL 759
>gi|332839865|ref|XP_520821.3| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4 [Pan
troglodytes]
Length = 880
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 176/677 (25%), Positives = 280/677 (41%), Gaps = 74/677 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 201 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 252
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 253 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 312
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 313 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 371
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + Q +R KA + L+ L + +A L G
Sbjct: 372 LIDTITGMHSVEVSGSQLCQAHSQLLQYMEQYGKRLKAKNLMYLKQILYLLEKFVAVLGG 431
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 432 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 487
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------FLHIQT 397
+ G V AG Q + L M DE +HI+
Sbjct: 488 RYGAVFSSREQPKLAGFQQ-----FLQSLQPRMTEALAAPADESQASTPRPASPLMHIE- 541
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 542 --GFLAALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGG 595
Query: 458 TLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL VV S + D I P+V+ G P+ F R
Sbjct: 596 TMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKREL 655
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE--- 568
P + G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E
Sbjct: 656 PQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKS 715
Query: 569 TQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
V + LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 716 AHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 775
Query: 625 YTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFA 678
S L ++ YL T Q G L + ++ Q +GR IR + D+ ++
Sbjct: 776 NIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLL 835
Query: 679 DKRYSRHDKRSKLPGWI 695
D+RY+R +KLP WI
Sbjct: 836 DQRYARPPVLAKLPAWI 852
>gi|121799524|sp|Q2U587.1|CHL1_ASPOR RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|83773151|dbj|BAE63278.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 721
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 180/749 (24%), Positives = 309/749 (41%), Gaps = 135/749 (18%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTG--TGKTIALLSLITSYVLSKPENP- 67
Y PYD Q +M L ++ + E PTG G + L L+ + +P
Sbjct: 12 YSPYDI----QLQFMRALYSCIEKGKVAVFESPTGKLAGLSTGTLELLKRFQHKSSAHPR 67
Query: 68 ---------VKLIYCTRTVHEMEKTLAELKLLHN------------YQTRHLGPAAKILA 106
+K++YC+RT ++ + +EL+ ++ T L + L+
Sbjct: 68 QDEDYGDEDIKILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTDGLQEGVRHLS 127
Query: 107 IGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAAS 166
+G SRKNLC+N RV + +N ++ C V AAE + C F + E A
Sbjct: 128 LG--SRKNLCINPRVSSLDNVTAISERCLDMQQPGV---AAE----QRCPFLPSNENEAQ 178
Query: 167 AAVLPPGVYT----LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIIS 222
V ++D+ GK G CPY+ +R + + + +V Y LL +
Sbjct: 179 VLQFRDHVLATVKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALD 238
Query: 223 KEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
+ K VVV DEAHN+ + SV++ TL +L ++ +FK G+ R
Sbjct: 239 LSI-KGHVVVIDEAHNLMDAISNIHSVTI---TLSELQTSLFQLTTYARKFKTRLKGKNR 294
Query: 283 ---AEYNRLVEGLA--LRGNLPNAWL-SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQ 336
A+ RLV + L+ L + P PSD++ I +L +
Sbjct: 295 NYIAQVIRLVTSITDHLKTILETSQAPEGPVQPSDLMSGKGVDQINPY--------KLCR 346
Query: 337 YLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL-EITDTDEFLHI 395
YLR E++ K S + A D+K + S +L L ++ + +I
Sbjct: 347 YLR---ESKLARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLMNLSAEGKLFYI 403
Query: 396 QTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVIT 455
+ D ++++P ++ + + D ++V++
Sbjct: 404 KAQGDIQLKY--------MLLDPMNQ--------------------FREIVDDARAVILA 435
Query: 456 SGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMR 509
GT+SP+ Y + + P V S + + + P VL +G T+FD
Sbjct: 436 GGTMSPMTDY--IHHLFPYVPSSRLGTFSYGHVIPPENLIAQVLGKGV----TGTEFDFT 489
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN-------DSGILKEIMQH 562
+ R+ ++ ++PDG+V FF SY Y+ ++++ W + + I
Sbjct: 490 FE---TRDSERM------VIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGK 540
Query: 563 KLVFIETQDV-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
K + E++DV + T L Y GRGA+ SV GK++EGI+F GR V++ G+
Sbjct: 541 KTILHESRDVTISTEELLQEYASIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGL 600
Query: 622 PFQYTLSKILLARLEYL-RDTFQIKEG--------------DFLTFDALRQAAQCVGRVI 666
PF S + A++ Y+ + ++ G DF +R QC+GR I
Sbjct: 601 PFPNIRSAVWQAKIHYVEQKAYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAI 660
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R + DY ++ D+RY + + KLP WI
Sbjct: 661 RHRNDYAAIVLMDRRYDKPAIQGKLPAWI 689
>gi|358390776|gb|EHK40181.1| hypothetical protein TRIATDRAFT_296192 [Trichoderma atroviride IMI
206040]
Length = 871
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 170/694 (24%), Positives = 290/694 (41%), Gaps = 103/694 (14%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK--LLHNYQTRHLGPAAKILA------IGLSSRKNLC 116
E +K+ Y +RT ++ + + EL+ + + + + I + + LSSR+ LC
Sbjct: 201 EEKIKIYYTSRTHSQLSQFITELRRPVFPSSLPTSVAKGSDIPSTEPVKLLPLSSRQKLC 260
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+N V + +++ C + + + P E + + ++ A LP
Sbjct: 261 INPSVARLGSVQAINDRCTELQQARSSTKCSFAPKEELLSQTHQF-RDSTLATLP----D 315
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++DL GK CPY+ +R ++ A ++ Y LL + +++ +VV+ DEA
Sbjct: 316 IEDLHQLGKSLSVCPYYASRGVLPGAEIITLPYPLLLQQSAREALGIKLEG-NVVIIDEA 374
Query: 237 HNI----DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
HNI NV L +S R+ + + R ++++ + GR+ R+++GL
Sbjct: 375 HNILDAISNVHAAELQLSDLRRGRQMLGVYVKRFGKKLKGINRVNVGRV----GRVIDGL 430
Query: 293 ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV-LRRLVQYLRGRLETENVEKEG 351
WL D P ++ R + + + L+QY++ +E
Sbjct: 431 -------TEWLEGALKLKDEHGIVDPNDLTRHKGIDQINVYELIQYIQESKLAYKIE--- 480
Query: 352 PVSFVASI-TAHAGIDQKTLRFCYERLHSLMLTL----EITDTDEFLHIQTICDFATLVG 406
S+VA + G L+ LH+L+ L ++ + +T A +
Sbjct: 481 --SYVAHVENDEEGKKSGPLKAGSPVLHALVSFLIALTNLSSEGRIFYQKTHGAAADVKL 538
Query: 407 TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID--- 463
TY +++ P + A + ++V++ GT+SP
Sbjct: 539 TY-----LLLSP--------------------THAFSSIVSSARAVILAGGTMSPFQDYK 573
Query: 464 --LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG-SDQLPVSTKFDMRSDPGVARNYGK 520
L+P L+ V S S + R+ +C L P F R + + G
Sbjct: 574 DQLFP-TLDSTKVTSLSCGHVIPRENLCVWTLASSHPGSPPFEFSFKQRGNRDMMNQLGL 632
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHKLVFIETQDVVE 574
++ + +IVPDG+V FF SYSY+DEII W N I + K+V+ +T+
Sbjct: 633 SILNVCNIVPDGVVVFFPSYSYLDEIIKIWQQPQSGNSHPIWDRLQLRKMVYRDTKGESS 692
Query: 575 TTLALD------NYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+ D R A D GA+ SV GK++EGI+F GR VI+ G+P+ S
Sbjct: 693 DDVLRDYSQMILGARAAGDTRTGALLLSVVGGKMSEGINFSDRLGRCVIVIGLPYPNIAS 752
Query: 629 KILLARLEYLRDTFQ---IKEG---------------DFLTFDALRQAAQCVGRVIRSKA 670
A++EY+ T + IKEG DF +R Q +GR IR +
Sbjct: 753 PDWKAKIEYIESTTEERLIKEGQSKSEATAQAKQAARDFYENACMRAVNQSIGRAIRHRG 812
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHL-RDAH 703
DY +I D+RY R KLPGWI L +D+H
Sbjct: 813 DYAAIILVDRRYGTGRIRGKLPGWIRDGLEKDSH 846
>gi|46126959|ref|XP_388033.1| hypothetical protein FG07857.1 [Gibberella zeae PH-1]
Length = 863
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 165/691 (23%), Positives = 289/691 (41%), Gaps = 104/691 (15%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK-------LLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
E P+K+ Y +RT ++ + + EL+ L + + + + LSSR+ LC+
Sbjct: 203 EEPIKIYYTSRTHSQLSQFITELRRPSFPPSLPTSLSKQEETKTEAVKLLPLSSRQRLCI 262
Query: 118 NSRVLAAENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG 173
N V + +++ C + ++ + E+ +T +F + ++ A LP
Sbjct: 263 NPSVSRLGSVQAINDRCSELQQPKSGQKCPFVPKEDLLSQTHQF-----RDSALATLP-- 315
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++DL GK CPY+ +R + A ++ Y LL + +++ S+V+
Sbjct: 316 --DIEDLHQLGKSLAVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEG-SIVIV 372
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLS----RINQEIERFKATDAGRLRAEYNRLV 289
DEAHNI + + ++ L L R ++++ + GR+ R++
Sbjct: 373 DEAHNIMDAVANVHAAEIKLSDLRRGRGMLGVYVKRFGKKLKGVNRVNVGRV----ARVI 428
Query: 290 EGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV-LRRLVQYLRGRLETENVE 348
+GL+ W+ P ++ R++ + + L+QY++ +E
Sbjct: 429 DGLS-------EWMDGALKFKQEHGIVDPNDLTRSKGIDQINMFELIQYIQDSKLAFKIE 481
Query: 349 KEGPVSFVASITAH-AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
S+++ + + AG KT R LHSL+ FL L
Sbjct: 482 -----SYISHVESEDAGT--KTPRSSTPVLHSLV---------SFL--------IALTNL 517
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID---- 463
+ G F +++ PD L + A + ++V++ GT+SP D
Sbjct: 518 SSEG-----RIFYQKIKGTPDIQLSYLLLSPTHAFSSIASSARAVILAGGTMSPFDDYKD 572
Query: 464 -LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLP-VSTKFDMRSDPGVARNYGKL 521
L+P L V + S + + +C L P F R DP + G
Sbjct: 573 HLFPSL-EPEKVTTLSCGHVIPPENLCVWTLASSRPGAPPFEFSFQKRGDPEMITQLGLA 631
Query: 522 LVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS------GILKEIMQHKLVFIETQDVVET 575
++ + S+VPDG+V FF SY Y+DE++A W S + + K +F ET+
Sbjct: 632 ILNLCSLVPDGVVIFFPSYGYLDEVVAVWQKSQGASTQSVWDRLGTRKALFKETRGASSE 691
Query: 576 TLALDNYRKACDC----GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
+ L Y A G+GA+ SV GK++EGI+F GR V++ G+P+ S
Sbjct: 692 EV-LQEYSDAIQGEKSNGKGALLLSVVGGKMSEGINFSDRLGRCVLVIGLPYPNIASPDW 750
Query: 632 LARLEYLRDTFQ---IKEG---------------DFLTFDALRQAAQCVGRVIRSKADYG 673
A++EY+ T + + +G DF +R Q +GR IR + DY
Sbjct: 751 KAKIEYIETTTRNNLVAQGTTHEEAVSKAKQTARDFYENACMRAVNQSIGRAIRHRGDYA 810
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHL-RDAH 703
++ D+RY R KLPGWI L D+H
Sbjct: 811 AIVLVDRRYGTDRIRGKLPGWIRGGLVGDSH 841
>gi|332839861|ref|XP_003313865.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1 [Pan
troglodytes]
gi|410258634|gb|JAA17284.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410301530|gb|JAA29365.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 176/677 (25%), Positives = 281/677 (41%), Gaps = 74/677 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + Q +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYMEQYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------FLHIQT 397
+ G V AG Q + L M DE +HI+
Sbjct: 514 RYGAVFSSREQPKLAGFQQ-----FLQSLQPRMTEALAAPADESQASTPRPASPLMHIE- 567
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 568 --GFLAALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGG 621
Query: 458 TLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL VV S + D I P+V+ G P+ F R
Sbjct: 622 TMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKREL 681
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ- 570
P + G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E +
Sbjct: 682 PQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKS 741
Query: 571 --DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
V + LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 742 AHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 801
Query: 625 YTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFA 678
S L ++ YL T Q G L + ++ Q +GR IR + D+ ++
Sbjct: 802 NIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLL 861
Query: 679 DKRYSRHDKRSKLPGWI 695
D+RY+R +KLP WI
Sbjct: 862 DQRYARPPVLAKLPAWI 878
>gi|406865719|gb|EKD18760.1| putative ATP-dependent RNA helicase chl1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 894
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 170/713 (23%), Positives = 296/713 (41%), Gaps = 128/713 (17%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLH---NYQTRHLGPA--AKILAIGLSSRKNLCVNSRVL 122
K+ YC+RT ++ + + EL+ ++ + + ++ P+ + + L SRKNLC+N +V
Sbjct: 203 TKIFYCSRTHSQLTQFINELRRVNFPPSIKDENIKPSDIEDLKHLTLGSRKNLCINPKVN 262
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP----PGVYTLQ 178
+ +V+ C + + P C F N E + ++
Sbjct: 263 KLNSLTAVNERCAELQQT-------STPKEHKCVFLPNKENQTLVNTFRDRSLATIRDIE 315
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
D+ GKQ G CPY+ +R ++ A +V Y LL + + K VV+ DEAHN
Sbjct: 316 DMGDLGKQIGICPYYASRSAIRPAEIVTLPYPLLLQKSAREALGISL-KGHVVIIDEAHN 374
Query: 239 IDNVC--IEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGLA 293
+ + I + VS+R+ R +++ +++F+ G+ R A+ R+++ L
Sbjct: 375 LMDAISGIHGVEVSLRQ-----LKRGRAQLGVYLQKFRNRLKGKNRVYIAQVVRVIDSLT 429
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
+L + R A LHV + YL R + E EK +
Sbjct: 430 -------GYLES----------------RLA---LHVSETPL-YLSFRADLE--EKSDGI 460
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
+ + G+DQ L L L ++ E + T D +T T + S
Sbjct: 461 VSDKELLSGKGVDQINLFKLVHYLQESKLARKV----ESYALYTETDTSTTAKTSEQSKS 516
Query: 414 I------------IIEPFDERM--------PHIPDPV-LQLSCHDASLAVKPVFDRFQSV 452
+ P E P PD + L+ D + + + ++V
Sbjct: 517 TPVLHQISSLLLALTHPSKEGRLFYALSPNPASPDLINLKFLLLDPAPHFQAIVSEARAV 576
Query: 453 VITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDM 508
++ GT+SP+ D L + P + + S + ++ + L+RG F
Sbjct: 577 ILAGGTMSPMSDYTSHLFPYLPPAGITTLSCGHVIPKENLLAWNLSRGPTGQEFDFTFKN 636
Query: 509 RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQH 562
R + + + G+ L+ + ++VPDG+V FF SYSY+ I++ W + +L+ +
Sbjct: 637 RGNNDMIDDLGRALLNICTVVPDGVVVFFPSYSYLSSIVSRWEVIPGQDQKSLLQRLEGK 696
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
K++F E+++ T+ L+ Y KA D GRG + SV GK++EGI+F GR V++ G+P
Sbjct: 697 KVLFKESKEQSVDTV-LNEYAKAIDTGRGGLLLSVVGGKMSEGINFSDSLGRCVVIVGLP 755
Query: 623 FQYTLSKILLARLEYLRDTF-------------------------------QIKEG---- 647
F S A+++Y+ + I G
Sbjct: 756 FPNINSAEWRAKIQYIESSIVERLEAEGLAGSGCTSTNQHIDGKLKLSKEEMITRGKGEA 815
Query: 648 -DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+F +R Q VGR IR + DY ++ DKR+ R KLPGWI L
Sbjct: 816 REFYENACMRAVNQSVGRAIRHRGDYAAIVMIDKRFEGQKIRGKLPGWIREGL 868
>gi|100913202|ref|NP_085911.2| probable ATP-dependent RNA helicase DDX11 isoform 1 [Homo sapiens]
Length = 906
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 173/672 (25%), Positives = 280/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQTICDFA 402
+ G V AG Q +L + + +HIQ F
Sbjct: 514 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQ---GFL 570
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 571 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 687 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 746
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 807 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYA 866
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 867 RPPVLAKLPAWI 878
>gi|297842871|ref|XP_002889317.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
gi|297335158|gb|EFH65576.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
Length = 1016
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 174/761 (22%), Positives = 316/761 (41%), Gaps = 124/761 (16%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+ + + V FP++ Y Q YM + +L K H LLE PTGTGKT+ LL ++
Sbjct: 36 YSIRGINVDFPFE-AYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWRKS 94
Query: 60 ----------------------VLSKPENPV-KLIYCTRTVHEMEKTLAELKLLHNYQTR 96
++S+ +IY +RT ++ + + ELK +Y+ +
Sbjct: 95 LGSFSTRKDRKNCSIPWSDSDDLMSQSGGAFPTIIYASRTHSQLRQVIKELKRC-SYRPK 153
Query: 97 HLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAENPNIE 153
+ L SR+ LCVN V + + +A C+KR
Sbjct: 154 ---------MVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGK-------------R 191
Query: 154 TCEFFE---NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQ 210
C F +Y K + P ++DL GK G CPY++ R + + +++ Y
Sbjct: 192 QCNHFNRIPDYLKHNTHIGDEP--LDIEDLVNIGKDSGPCPYYITRELHKDVDIIFAPYN 249
Query: 211 YLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ-E 269
YL+ + K SV++FDEAHN++++C ++ S + L Q
Sbjct: 250 YLISNGYRKFL-KVNWNNSVLIFDEAHNLESLCADSASFDLPSVLLSACISEAQECVQLA 308
Query: 270 IERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLH 329
R + + + E +++GL L+ L I K +P +R E F
Sbjct: 309 AARRNSLNDVSINPENFAILKGLLLK------------LQELISKVPIP---KRDEGFT- 352
Query: 330 VLRRLVQYLRGRLETENVEKEGPVSFVASI-TAHAGIDQKTLRFCYERLHSLMLTLEITD 388
+ Y+ L++ N+ E + ++ A ++++ R T
Sbjct: 353 ---KPGPYIYEMLKSLNITHETAPKLIGTVEEAAVFLEEEKQR---------------TA 394
Query: 389 TDEFLHIQTICDFATLV-----GTYTRGFSIIIEPFDER----MPHIPDPVLQLSCHDAS 439
T+ ++ I D L+ + + + ++ ++ M L C
Sbjct: 395 TNAGSKLEIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPG 454
Query: 440 LAVKPVFDRFQSVVI-TSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
+ + + + +I TSGTLSP+D + L V ++ + + V++ G
Sbjct: 455 ITMLDIAKKGVGSIILTSGTLSPMDSLAQELKLDFPVRLENPHVISSNQLWAGVVSTGPS 514
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------ND 552
+++ + R P + G +V +VP+G++ FF SY MD I+ W N
Sbjct: 515 GYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCISFWKNGCHRNS 574
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDR 610
+ + I + K IE +D A+ ++ + G VFF+V RGKV+EG+DF
Sbjct: 575 MTVWERICKLKKPVIEPKDSSLFPAAMQDFSEKLQDRSTSGVVFFAVCRGKVSEGLDFAD 634
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE-----------GDFLTFDALRQAA 659
GR V++ G+P+ ++ + E+L + Q+ + + + +A R
Sbjct: 635 GAGRAVVITGLPYARVTDPRVILKREFLDEQSQLADVKLPRSTLLSGSMWYSQEAARAVN 694
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG +IF D R+ + ++SK+ WI +++
Sbjct: 695 QAIGRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVK 735
>gi|340717629|ref|XP_003397282.1| PREDICTED: Fanconi anemia group J protein homolog [Bombus
terrestris]
Length = 976
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 172/693 (24%), Positives = 296/693 (42%), Gaps = 96/693 (13%)
Query: 72 YCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVD 131
Y TRT ++E+ + EL+ RH K + I LSSR++ C+ E +
Sbjct: 334 YGTRTHKQIEQVVRELR---KTSYRH-----KKMTI-LSSREHTCIQ------ETTKNKT 378
Query: 132 AACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP------GVYTLQDLRAFGK 185
C + N + C F+ K A ++ ++DL A GK
Sbjct: 379 ELCND---------LLDTQNHKGCPFYNESNKKIIATFRGAKSRGLDDIWDIEDLVAIGK 429
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE---SVVVFDEAHNIDNV 242
+G CPYF AR +++ A+++ Y Y++DP I + MQ + V++ DEAHNI+++
Sbjct: 430 NEGLCPYFAARSLMEHADIIFCPYNYIVDPD----IRESMQLDVAGHVIILDEAHNIEDI 485
Query: 243 CIEALSVSVRRQTLEG-ATRNLSRINQEIERFKATDA---GRLRAEYNRLVEGLAL---- 294
C E SVS R L AT S + Q +A D+ G L+ +LV L
Sbjct: 486 CREVASVSFREDHLTAVATECESLMKQ-----RAADSEIYGTLQTYSLKLVNFLKTTVVD 540
Query: 295 RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
+ + LS+P L E N + L + N KE
Sbjct: 541 KVGYNSDNLSSPYWTGAELLELFNMNGLNEAMYTSFL----GACNAAIADSNRAKEERRI 596
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF-ATLVGTYTRGFS 413
F + K L + LM T+ + + E+++ DF A + T + F
Sbjct: 597 FQKVLQPVISPTTKKL------IEQLMFTIRMITSSEYMN-----DFRACITETTVKDFK 645
Query: 414 IIIEP--FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
E ++ L+L C + + P+ + +S+++ SGTLSP +F
Sbjct: 646 YATENTWLSSKVCTQRVRTLKLLCMNPGVTFAPLARQARSIILASGTLSPT------ASF 699
Query: 472 HPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
+ SF L + P + + +G +++ + + + G +L+++
Sbjct: 700 QSELGTSFAHVLNTGHVIPKEQVYAICIPQGPNEVKLRANYQSVNSWAFQDELGAVLLDV 759
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK- 584
VP GI+CFF SY+ M + W ++ I +I K +FIE + + + YR+
Sbjct: 760 CESVPHGILCFFSSYNVMHTQMQRWINNSIWTKITSVKQIFIEPRHGGDLKDIMYEYRQV 819
Query: 585 ---ACDCGRG----AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
D RG A+F +V RGKVAEGIDF + R VI G+P+ ++ +L Y
Sbjct: 820 IEQTSDKQRGKITGALFLAVFRGKVAEGIDFKDNEARCVITVGIPYAVRKDPVIDMKLSY 879
Query: 638 LRDTFQIKEG-----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
+ +K G ++ + A R Q +GR +R D+G ++ D+R+ H+ + LP
Sbjct: 880 --NDMNVKRGLLKGSEWYSIQAFRALNQALGRCLRHINDWGAVLLVDERFLMHENKENLP 937
Query: 693 GWILSHLRDAH-LNLSTDMALHIAREFLRKMAQ 724
W+ + + + NL ++ ++++ R+ Q
Sbjct: 938 KWVKTMWVNQNGYNLRENLKDFVSKQKAREEKQ 970
>gi|239613258|gb|EEQ90245.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ER-3]
gi|327357445|gb|EGE86302.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ATCC
18188]
Length = 851
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 169/734 (23%), Positives = 321/734 (43%), Gaps = 132/734 (17%)
Query: 46 TGKTIALLSLITSYVLSK-----PENPVKLIYCTRTVHEMEKTLAELKLLH--------- 91
+ T+ALL ++ +S+ P++ +++ YC+RT ++ + EL+ +
Sbjct: 139 SADTLALLEKLSGDPVSRSADCEPDDEIQVFYCSRTHSQLTQFAHELRRVKLPPSVPPEV 198
Query: 92 ----------NYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAAC----RKR 137
++ L + K L++G SRK LC+N +V A N +++ C R
Sbjct: 199 DDHDATADSASHPDDTLEESMKHLSLG--SRKTLCINPKVRALGNSTAINERCLEIQRPE 256
Query: 138 TASWVRALAAENPNIET-CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLAR 196
T + R N ET F ++ A V ++D+ G + G CPY+ +R
Sbjct: 257 TLAEQRCQFVLNKENETLVNDFRDHTLAK--------VRDIEDIGKIGSKIGVCPYYASR 308
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
+++++ +V Y LL ++ + K VV+ DEAHN+ + S+S+ +
Sbjct: 309 SIIKYSEIVTLPYPLLLQRSAREALNISL-KNHVVIIDEAHNLMDAISNIHSMSLSLTQV 367
Query: 257 EGATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGLA--LRGNLPNAWLSNPAL-PS 310
+ A L+ + ++K +GR R + RLV ++ L+ L + L PS
Sbjct: 368 QLAIYQLTTYAR---KYKTRLSGRNRVYVTQVIRLVNSISDYLKTVLERKQPTEGVLQPS 424
Query: 311 DIL--KEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQK 368
DI+ K N + +LH RL + + G +E ++E + T + Q
Sbjct: 425 DIMTGKGVDQINPHKLSRYLHE-SRLARKVDGFIEKSSMESQA--------TTDKKVTQL 475
Query: 369 TLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPD 428
++ ++ + S +++L ++ L + + D
Sbjct: 476 SVPVLFQ-VQSFLISLMNPSSEGKLFYEISQN---------------------------D 507
Query: 429 PVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----LYPRLLNFHPVVSRSFKMSL 483
+L+ D + + + + ++V++ GT+SP+D L+P LN + + S+ +
Sbjct: 508 VLLKYMLLDPTNHFREIVEDARAVILAGGTMSPMDDYVEHLFP-YLNADRLKTFSYGHVI 566
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
D + + +++G+ + R+D + + G+ + + ++PDG+V FF SY Y+
Sbjct: 567 PPDNLTAIPVSKGAFNTEFDFTYGKRNDENMIIDLGRTIAALCRVIPDGVVVFFPSYDYL 626
Query: 544 DEIIATWND------SGILKEIMQHKLVFIETQDVVETTLA-LDNYRKACDCGR--GAVF 594
++++ W S I+ I + K+VF E+QD L +Y A + G GA+
Sbjct: 627 NQVLVIWKKQAPNTRSNIIDSIEKSKVVFHESQDKTTNIDGLLQDYSSAINGGSRGGALL 686
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF------------ 642
SV GK++EGI+F GR VI+ G+PF S + A+++Y+
Sbjct: 687 LSVMGGKLSEGINFSDKLGRGVIVVGLPFPNIRSAVWQAKIQYVEHKAYESASPLSSSLD 746
Query: 643 QIKEGDFLTFDA-----------------LRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
Q ++G + ++ +R QC+GR IR + DY ++ D+RY
Sbjct: 747 QDRKGQGFSEESRKLKAKAAGRVFYENACMRTVNQCIGRAIRHQGDYAAILMMDRRYGSP 806
Query: 686 DKRSKLPGWILSHL 699
+SKLP WI +L
Sbjct: 807 RIQSKLPNWIRQNL 820
>gi|261188545|ref|XP_002620687.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis SLH14081]
gi|239593171|gb|EEQ75752.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis SLH14081]
Length = 851
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 169/734 (23%), Positives = 321/734 (43%), Gaps = 132/734 (17%)
Query: 46 TGKTIALLSLITSYVLSK-----PENPVKLIYCTRTVHEMEKTLAELKLLH--------- 91
+ T+ALL ++ +S+ P++ +++ YC+RT ++ + EL+ +
Sbjct: 139 SADTLALLEKLSGDPVSRSADCEPDDEIQVFYCSRTHSQLTQFAHELRRVKLPPSVPPEV 198
Query: 92 ----------NYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAAC----RKR 137
++ L + K L++G SRK LC+N +V A N +++ C R
Sbjct: 199 DDHDATADSASHPDDTLEESMKHLSLG--SRKTLCINPKVRALGNSTAINERCLEIQRPE 256
Query: 138 TASWVRALAAENPNIET-CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLAR 196
T + R N ET F ++ A V ++D+ G + G CPY+ +R
Sbjct: 257 TLAEQRCQFVLNKENETLVNDFRDHTLAK--------VRDIEDIGKIGSKIGVCPYYASR 308
Query: 197 HMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
+++++ +V Y LL ++ + K VV+ DEAHN+ + S+S+ +
Sbjct: 309 SIIKYSEIVTLPYPLLLQRSAREALNISL-KNHVVIIDEAHNLMDAISNIHSMSLSLTQV 367
Query: 257 EGATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGLA--LRGNLPNAWLSNPAL-PS 310
+ A L+ + ++K +GR R + RLV ++ L+ L + L PS
Sbjct: 368 QLAIYQLTTYAR---KYKTRLSGRNRVYVTQVIRLVNSISDYLKTVLERKQPTEGVLQPS 424
Query: 311 DIL--KEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQK 368
DI+ K N + +LH RL + + G +E ++E + T + Q
Sbjct: 425 DIMTGKGVDQINPHKLSRYLHE-SRLARKVDGFIEKSSMESQA--------TTDKKVTQL 475
Query: 369 TLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPD 428
++ ++ + S +++L ++ L + + D
Sbjct: 476 SVPVLFQ-VQSFLISLMNPSSEGKLFYEISQN---------------------------D 507
Query: 429 PVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----LYPRLLNFHPVVSRSFKMSL 483
+L+ D + + + + ++V++ GT+SP+D L+P LN + + S+ +
Sbjct: 508 VLLKYMLLDPTNHFREIVEDARAVILAGGTMSPMDDYVEHLFP-YLNADRLKTFSYGHVI 566
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
D + + +++G+ + R+D + + G+ + + ++PDG+V FF SY Y+
Sbjct: 567 PPDNLTAIPVSKGAFNTEFDFTYGKRNDENMIIDLGRTIAALCRVIPDGVVVFFPSYDYL 626
Query: 544 DEIIATWND------SGILKEIMQHKLVFIETQDVVETTLA-LDNYRKACDCGR--GAVF 594
++++ W S I+ I + K+VF E+QD L +Y A + G GA+
Sbjct: 627 NQVLVIWKKQAPNTRSNIIDSIEKSKVVFHESQDKTTNIDGLLQDYSSAINGGSRGGALL 686
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF------------ 642
SV GK++EGI+F GR VI+ G+PF S + A+++Y+
Sbjct: 687 LSVMGGKLSEGINFSDKLGRGVIVVGLPFPNIRSAVWQAKIQYVEHKAYESASPLSSSLD 746
Query: 643 QIKEGDFLTFDA-----------------LRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
Q ++G + ++ +R QC+GR IR + DY ++ D+RY
Sbjct: 747 QDRKGQGFSEESRKLKAKAAGRVFYENACMRTVNQCIGRAIRHQGDYAAILMMDRRYGSP 806
Query: 686 DKRSKLPGWILSHL 699
+SKLP WI +L
Sbjct: 807 RIQSKLPNWIRQNL 820
>gi|380420358|ref|NP_001244074.1| probable ATP-dependent RNA helicase DDX11 isoform 4 [Homo sapiens]
gi|29476793|gb|AAH50069.1| DDX11 protein [Homo sapiens]
Length = 880
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 173/672 (25%), Positives = 280/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 201 TKIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 252
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 253 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 312
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 313 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 371
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 372 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 431
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 432 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 487
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQTICDFA 402
+ G V AG Q +L + + +HIQ F
Sbjct: 488 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQ---GFL 544
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 545 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 600
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 601 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 660
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 661 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 720
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 721 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 780
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 781 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYA 840
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 841 RPPVLAKLPAWI 852
>gi|206558225|sp|A5DNW6.2|CHL1_PICGU RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|190348421|gb|EDK40869.2| hypothetical protein PGUG_04967 [Meyerozyma guilliermondii ATCC
6260]
Length = 825
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 170/690 (24%), Positives = 301/690 (43%), Gaps = 106/690 (15%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
PV + + +RT ++ + +L + ++++ A +I + LSSRK LC++ +V + +
Sbjct: 197 PVTIFFSSRTHSQLSQFAHQLSIT-SFESSLGEIAERIKFMPLSSRKQLCIHPKVSSLSS 255
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP-------PGVYTLQD 179
+V+ AC + + + + CEF S ++ + +++
Sbjct: 256 VSAVNDAC----------VELQQKSDKRCEFMPRVNNPESDQLVQRFADYSFAVIKDIEE 305
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G CPY+ +R ++ + ++ YQ LL + + K+S+V+ DEAHN+
Sbjct: 306 LHELGADLKVCPYYASRRNIENSEIIALPYQMLLQQATRKSLGLSI-KDSIVIIDEAHNL 364
Query: 240 DNVCIEALSVSVRRQTLEGATRNLS-RINQEIERFKATDAGRLRAEYNRLVEGLAL-RGN 297
+V SVS+ R+ L +L N+ +R + + R +L++ +L
Sbjct: 365 LDVISSINSVSITRKELSSVIASLKLYYNKFTKRLNSGN----RIHLMKLIKLCSLVETY 420
Query: 298 LPNAWLSNPALP-SDIL-KEAVPG------NIRRAEHFL---HVLRRLVQYL-RGRLETE 345
+ N + N +P SD+L E G NI R E +L + ++ Y+ + R E++
Sbjct: 421 IKNCEIQNKCVPGSDVLIDELFQGSTGDLLNIHRIEKYLDKSKIAYKIQTYIEQSREESD 480
Query: 346 NVEKEGPVSFVASITAHAGID-QKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATL 404
+ P+ F + + ++ K RF +++ I D E ++
Sbjct: 481 EKQASSPLLFKVTAFLKSLVNPSKEGRFFWDK---------INDDTEIKYL--------- 522
Query: 405 VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
+++P S + V + + V++ GT+ P++
Sbjct: 523 ----------LLDP--------------------SEMFRDVVESARCVLLCGGTMEPVED 552
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICPM----VLTRGSDQLPV-STKFDMRSDPGVARNYG 519
Y R L P V T I P VLT S + V + R+DP + R
Sbjct: 553 YYRYL--FPYVPGEKIKKFTCGHIVPQENIEVLTVSSRKTTVFDFSYHKRNDPSMLRELA 610
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
L ++ VP+GI+ F SY Y++++I+TW G L +I K VF+E+ D L
Sbjct: 611 LSLQDICERVPNGIIVFAPSYKYLNQLISTWRKDGNLAKISTLKQVFLESSDSTSIESIL 670
Query: 580 DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
+Y A G GA+ FSV GK++EG++F R VIM G+P+ S L+A+ +++
Sbjct: 671 RDYGAAAR-GSGAILFSVVGGKMSEGVNFSDELARAVIMLGLPYPNAFSGELIAKRKFIE 729
Query: 640 DTFQIKEG----------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS 689
+T K G ++ +R Q VGR IR DY +++ D RY+ +S
Sbjct: 730 ETTLSKGGTQAMAKKNSREYYENICMRAVNQSVGRSIRHANDYSVIVLFDTRYNSSHIQS 789
Query: 690 KLPGWILSHLRDAHLNLSTDMALHIAREFL 719
KL GW+ S +R S DM L +F
Sbjct: 790 KLSGWMRSSIRPER--ESFDMTLERIADFF 817
>gi|297850494|ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
gi|297338970|gb|EFH69387.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
Length = 1138
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 193/797 (24%), Positives = 323/797 (40%), Gaps = 169/797 (21%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALD-----AKGHCLLEMPTGTGKTIALLSLI 56
++++ + V FPY Y Q ++M + LD H LLE PTGTGK+++LL +
Sbjct: 26 VYQIGGLQVEFPY-QPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSV 84
Query: 57 TSYVLS--------------------------KPENPV--KLIYCTRTVHEMEKTLAELK 88
++ S +P P + Y +RT ++ + + E
Sbjct: 85 LAWQKSYKSRFPNGNLTHSRTHPSDNAASCNVEPPEPAIPTIYYASRTHAQITQVIREY- 143
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
R G + +G SRK C NS V EN VD C R L +
Sbjct: 144 -------RKTGYRVPMTVLG--SRKRYCTNSHVQGKEN---VDEKC--------RLLLKD 183
Query: 149 NPNIETCEFFENYEKAASAAVLPP--------GVYTLQDLRAFGKQQGWCPYFLARHMVQ 200
NI+ EF K + P GV+ ++DL GK CPYF + M++
Sbjct: 184 KKNIKCAEF-----KGVGQILAYPSLQQNGHNGVHDIEDLVKIGKTVTGCPYFASWKMLE 238
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGAT 260
A +V Y Y++DP + G ++ + ++++FDEAHN++++ EA S+++
Sbjct: 239 VAQLVFCPYSYIIDPVIRGGVNLQ---GAIIIFDEAHNMEDIAREAGSINMEEDI----- 290
Query: 261 RNLSRINQEIERFKATDAGRLRAEYNRLVEGL---------ALRGNLPNAWLSNPALPSD 311
L ++ E+E+ + + Y +VEGL +L + SN
Sbjct: 291 --LFKLKNELEQVSENEPEIYESLY-IVVEGLISWIGRKKDSLVKRDSEHYFSN-WTGDR 346
Query: 312 ILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQ--KT 369
LKE NI E+F ++ Q + + E ++ + P +++ I+ + +++ T
Sbjct: 347 ALKELKEFNI-TPENFPNLEACFNQAIT-KSEASEMDPDKP--YLSGISV-STLEELFAT 401
Query: 370 LRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDP 429
L + + R S +L E + +Q T +T FS
Sbjct: 402 LTYFFSRNGSHVLDYE-------MGLQRSAKRGTRDNGWTHTFS---------------- 438
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC-I 488
L C + S+ K + D S+++TSGTLSP++ + L + + +
Sbjct: 439 ---LWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCLEAPHVIDPNMQV 495
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ G P++ + GK L E+ SIVP G + FF SY M+++
Sbjct: 496 WAGAISSGPGNFPLNASYKTADAYAFQDALGKSLEEICSIVPGGSLVFFPSYKLMEKLCT 555
Query: 549 TWNDSGILKEIMQHKLVFIE----TQDVVETTLA----------LDNYRKA--------- 585
W+++G + + FIE +D ET L N R +
Sbjct: 556 RWHETGQWSRLCLKRDFFIEPRGGAKDDFETVLKEYYDSISGNNRSNGRNSRVKKAGSVI 615
Query: 586 ----CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT 641
D RG+ F +V RGKV+EG+DF R VI+ G+PF L IL+ DT
Sbjct: 616 TEAQDDSKRGSAFLAVCRGKVSEGLDFSDDNARAVIIVGIPFP-NLGDILVELKRKYNDT 674
Query: 642 FQ-----IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIF-------------ADKRYS 683
+ + ++ A R Q GR IR + DYG +IF D+RY
Sbjct: 675 NKSSKKLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIFLVMIDLRLSCFGVPDERYR 734
Query: 684 RHDKRSKLPGWILSHLR 700
+ R+ + W+ ++
Sbjct: 735 QPRNRASISKWLRQSIK 751
>gi|198436769|ref|XP_002122486.1| PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide
11 [Ciona intestinalis]
Length = 907
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 170/681 (24%), Positives = 299/681 (43%), Gaps = 65/681 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELK---LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
++ +C+RT ++ + + EL+ +N +I L SR NLC+N V
Sbjct: 219 TRIFFCSRTHSQLSQFVKELQKSPFGNNVHCDADEGDFQITMASLGSRNNLCINDSVRKL 278
Query: 125 ENRDSVDAAC----------RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG- 173
++ + ++ C K+ + + + TC ++ N++ A G
Sbjct: 279 KSVNLMNERCLEMQKNSKPKSKKEDDQDKPKRQKKVSKSTCCYYTNHDGIAQLTNTIVGK 338
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++ ++++ GK CPY+ +RH V + +VV YQ LL K S K+SVV+
Sbjct: 339 IHDIEEVIKEGKSLEACPYYASRHAVTLSQLVVLPYQTLLH-KATRQASGIKLKDSVVII 397
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE-RFKATD---AGRLRAEYNR-- 287
DEAHN+ S V + L A LSR ++ R KA + +L N
Sbjct: 398 DEAHNLVEALNSMHSCLVTAKQLSKAYGQLSRYAKKFNSRLKARNLFYVKQLLYVLNNMM 457
Query: 288 -LVEGLALRGNLP-NAWLSNPALP-SDILKEAVPGNIRRAEHFLHVLR-----RLVQYLR 339
L++G++L + N S+ L +D L ++ NI +F +LR ++ + L
Sbjct: 458 VLLKGMSLESDSKENRQKSSQLLTVNDFLFKSKIDNI----NFFKLLRYCERSKISRKLG 513
Query: 340 GRLETENVEKEGPVSFVASITAHAGIDQKTLRF-CYERLHSLMLTLEITDTDEFLHIQTI 398
G +E E +G V + + K ++ + S ++ + +HI+++
Sbjct: 514 GFVE--KFETDGIVPIITKKESSMTTFLKDIKNPVVPSVPSSKPNENVSMSSPLMHIESL 571
Query: 399 CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGT 458
FA L G ++ D+ P + +L + H + + + +++++ GT
Sbjct: 572 --FAALSSANQDGR--VVMTHDDSGPAVKYLLLNPASH-----FQQILEECRALIVAGGT 622
Query: 459 LSP----IDLYPRLLNFHPVVSRSFKMSLT-----RDCICPMVLTRGSDQLPVSTKFDMR 509
+ P ID SR + S + + P+ L+ G + F R
Sbjct: 623 MQPSSCLIDQLLAKTESEKHRSRIVEFSCGHVIDGKRQLLPLALSSGPSGVEFEFTFQKR 682
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
S+ + G+LL+ + +I+P G+VCFF SY Y ++ W D+GIL + K +F E
Sbjct: 683 SNFKLIDETGRLLLNISNIIPGGVVCFFPSYDYERFVVQRWQDAGILSRLEMKKKIFREP 742
Query: 570 QDVVETTLALDNYRKAC-DCG----RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
+ E L Y + + G G + SV GK++EGI+F GR V+M G+P+
Sbjct: 743 KKANEVDKLLTEYTRCVKNVGPGKQNGGLLLSVVGGKMSEGINFSDDLGRCVVMVGLPYP 802
Query: 625 YTLSKILLARLEYLRDTFQI----KEGDFLTFDAL--RQAAQCVGRVIRSKADYGMMIFA 678
+ S L ++ YL + + + ++ L + Q +GR IR + DY +I
Sbjct: 803 NSQSPELREKMNYLDRNMKCHTDGRTAGQVHYENLCMKAVNQSIGRAIRHRNDYASIILL 862
Query: 679 DKRYSRHDKRSKLPGWILSHL 699
DKRYSR +KLP WI +HL
Sbjct: 863 DKRYSRPSVANKLPKWISNHL 883
>gi|348506178|ref|XP_003440637.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oreochromis niloticus]
Length = 897
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 170/698 (24%), Positives = 295/698 (42%), Gaps = 107/698 (15%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAEN 126
K+ YC+RT ++ + +H Q P +K I + L SR+NLC+N V +
Sbjct: 208 TKIYYCSRTHSQL------AQFVHEVQK---SPFSKDISVVTLGSRQNLCINEEVRRLGS 258
Query: 127 RDSVDAACRKRTAS------WVRALAAE---NPNIETCEFFENYEKAASAAVLPPGVYTL 177
++ C + + +V L + P C + + V+ V+ +
Sbjct: 259 IQRINDRCMEMQKNKHGERHFVEELGVKRKRGPAKSVCPYNKASALQQMRDVVLGAVHDI 318
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKEMQKESVVVFD 234
+ L G++ CPY+ R + A +VV YQ +L + AG+ K V++ D
Sbjct: 319 EQLLKLGRETHSCPYYATRLAIPPAQLVVLPYQMVLHEATRRAAGV----QLKGQVLIID 374
Query: 235 EAHNIDNV--CIEALSVSVRRQTLEGAT--RNLSRINQEIERFKATDAGRLRAE---YNR 287
EAHN+ + CI + +S GA R S++ Q +R+K+ RL+A+ Y +
Sbjct: 375 EAHNLSDTLSCIHSAELS-------GAQLCRAHSQLIQYADRYKS----RLKAKNLMYIK 423
Query: 288 ----LVEGL-----ALRGNLPNAWLSNPALP----SDILKEAVPGNIRRAEHFLHVLRRL 334
++EGL G P + + P ++ L +A NI + + R
Sbjct: 424 QILFVIEGLVRVLGGKVGQSPQSQATQPGTEMLTINNFLFKAQIDNI----NLFKLQRYF 479
Query: 335 VQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE--------- 385
+ + R VEK ++ H+ +++ R E L+ + TL+
Sbjct: 480 EKSMISRKLGGFVEKYAGSG--VTLHTHSCNNKENRR--TEGLNRYLQTLQSNQNPGTGQ 535
Query: 386 ITDTDEFLHIQTICD----------FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSC 435
++D E + + + F L + T G ++ + + + ++
Sbjct: 536 LSDQQESVEAEKVLSASPMMQVEGFFMALTNSNTDGRVVV-----HKQGSLSESSVKFLL 590
Query: 436 HDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP------VVSRSFKMSLTRDCIC 489
+ ++ V ++V+I GT+ P+ + + L F V S + + I
Sbjct: 591 LNPAVHFAQVLKECRAVIIAGGTMQPVSDFKQELLFSAGVVEERVTEFSCGHVIPPENIL 650
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
P+VL G + F R P + G++L + ++VP G+VCFF SY Y II+
Sbjct: 651 PLVLCSGPSGQELEFTFQNRDTPRMMDETGRILSNICNVVPGGVVCFFPSYDYSRRIISH 710
Query: 550 WNDSGILKEIMQHKLVFIETQDVVETTLALDNY-----RKACDCG--RGAVFFSVARGKV 602
W SG L + K +F E + + L+ + R + DC GA+ FSV GK+
Sbjct: 711 WETSGTLTRLANKKKIFQEPKKANQVEQVLNEFSRCIQRCSADCSGLTGALLFSVVGGKM 770
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD-----FLTFDALRQ 657
+EGI+F GR V+M G+P+ S L ++ YL +G + ++
Sbjct: 771 SEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDRHLPHSQGRSPGQALIENLCMKA 830
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q +GR IR + DY ++ D+RYSR SKLP WI
Sbjct: 831 VNQSIGRAIRHRGDYSSIVLCDRRYSRPATLSKLPTWI 868
>gi|1666893|gb|AAB18749.1| CHL1 potential helicase [Homo sapiens]
Length = 906
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 172/672 (25%), Positives = 280/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQTICDFA 402
+ G V AG Q +L + + +HI+ F
Sbjct: 514 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIE---GFL 570
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 571 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 687 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 746
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 807 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 866
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 867 RPPVLAKLPAWI 878
>gi|1517816|gb|AAB06962.1| helicase [Homo sapiens]
Length = 906
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 172/672 (25%), Positives = 280/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQTICDFA 402
+ G V AG Q +L + + +HI+ F
Sbjct: 514 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIE---GFL 570
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 571 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 687 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 746
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 807 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYA 866
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 867 RPPVLAKLPAWI 878
>gi|330843781|ref|XP_003293824.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
gi|325075810|gb|EGC29655.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
Length = 617
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 159/665 (23%), Positives = 279/665 (41%), Gaps = 110/665 (16%)
Query: 9 TVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS------ 62
TV FP+ YP Q S M + LD K +CLLE PTGTGKT+ LL +
Sbjct: 3 TVKFPF-KPYPSQASMMSRILSGLDNKENCLLESPTGTGKTLTLLCSALEWHREDLKKSN 61
Query: 63 --------------------KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA 102
+P + +C+RT H K L E Y+
Sbjct: 62 NNNNGSDSDDTDSEDPVENFRPNPSPTIFFCSRT-HSQIKQLTEELAKTPYR-------P 113
Query: 103 KILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE 162
+L +G SR + C+N + + C+K ++P C +++
Sbjct: 114 NMLVMG--SRDHYCINKELKDVPRKKE---RCKK---------IIKDPG---CRYYKKEF 156
Query: 163 KAASAAVLPPG----VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVA 218
+S + G V+ ++DL+ G++ CP+F+++ M+ +++V Y YL+DP +
Sbjct: 157 VLSSISTFRKGGAKQVWDIEDLKKAGQEHSECPFFVSKDMLPSSDLVFCPYNYLIDPSIR 216
Query: 219 GIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA 278
+ K+ K S+V+FDEAHNI++ ++A S TL+ N+ ++ ++I R
Sbjct: 217 STL-KDKVKNSIVIFDEAHNIEDALMDASSF---ESTLDELYENVFQVLKQI-RMNPKII 271
Query: 279 GRLRAEYNRLVEGLALRGNLPNAWL---SNPALPSDILKEAVPGNIRRAEHFLHVLRRL- 334
L E + + + AW+ S P D K + + + + L +L+ +
Sbjct: 272 KNLSPEKEHAINIIHPIMDELVAWIREKSESLKPIDFEKHS---RVWKGKEILDILQGIG 328
Query: 335 ---VQYLR-----GRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL-----HSLM 381
Y L E +K+ + +A K + F ++ + L+
Sbjct: 329 LSESNYFEFSSSVKALSDETDDKQNKKDKLGKPSAILEEFSKVIEFIFKNANWVDDYVLV 388
Query: 382 LTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
L + T+ F+ Q + +V + P I L H
Sbjct: 389 LQKQTVLTNSFVKKQQSSKWNLIVSIWALS------------PRIAFSSLNSKTH----- 431
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYP-RLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
S+++TSGTLSP+ +P L + P+ + +S ++ L+ G
Sbjct: 432 ---------SIILTSGTLSPLYSFPFELASPFPISAEMGNLSDIKNRAWIGTLSHGVRNE 482
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
+ G+ ++E + I+P G++CFF SY ++++I W +G+L +I
Sbjct: 483 KFLCTHGNTDSFSFQDSLGETIIEHIKIIPSGVLCFFPSYGFLEKITDRWASTGLLDKIN 542
Query: 561 QHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
+ K F E +++ + L YR+ +GA+ F+V RGKV+EGIDF Y R VI+
Sbjct: 543 ELKPAFAEPKNIKDFNETLIGYRQTVQSNPKKGAILFAVCRGKVSEGIDFSDEYARGVIV 602
Query: 619 FGVPF 623
G+P+
Sbjct: 603 VGIPY 607
>gi|1517818|gb|AAB06963.1| helicase, partial [Homo sapiens]
Length = 734
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 172/671 (25%), Positives = 281/671 (41%), Gaps = 64/671 (9%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ YC+RT ++ + +H + G +++++G S++NLCVN V + +
Sbjct: 80 KIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SQQNLCVNEDVRSLGSVQ 131
Query: 129 SVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
++ C R R A C F+ + + V ++
Sbjct: 132 LINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQ 191
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L A GK+ CPY+ +R + A +VV SYQ LL +Q + VV+ DEAHN+
Sbjct: 192 LLALGKEARACPYYRSRLAIPAAQLVVLSYQMLLHAATRQAAGIRLQ-DQVVIIDEAHNL 250
Query: 240 DNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRGN 297
+ SV V Q + ++ L + + +R KA + L+ L + +A L GN
Sbjct: 251 IDTITGMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGGN 310
Query: 298 L---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEK 349
+ PN LS + +D L ++ NI + V R + + R E+
Sbjct: 311 IKQNPNTQSLSQTGMELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTER 366
Query: 350 EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD------EFLHIQTICDFAT 403
G V AG Q +L + + +HI+ F
Sbjct: 367 YGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASVPQPASPLMHIE---GFLA 423
Query: 404 LVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI- 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 424 ALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVS 479
Query: 463 DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARN 517
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 480 DFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICIGVSNQPLEFTFQKRDLPQMMDE 539
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE---TQDVVE 574
G++L + S+V G+VCFF SY Y+ ++ A W G+L + K +F E V +
Sbjct: 540 VGRILCNLCSVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGHLAARKKIFQEPKSAHQVEQ 599
Query: 575 TTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 600 VLLAYSRCIQACGQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAE 659
Query: 631 LLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYSR 684
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+R
Sbjct: 660 LQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYAR 719
Query: 685 HDKRSKLPGWI 695
+KLP WI
Sbjct: 720 PPVLAKLPAWI 730
>gi|332232617|ref|XP_003265500.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1
[Nomascus leucogenys]
Length = 906
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 170/672 (25%), Positives = 279/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALADVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE------FLHIQTICDFA 402
+ G V AG Q +L + + +HI+ F
Sbjct: 514 RYGAVLSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASAPRPASPLMHIE---GFL 570
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 571 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + +
Sbjct: 687 EAGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLDRLAARKKIFQEPKSAHQVE 746
Query: 577 LALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
L Y + CG+ GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQGCGQERGRVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSP 806
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 807 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 866
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 867 RPPVLAKLPAWI 878
>gi|378756742|gb|EHY66766.1| hypothetical protein NERG_00406 [Nematocida sp. 1 ERTm2]
Length = 690
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 163/716 (22%), Positives = 303/716 (42%), Gaps = 93/716 (12%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+++ T+ Y+ +Y Q + + LD ++E PTGTGKT+++L + ++V P
Sbjct: 6 IKNYTINTEYE-LYEPQRKSIETILTCLDNGESGMIESPTGTGKTLSILEAVVAWVNKNP 64
Query: 65 EN--PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
E ++ TRT+ + + +A LK + N P +LA SR++LC+NS V
Sbjct: 65 EKLEGGQIYVTTRTIKQASQLIAHLKKMKN------APMMNLLA----SRRHLCLNSEVS 114
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+ + DS K R PN + E+ + PGV++++DL +
Sbjct: 115 KSNDIDSACKKKNKDPNKDSRCKYYRTPNEK--------EQERDRNISLPGVFSIEDLVS 166
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G + CP++ R + A ++ Y Y++ +++ + ++ SV++ DEAHNID+V
Sbjct: 167 AGGECNSCPFYYTRERQEKATIIFSPYNYIVSERISAALKIDLTG-SVLIVDEAHNIDDV 225
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAW 302
C SV ++R L +SR+ T +G E + + G
Sbjct: 226 CRSTGSVDIKRADLASL---ISRL--------GTGSG---MESPEVANSMMETGKFVKKI 271
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV-EKEGPVSFVASITA 361
++ +D+L + PG + + ++N E P + S
Sbjct: 272 MNYLEETTDVLNKLDPG-------------------QCVINSDNQREISIPSKEMISTLE 312
Query: 362 HAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD-FATLVGTYTRGFSIIIEPFD 420
GI + T+ + + L+ I D F I I D ++ + +++
Sbjct: 313 KMGISKLTIDDTFSSIE-LLFKDMIPDDYFFQWITQIKDVLKYIMNDGENKYGMVVS--- 368
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
D + L H A++ P++++ +SV++ SGTL P + L+ SFK
Sbjct: 369 ------SDKISFLLLHAAAI-FNPIYEKARSVILLSGTLEP---FQELVTELTTKKNSFK 418
Query: 481 MSLTRDCICPM-----VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD--GI 533
L+ D I + +P+ + P +V++ + G+
Sbjct: 419 HFLSADHIISQSQLYTAEVSQYNSVPILGTYQGSKHPDYISTLVSSIVDIAHSLEKVGGV 478
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAV 593
+CF SY+ + + + +++ +H +F+E + + L+ YR+ C G+ +
Sbjct: 479 LCFVPSYNML---------TLLERKLEKHVKLFVENKSNSKFEYELEQYRRYCKMGK-CI 528
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD 653
F V RGK +EGI+F H R VI+ G+P+ + ++ + +Y +
Sbjct: 529 FLCVFRGKASEGINFRDHESRAVILVGIPYPNIRNHSVILKKQYNDRYLNSTGSKWYEQQ 588
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTD 709
A R Q +GR IR K D+G + D RY + K+ W + A +N+ TD
Sbjct: 589 AFRAVNQALGRCIRHKNDWGSIFMLDSRYRSAVRSLKISKWAI-----ASVNMITD 639
>gi|410212712|gb|JAA03575.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 175/677 (25%), Positives = 279/677 (41%), Gaps = 74/677 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + Q +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYMEQYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------FLHIQT 397
+ G V AG Q + L M DE +HI+
Sbjct: 514 RYGAVFSSREQPKLAGFQQ-----FLQSLQPRMTEALAAPADESQASTPRPASPLMHIE- 567
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 568 --GFLAALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGG 621
Query: 458 TLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL VV S + D I P+V+ G P+ F R
Sbjct: 622 TMQPVSDFRQQLLACAGVEAEHVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKREL 681
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE--- 568
P + G++L + +V G+VCFF SY Y+ ++ A W G+L + K +F E
Sbjct: 682 PQMMDEVGRILCNLCGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKS 741
Query: 569 TQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
V + LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 742 AHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 801
Query: 625 YTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFA 678
S L ++ YL T Q G L + ++ Q +GR IR + D+ ++
Sbjct: 802 NIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLL 861
Query: 679 DKRYSRHDKRSKLPGWI 695
D+RY+R +KLP WI
Sbjct: 862 DQRYARPPVLAKLPAWI 878
>gi|119493390|ref|XP_001263885.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
gi|206558089|sp|A1D8E4.1|CHL1_NEOFI RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119412045|gb|EAW21988.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
Length = 861
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 161/682 (23%), Positives = 286/682 (41%), Gaps = 105/682 (15%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKL----------LHNYQTRHLGPAAKILAIGLSSRKN 114
++ VK+ YC+RT ++ + +EL+ L ++ + L SRKN
Sbjct: 204 DDDVKIFYCSRTHSQLSQFSSELRRVKMPSSMPAELSTSDANTDDAEERVKHLTLGSRKN 263
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV 174
LC+N +V++ N +++ C + V AAE + C + + E VL
Sbjct: 264 LCINPKVMSLGNATAINERCLELQQPGV---AAE----KRCPYLPSKEDEGQ--VLQFRD 314
Query: 175 YTL------QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
+TL +D+ GK+ G CPY+ +R +++ + +V Y LL + + K
Sbjct: 315 HTLATIKDIEDMGKLGKRMGICPYYASRSVLKHSEIVTLPYPLLLQRSARDALDLSI-KN 373
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
VV+ DEAHN+ + SV++ L+ A LS++ + KA RL+ +
Sbjct: 374 HVVIIDEAHNLMDAICNIHSVTITLSQLQTA---LSQLTTYARKHKA----RLKGKNRSY 426
Query: 289 VEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
+ + ++ + +LR + EN+
Sbjct: 427 IA-----------------------------------QIIRLISSIADHLRSTI-GENLP 450
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEF---LHIQTICDFATLV 405
EG V + + A G+DQ L L ++ EF + Q+ ++ V
Sbjct: 451 AEGAVD-PSDLMAGKGVDQINPYKLSRYLQESKLARKVDGYVEFSKDKNQQSDDKPSSPV 509
Query: 406 GTYTRGFSI-IIEPFDER----MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
+ F + ++ P E + D L+ D + + + + ++V++ GT+S
Sbjct: 510 LFLVQSFLLPLMNPSAEGRFFYLKFHDDIQLKYMLLDPTNHFREIVEDARAVILAGGTMS 569
Query: 461 PIDLYPRLLNFHPVVSR----SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
P+ Y L + SR S+ + + + L G +D R +
Sbjct: 570 PMSDYRNHLFSYIAPSRLDTFSYGHVIPPENLIAHTLVNGVLGSEFDFTYDSRDSEKMIL 629
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-------NDSGILKEIMQHKLVFIET 569
+ G+ + + +PDG+V FF SY Y+ I+A W IL I + K + E
Sbjct: 630 DLGRTVAMLCQAIPDGVVAFFPSYDYLSRILAIWRKPLVGEKGQTILSLIERKKSILYEG 689
Query: 570 QDV-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+D+ +T L Y + D G+GA+ SV GK++EGI+F GR V++ G+PF S
Sbjct: 690 RDMGAKTEDLLQEYTRTIDSGQGALLLSVVGGKLSEGINFSDKLGRGVLIIGLPFPNIRS 749
Query: 629 KILLARLEYL-RDTFQIKEG--------------DFLTFDALRQAAQCVGRVIRSKADYG 673
+ A+++Y+ + T+ G DF +R QC+GR IR + DY
Sbjct: 750 AVWQAKIQYVEQKTYNSSSGSEKDRLSIAKAAGKDFYENACMRAVNQCIGRAIRHRNDYA 809
Query: 674 MMIFADKRYSRHDKRSKLPGWI 695
++ D+RY + + + KLP WI
Sbjct: 810 AIVMIDRRYEKANIQGKLPAWI 831
>gi|71000721|ref|XP_755042.1| DNA helicase [Aspergillus fumigatus Af293]
gi|74673836|sp|Q4WWE9.1|CHL1_ASPFU RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|66852679|gb|EAL93004.1| DNA helicase, putative [Aspergillus fumigatus Af293]
Length = 782
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 162/702 (23%), Positives = 289/702 (41%), Gaps = 137/702 (19%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLH------------NYQTRHLGPAAKILAIGLSSR 112
++ VK+ YC+RT ++ + +EL+ + + T + K L +G SR
Sbjct: 117 DDDVKIFYCSRTHSQLSQFSSELRRVKMPSSMPAELSTSDANTDEVQERVKHLTLG--SR 174
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNI---ETCEFFENYEKAASAAV 169
KNLC+N +V++ N +++ C L + P I + C + + E +
Sbjct: 175 KNLCINPKVMSLGNAAAINERC----------LELQQPGIAAEKRCPYLPSKED--EGQI 222
Query: 170 LPPGVYTL------QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
L +TL +D+ GK+ G CPY+ +R +++ + V+ Q ++ ++ +
Sbjct: 223 LQFRDHTLATIKDIEDMGKLGKRMGICPYYASRSVLKHSENVLLKAQKIVTLPYPLLLQR 282
Query: 224 EMQ-------KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKAT 276
+ K VV+ DEAHN+ + SV++R L+ A L ++ + KA
Sbjct: 283 SARDALDLSIKNHVVIIDEAHNLMDAICNIHSVTIRLSQLQTA---LLQLTTYAHKHKAR 339
Query: 277 DAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQ 336
G+ R+ ++ + RLV
Sbjct: 340 LKGKNRS-------------------------------------------YIAQIIRLVS 356
Query: 337 YLRGRLET---ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFL 393
+R L + +N+ EG V + + A G+DQ L L ++ EFL
Sbjct: 357 SIRDHLRSILGQNLPAEGTVD-PSDLMAGKGVDQINPYKLSRYLQESKLARKVDGYVEFL 415
Query: 394 ---HIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHD----------ASL 440
+ Q+ ++ V + F + + P L CHD +
Sbjct: 416 KNKNQQSDDKPSSPVLFLVQSFLLSL-----MNPSAEGRFFYLKCHDDIQLRYMLLDPTN 470
Query: 441 AVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR----SFKMSLTRDCICPMVLTRG 496
+ + + ++V++ GT+SP+ Y L + SR S+ + + + L G
Sbjct: 471 QFREIVEDARAVILAGGTMSPMSDYRNHLFSYIAPSRLDTFSYGHVIPPENLIAHTLVNG 530
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------ 550
+D R + + G+ + + +PDG+V FF SY Y+ I+A W
Sbjct: 531 VLGSEFDFTYDSRDSEKMILDLGRTVATLCQAIPDGVVAFFPSYDYLSRIVAIWRKPLEG 590
Query: 551 -NDSGILKEIMQHKLVFIETQDV-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDF 608
IL I + K + E +D+ +T L Y + D G+GA+ SV GK++EGI+F
Sbjct: 591 EKGETILSLIEREKSILYEGRDMGPKTDDLLQEYTRTIDSGQGALLLSVVGGKLSEGINF 650
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEG--------------DFLTFD 653
GR V++ G+PF S + A+++Y+ + T+ G DF
Sbjct: 651 SDKLGRGVLIIGLPFPNIRSAVWQAKIQYVEQKTYNSSSGSEKDRQSIAKAAGKDFYENA 710
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+R QC+GR IR + DY ++ D+RY + + + KLP WI
Sbjct: 711 CMRAVNQCIGRAIRHRNDYAAIVMIDRRYEKANIQGKLPAWI 752
>gi|296211273|ref|XP_002752340.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Callithrix jacchus]
Length = 903
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 176/677 (25%), Positives = 281/677 (41%), Gaps = 77/677 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKVYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKR----TASWVRALAAENPNIET-CEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R + P + C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRPEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAYSQLLQYMERYSKRLKAKNLMYLKQILYLLEKFVAMLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMVSRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------FLHIQT 397
+ G V AG Q L SL DE +HI+
Sbjct: 514 RYGAVLSSREQPKLAGFQQ--------FLQSLQPKATEVPADESPATALRPASPLMHIE- 564
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 565 --GFLAALTTANQDGRVILS----RQGSLSQSSLKFLLLNPAVHFAQVVKECRAVVIAGG 618
Query: 458 TLSPI-DLYPRLL---NFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL P VV S + D I P+V+ G P+ F R
Sbjct: 619 TMQPVSDFRQQLLACAGVEPERVVEFSCGHVIPPDNILPLVICSGISSQPLEFTFQKREL 678
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE--- 568
P + G +L + +VP G+VCFF SY Y+ ++ W G+L + K +F E
Sbjct: 679 PQMMDEAGGILCNLCGVVPGGVVCFFPSYEYLRQVHTHWEKGGLLDRLAARKKIFQEPKS 738
Query: 569 TQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
T V + LA + C R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 739 THQVEQVLLAYSRCIQGCGQERGRVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 798
Query: 625 YTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFA 678
S L ++ YL T Q G L + ++ Q +GR IR + D+ ++
Sbjct: 799 NIRSPELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQRDFASIVLL 858
Query: 679 DKRYSRHDKRSKLPGWI 695
D+RY+R +KLP WI
Sbjct: 859 DQRYARPPVLAKLPAWI 875
>gi|290987559|ref|XP_002676490.1| predicted protein [Naegleria gruberi]
gi|284090092|gb|EFC43746.1| predicted protein [Naegleria gruberi]
Length = 640
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 158/677 (23%), Positives = 293/677 (43%), Gaps = 111/677 (16%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+I+ +RT ++ + ELK +I+ +G SR+ C+N V++ +
Sbjct: 11 KIIFTSRTHSQLTHAIKELK--------KSAYTPEIVVMG--SREQSCINPDVISLKGFQ 60
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVL-----PPGVYTLQDLRAF 183
+ + S VR+ C+++ N+ + L + ++DL
Sbjct: 61 QIS-----KCTSLVRSGG--------CKYYTNFTSLKKSGELFTHEKEDEIEDIEDLLEK 107
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G ++ +CP+F +R + A ++ Y YL+DP + ++ ++ S+++FDEAHN+ +C
Sbjct: 108 GLKRCFCPFFYSREKQKVAEIIFMPYNYLIDPLLRKKVNVDISN-SIIIFDEAHNVQKLC 166
Query: 244 IEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWL 303
EA S + +T N+S+ EIE+ RAE ++L
Sbjct: 167 AEASS-------FDFSTINISKAIAEIEK--------CRAEMDKLT-------------- 197
Query: 304 SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT--- 360
PSDI K R++ F V L+ L ++ + +EG S SI
Sbjct: 198 ---IDPSDIQKSTE----LRSDCF-DVSSALLD-LDIHIDEMEIPEEGSTSTGDSIYEVF 248
Query: 361 AHAGIDQKTLRFCYERLHSLMLTLE-----------ITDTDEFLHIQTICDFATLVGTYT 409
++A I T E++ S++ L+ + + E + + C+
Sbjct: 249 SYASIHPSTWETFNEKIRSIITFLQNKKQSCSGLERVKEAVERVFNEANCE------EVF 302
Query: 410 RGFSIIIEPFDERMPHI---PDPVLQLSCHDASLAVKPVFDRFQ-SVVITSGTLSPIDLY 465
+ F + + ++ P L C + L+++ + S ++TSGTLSP++ +
Sbjct: 303 KNFYKVYIYYSKKQPGKDFRKSKTLSFWCFNPGLSMQNLAKEGPLSFILTSGTLSPMESF 362
Query: 466 PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
L + + R+ IC M G +++ F R+ R G L+ +
Sbjct: 363 AYELGLSFPIRLENPHVVNREQICVMAAQCGPGGTKLNSSFTNRASEPYLREVGTTLLNL 422
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWNDSG-----ILKEIMQHKLVFIETQDVVETTLALD 580
+VPDG++ FF SY+ MD+ I W S + Q+K + E ++ + +
Sbjct: 423 SKVVPDGLLVFFPSYTLMDQCIEIWKKSNGGAKSTWDSVTQNKTIITEPKESSKLNQVIR 482
Query: 581 NYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
Y + + GA FF+V RG+V+EG+DF GR ++ G+PF + + +
Sbjct: 483 EYEDSIKNRKGNTTGACFFAVCRGRVSEGLDFINRNGRCCMIVGLPFPPLFDLKVKLKRD 542
Query: 637 YLRDTFQ-----------IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
YL +T + I + T ++ R Q +GR+IR + DYG ++ D+RY+
Sbjct: 543 YLDETAKRITTENPNAKPITGSQWYTQESSRAVNQAIGRIIRHRYDYGAVVLCDERYATQ 602
Query: 686 DKRSKLPGWILSHLRDA 702
++R +L W+ HL+ A
Sbjct: 603 NQRQQLSRWLQPHLKVA 619
>gi|159128055|gb|EDP53170.1| DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 782
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 163/702 (23%), Positives = 291/702 (41%), Gaps = 137/702 (19%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLH------------NYQTRHLGPAAKILAIGLSSR 112
++ VK+ YC+RT ++ + +EL+ + + T + K L +G SR
Sbjct: 117 DDDVKIFYCSRTHSQLSQFSSELRRVKMPSSMPAELSTSDANTDDVQERVKHLTLG--SR 174
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNI---ETCEFFENYEKAASAAV 169
KNLC+N +V++ N +++ C L + P I + C + + E +
Sbjct: 175 KNLCINPKVMSLGNAAAINERC----------LELQQPGIAAEKRCPYLPSKEDEGQ--I 222
Query: 170 LPPGVYTL------QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
L +TL +D+ GK+ G CPY+ +R +++ + V+ Q ++ ++ +
Sbjct: 223 LQFRDHTLATIKDIEDMGKLGKRMGICPYYASRSVLKHSENVLLKAQKIVTLPYPLLLQR 282
Query: 224 EMQ-------KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKAT 276
+ K VV+ DEAHN+ + SV++R L+ A L ++ + KA
Sbjct: 283 SARDALDLSIKNHVVIIDEAHNLMDAICNIHSVTIRLSQLQTA---LLQLTTYAHKHKAR 339
Query: 277 DAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQ 336
G+ R+ ++ + RLV
Sbjct: 340 LKGKNRS-------------------------------------------YIAQIIRLVS 356
Query: 337 YLRGRLET---ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFL 393
+R L + +N+ EG V + + A G+DQ L L ++ EFL
Sbjct: 357 SIRDHLRSILGQNLPAEGTVD-PSDLMAGKGVDQINPYKLSRYLQESKLARKVDGYVEFL 415
Query: 394 ---HIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHD----------ASL 440
+ Q+ ++ V + F + + P L CHD +
Sbjct: 416 KNKNQQSDDKPSSPVLFLVQSFLLSL-----MNPSAEGRFFYLKCHDDIQLRYMLLDPTN 470
Query: 441 AVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR----SFKMSLTRDCICPMVLTRG 496
+ + + ++V++ GT+SP+ Y L + SR S+ + + + L G
Sbjct: 471 QFREIVEDARAVILAGGTMSPMSDYRNHLFSYIAPSRLDTFSYGHVIPPENLIAHTLVNG 530
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-----N 551
+D R + + G+ + + +PDG+V FF SY Y+ I+A W
Sbjct: 531 VLGSEFDFTYDSRDSEKMILDLGRTVATLCQAIPDGVVAFFPSYDYLSRIVAIWRKPLEG 590
Query: 552 DSG--ILKEIMQHKLVFIETQDV-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDF 608
+ G IL I + K + E +D+ +T L Y + D G+GA+ SV GK++EGI+F
Sbjct: 591 EKGETILSLIEREKSILYEGRDMGPKTDDLLQEYTRTIDSGQGALLLSVVGGKLSEGINF 650
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEG--------------DFLTFD 653
GR V++ G+PF S + A+++Y+ + T+ G DF
Sbjct: 651 SDKLGRGVLIIGLPFPNIRSAVWQAKIQYVEQKTYNSSSGSEKDRQSIAKAAGKDFYENA 710
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+R QC+GR IR + DY ++ D+RY + + + KLP WI
Sbjct: 711 CMRAVNQCIGRAIRHRNDYAAIVMIDRRYEKANIQGKLPAWI 752
>gi|426372116|ref|XP_004052976.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Gorilla gorilla gorilla]
Length = 1016
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 173/672 (25%), Positives = 278/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 337 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 388
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 389 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 448
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 449 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 507
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + Q +R KA + L+ L + +A L G
Sbjct: 508 LIDTITGMHSVEVSGSQLCQAHSQLLQYMEQYGKRLKAKNLMYLKQILYLLEKFVAVLGG 567
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 568 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 623
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE------FLHIQTICDFA 402
+ G V AG Q +L + + +HI+ A
Sbjct: 624 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTPRPASPLMHIEGF--LA 681
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
L + G I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 682 ALTTSNQDGRVIL-----SRQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 736
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 737 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 796
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W +L + K +F E + V
Sbjct: 797 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGSLLGRLAARKKIFQEPKSAHQVE 856
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 857 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 916
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 917 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 976
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 977 RPPVLAKLPAWI 988
>gi|408390405|gb|EKJ69805.1| hypothetical protein FPSE_10005 [Fusarium pseudograminearum CS3096]
Length = 863
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 164/690 (23%), Positives = 288/690 (41%), Gaps = 102/690 (14%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK-------LLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
E P+K+ Y +RT ++ + + EL+ L + + + + LSSR+ LC+
Sbjct: 203 EEPIKIYYTSRTHSQLSQFITELRRPSFPPSLPTSLSKQEETKTEAVKLLPLSSRQRLCI 262
Query: 118 NSRVLAAENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG 173
N V + +++ C + ++ + E+ +T +F + ++ A LP
Sbjct: 263 NPAVSRLGSVQAINDRCSELQQPKSGQKCPFVPKEDLLSQTHQF-----RDSALATLP-- 315
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++DL GK CPY+ +R + A ++ Y LL + +++ S+V+
Sbjct: 316 --DIEDLHQLGKSLAVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEG-SIVIV 372
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLS----RINQEIERFKATDAGRLRAEYNRLV 289
DEAHNI + + ++ L L R ++++ + GR+ R++
Sbjct: 373 DEAHNIMDAVANVHAAEIKLSDLRRGRGMLGVYVKRFGKKLKGVNRVNVGRV----ARVI 428
Query: 290 EGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV-LRRLVQYLRGRLETENVE 348
+GL+ W+ P ++ R++ + + L+QY++ +E
Sbjct: 429 DGLS-------EWMDGALKFKQEHGIVDPNDLTRSKGIDQINMFELIQYIQDSKLAFKIE 481
Query: 349 KEGPVSFVASI-TAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
S+++ + + AG KT R LHSL+ FL L
Sbjct: 482 -----SYISHVESEEAGT--KTPRSSTPVLHSLV---------SFL--------IALTNL 517
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
+ G F +++ PD L + A + ++V++ GT+SP D Y
Sbjct: 518 SSEG-----RIFYQKIKGTPDIQLSYLLLSPTHAFSSIASSARAVILAGGTMSPFDDYKD 572
Query: 468 LL--NFHP--VVSRSFKMSLTRDCICPMVLTRG-SDQLPVSTKFDMRSDPGVARNYGKLL 522
L + P V + S + + +C L P F R D + G +
Sbjct: 573 HLFPSLEPDKVTTLSCGHVIPPENLCVWTLASPRPGAPPFEFSFQKRGDTEMITQLGLAI 632
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDS------GILKEIMQHKLVFIETQDVVETT 576
+ + S+VPDG+V FF SY Y+DE++A W S + + K +F ET+
Sbjct: 633 LNLCSLVPDGVVIFFPSYGYLDEVVAVWQKSQGASTQSVWDRLGTRKALFKETRGASSEE 692
Query: 577 LALDNYRKACDC----GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
+ L Y A G+GA+ SV GK++EGI+F GR V++ G+P+ S
Sbjct: 693 V-LQEYSDAIQGEKSNGKGALLLSVVGGKMSEGINFSDRLGRCVLVIGLPYPNIASPDWK 751
Query: 633 ARLEYLRDTFQ---IKEG---------------DFLTFDALRQAAQCVGRVIRSKADYGM 674
A++EY+ T + + +G DF +R Q +GR IR + DY
Sbjct: 752 AKIEYIETTTRNNLVAQGTTQEQAVSKAKQTARDFYENACMRAVNQSIGRAIRHRGDYAA 811
Query: 675 MIFADKRYSRHDKRSKLPGWILSHL-RDAH 703
++ D+RY R KLPGWI L D+H
Sbjct: 812 IVLVDRRYGTDRIRGKLPGWIRGGLVGDSH 841
>gi|84627555|gb|AAI11734.1| DDX11 protein [Homo sapiens]
Length = 906
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 172/672 (25%), Positives = 280/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD------EFLHIQTICDFA 402
+ G V AG Q +L + + +HI+ F
Sbjct: 514 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASVPQPASPLMHIE---GFL 570
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 571 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICIGVSNQPLEFTFQKRDLPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + S+V G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 687 EVGRILCNLCSVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGHLAARKKIFQEPKSAHQVE 746
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQACGQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 807 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 866
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 867 RPPVLAKLPAWI 878
>gi|328853665|gb|EGG02802.1| hypothetical protein MELLADRAFT_38383 [Melampsora larici-populina
98AG31]
Length = 791
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 172/684 (25%), Positives = 293/684 (42%), Gaps = 107/684 (15%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA-AE 125
P + + +RT ++ + ++EL+ G +++A+G SR NLCVN V A+
Sbjct: 164 PRSIYFTSRTHSQLSQFVSELR------KTSFGLGTRLIALG--SRSNLCVNEEVKKKAK 215
Query: 126 NRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGK 185
+ ++++ AC + PN + E V +++L + GK
Sbjct: 216 SLEALNEACTDLQKGVL-------PNDLNLSYARQSE-----------VRDIEELASLGK 257
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN-IDNVCI 244
++G CPY+ AR ++ A +V Y LL + + ++V++ DEAHN IDNV +
Sbjct: 258 ERGVCPYYGARKALRQAQIVTLPYNLLLQKSSRNALGISLT-DNVIIVDEAHNLIDNV-L 315
Query: 245 EALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLS 304
S S+ LE +N +I I++F+ G +LV GN
Sbjct: 316 AIHSTSISSNFLE-LVKNSFKI--YIKKFEKKLKGSNLVHLQQLVRVFECLGNY------ 366
Query: 305 NPALPSDILKEAVPGNIRRAEHFLHV--------------LRRLVQYLRGRLETENVEK- 349
D L +A+P N+ + E + + L +YL E++ + K
Sbjct: 367 -----CDELAKALPKNLGKHEEIITTNSLLQKTGVLDLLNMHDLEEYLN---ESKIINKI 418
Query: 350 EGPVSFVASITAHAGIDQKTLRF------CYERLHSLMLTLEITDTDEFLHIQTICDFAT 403
G + V ++ + D K + + R+ S ML L + D
Sbjct: 419 SGYATKVETVMNNTDSDDKAFKTRSTFVTGFYRIQSFMLALSNAEKD-----------GR 467
Query: 404 LVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
++ + R + DE+ + L+ + S + V +SV++ GT++PI
Sbjct: 468 VLSSSERSST------DEKKVVV---TLRYQLLNPSETFRDVASEARSVILAGGTMAPIS 518
Query: 464 -----LYPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
L+P L P F + + ++ + V+ G + P+ KF R D +
Sbjct: 519 DFRTQLFPYL---GPDQFLEFACAHIVPQENLLVRVVPHGPSKTPLELKFASRGDNKLLD 575
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
+ G+ + + ++V DGIVCFF SY+ +D + W SG+L + K VF E + +
Sbjct: 576 DLGQSISNICNVVKDGIVCFFPSYAILDSLRDRWKTSGLLSRLENRKKVFNEPKSSADVE 635
Query: 577 LALDNYRKACDC----GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
L +Y A GA+ F+V GK++EGI+F R VI+ G+P+ S L
Sbjct: 636 TTLKDYASAITSPTLPQTGALLFAVVGGKLSEGINFSNELCRAVIVIGIPYPNANSIELK 695
Query: 633 ARLEYLRDTFQIKE--GDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS 689
R++Y K G L + A + Q +G+ IR D+ +I D RY + +
Sbjct: 696 ERIKYAETLSGGKREAGAALYSNMAFKAVNQSIGQSIRHANDWSSIILLDSRYGTENSQK 755
Query: 690 KLPGWILSHLR--DAHLNLSTDMA 711
KLPGWI S L+ D L D+A
Sbjct: 756 KLPGWINSSLQISDNFGKLVKDLA 779
>gi|407037674|gb|EKE38739.1| DNA repair helicase, putative [Entamoeba nuttalli P19]
Length = 1034
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 185/771 (23%), Positives = 329/771 (42%), Gaps = 142/771 (18%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLI 71
FPY Y Q M +++A+ H L+E PTGTGKT+ LL L+ P+ ++++
Sbjct: 86 FPYQPPYQPQIEMMNSIQQAVKEGKHLLMESPTGTGKTLVLLH----STLTFPD--MRVV 139
Query: 72 YCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVD 131
Y +RT +++ + + E K + N I I L+SR C+ + + ++++
Sbjct: 140 YASRTHNQLAQVVNETKKIGN-----------IKGIVLASRDLYCIYNPIKTCDDKNY-- 186
Query: 132 AACRKRTASWVRA---LAAENPNIETCEF--FENYEKAASAAVLP-PGVYT--------L 177
W A L + +I C + F + K V+ VY
Sbjct: 187 ---------WCTAKPNLLLKLKHINPCPYRPFGDDGKVLPHVVMACQAVYKELNGIIKPQ 237
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV---AGII----SKEMQKESV 230
++L ++ CPY+ AR + +++ Y ++ + + I + Q+E V
Sbjct: 238 EELVKVCQKHNLCPYYYARWATVRSKLILCPYNFVTSVSIRHSSDIFLIDQNSAHQREFV 297
Query: 231 VVFDEAHNIDNVCIEALSV----SVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYN 286
+V DEAHN+++ +++L+ S+ QT+E + R+ Q E F L E
Sbjct: 298 LVMDEAHNVEDAFMDSLTFNFTESLLNQTIETIKFHKKRVKQIPENFLTIS---LLTELI 354
Query: 287 RLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
+E ++ W+ N +LP + +EH+L+ + +L
Sbjct: 355 STIESFSI-------WMKNRSLP-----------YKDSEHYLYGVFEDQAFLPF------ 390
Query: 347 VEKEGPVS-FVASITAHAGI------------DQKTLR----FCYERLHSLMLTLEITDT 389
VE+ P S + +I+ + + + +R F + + ++ +++ T
Sbjct: 391 VERSPPSSRLLEAISEYIKVVDDLDDLDIFTREPHAIRYINSFTTQYIEMILFYIQVFRT 450
Query: 390 DEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRF 449
T+ F +V T G ++ F P +P +LQ+
Sbjct: 451 P------TLTKFFKIVVTDHNGLREML--FRCLSPSLPMSLLQMVV-------------- 488
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS-----LTRDCICPMVLTRG----SDQL 500
+SV+ SGTLSP+ + L+ V + F +S L+ + + P G S L
Sbjct: 489 RSVIFASGTLSPMKAMAQELDIKEHVYKDFIISPGYRMLSTEHVVPPSRVFGRIIISSSL 548
Query: 501 PVSTKFDMRS--DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
S F ++ D + G + ++S G + FF SY+ ++ I+ W GI +
Sbjct: 549 GKSFIFTKKTSQDNEMIEQAGDTMFRVLSKSRGGALVFFSSYNMLNRIVELWKQHGIYTQ 608
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
+ + K +FIE++D E Y+ +GAVF V RGK++EGIDF RLVI+
Sbjct: 609 LNKLKAIFIESKDKNEFKKDFKEYQ--IQSKKGAVFLGVFRGKLSEGIDFGDDMARLVIV 666
Query: 619 FGVPFQYTLSKILLARLEY-----LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYG 673
G+P+ + + EY L+++ + ++ + ALR Q VGRVIR DYG
Sbjct: 667 VGIPYPSLGDINVNLKREYNNHENLKNSDCLSGSEWYSIQALRAVNQAVGRVIRHINDYG 726
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
+ DKRYS + + L GW+ L A N D+ ++F + +Q
Sbjct: 727 AFLLFDKRYSTNSVKEMLSGWMKKSLVVADKNWEQDL-----QDFFAQFSQ 772
>gi|344249237|gb|EGW05341.1| TFIIH basal transcription factor complex helicase subunit
[Cricetulus griseus]
Length = 141
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 90/111 (81%)
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIF 677
MFGVP+ YT S+IL ARLEYLRD FQI+E DFLTFDA+R AAQCVGR IR K DYG+M+F
Sbjct: 1 MFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVF 60
Query: 678 ADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
ADKR++R DKR KLP WI HL D++LNL+ D + +A+ FLR+MAQP+ +
Sbjct: 61 ADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYFLRQMAQPFHR 111
>gi|67470878|ref|XP_651401.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56468131|gb|EAL46015.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710566|gb|EMD49619.1| regulator of telomere elongation helicase rtel1, putative
[Entamoeba histolytica KU27]
Length = 1033
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 186/756 (24%), Positives = 325/756 (42%), Gaps = 113/756 (14%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKLI 71
FPY P Q M +++A+ H L+E PTGTGKT+ LL L+ P+ ++++
Sbjct: 86 FPYQPYQP-QIEMMNSIQQAVKEGKHLLMESPTGTGKTLVLLH----STLTFPD--MRVV 138
Query: 72 YCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVD 131
Y +RT +++ + + E K + N I I L+SR C+ + + ++++
Sbjct: 139 YASRTHNQLAQVVNETKKIGN-----------IKGIVLASRDLYCIYNPIKTCDDKNY-- 185
Query: 132 AACRKRTASWVRA---LAAENPNIETCEF--FENYEKAASAAVLP-PGVYT--------L 177
W A L + +I C + F + K V+ VY
Sbjct: 186 ---------WCTAKPNLLLKLKHINPCPYRPFGDDGKILPHVVMACQAVYKELNGIIIPQ 236
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV---AGII----SKEMQKESV 230
++L ++ CPY+ AR + +++ Y ++ + + I + Q+E V
Sbjct: 237 EELVKVCQKHNLCPYYYARWATVRSKLILCPYNFVTSVSIRHSSDIFLIDQNSAHQREFV 296
Query: 231 VVFDEAHNIDNVCIEALSV----SVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYN 286
+V DEAHN+++ +++L+ S+ QT+E + RI Q E L E
Sbjct: 297 LVMDEAHNVEDAFMDSLTFNFTESLLNQTIETIQFHKKRIKQTPENLLTIS---LLTELI 353
Query: 287 RLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE--T 344
VE ++ W+ N +LP + + G + + FL + R R LE +
Sbjct: 354 STVESFSI-------WMKNRSLPYKDSEHYLYG-VFEDQAFLPFVERSPSSSR-LLEAIS 404
Query: 345 ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATL 404
E ++ + + T + + F + + ++ +++ T T+ F +
Sbjct: 405 EYIKVVDNLDDLDIFTREPHVIRYINSFTTQYIEMILFYIQVFRTP------TLTKFFKI 458
Query: 405 VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
V T G ++ F P +P +LQ+ +SV+ SGTLSP+
Sbjct: 459 VITDYNGLREML--FRCLSPSLPMSLLQIVV--------------RSVIFASGTLSPMKA 502
Query: 465 YPRLLNFHPVVSRSFKMS-----LTRDCICPMVLTRG----SDQLPVSTKFDMRS--DPG 513
+ L+ V + F +S L+ + + P G S L S F ++ D
Sbjct: 503 MAQELDIKEHVYKDFIISPGYRMLSTEHVVPPSRVFGRIIISSSLGKSFIFTKKTSQDNE 562
Query: 514 VARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV 573
+ G + ++S P G + FF SY+ ++ I+ W GI ++ + K +FIE++D
Sbjct: 563 MIEQAGDTMFRVLSKSPGGALVFFSSYNMLNRIVELWKQHGIYTQLNKLKAIFIESKDKS 622
Query: 574 ETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA 633
E Y+ +GAVF V RGK++EGIDF RLVI+ G+P+ +
Sbjct: 623 EFKKDFKEYQ--IQSKKGAVFLGVFRGKLSEGIDFGDDMARLVIVVGIPYPSLGDINVNL 680
Query: 634 RLEY-----LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ EY L++ + ++ + ALR Q VGRVIR DYG + DKRYS + +
Sbjct: 681 KREYNSHENLKNPDCLSGSEWYSIQALRAVNQAVGRVIRHINDYGAFLLFDKRYSTNSVK 740
Query: 689 SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
L GW+ L A N D+ ++F + +Q
Sbjct: 741 EMLSGWMKKSLVVADKNWEQDL-----QDFFTQFSQ 771
>gi|358383392|gb|EHK21058.1| hypothetical protein TRIVIDRAFT_59546 [Trichoderma virens Gv29-8]
Length = 872
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 169/709 (23%), Positives = 293/709 (41%), Gaps = 92/709 (12%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLL--------HNYQTRHLGPAAKILAIGLSSRKNLC 116
E +K+ Y +RT ++ + + EL+ + + + + LSSR+ LC
Sbjct: 201 EEKIKIYYTSRTHSQLSQFITELRRPVFPSSLPPSVAKGSDVSSTEPVKLLPLSSRQKLC 260
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+N V + +++ C + + + P E + +A A LP
Sbjct: 261 INPSVARLGSVQAINDRCTELQQAKSSTKCSFVPKEELLSQTHQFRDSA-LATLP----D 315
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++DL GK CPY+ +R + A ++ Y LL + +++ +VV+ DEA
Sbjct: 316 IEDLHLLGKSLSICPYYASRVALPGAEIITLPYPLLLQRSAREALGIKLEG-NVVIIDEA 374
Query: 237 HNI----DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
HNI NV L +S R+ + + R ++++ + GR+ R+++GL
Sbjct: 375 HNILDAISNVHAAELQLSDLRRGRQMLGVYVKRFGKKLKGINRVNVGRV----GRVIDGL 430
Query: 293 ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV-LRRLVQYLRGRLETENVEKEG 351
+ WL + P ++ R + + + L+QY++ +E
Sbjct: 431 S-------EWLEGALKLKNEHGIVDPNDLTRHKGIDQINIYELIQYIQESKLAYKIE--- 480
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
S+VA + + + L + ++++ I T+ +G+ R
Sbjct: 481 --SYVAHVESEGENKKPGLSKAGTPVLHMLVSFLIALTN--------------LGSEGRI 524
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----LYP 466
F + + D L + A + ++V++ GT+SP L+P
Sbjct: 525 F------YQKTQGATADVKLTYLLLSPTHAFSSIASSARAVILAGGTMSPFQDYKDQLFP 578
Query: 467 RLLNFHPVVSRSFKMSLTRDCICPMVL-TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
L N V S S + + +C L + ++ P F R + + G ++ +
Sbjct: 579 TLDNTK-VTSLSCGHVIPAENLCVWTLASTNTESPPFEFSFKHRGNKEMMNQLGLAILNV 637
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHKLVFIETQ-DVVETTL- 577
+IVPDG+V FF SY Y+DEIIA W + + K VF +T+ + E L
Sbjct: 638 CNIVPDGVVVFFPSYGYLDEIIAVWQQRQGGSSQTTWDRLQARKFVFRDTKGESSEEVLR 697
Query: 578 ----ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA 633
A+ R A D GA+ SV GK++EGI+F GR V++ G+P+ S A
Sbjct: 698 DYSEAILGTRPAGDKHTGALLLSVVGGKMSEGINFSDRLGRCVMVVGLPYPNIASPDWKA 757
Query: 634 RLEYLRDTFQ---IKEG---------------DFLTFDALRQAAQCVGRVIRSKADYGMM 675
+LEY+ T + IKEG DF +R Q +GR IR + DY +
Sbjct: 758 KLEYIESTTEARLIKEGQSSSDATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDYAAI 817
Query: 676 IFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
I D+RY R+KLPGWI + L+ + + F RK +Q
Sbjct: 818 ILVDRRYGTPRIRNKLPGWIQNGLQQDSHEKGLGVLMGALGGFFRKKSQ 866
>gi|290991586|ref|XP_002678416.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284092028|gb|EFC45672.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 902
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 160/658 (24%), Positives = 286/658 (43%), Gaps = 69/658 (10%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P K+IYC+RT ++ + + EL R + K+ ++SR+ LC N VL
Sbjct: 238 ETP-KIIYCSRTHSQLNQFVQEL--------RKTEFSKKVRVSNIASRQVLCNNEDVLYR 288
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP--------GVYT 176
+ + + +L A N E C++ + +KA S P V+
Sbjct: 289 ----------KTKNGNIQNSLNAIN---EKCQYLRD-KKACSYDNDPSLFKDHMTVKVHD 334
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++DL GK+ C YF R + + ++ Y L+ + + K+ VV+ DEA
Sbjct: 335 IEDLLDLGKRLKICSYFGTRKALPISELICMPYNSLIHEQTRKSLGISTLKDCVVIIDEA 394
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
HN+ N + SV + L L N +FK + + NRL L +
Sbjct: 395 HNLINAIHQMHSVELDITQLYLVNETL---NSYYTKFKNRLSSTNQTNINRL---LTIIN 448
Query: 297 NLPNAWLSNPALPS--DILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
N+ +L+ PS +I+ + G+ F+ + LV +L+ N+
Sbjct: 449 NMI-TYLNTVKKPSTLNIIADEGTGS-NDIGGFIVSITDLV--FETKLDNINLFD----- 499
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY-TRGFS 413
+A + + +K L ER S T+ I + ++ T + S
Sbjct: 500 -IAEFIEKSDLTKK-LNMFMERQDSNNQTVTIHNNKTVKRNNYSANYVQYNATKPSIDVS 557
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----LYPRL 468
II P + + ++ + S+ + + +SV++T GT+ PI ++P+
Sbjct: 558 KIITPATSNIA--VNNFIKFLLLNPSVYFQSILKEARSVILTGGTMEPIQQLIQQVFPKT 615
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS-DPGVARNYGKLLVEMVS 527
+ + + K + ++ P+ L++G D + + F R + + ++ GK++V + +
Sbjct: 616 ESSKIHIYQCDKHIVPQNHFLPIALSKGVDDIVLDFTFKNRQKNDALTKSLGKMIVNLCN 675
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN----YR 583
IVPDG+V FF SY Y + W ++GI+ +I + K E E +L+ Y+
Sbjct: 676 IVPDGVVLFFPSYQYEKTVFEYWKNNGIIGQIEKKKKFLREASTNEEPNSSLEKILQEYK 735
Query: 584 KACDCG------RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
K D G+V V GK++EGI+F YGRL+I+ G+P+ T L+ + +
Sbjct: 736 KIIDHNFGNSRYNGSVLSCVVGGKLSEGINFSDGYGRLIIVVGMPYPNTTDPELVEQQNF 795
Query: 638 LRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
T ++ +G++L + Q +GR IR DY ++ DKRY + +KL WI
Sbjct: 796 FEKTTKVSKGEYLDNLCMNGVNQSIGRAIRHSKDYATVLLLDKRYHQSRLTNKLSKWI 853
>gi|182705254|sp|Q92771.3|DDX12_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX12; AltName:
Full=CHL1-related protein 2; Short=hCHLR2; AltName:
Full=DEAD/H box protein 12
Length = 950
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 168/672 (25%), Positives = 279/672 (41%), Gaps = 64/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ +C+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 246 TKIYHCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVRSLGSV 297
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 298 QLINNRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 357
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 358 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 416
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 417 LIDTTTSMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 476
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS + +D L ++ NI + V R + + R E
Sbjct: 477 NIKQNPNTQSLSQTGMELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 532
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD------EFLHIQTICDFA 402
+ G V AG Q +L + + +HI+ F
Sbjct: 533 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASVPQPASPLMHIE---GFL 589
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 590 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 645
Query: 463 DLYPRLL------NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
+ + L VV S + D I P+V+ G P+ F R P +
Sbjct: 646 SNFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGVSNQPLEFTFQKRDLPQMMD 705
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +V G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 706 EVGRILCNLCGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 765
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 766 QVLLAYSRCLQACGQERGPVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 825
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 826 ELQEKMAYLDQTLPRAPGQAHPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 885
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 886 RPPVLAKLPAWI 897
>gi|17506821|ref|NP_492769.1| Protein RTEL-1 [Caenorhabditis elegans]
gi|75018688|sp|Q93575.3|RTEL1_CAEEL RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|3876338|emb|CAB02102.1| Protein RTEL-1 [Caenorhabditis elegans]
Length = 994
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 187/774 (24%), Positives = 331/774 (42%), Gaps = 132/774 (17%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE-N 66
++V FP++ Y Q +M + LD K LE PTGTGKT++LL ++V + E
Sbjct: 17 LSVKFPFEP-YECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQKETK 75
Query: 67 PVK--------------------------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGP 100
P+ + Y +RT ++E+ + EL +T +
Sbjct: 76 PLDFATWQTSGAGGAEKTDEKLKSAYVPTIFYASRTHSQLEQVVHELN-----RTEYKWV 130
Query: 101 AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFEN 160
IL SR++ C+N +V + + R A R L ++ C ++
Sbjct: 131 KTTILG----SREHFCINQKVKKIKESN--------RQAHVCRGLVSKR----ACHYYNK 174
Query: 161 YEKAASAAV---LPPG-VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPK 216
++ + + L G ++D G Q CPYF++R + A +++ Y Y++DPK
Sbjct: 175 FDACTTDKMTEFLDKGEAMDIEDFVKLGTQNSLCPYFMSRQRSETAELILLPYNYIIDPK 234
Query: 217 VAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKAT 276
+ ++ K S+V+FDEAHN++++C ++ A + I IE K
Sbjct: 235 MRRRYKLDL-KNSIVIFDEAHNLESIC----------ESNASAELTSTSIALCIEELKKV 283
Query: 277 DAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRR--- 333
A + E E A G +A + D+ K+ + R E + VL +
Sbjct: 284 LALLVDEEETARSEADAETGAFGSAKI-------DLTKKLIEN--LRTEDLMTVLEKIFS 334
Query: 334 LVQYLRGRLETENVEKEGPVSFVAS-------ITAHAGIDQKTLRFCYERLHSLMLTL-- 384
L + + + ++ P+S AS A AG D ++ + L + L
Sbjct: 335 LEEEMDKLFGSSQLKSVPPLSGKASDGEILLETLAKAGFDANSVERLVDVLRDAISYLLS 394
Query: 385 ---EITDTDEFLHIQTICDF------------ATLVGTYTRGFSIIIEP---------FD 420
E+ T++ ++ + DF A VG T ++P +
Sbjct: 395 KNEEVALTEKGDGMEKVADFLLSIYSTHAQDVAAAVGEETVKLVDRVDPKTVARNCKLYI 454
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPID--LYPRLLNFHPVVSR 477
++ ++ C AS++++ + R ++V++ SGTLSPI Y LNF ++
Sbjct: 455 QKDKDNEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGAILEN 514
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
+L + + ++TRG + ++ F R + + L+ ++ ++P GI+ FF
Sbjct: 515 EH--ALKQVPVLTSIVTRGK-RGGLAGSFQNRKNLDYVTGVAEALLRVMEVIPQGILIFF 571
Query: 538 VSYSYMDEIIATW--------NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG 589
SYS MDE++ATW ++ +++ + K V +E + E Y +
Sbjct: 572 SSYSQMDELVATWKTTKWSSNSNESFWEKMEKTKRVVVEPRAKEELAAIRLRYTQGVSEQ 631
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QYTLSKILLARLEYLRDTFQ 643
GA +V RGKV+EGIDF R VI+ G+P+ + L K+ L L +DT
Sbjct: 632 HGAALLAVCRGKVSEGIDFCDAESRAVIIIGIPYPPIHDERVVLKKMYLDDLMGRKDTKS 691
Query: 644 IKEG--DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
++ D+ +A R Q +GRV+R K D+G ++ D RY+ K P W+
Sbjct: 692 ERQSSQDWYQMEAFRAVNQAIGRVLRHKDDFGTVVLMDTRYASA-KPEMFPKWL 744
>gi|212545032|ref|XP_002152670.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210065639|gb|EEA19733.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 887
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 181/765 (23%), Positives = 320/765 (41%), Gaps = 127/765 (16%)
Query: 20 EQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP------ENPVKLIYC 73
++Y E +++ G +E + + T+ALL V + EN ++ YC
Sbjct: 168 DEYESDTETAKSVSISGFSGIEGLSAS--TVALLDRFKGRVTGQKDNEGDNENQTRIYYC 225
Query: 74 TRTVHEMEKTLAELKLLH-------------NYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+RT ++ + EL+ ++ + H I + L SRK LC+N R
Sbjct: 226 SRTHSQLSQFAQELRRVNLPSSLPSLQESAEGEKQEHTELEEVIKHLTLGSRKQLCINPR 285
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA-----SAAVLPPGVY 175
V N +++ C + S V A + C + E VL V
Sbjct: 286 VSNLGNATAINERCMELQQSGVAA-------DKRCSYLPTKESEGMLFDFRDRVLST-VQ 337
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
++D+ GKQ CPY+ AR + ++ Y LL + + ++ +V+ DE
Sbjct: 338 DIEDISQVGKQLAICPYYAARKAIDQCEIITLPYPLLLQRSSREALDLSL-RDHIVIIDE 396
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGL 292
AHN+ + SVSV TLE +L ++ +F+ G+ R + RLV L
Sbjct: 397 AHNLMDAISNLHSVSV---TLEQLRTSLFQLTTYARKFQTRLKGKNRVYVTQVIRLVSAL 453
Query: 293 ALRGNLPNAWLSNPALPSDIL---KEAVPG------NIRRAEHFLHVLRRLVQYLRGRLE 343
A NL + LS+ S+++ + V G N + +L +L + + G +E
Sbjct: 454 A--ENLQS--LSDKHKSSEVIVQYSDLVSGKGVDQINPYKLTRYLQE-SKLARKVDGYVE 508
Query: 344 TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFAT 403
N ++G V+ A + T+ ++ + S +LTL + +DE D
Sbjct: 509 NAN-NQDGKVN-----NGKATRENTTIPVLFQ-VQSFILTL-MNPSDEGQLFLNKADGGV 560
Query: 404 LVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
L+ ++++P H D + D ++V++ GT+SP+
Sbjct: 561 LLRY------LLLDP----TSHFRD----------------IVDEARTVILAGGTMSPMS 594
Query: 464 LYP-RLLNF---HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
Y L ++ + + SF + + +LT+G + FD R+ + + G
Sbjct: 595 DYSDHLFSYVSPEKLDTYSFGHVIPPKNLTARILTKGVLGSDFNFTFDQRNSDSMITDLG 654
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATW---NDSG----ILKEIMQHKLVFIETQD- 571
+ + + +++PDG+V FF SY Y+++++ W N +G I EI ++K + E+ +
Sbjct: 655 QTIANICAVIPDGVVVFFPSYDYLNQVLNAWRKPNKTGGAVSIFAEIEKYKPIVYESNNH 714
Query: 572 --VVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
T L Y K + G GA+ SV G+++EGI+F GR V++ G+PF S
Sbjct: 715 KKESNTDDTLLEYSKKVESGSGALLLSVVGGRLSEGINFSDKLGRGVLIVGLPFPNIHSA 774
Query: 630 ILLARLEYLR----------------------DTFQIKEG-DFLTFDALRQAAQCVGRVI 666
+ A++ ++ +T G DF +R QC+GR I
Sbjct: 775 VWKAKIGHIEKQTYAKLTQNETELPVSRRREAETAAKAAGRDFFENSCMRAVNQCIGRAI 834
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHL-RDAHLNLSTDM 710
R + DY ++ D+RY + KLP WI L A N+ D+
Sbjct: 835 RHRNDYAAIVLIDRRYETQRIQGKLPTWIRQSLASSATSNIRGDL 879
>gi|380021224|ref|XP_003694471.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Apis
florea]
Length = 878
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 174/761 (22%), Positives = 310/761 (40%), Gaps = 147/761 (19%)
Query: 18 YPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY---------VLSKPENPV 68
Y Q + M +L + +CLLE PTG+GKT+ALL + ++ + EN
Sbjct: 166 YSCQIAVMNKLIQGCVKGENCLLESPTGSGKTLALLCGVLAWHDHYIGEGKQTTSCENNE 225
Query: 69 K-------------------------------------LIYCTRTVHEMEKTLAELKLLH 91
K + Y TRT ++E+ + EL
Sbjct: 226 KDCCQESSKKCMLDSDDSYEDYEDLLEDAKGKKLKVPRIFYGTRTHKQIEQVVKEL---- 281
Query: 92 NYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK--RTASWVRALAAEN 149
R K + I LSSR+ C+ + +N+ + C + TA
Sbjct: 282 ----RKTCYKHKKMTI-LSSREYTCIQN---TTKNKTEL---CNELLDTAKHKGCPYYNE 330
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
N +T F E+ L P ++ ++DL GK++ CPYF AR ++ A+++ Y
Sbjct: 331 TNKKTIGTFWALERFG----LRP-IWDIEDLVDIGKEKESCPYFAARTLMDTADIIFCPY 385
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI-NQ 268
Y++DP + + +M K+ V++ DEAHNI+++ + SVS R L+ + Q
Sbjct: 386 NYIIDPNIRESLQLDM-KDQVIILDEAHNIEDISRDVSSVSFREDHLQATAHECETLAKQ 444
Query: 269 EIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVP-GNIRRAEH- 326
E F D L L+ A D+ + V N R+
Sbjct: 445 RAEDFTTYDT-------------------LKTFLLNVMAFLKDMSLDKVDYNNENRSSKY 485
Query: 327 --------FLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLH 378
FL + + L E + K ++S T +
Sbjct: 486 WTGVELSMFLMACNKAISDLNKAKEDNRMYKSITKPIISSSTKMT-------------IE 532
Query: 379 SLMLTLEITDTDEFLHIQTICDFATLVGTY---TRGFSIIIEPFDERMPHIPDPVLQLSC 435
+LM T+ + + E+ + C + V + + I ++ ++R+ L+L C
Sbjct: 533 NLMYTIRMITSKEYQNDYRACVIESTVKDFKHMSENAWISVKKCEQRVR-----TLKLVC 587
Query: 436 HDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP----- 490
+ +A P+ + +++ SGTL+P +F + SF L + P
Sbjct: 588 MNPGVAFSPLALNARCIILASGTLTPT------ASFQSELGTSFTHVLNTGHVIPKEQVY 641
Query: 491 -MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
+ +G + + + + + + G++L+++ +P GI+CFF SY+ M+ +
Sbjct: 642 ATCIPKGPNGILLKANYQIVNTWQFQDELGQVLLDVCESIPHGILCFFSSYNVMNTQMER 701
Query: 550 WNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDC------GR--GAVFFSVARGK 601
W + I +I K VFIE + T ++ YR+ + GR GA+F +V RGK
Sbjct: 702 WKQNSIWSKITSVKTVFIEPRHGGGLTDIMNEYREVIEYTSTESKGRITGALFLAVFRGK 761
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----DFLTFDALR 656
VAEGIDF + R V+ G+P+ ++ ++ Y + + +G ++ + A R
Sbjct: 762 VAEGIDFRDNEARCVVTVGIPYAVRKDPVIDMKMTY--NDMNVSKGLLRGSEWYSIQAYR 819
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
Q +GR +R D+G ++ D+R+ + LP W+ S
Sbjct: 820 ALNQALGRCLRHIHDWGAVLLVDERFLVSQNKENLPKWVKS 860
>gi|18543219|ref|NP_569898.1| CG11403 [Drosophila melanogaster]
gi|6018910|emb|CAB58099.1| EG:33C11.2 [Drosophila melanogaster]
gi|7290134|gb|AAF45598.1| CG11403 [Drosophila melanogaster]
gi|16197995|gb|AAL13769.1| LD24267p [Drosophila melanogaster]
gi|220945784|gb|ACL85435.1| CG11403-PA [synthetic construct]
gi|220955538|gb|ACL90312.1| CG11403-PA [synthetic construct]
Length = 861
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 182/697 (26%), Positives = 294/697 (42%), Gaps = 102/697 (14%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV----- 121
PV++ +C+RT ++ + +AEL+ + Q+ + +I L SR+ LC N V
Sbjct: 187 PVQIFFCSRTHSQLAQIVAELRKTPHGQS--------VRSISLGSRQQLCGNPAVRKLKH 238
Query: 122 LAAENRDSVDAACRKR--TASWVRALAAENPNIETCEFFENYEKAASA-------AVLPP 172
+ N +D A +K S L AE + C F KAAS A+ P
Sbjct: 239 VGLMNERCLDMATKKARPNPSKKSRLTAEANS--RCPF-----KAASLVESLRDLALTEP 291
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+++L G G C Y+ +R V+ A +++ YQ LL + + K S+V+
Sbjct: 292 --LDIEELANEGTACGGCSYYASRSAVEHAQLILLPYQLLLQKSARNQLGISL-KGSIVI 348
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQEIERFKAT 276
DEAHN+ + + + RQ LE A T+NL +INQ I +
Sbjct: 349 VDEAHNLLDSVAQLHGSEISRQQLERAKVQISGYKDHFQKRFTTKNLLKINQIIFIIR-- 406
Query: 277 DAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLR---- 332
RL++ L R L + S ++ E NI E R
Sbjct: 407 ----------RLLKILDQRKELQSNGCSM-MRTYELTAEGDFFNIDLCELLDFCARTRFA 455
Query: 333 RLVQYLRGRLETEN--VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
R VQ R+E E E + PVS S+ ++ L+ + + + + D
Sbjct: 456 RKVQGRADRMEREPRPSENQAPVSTARSLILQRLASEQKLKEKTKSVKRRVEDINKEDKA 515
Query: 391 EFLH-----------------IQTICDFATLVGTYTRGFSIIIEPFDERMPHIP-DPVLQ 432
E L I+ + F + + I+++P + +I DP Q
Sbjct: 516 EELQEQQKPTKKPVEEVAPSPIRPLLAFLETLTSNAEDGRILVDPVGGTLKYILLDPAEQ 575
Query: 433 LSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLN--FHPVVSRSFKMSLTRDCIC 489
+ + +++VI GT+ P +L +L +V R + + D I
Sbjct: 576 FA---------DIVAEARAIVIAGGTMQPTKELKEQLFTGCHDRLVERFYNHVVANDAIL 626
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
P V++ G P+S KF R + R +L + +VP G+VCF SY Y+D++
Sbjct: 627 PFVISNGPSGAPLSFKFAHRGSAEMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKY 686
Query: 550 WNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGID 607
SG L+ I K VF E E LDNY A GA+ SV GK++EG++
Sbjct: 687 LEQSGTLETISGRKSVFREVSGSAEQL--LDNYALAIKRPASYGALLLSVVGGKLSEGLN 744
Query: 608 FDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVI 666
F GR V++ G+P+ +LS L R+++L + G ++ ++ QC+GR +
Sbjct: 745 FADDLGRAVLVVGLPYSNSLSPELRQRMQHLDEKLGPGAGNEYYENLCVKAVNQCIGRAV 804
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
R DY + DKR++ R KLP WI H+ +A+
Sbjct: 805 RHIKDYACVYLLDKRFADPKIRGKLPKWISRHIVEAN 841
>gi|342878343|gb|EGU79689.1| hypothetical protein FOXB_09802 [Fusarium oxysporum Fo5176]
Length = 864
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 165/691 (23%), Positives = 288/691 (41%), Gaps = 110/691 (15%)
Query: 68 VKLIYCTRTVHEMEKTLAELK-----------LLHNYQTRHLGPAAKILAIGLSSRKNLC 116
+K+ Y +RT ++ + + EL+ L + +T+ A K+L LSSR+ LC
Sbjct: 204 IKIYYTSRTHSQLSQFITELRRPSFPPSLPTSLAKSEETKT--EAVKLLP--LSSRQRLC 259
Query: 117 VNSRVLAAENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP 172
+N V + +++ C + ++ + E+ +T +F + ++ A LP
Sbjct: 260 INPTVSRLGSVQAINDRCSELQQPKSGQKCPFVPKEDLLSQTHQF-----RDSALATLP- 313
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
++DL GK CPY+ +R + A ++ Y LL + +++ SVV+
Sbjct: 314 ---DIEDLHQLGKSLSVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEG-SVVI 369
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLS----RINQEIERFKATDAGRLRAEYNRL 288
DEAHNI + + ++ L L + ++++ + GR+ R+
Sbjct: 370 IDEAHNIMDAVANVHAAEIKLSDLRRGRAMLGVYVKKFGKKLKGVNRVNIGRV----GRV 425
Query: 289 VEGLA--LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
++GL+ + G L P+D+ + P I + F L+QY++
Sbjct: 426 IDGLSEWMDGALKFKQEHGIVDPNDLTR---PKGIDQINMF-----ELIQYIQESKLAFK 477
Query: 347 VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
+E S+++ + + + KT R LH+L+ L + + +
Sbjct: 478 IE-----SYISHVESE-DTNSKTPRSSSPVLHTLVSFL--------IAFTNLSSEGRIFY 523
Query: 407 TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID--- 463
+G + PD L + A + ++VV+ GT+SP D
Sbjct: 524 QKIKGLA-------------PDIQLSYLLLSPTYAFSSIASSARAVVLAGGTMSPFDDYK 570
Query: 464 --LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG-SDQLPVSTKFDMRSDPGVARNYGK 520
L+P L + + S + + +C L P F R D + G
Sbjct: 571 DHLFPSL-EPEKITTLSCGHVIPPENLCVWTLASSRPGAPPFEFSFQKRGDTEMITQLGL 629
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATW-----NDSGILKEIMQHKLVFIETQDVVET 575
++ + S+VPDG+V FF SY Y+DE++ W N + K +F E++
Sbjct: 630 AILNLCSLVPDGVVIFFPSYGYLDEVVTVWQKSQGNAQPTWDRLASRKALFKESRGASSD 689
Query: 576 TLALDNYRKAC----DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
+ L Y A G+GA+ SV GK++EGI+F GR VI+ G+P+ S
Sbjct: 690 EV-LQEYSDAILGEKSNGKGALLLSVVGGKMSEGINFSDRLGRCVIVIGLPYPNIASPDW 748
Query: 632 LARLEYLRDTFQ-------------IKEG-----DFLTFDALRQAAQCVGRVIRSKADYG 673
A++EY+ T Q I +G DF +R Q +GR IR + DY
Sbjct: 749 KAKIEYIETTTQNNLTAQGVAKEEAISKGKQTARDFYENACMRAVNQSIGRAIRHRGDYA 808
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHL-RDAH 703
++ D+RY R KLPGWI L +D+H
Sbjct: 809 AIVLVDRRYGTERIRGKLPGWIRGGLVKDSH 839
>gi|340378232|ref|XP_003387632.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Amphimedon queenslandica]
Length = 886
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 163/698 (23%), Positives = 294/698 (42%), Gaps = 110/698 (15%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
+ VK+ Y +RT ++ + + E+K T + I L SR+ C+N V
Sbjct: 196 DQTVKIFYASRTHSQLTQFVHEVKKTSYKDT--------VSVIPLGSRQTCCLNKSVTKL 247
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIET----------CEFFE--NYEKAASAAVLPP 172
++ ++ C + + ++ +N ++T C++++ N E A+
Sbjct: 248 QSISLINERCIELQKNKKKSSTRDNDTVKTKRHRTVNSDGCDYYKLNNIETMRDLAL--D 305
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+ ++ L G+ CPY+ R+ V A ++V Y LL + ++ K ++V+
Sbjct: 306 EIQDIEQLVTLGRDISGCPYYATRYAVPHAQLIVLPYNILLHSNTRDAVGIKL-KGNIVI 364
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE-------- 284
DEAHN+ + SV + T+ + S++ Q +R+++ RL+A+
Sbjct: 365 IDEAHNLIDTISSIHSVHI---TMHQIQKTHSQLLQYRDRYQS----RLKAKNLMYIDQI 417
Query: 285 ------YNRLVEGLALRGNLPNAWLSNPALP------------SDILKEAVPGNIRRAEH 326
+ RL L + PN S + ++ L +A NI +
Sbjct: 418 LFVLISFQRL---LTRSSDTPNPHTSTGTINQSQQEHCELVRLNEFLLKAKIDNINMFKL 474
Query: 327 FLHVLR-RLVQYLRGRLET-----ENVEKEGPVSFVASITAHAG-IDQKTLRFCYERLHS 379
+ + ++ + L G E+ ++ + + +S+ H G ID+ +R +
Sbjct: 475 LQYCKKSQIAKKLNGFAESYQRDEATIKDDIGANTSSSVVRHQGDIDRDGIRSPLMIIQQ 534
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
+ +L D D C I+I+ + +L S H
Sbjct: 535 FIESLTTADQD--------C-------------RIVIKQNSSSQSSLKYLLLNPSVH--- 570
Query: 440 LAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-VSRSFKMS----LTRDCICPMVL 493
+ ++VV+ GT+ P D +L V + R F+ S + D + P+ L
Sbjct: 571 --FTDIVKEARAVVLAGGTMQPFSDFKEQLFTGAGVPIDRFFEFSCGHVIGDDQLLPLTL 628
Query: 494 TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
++G+ + ++ R D + G+ + +V+IVP G+VCFF SY Y + W +
Sbjct: 629 SKGTSGYTFNFNYEQRQDKQMIIELGRTISNIVTIVPGGVVCFFPSYEYEKLVFNIWEKN 688
Query: 554 GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG------RGAVFFSVARGKVAEGID 607
G+L I K +F E + + L L Y + + GA+ V GK++EGI+
Sbjct: 689 GLLDRIANKKQIFREPKLASQAELVLSQYARCIEVCISVSSLTGALMSCVVGGKLSEGIN 748
Query: 608 FDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQI----KEGDFLTFDAL--RQAAQC 661
F + GR VIM G+P+ S L+ ++EYL T ++ K + +D L + Q
Sbjct: 749 FSDNLGRCVIMVGLPYPNIKSPELIEKMEYLNSTQKVDVSSKSPGQMHYDNLCMKAVNQS 808
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GR IR DY +I D+RYS SKLP WI S L
Sbjct: 809 IGRAIRHANDYATIILIDQRYSHPSVYSKLPNWISSQL 846
>gi|321471679|gb|EFX82651.1| hypothetical protein DAPPUDRAFT_48831 [Daphnia pulex]
Length = 720
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 177/697 (25%), Positives = 308/697 (44%), Gaps = 109/697 (15%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + + E + +TR L+SR++ C++ V + N++
Sbjct: 2 KIFFGTRTHKQITQVVKEFRRTMYCKTR---------MTVLASREHACIHPDVSRSFNKN 52
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVY------TLQDLRA 182
C++ N +T E N + +L VY ++DL
Sbjct: 53 E---GCQQL-------------NDQTSE--SNLYRTRGIEMLSKHVYGYDNGWDIEDLVG 94
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNI 239
G++ CPY+ +R +++ A +V Y YL+DP V K M S+++ DEAHNI
Sbjct: 95 LGRKLQRCPYYASRDLMEQAEIVFVPYNYLIDPAV----RKRMHIPINGSIIILDEAHNI 150
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRI-NQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
++ A S + ++ A + ++ N ++ K+ D RL+ + ++L + + NL
Sbjct: 151 EDSARAAASGAFSQEDFRLALNDCEKVTNVRVKDQKSKD--RLK-QISKLAQFSSYMMNL 207
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV-A 357
+ A S EA I + FL L L +Y N+ E +SFV
Sbjct: 208 ----MDGMAPKSSFDDEA----IMTGKEFLDKLV-LDEY------GPNILSE--LSFVIE 250
Query: 358 SITAHAGIDQKTLRFCYERLH----------------SLMLTLEITDTDEF-LHIQTICD 400
ID K + RLH +LML E T D++ + + +
Sbjct: 251 EGEEEPEIDSKLVD---PRLHLLATTRATLEDFLTIVNLMLGDEQTHLDDYQVAVARTSN 307
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
F + T+ F R H VL+L C + ++ +K + +S+++TSGTLS
Sbjct: 308 FVIISNYLTQVFLNKFSSSPSRWTH----VLKLWCLNPAIVLKQIRQTTRSIIVTSGTLS 363
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPM--VLTRGSDQLPVSTKFDMRSDPGVARNY 518
P+D Y L F ++L + P V Q P STK + Y
Sbjct: 364 PLDSYASELGI------DFMITLEASHVIPANRVWIASISQGPRSTKLNGSYKTTSTFEY 417
Query: 519 ----GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD--V 572
G+L++ + +P G++CF SYS +++++A W D+G+ + + K + E+++
Sbjct: 418 QDELGRLMLSVCQTIPHGVLCFLPSYSLLEKLVARWQDTGLWQHLSAIKTLVCESRNSSA 477
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
E TL D Y D GA+ +V RGKV+EG+DF + R V+ G+PF Y K +
Sbjct: 478 FEETLK-DFYSAIEDSQSGALMLAVCRGKVSEGLDFTDNNARAVVCVGIPFPYLKDKQVE 536
Query: 633 ARLEY--LRDTFQ--IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ +Y + T + ++ A R Q +GR IR K D+G ++ D R+++ +
Sbjct: 537 LKRKYNDKKSTCSSLLSGSEWYEIQAFRALNQALGRCIRHKGDWGAILLVDDRFAKTPRY 596
Query: 689 -SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
++L W S +R H + M LH EF +++ +
Sbjct: 597 VNQLSKWARSSIR--HYDYFAPM-LHYLSEFTKELVK 630
>gi|325191332|emb|CCA26115.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 162/691 (23%), Positives = 298/691 (43%), Gaps = 97/691 (14%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP------AAKILAIGLSSRKNLCVNSR 120
P K+ +C+RT ++ + + E + + LG +++ + L+S+ + C+NSR
Sbjct: 220 PPKIFFCSRTHSQLAQAVEEFRKCPSSYFHFLGDYPELEFRSRLRSCILASKSHFCINSR 279
Query: 121 VLAAENRD---SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
A +N+ SVD C+ L +EN C F+ ++ + + P V+ +
Sbjct: 280 --AKQNKHDNRSVDEKCQN--------LLSEN----KCSFYRLGRESNAQSPKIPHVWDI 325
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
++ + K++ C Y+ A + + FA++V Y YL+ P + + + K+++VV DEAH
Sbjct: 326 EEFISLSKRKKECAYYSALNTLPFADIVFCPYSYLIHPSIRSAVKISV-KDAIVVLDEAH 384
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAG-RLRAEYNRLVEGLALRG 296
N++++C + S V + TL ++ +++ ++ R +A + ++ + R ++ ++
Sbjct: 385 NVEDICRSSASFEVTKDTLSICIQSFTQVIEKANRPQAYPSLLKILTGFERWMDMVSTTV 444
Query: 297 NL--------PNAWLSNPALPSDILKEAVPGN------IRRAEHFLHVLRR-LVQYLRGR 341
L N W + A+ + E N ++ A + +H R L+Q +G
Sbjct: 445 KLQTTGFEEESNVWSGSDAIA--MFDEYAGMNQDNFSSLQVASNLVHEHERILMQEEKG- 501
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF 401
T N EK G + + I KT+ +++ D F ++ DF
Sbjct: 502 --TGNDEKSGSIQPNSPEVLLRPIALKTV-------ETILCVASFMFRDNFKYLD---DF 549
Query: 402 ATLV-GTYTRGFSIIIEPFDERMPHIPDPV----------LQLSCHDASLAVKPVFDRFQ 450
L + + +S I P D+ + L + C ++ + +
Sbjct: 550 KLLFFKSRAQKWSKDI-PSDDHLAMKDKKATTNTAGWQFRLAIWCLSGAVVFADIAKDAR 608
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM-------VLTRGSDQLPVS 503
SV++TSGTL+P+D Y L F + L + + M + +G Q+ +S
Sbjct: 609 SVILTSGTLTPMDSYAGELGL------DFGVRLEANHVVDMRTQVFIRAIMQGPGQVDLS 662
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
T + ++ G LL + V ++P GI+ F SY + ++ W +G+ +I K
Sbjct: 663 TTYQNQNTFRYQDALGNLLKQYVELIPGGILMFLPSYRLLGILVNRWKQTGVWYQINTAK 722
Query: 564 LVFIETQ--------DVVETTLALDNYRKACDCG----RGAVFFSVARGKVAEGIDFDRH 611
VF E + D+ + LA+ + D RGA+F +V RGKV+EGIDF
Sbjct: 723 KVFTEARSAGINFDADLEQYKLAVQKEDSSSDAQSPKQRGAIFLAVYRGKVSEGIDFSDG 782
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----DFLTFDALRQAAQCVGRVI 666
R VI G+PF + + EY +I+ + A R Q VGR I
Sbjct: 783 NARAVIAVGIPFPNLKQLQVSLKREYQDRKCKIERKLLNGHQWYQLQAFRALNQAVGRCI 842
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
R + DYG + D R+ W+ S
Sbjct: 843 RHRNDYGAIFLVDSRHRMQAYAPNFSKWMRS 873
>gi|429329870|gb|AFZ81629.1| DNA repair helicase, putative [Babesia equi]
Length = 956
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 194/847 (22%), Positives = 342/847 (40%), Gaps = 190/847 (22%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
+E V V FPY Y Q YM + +A+ + LLE PTGTGKT++L+
Sbjct: 11 IEGVEVRFPYP-PYQSQKLYMEAVIKAVKNGKNALLESPTGTGKTLSLICSSLACLLNNK 69
Query: 55 -------------------LITSYVLSK------------------PENPVKLIYCTRTV 77
+ S +L+K N + ++Y +RT
Sbjct: 70 FNNKGGFNAPTDNANNNQYTLESSLLNKMSDLRKTPVSDQKKTKLRNRNRIHIVYASRTH 129
Query: 78 HEMEKTLAEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK 136
++ + L E+ K L+ + G I A+ L SR LC+N + ++++A C+
Sbjct: 130 TQLRQVLKEVRKSLYTNEFNSKG----IKAVLLGSRDQLCINP-ARGNSSGEALNALCKN 184
Query: 137 ----RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPY 192
R + L N E F+E + ++D+ + GK + CPY
Sbjct: 185 LVQNRKCIYHSGLKMGKVN-EDMSFYE--------------LLDIEDMVSLGKSKKCCPY 229
Query: 193 FLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVR 252
+ + + A++ + Y YLL + + +Q ++++ DEAHNI+++ A S +R
Sbjct: 230 YAVKDAHESADLTLLPYNYLLSTTIREAMELNLQG-AILIIDEAHNIESIAENAASFYIR 288
Query: 253 RQTLE---GATRNLSRINQE-IERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSN--- 305
+ + A R + ++ + K D L + + LA+ + +LSN
Sbjct: 289 QVDIARYMAALRRFASFHKTYLNSIKNEDKEPLHSINTSALSRLAISLKNIDEFLSNVVL 348
Query: 306 ---------PALPSDILKEAVPGNIRRAE----------HFLHVL--------------R 332
P D+ + I+R H L VL R
Sbjct: 349 DEYNDAIDSPTRHDDVGRCWFVKEIKRKHIIYNAQDIVTHMLDVLGFNELRLLKVDEIIR 408
Query: 333 RLVQYL-RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL------E 385
+ + L G L+T ++ SF++ D KTL+ + L SL + L E
Sbjct: 409 QSISMLSNGLLQTNQLDD----SFISHY------DNKTLQEDLQSLESLRIMLLRIFAKE 458
Query: 386 ITDTDEFLHIQTICDFA-------TLVGTYTRGFSIIIE-------PFDERMPHIPDPVL 431
+ ++ H+ D T T G++ I+ + HI +L
Sbjct: 459 LLTCPQYFHVFITNDEKFDNSKRLTTTQPATSGWNSKIKNRQTIQYSNTKNDTHILPKIL 518
Query: 432 QLSCHDASLAVKPVFDRFQ-----SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL-TR 485
C L P F R + S+++TSGTL+P+ + + + + + F++ L R
Sbjct: 519 NFEC----LQAVPTFLRIKDEGVRSIILTSGTLAPLYVLEKQIGGNKL---PFEIKLQNR 571
Query: 486 DCICP------MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
I P +V D +S+ ++ R+ + G+ L+ + VP G++ FF S
Sbjct: 572 HVIEPSRVWAGIVTGDKDDPHSLSSVYNTRATTPYVKALGESLLSFIKCVPSGVLVFFGS 631
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIET-----------QDVVE-------TTLALDN 581
Y M++ ++ W G+ ++ K +FIE+ Q++ + T +
Sbjct: 632 YPAMNQTVSMWKQLGLYSKMEMFKSIFIESRSSELNSAENYQELSKLDSSYGLTQAQIME 691
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR-- 639
Y+ G+G++F + RGK+AEGIDF Y R V + G+P+ +++YLR
Sbjct: 692 YKSHITSGKGSIFIGICRGKIAEGIDFSDDYCRGVFVCGIPYPNRYDDNTALKMDYLRRN 751
Query: 640 ---DTFQIKEG---DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPG 693
+T K D+ T A+R Q +GR IR DYG ++ AD RY + +
Sbjct: 752 GNCETESAKNDLAYDWYTTQAIRAINQAIGRSIRHINDYGAVLLADYRYQLSPIKQNISE 811
Query: 694 WILSHLR 700
W+ + L+
Sbjct: 812 WVANRLK 818
>gi|357130391|ref|XP_003566832.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Brachypodium distachyon]
Length = 872
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 274/636 (43%), Gaps = 93/636 (14%)
Query: 109 LSSRKNLCVN---SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
L SR+ +C++ S++ + C+KR L N NI T E+ N +
Sbjct: 4 LGSREQMCIHDEVSKLRGKAQNNGCHYLCKKR-------LCCHN-NIVT-EYMRNNSELG 54
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
S + ++DL G+ +G CPY+++R + + +++ Y YL+DP ++
Sbjct: 55 SEP------FDIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLTGIP 108
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY 285
+V++FDEAHN++++C +A S + L AE
Sbjct: 109 WDNAVLIFDEAHNLESICADAASFDLLPHNLTSCI----------------------AEA 146
Query: 286 NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETE 345
++ + + ++ N+ +D K+ P N + L L + V L +E++
Sbjct: 147 QECIQLCSFKRSIENS--------AD--KQFDPENYAILKALLMALEKKVSELV--IESK 194
Query: 346 NVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE----------FLHI 395
+ P S++ + I +T + E + S L LE ++ E +
Sbjct: 195 ELGYTKPGSYIHEFLSELNITSETSKKLIETIDSASLLLEEGNSGETKAGVKAKATVSRL 254
Query: 396 QTICDFATLVGTYTRGFSIIIEPF--DERMPHIPDPV---------LQLSCHDASLAVKP 444
+TI D ++ R F +E D + L C + LA++
Sbjct: 255 ETIRDMLDIIFRGGRQDHAKYYRFHVNESRQASGDSLQLFGKATRTLSWWCFNPGLAMEE 314
Query: 445 VFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
+S+++TSGTLSP+D LN V ++ D I V+ G ++
Sbjct: 315 FLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISPDQIWVGVVPVGPSGHSLN 374
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW---------NDSG 554
+ + R + G ++V IVPDG++ FF SYS MD+ I W +++
Sbjct: 375 SSYRTRETIKYKQELGLVIVNFARIVPDGLLVFFPSYSMMDKCIDFWKNRNHEHSVDENT 434
Query: 555 ILKEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSVARGKVAEGIDFDRHY 612
I + + +HK IE + A+++Y GA+FF+V RGKV+EG+DF
Sbjct: 435 IWQRMCKHKQPVIEPRQSSNFPDAIEDYAAKLRDSSTSGAIFFAVCRGKVSEGLDFADRA 494
Query: 613 GRLVIMFGVPFQYTLSKILLARLEYL--------RDTFQIKEGDFLTFDALRQAAQCVGR 664
GR VI+ G+PF + + +YL ++ + ++ A R Q VGR
Sbjct: 495 GRAVIVTGMPFSTPTDPKVRLKRDYLDKQATPSNKNPKGLTGEEWYVQQAARAVNQAVGR 554
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
VIR + DYG +I+ D+R+ + +S++ W+ +++
Sbjct: 555 VIRHRHDYGAIIYCDERFVWPNYQSQMSYWLKPYIK 590
>gi|452822429|gb|EME29448.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 788
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 165/647 (25%), Positives = 282/647 (43%), Gaps = 77/647 (11%)
Query: 69 KLIYCTRTVHEMEKTLAELK-LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
++ YC+RT ++ + E+K + N Q P +L LSSRKNLC+N +V + N
Sbjct: 171 RIYYCSRTHSQLLQFQEEVKRTIANMQWSEKVPRPSVLI--LSSRKNLCINEKVSSLSNA 228
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQ 187
+ ++ C + T+ E + C ++ + L + +++L GK++
Sbjct: 229 NLINERCMELTS-------KEPGSPGCCPYYHLEGQRILRDHLSSEIVDIEELVNLGKER 281
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEAL 247
CPY+ + ++ + ++ YQ LL + + +V+FDEAH++ ++AL
Sbjct: 282 RACPYYGMKRAIKSSQFILLPYQSLLHKPTRESLRLPLHSNCIVIFDEAHHV----VDAL 337
Query: 248 SVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPA 307
+ + GA N +I + K R ++ R + N ++
Sbjct: 338 N------DMYGAETNTQQIQSCLFGLK------------RYIDCYETRLSSLNLFM---- 375
Query: 308 LPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF-VASITAHAGID 366
F L LVQ+ L+ ++ E F V GID
Sbjct: 376 ----------------LRQFHSFLESLVQFSSLHLKIPPIDGETQNVFTVEDFVTRLGID 419
Query: 367 QKTLRFCYERLHSLMLTLEI------------TDTDEFLHIQTICDFA-TLVGTYTRGFS 413
+ E L S L L++ TD I + F TL Y++ S
Sbjct: 420 NLNIFKLNEFLESKCLHLKLIGLLKSRILSDSNGTDPCQGIHAVFHFVQTLKQPYSK--S 477
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFH 472
II F + I L H A+ + + +SVV GTL P+ D+ RLL
Sbjct: 478 RIIVKFRK---DIGCTFKMLVLHAAN-NLTEIISLVRSVVFVGGTLEPLRDIKLRLLGTF 533
Query: 473 P---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
+V SF + I P++++RG ++P+ + R + G++L+ + +V
Sbjct: 534 EDSHIVHCSFDHVIPDSHILPIIVSRGPTRVPLEFTYATRESEILIHELGRMLLNICRVV 593
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG 589
P G+V FF SYSY + I K +++ K +F E Q+ +E LDNY+KA
Sbjct: 594 PGGVVVFFSSYSYCSYALNYLQQKDIWKLLLRQKAIFKEPQESLELNNVLDNYKKAVYEQ 653
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF-QIKEGD 648
+G + F+V GK++EGI+F GR +I+ G+PF LS L + Y+ F + +
Sbjct: 654 QGGILFAVIGGKLSEGINFQDDLGRCIIVVGMPFPNHLSIELQESINYITGMFPSVSSKE 713
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
L ++ Q +GR IR +DYG ++ D+R++R +KLP W+
Sbjct: 714 ILEDMCMKLVNQTIGRTIRHISDYGAVLLVDQRFARPAISNKLPKWL 760
>gi|297272722|ref|XP_002808171.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Macaca mulatta]
Length = 1151
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 197/809 (24%), Positives = 323/809 (39%), Gaps = 116/809 (14%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+ + V +YFPY YP Q + M + R L++K HCLLE PTG+GK++ALL ++ S
Sbjct: 8 YTIGGVKIYFPY-KAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQS 66
Query: 63 KPENPVKL---------IYCTRTVHEMEKTLAELK--LLHNYQ--------------TRH 97
E P + C T H + T ++ H++ T
Sbjct: 67 LSEKPADEGISGKTEVPLSCCCTCHSKDFTNNDMNQGTSHHFNYPSTPPSERKSTSLTCQ 126
Query: 98 LGPAAKILAIGLSSRKNLCV-----------NSRVLAAE----------------NRDS- 129
P LA LS++K + R+ E N D+
Sbjct: 127 DSPEKTTLAAKLSAKKQASIYRDENDDFQVEKKRIRPLETTQQIRKRHCFGTEVHNLDAK 186
Query: 130 VDAACRKRTASWVRALAAENPNI-ETCEFFENYEKAASAAVLPP-----GVYTLQDLRAF 183
VD+ + S + + +P ++C F+ K + L + +++L +
Sbjct: 187 VDSGKTVKLNSPSGKINSFSPRKGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSL 246
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
GK+ CPY+ AR ++Q A+++ Y YLLD ++ + + KE VV+ DEAHNI++
Sbjct: 247 GKKLKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNL-KEQVVILDEAHNIEDCA 305
Query: 244 IEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGRLRAEYNRLVEGLALRG------ 296
E+ S S+ L A L S +N I R D LRA L+ L
Sbjct: 306 RESASYSITEVQLRFARDELDSMVNNNIRR---KDHEPLRAVCYSLINWLEANSEYLVER 362
Query: 297 ---NLPNAWLSNPALPS----DILKEAVPGNIRRAEHFLHVLRR--LVQYLRGRLETENV 347
+ W N L + I P I + HF VL++ + + G+ E
Sbjct: 363 DYESACKIWSGNEMLLNLHKMGITTATFP--ILQG-HFSAVLQKEEKISPIYGKEEA--- 416
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
+E P+ I+A I L+ + L L D + IQ + +
Sbjct: 417 -REVPI-----ISASTQI---MLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQIDI 467
Query: 408 YTRGFSIIIEPFDERMPHIPDPV--LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
+ ++I P ++++ V L C + ++A + + Q++V+TSGTLSP+ +
Sbjct: 468 SDKN-GLLILPKNKKLSRQKTAVRVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSF 526
Query: 466 PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
L V + + + G + F G LL+ +
Sbjct: 527 SSELGVTFTVQLEANHVIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSV 586
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA--LDNYR 583
V GI+CF SY ++++ W +G+ + K V +E Q +T L Y
Sbjct: 587 CQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYY 646
Query: 584 KACDC---GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QYTLSKILLAR 634
A GA+ +V RGKV+EG+DF R VI G+PF Q L +
Sbjct: 647 DAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRRYNDH 706
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR--SKLP 692
LR ++ + A R Q +GR IR + D+G +I D R+ + R S L
Sbjct: 707 HSKLRGLLPGRQ--WYEIQAYRALNQALGRCIRHQNDWGALILVDDRFRNNPSRYISGLS 764
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRK 721
W+ ++ + + + AL EF +K
Sbjct: 765 KWVRQQIQH---HSTFESALESLAEFSKK 790
>gi|345563336|gb|EGX46339.1| hypothetical protein AOL_s00110g163 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 169/712 (23%), Positives = 291/712 (40%), Gaps = 127/712 (17%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLH---NYQ-----TRHLGPAAKILAIGLSSRKNLCV 117
+ +K+ YC+RT ++ + AEL+ +H Y+ P + + L SRK LC+
Sbjct: 221 DEIKIFYCSRTHSQLSQFTAELRRVHLPPTYEDDLTEESEEKPEEVVKHLSLGSRKLLCI 280
Query: 118 NSRVLAAENRDSVDA-ACRKRTASWVRALAAEN------PNIETCEFFENYEKAASAAVL 170
N +V N S A R ++ +AEN P + N E A
Sbjct: 281 NDKV----NTPSASANTVNDRCLDLQQSKSAENKCPFLLPKADNQRNVLNREFRDLALA- 335
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
+ ++DLR G++ C Y+ +R ++ ++ Y LL K + K K +
Sbjct: 336 --DIKDIEDLRGVGEKLKICGYYASREAIKPTEIITLPYPLLLQ-KSSREALKISVKNHI 392
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNR 287
++ DEAHN+ + SVS+ L NL+ I +F G R A+ +R
Sbjct: 393 IIIDEAHNLMDAVSNIHSVSISLSQLTKCADNLAAY---ILKFGKKLKGGNRVYVAQCHR 449
Query: 288 LVEGLALRGNLPNAWLSN--------------PALPSDILKEAVPGNIRRAEHFLHVLR- 332
LV+ L WL + P +P +K+ ++ + +H+L+
Sbjct: 450 LVKTL-------KTWLEDKFSIQPNAIDPKVPPKIPDGTVKQGDLLQLKGIDQ-IHILKL 501
Query: 333 -------RLVQYLRG--------RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERL 377
+L + + G +L + +++ P + + G+ +
Sbjct: 502 GKYLEESKLARKVEGYTMFQENEKLADQAKKQKIPAAKARKVATSGGLP------VLSHV 555
Query: 378 HSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHD 437
++ +LTL + + + I D GF ++ D
Sbjct: 556 YAFLLTLTNPEKEGKVFYGPIDDAGAKDFRAAVGFRYML-------------------LD 596
Query: 438 ASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS-----LTRDCICPMV 492
+ K + + ++VV+ GT+ P+ Y L F + S +M + +D + M
Sbjct: 597 PTHHFKDLVEDARAVVLAGGTMEPMSDYVNHL-FPYLPSERLRMVSCGHVIPQDNMLAMT 655
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
+ G F+ R+ P + GK + + ++P G+V FF SY+Y++ ++ W +
Sbjct: 656 VPMGVTNQAFEFTFEKRNGPKLITELGKTIFNLCKVIPHGVVVFFPSYAYLETVVKVWEE 715
Query: 553 SG------ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
G I + + K VF E + L +Y KA D G+GA+ SV GK++EGI
Sbjct: 716 KGPEGTASIYENLQSRKAVFREAKGSSSVEDILRDYAKAVDEGKGALLLSVVGGKMSEGI 775
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL------RDTFQIKEGDFLTFDALRQAA- 659
+F + GR VIM G+PF S A+LE++ R + EG L L+Q A
Sbjct: 776 NFSDNLGRGVIMVGLPFPNIHSAEWKAKLEFVEQSMITRSESAVAEGTSLDATKLQQEAK 835
Query: 660 ----------------QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q +GR IR + DY +++ DKR+SR + KLP WI
Sbjct: 836 AAAQGYYENACMRAVNQSIGRAIRHRNDYAVILLLDKRFSRDNIWGKLPKWI 887
>gi|321248407|ref|XP_003191119.1| CHL1 helicase [Cryptococcus gattii WM276]
gi|317457586|gb|ADV19332.1| CHL1 helicase, putative [Cryptococcus gattii WM276]
Length = 854
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 171/691 (24%), Positives = 291/691 (42%), Gaps = 115/691 (16%)
Query: 72 YCTRTVHEMEKTLAEL--KLLHNYQTRHLGPAAKILAIGLS-----SRKNLCVNSRVLAA 124
Y +RT ++ + +EL NY P+A+ + G+S SRK LC+N +V
Sbjct: 192 YTSRTHTQLRQLTSELLKTSFANYDPMPESPSAEAPSHGVSLVPLGSRKQLCINEKV--- 248
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAA---------VLPPGVY 175
RALA + + E + +K A ++ V
Sbjct: 249 ------------------RALARKGGDERMNEACLDMQKPAKTDEIMMLDARDMILTSVK 290
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
++D+ A GK+ CPY+ R V+ + +V Y LL + + K VVV DE
Sbjct: 291 DIEDIVAVGKKSCVCPYYATRKAVKQSQIVTLPYNLLLQKNAREALGINL-KNQVVVIDE 349
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYN-------RL 288
AHN+ + + S ++ L A LS++ Q ++RFK+ RL+++++ L
Sbjct: 350 AHNLIDTILSIYSTTLTSVNLANA---LSQLRQYLQRFKS----RLKSKHSLWIQQVLSL 402
Query: 289 VEGL-------------ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLV 335
++GL +G+ P + ++ L + G + LV
Sbjct: 403 LQGLIRVCDKFIQDSKSQAKGDKPVGMPKTEVIDANTLMRRIGGGSDQVNPV-----ELV 457
Query: 336 QYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHI 395
YL+ + F + A + + H+ + I ++ FL
Sbjct: 458 AYLKESKLARKIS-----GFSEHVVEQASLKNAKIPRSATARHASITAFHIVES--FL-- 508
Query: 396 QTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVIT 455
+LV G I+ D+ P V++ + S K V + +SVV+
Sbjct: 509 ------LSLVDAKDDGR--ILLSIDDLNKSEPVVVIKYILLNPSERFKEVIEDARSVVLA 560
Query: 456 SGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMR 509
GT+ PI + L P + + ++L+ + P V++ G + KF R
Sbjct: 561 GGTMEPITDF--LQQLFPSIPKDRLLTLSCSHVIPKENLLTQVVSVGPRKSEFEFKFGNR 618
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK-LVFIE 568
+D + + G +L ++ +VPDG+V F SY+++D++ A W SG+L+ + + K +F E
Sbjct: 619 NDEALLTDLGAVLQAIIGVVPDGVVVFLPSYAFLDKVRAFWMKSGLLQRLGERKQQLFYE 678
Query: 569 TQDV--VET-----TLALDNYRKACDCGR-----GAVFFSVARGKVAEG----IDFDRHY 612
Q VET LA+ + G+ GA+ F+V GK++EG I+F +
Sbjct: 679 PQTSGDVETILRDYALAITSCHATSAAGQKSRKTGALMFAVVGGKLSEGASCCINFSDNL 738
Query: 613 GRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---DFLTFDALRQAAQCVGRVIRSK 669
GR VIM G+PF S L R++Y+ +G + +R Q +GR IR
Sbjct: 739 GRCVIMVGLPFANVGSVELRERMQYVETIPGAGQGASREMYENLCMRAVNQSIGRAIRHA 798
Query: 670 ADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
DY ++ DKRY+ R+KLP WI +R
Sbjct: 799 NDYATILLVDKRYANPRIRNKLPKWIGEDVR 829
>gi|146414083|ref|XP_001483012.1| hypothetical protein PGUG_04967 [Meyerozyma guilliermondii ATCC
6260]
Length = 825
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 168/693 (24%), Positives = 295/693 (42%), Gaps = 112/693 (16%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
PV + + +RT ++ + +L + +++ A +I + LSSRK LC++ +V + +
Sbjct: 197 PVTIFFSSRTHSQLSQFAHQLSITL-FESSLGEIAERIKFMPLSSRKQLCIHPKVSSLSS 255
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP-------PGVYTLQD 179
+V+ AC + + + + CEF S ++ + +++
Sbjct: 256 VSAVNDAC----------VELQQKSDKRCEFMPRVNNPESDQLVQRFADYSFAVIKDIEE 305
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G CPY+ +R ++ + ++ YQ LL + + K+S+V+ DEAHN+
Sbjct: 306 LHELGADLKVCPYYASRRNIENSEIIALPYQMLLQQATRKSLGLSI-KDSIVIIDEAHNL 364
Query: 240 DNVCIEALSVSVRRQTLEGATRNLS-RINQEIERFKATDAGRLRAEYNRLVE-GLALRGN 297
+V SVS+ R+ L +L N+ +R + + R +L++ L +
Sbjct: 365 LDVISSINSVSITRKELSSVIASLKLYYNKFTKRLNSGN----RIHLMKLIKLCLLVETY 420
Query: 298 LPNAWLSNPALP-SDIL-KEAVPG------NIRRAEHFL---HVLRRLVQYL-RGRLETE 345
+ N + N +P SD+L E G NI R E +L + ++ Y+ + R E++
Sbjct: 421 IKNCEIQNKCVPGSDVLIDELFQGSTGDLLNIHRIEKYLDKSKIAYKIQTYIEQSREESD 480
Query: 346 NVEKEGPVSFVASITAHAGID-QKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATL 404
+ P+ F + + ++ K RF +++++
Sbjct: 481 EKQASSPLLFKVTAFLKSLVNPSKEGRFFWDKIND------------------------- 515
Query: 405 VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
D ++ D S + V + + V++ GT+ P++
Sbjct: 516 -----------------------DTEIKYLLLDPSEMFRDVVESARCVLLCGGTMEPVED 552
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICPM----VLTRGSDQLPVSTKFDM----RSDPGVAR 516
Y R L P V T I P VLT L +T FD R+DP + R
Sbjct: 553 YYRYL--FPYVPGEKIKKFTCGHIVPQENIEVLTVS---LRKTTVFDFLYHKRNDPSMLR 607
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
L ++ VP+GI+ F SY Y++++I TW G L +I K VF+E D
Sbjct: 608 ELALSLQDICERVPNGIIVFAPSYKYLNQLILTWRKDGNLAKISTLKQVFLELSDSTSIE 667
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
L +Y A G GA+ FSV GK++EG++F R VIM G+P+ S L+A+ +
Sbjct: 668 SILRDYGAAAR-GSGAILFSVVGGKMSEGVNFSDELARAVIMLGLPYPNAFSGELIAKRK 726
Query: 637 YLRDTFQIKEG----------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
++ +T +K G ++ +R Q VGR IR DY +++ D RY+
Sbjct: 727 FIEETTLLKGGTQAMAKKNSREYYENICMRAVNQSVGRSIRHANDYSVIVLFDTRYNSSH 786
Query: 687 KRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 719
+ KL GW+ +R S DM L +F
Sbjct: 787 IQLKLSGWMRLSIRPER--ESFDMTLERIADFF 817
>gi|254583620|ref|XP_002497378.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
gi|238940271|emb|CAR28445.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
Length = 803
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 157/665 (23%), Positives = 279/665 (41%), Gaps = 104/665 (15%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKL---------LHNYQTRHLGPAAKILAIGLSSRKNLC 116
NP+K+ + +RT ++ + ++L+L + N +HL L SRK LC
Sbjct: 190 NPIKVYFASRTHSQLRQFASQLRLPIFPPSLPNVKNESIKHLP---------LGSRKQLC 240
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP---PG 173
+N +V ++ D+++ AC++ L N C+F +N
Sbjct: 241 INPQVSRLKSTDAINDACKE--------LQQNGKN--GCKFKQNINNQLEQEFRDRSFTS 290
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++ ++DL A G+ CPY+ +R + A ++ YQ+LL + ++ K SVVV
Sbjct: 291 IHDIEDLAALGQSLDICPYYASRDSLTSAEIITLPYQFLLFQSTRESLGLDL-KNSVVVI 349
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
DEAHN+ + S + Q L+ L+ + +FK+ R +L++ +
Sbjct: 350 DEAHNLIDTVNAIHSSEISLQDLQSVKTGLTNY---LSKFKSRLGPGNRVNLMKLIKLI- 405
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
D+L N ++ + ++ L G +T N+ K
Sbjct: 406 -----------------DVLIIFTRQNYKKPGQVIDP----IEILSGNADTLNIHKINKY 444
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLE----ITDTDEFLHIQTICDFATLVGTYT 409
++ I+ ++ S M ++E I + + L + I F T + T
Sbjct: 445 IKISKISY--------------KIQSYMQSVEKDQGINNPGQPLLFK-IASFITCLTYPT 489
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL 469
+ F E+ P I +LQ + V + + V++ GT+ P+ L
Sbjct: 490 QEGKF----FFEKGPSIKYMLLQ-----PDKCFQSVLEDSRCVILAGGTMQPVS--DVLE 538
Query: 470 NFHPVVSRSFKMSLTRDCICP--MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
N P VS + ++ + D + P + T + + F+ R P V R G+ +++
Sbjct: 539 NLFPTVSNNQLVNFSCDHVIPDDNLGTYVLQEPQIELTFEKREQPQVLRQMGEFYLQLSK 598
Query: 528 IVP--DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA 585
VP GIV FF SY Y+ +I W +G+ ++ + + V ET+ + L Y +A
Sbjct: 599 AVPLTGGIVGFFPSYQYLQFVIDHWKKTGLWSQLTKLRKVNYETKSGED---PLPEYTEA 655
Query: 586 CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK 645
D G GA+ F+V G+++EGI+F + R ++M G+PF S ++ + +L + K
Sbjct: 656 VDKGEGAMLFAVVGGRLSEGINFQDNLCRAIVMTGLPFPNVFSGEMMVKRSHLENKILQK 715
Query: 646 EGD----------FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
G F L+ Q VGR IR DY + DKRY + KL W+
Sbjct: 716 GGTRQDAMSATKLFFETICLKAVNQSVGRAIRHANDYANIYLLDKRYGNPHTQEKLSHWV 775
Query: 696 LSHLR 700
L+
Sbjct: 776 SKRLQ 780
>gi|430812749|emb|CCJ29870.1| unnamed protein product [Pneumocystis jirovecii]
Length = 850
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 153/678 (22%), Positives = 286/678 (42%), Gaps = 94/678 (13%)
Query: 64 PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA 123
PE +K+IY +RT ++ + + EL+ + T + I L+SRKNLC+N V
Sbjct: 191 PE-ELKIIYASRTHSQLTQFINELRRVSFPSTFQDNTVQPVRHIALASRKNLCINPNVSK 249
Query: 124 AENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
N + ++ C + T R + F ++ A + ++D
Sbjct: 250 LSNINLINEKCIELQKHNTIPEGRCRYLPKDDKTKIHNFRDHALA--------NIRDIED 301
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G++ CPY+ +R ++ A ++ Y LL ++ + K ++V+ DEAHN+
Sbjct: 302 LVILGQKLDICPYYSSRTALKLAEIITLPYPLLLQASARETLNLSL-KNNIVIIDEAHNL 360
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP 299
+ S ++ T + +++IN + +F G+ ++++ L N+
Sbjct: 361 IDTITSIYSSTI---TFSQVSLAMNQINIYLSKFNKKLKGKNLVYIKQIIK---LLKNIS 414
Query: 300 NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI 359
N + DI + ++E + G + N+ K +
Sbjct: 415 NFMECKNNIIGDI-------QVEQSEILFY----------GGGDQVNIYK------LEKY 451
Query: 360 TAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFL------HIQTICDFATLVGTYTRG-- 411
++G+ +K + ++ +L T T+ + L HIQT L +T G
Sbjct: 452 MKNSGLARKVDEYFEKKSKNLDQTKTNTEKNIILGLPILSHIQTF--LLNLTNPFTEGKI 509
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----LYP 466
F IE D L+ + K + + ++V++ GT+ P+D L+P
Sbjct: 510 FFGHIEKAQINGKTNTDCYLKYLLLNPCYQFKEIVNEARAVILAGGTMEPMDDFIYQLFP 569
Query: 467 RLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMV 526
L + S ++ D +C ++++ G + ++ R++ + G L+ +
Sbjct: 570 YLQK-EKIHRFSCGHIISPDHLCAIIVSTGPTRKEFIFNYEKRNNDDILNELGSALINLC 628
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWN-----DSGILKEIMQHKLVFIETQDVVETTLALDN 581
++PDG++CFF SY Y++EI+ W+ I + + Q K + +++ L N
Sbjct: 629 RVIPDGVICFFPSYDYLEEIVKKWHIKQGTKLSIWERLEQKKKFSTDIENM------LQN 682
Query: 582 YRKACDCG-----RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
Y + GA+ SV GK++EGI+F GR VI+ G+PF S A+LE
Sbjct: 683 YSNTINSSNTSHYNGALLLSVIGGKLSEGINFSDKLGRGVIIVGLPFPNIQSAEWKAKLE 742
Query: 637 YLRDTFQ--------IKEG-----------DFLTFDALRQAAQCVGRVIRSKADYGMMIF 677
++ + F+ I++G ++ +R Q +GR IR + DY +IF
Sbjct: 743 FVENNFRQNFLNNPSIQKGSIENLIKSIRKEYYENTCMRSVNQSIGRAIRHRNDYAAIIF 802
Query: 678 ADKRYSRHDKRSKLPGWI 695
DKRY R K+ WI
Sbjct: 803 LDKRYESEHIRDKISKWI 820
>gi|322694417|gb|EFY86247.1| DEAD-2 domain-containing protein [Metarhizium acridum CQMa 102]
Length = 891
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 163/700 (23%), Positives = 286/700 (40%), Gaps = 113/700 (16%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK-------LLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
E +K+ Y +RT ++ + + EL+ L + + + LSSR+ LC+
Sbjct: 207 EEEIKIYYTSRTHSQLSQFITELRRPKFPSSLPTSLAEEKSSVQETVKLLPLSSRQRLCI 266
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
N V + +++ C + S + P E + +A A V +
Sbjct: 267 NPSVARLGSVQAINDRCAELQQSKSTKKCSYVPKEELLSQTHQFRDSALATV-----PDI 321
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL GK CPY+ +R + A ++ Y LL + +++ +VV+ DEAH
Sbjct: 322 EDLHQLGKSLAVCPYYASRSALPGAEIITLPYPLLLQRSAREALGIKLEG-NVVIIDEAH 380
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLS----RINQEIERFKATDAGRLRAEYNRLVEGLA 293
N+ + + ++ L+ L R ++++ + GR+ R+++GL
Sbjct: 381 NVMDAVANVHAAEIKLSDLQKGRGMLGVYVKRFGKKLKGVNRVNVGRV----GRVIDGLT 436
Query: 294 LRGNLPNAWLSNPAL--PSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
N + + +D+ + P I + F L+QY++ +E
Sbjct: 437 EWMNGAKGFKQQHGIVDANDLTR---PKGIDQINMF-----ELIQYIQESKLAYKIE--- 485
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
S+ A + + + + LH+L+ FL A L T G
Sbjct: 486 --SYAAHVESENSSGKPATKSSTPVLHTLV---------SFL--------AALTNPSTEG 526
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----LYP 466
+ + + D L + A + ++V++ GT+SP D L+P
Sbjct: 527 RIF----YQKTSGPVQDVQLSYLLLSPTHAFSSIVSSARAVILAGGTMSPFDDYKNHLFP 582
Query: 467 RLLNFHPVVSRSFKMSLTRD--CICPMVLTR-GSDQLPVSTKFDMRSDPGVARNYGKLLV 523
L + V + S + R+ C+C + TR G S + R D + + G ++
Sbjct: 583 ALADAK-VTTLSCGHVIPRENLCVCTLTGTRPGGSSFEFS--YQRRGDQEMVKELGLAIL 639
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWN---------DSGILKEIMQHKLVFIETQDVVE 574
+ S+VPDG+V FF SY Y++E++A W+ + I + K+VF ET+
Sbjct: 640 NICSLVPDGVVVFFPSYGYLEEVVAVWSRRALGDKNPQTTIWDRLQTRKMVFRETKGCSS 699
Query: 575 TTLALDNYRKAC--DCGR---------GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
+ L Y +A + GR GA+ SV GK++EGI+F GR V++ G+P+
Sbjct: 700 DEV-LQEYTQAILGNGGRTTGMVKGKGGALLLSVVGGKMSEGINFSDRLGRCVMVVGLPY 758
Query: 624 QYTLSKILLARLEY--------LRDTFQIKEG----------------DFLTFDALRQAA 659
S AR+EY L+D+ + DF +R
Sbjct: 759 PNIASPEWKARMEYIESTTLENLQDSVNVAGSKLTKDEAAARAKQAARDFYENACMRAVN 818
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
Q +GR IR K DY ++ AD+RY+ + KLPGWI S +
Sbjct: 819 QSIGRAIRHKGDYAAIVLADRRYATERIQGKLPGWIRSGM 858
>gi|395743927|ref|XP_002822926.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, partial
[Pongo abelii]
Length = 636
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 239/566 (42%), Gaps = 57/566 (10%)
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
V ++ L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+
Sbjct: 64 VKDIEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVII 122
Query: 234 DEAHNIDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
DEAHN+ + SV V Q + ++ L + + +R KA + L+ L + +
Sbjct: 123 DEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFV 182
Query: 293 A-LRGNL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE 343
A L GN+ PN LS +D L ++ NI + V R + + R
Sbjct: 183 AVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKL 238
Query: 344 TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------F 392
E+ G V AG Q + L M DE
Sbjct: 239 FGFTERYGAVLSSREQPKLAGFQQ-----FLQSLQPRMTEALAAPADESQASAPRPASPL 293
Query: 393 LHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSV 452
+HI+ A L G I+ R + L+ + ++ V ++V
Sbjct: 294 MHIEGF--LAALTAANQDGRVIL-----SRQGSLSQSTLKFLLLNPAVHFAQVVKECRAV 346
Query: 453 VITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
VI GT+ P+ D +LL VV S + D I P+V+ G P+ F
Sbjct: 347 VIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTF 406
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
R P + G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F
Sbjct: 407 QKRELPQMMDEAGRILCNLCGVVPGGVVCFFSSYEYLRQVHAHWEKGGLLGRLAARKKIF 466
Query: 567 IETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
E + + L Y + CG+ GA+ SV GK++EGI+F + GR V+M
Sbjct: 467 QEPKSAHQVEQVLVAYSRCIQACGQERGRVTGALLLSVVGGKMSEGINFSDNLGRCVVMV 526
Query: 620 GVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYG 673
G+PF S L ++ YL T Q G L + ++ Q +GR IR + D+
Sbjct: 527 GMPFPNIRSPELQEKIAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFA 586
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHL 699
++ D+RY+R +KLP WI +H+
Sbjct: 587 SIVLLDQRYARPPVLAKLPAWIQAHV 612
>gi|58264204|ref|XP_569258.1| CHL1 helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223908|gb|AAW41951.1| CHL1 helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 849
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 164/640 (25%), Positives = 276/640 (43%), Gaps = 89/640 (13%)
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFF 158
P+ + + L SRK LC+N +V RALA + E
Sbjct: 226 APSHGVSLVPLGSRKQLCINEKV---------------------RALARNGGDERMNEAC 264
Query: 159 ENYEKAASAA---------VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
+ +K+A A + V ++D+ GK+ CPY+ R V+ + +V Y
Sbjct: 265 LDMQKSAKADEITMLDARDTILASVKDIEDIVTMGKKSCVCPYYATRKAVKQSQIVTLPY 324
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
LL + ++ K VVV DEAHN+ + + ++ L A +S++ Q
Sbjct: 325 NLLLQKNSHEALGIKL-KNQVVVIDEAHNLIDTLLSIHCTTLTSTNLANA---VSQLQQY 380
Query: 270 IERFKATDAGRLRAEYNRLVEG-LALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFL 328
++RFK+ RL+ ++ ++ L+L L KE+ P + E L
Sbjct: 381 LQRFKS----RLKPIHSLWIQQILSLLQGLIRVCDKFFQDAKSQTKESKPVGKPKVE-VL 435
Query: 329 HVLRRLVQYLRGRLETENVE-----KEGPVS-----FVASITAHAGI-DQKTLRFCYERL 377
V + + G + +E KE ++ F + A + D KT R R
Sbjct: 436 DVNNLMGRIGGGSDQVNPIELLAYLKESRLARKISGFSEHVAEQAALKDAKTSRSATARH 495
Query: 378 HSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII-IEPFDERMPHIPDPVLQLSCH 436
S+ F ++++ +LV G I+ I+ D+ P + V++
Sbjct: 496 ASIAA---------FHNVESF--LLSLVDAKDDGRIILSIDDLDKSEPVV---VIKYVLL 541
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------ 490
+ S K V + +SV++ GT+ PI + L P + + +L+ + P
Sbjct: 542 NPSERFKEVVEEARSVILAGGTMEPITDF--LQQLFPSIPKDRLSTLSCSHVIPKENLLT 599
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
V++ G + KF R+D + + G +L + +VPDG+V F SY+++D++ A W
Sbjct: 600 QVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQATIGVVPDGVVVFLPSYAFLDKVRAFW 659
Query: 551 NDSGILKEIMQHKLVFIETQDV--VET-----TLALDNYRKACDCGR-----GAVFFSVA 598
SG+L+ + + K +F E Q VET LA+ + G+ GA+ F+V
Sbjct: 660 TKSGLLQRLGERKQLFYEPQTSGDVETILRDYALAISSCYATSTSGQKSRKTGALMFAVV 719
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---DFLTFDAL 655
GK++EGI+F + GR VIM G+PF S L R+ Y+ +G + +
Sbjct: 720 GGKLSEGINFSDNLGRCVIMVGLPFANVSSVELQERMRYVETVPGAGQGASREMYENLCM 779
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R Q +GR IR DY ++ DKRY+ R+KLP WI
Sbjct: 780 RAVNQSIGRAIRHANDYATILLVDKRYATSRIRNKLPKWI 819
>gi|67525973|ref|XP_661048.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
gi|40743798|gb|EAA62984.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
Length = 994
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 183/716 (25%), Positives = 296/716 (41%), Gaps = 124/716 (17%)
Query: 44 TGTG---KTIALLSLITSYVLS-KPE----NPVKLIYCTRTVHEMEKTLAELKL------ 89
T TG T+ LL + Y KPE N +K+ YC+RT ++ + +EL+
Sbjct: 163 TATGLSSSTLELLERLRKYGSKIKPEEDDENDIKIFYCSRTHSQLMQFASELRRVTMPST 222
Query: 90 ----LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
L T +I I L SRKNLC+NSRV A N +++ C L
Sbjct: 223 LPESLRQGLTDEEEQGERIKHISLGSRKNLCINSRVAALGNPTAINERC----------L 272
Query: 146 AAENPNIET---CEFFENYEKAASAAVLP----PGVYTLQDLRAFGKQQGWCPYFLARHM 198
+ PN C + E A V ++DL GK+ G CPY+ +R
Sbjct: 273 ELQQPNTPAPLRCSYLPTEEDEAKTLSFRDHALATVKDIEDLGKLGKKLGLCPYYASR-- 330
Query: 199 VQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
VV +S + D I K VV+ DEAHN+ + SV+V TL
Sbjct: 331 ----GVVSHSERSARDALNLSI------KGHVVIIDEAHNLMDAISNIHSVTV---TLSQ 377
Query: 259 ATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGLA--LRGNLPNAWLSNPA-LPSDI 312
++ ++ +FK G+ R A+ RL+ +A L+ + N S + L SD+
Sbjct: 378 LRTSIFQLTTYARKFKTRLKGKNRNYIAQVIRLISSIADHLQSLIDNKQASEGSVLSSDL 437
Query: 313 LKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEK-EGPVSFVASITAHAGIDQKTLR 371
+ I +L +YL E++ K +G + F S A+A + K+
Sbjct: 438 MAGKGADQINPY--------KLCRYLN---ESKLARKVDGYIDFSQS-KANAQAEPKSTI 485
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVL 431
+ S +L L + L T T G D L
Sbjct: 486 PVLFHIQSFLLPL-----------MNLSSEGRLFFTKTPG----------------DIQL 518
Query: 432 QLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDC 487
D + + + + ++V++ GT+SP+ D L ++ P + + S+ + +
Sbjct: 519 HYMLLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTFSYGHVIPSEN 578
Query: 488 ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
+ L RG + R + + G+ ++ +PDGIV FF SY Y+ ++
Sbjct: 579 LTAHTLARGVTGCEFDFTYAGRDAEKMILDLGRTFTQLCRAIPDGIVAFFPSYEYLSRVL 638
Query: 548 ATW-------NDSGILKEIMQHKLVFIETQDVVETTLAL-DNYRKACDCGRGAVFFSVAR 599
W N + + + + K + E+++ TT L +NY + GRGA+ SV
Sbjct: 639 NIWKNAVVRENKQTLYETVEKEKQILYESRETELTTDDLLNNYANTINKGRGALLLSVVG 698
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL----------------RDTFQ 643
GK++EGI+F GR V++ G+PF S + A+++Y+ R + +
Sbjct: 699 GKLSEGINFSDKLGRGVLIVGLPFPNIRSPVWQAKIKYIEQKAYRNVGSGSEESRRLSAK 758
Query: 644 IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
DF +R QC+GR IR + DY ++ DKRY + +KLPGWI L
Sbjct: 759 AAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVLIDKRYGKTSIEAKLPGWIKQSL 814
>gi|358054721|dbj|GAA99647.1| hypothetical protein E5Q_06350 [Mixia osmundae IAM 14324]
Length = 830
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 161/668 (24%), Positives = 292/668 (43%), Gaps = 93/668 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA--E 125
K+ Y +RT ++ + + E++ T + P L SR +LC+N ++ A
Sbjct: 199 TKVYYASRTHSQLAQFVQEIRKTSFADTTRIVP--------LGSRASLCINDKLKKACGG 250
Query: 126 NRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT----LQDLR 181
N ++++ C + AE + CEF + E+ + L+DL
Sbjct: 251 NTETLNERC-------LELQKAEKGS--RCEFLPSQEEEDKMIGFRDRILATTLDLEDLE 301
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
G+ CPY+ +R ++ A+VV Y LL + + K +V+ DEAHN+ +
Sbjct: 302 DLGRATHVCPYYGSRRAIRQAHVVTLPYNMLLQHAARESLGISL-KGHIVIIDEAHNLID 360
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAG-------RLRAEYNRL-VEGLA 293
+ +VS+ ++ A LS + ++RFK G +L A + RL +
Sbjct: 361 TVLSINTVSIASTSISNA---LSGVQLYLQRFKTRLKGSNTVYLKQLLAIFRRLEAYCIT 417
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPV 353
+ NA + L E + G+I + + L +L Y++ T + + +
Sbjct: 418 WSESRQNAKAIEELMLPKALMEDLQGSIDQVD-----LHKLAAYMK----TSKIAHK--I 466
Query: 354 SFVASITA--HAGIDQKT------LRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLV 405
S A++ A A QK L ++ S +L L D + + D + +
Sbjct: 467 SGYANMQAEKQARAQQKPNKHKVLLVNAVYQIQSFLLALTNPSRDGRIIVSRAADSSNVS 526
Query: 406 GTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
Y +++ P D + + + D +SV++ GT+SP+ +
Sbjct: 527 LRY-----LLLNPAD--------------------SFRSIVDDARSVILAGGTMSPLSDF 561
Query: 466 PRLLNFHPVVSRSFKMSLT------RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
L F + + M+L+ R I V+ G + ++ R + + ++ G
Sbjct: 562 DNQL-FGHLAADQKPMALSCGHVVPRQNISVSVIRSGPTKQDFRFTYENRDNLAMLQDLG 620
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
+ + + P GIVCF SY+++D++ A W SG+++ I ++KL+F+E + E L
Sbjct: 621 SAIATLARVCPAGIVCFVPSYAFLDKLQAVWKSSGMIERIRKNKLIFMEPKTAGEVDAVL 680
Query: 580 DNYRKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
Y A G +GA+ F+V K++EGI+F R VI+ G+P+ S L R+ +L
Sbjct: 681 KGYSTANSSGNKGAILFAVVGAKLSEGINFADDMARAVIIVGIPYPNAASTELKERMHHL 740
Query: 639 R-DTFQIKE----GDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
++ + KE GD L + A R Q +GR IR D+ ++ D RY+ ++KLP
Sbjct: 741 SAESKKRKEITDGGDQLYSNLAFRAVNQSIGRAIRHANDWASILLIDTRYATPALQAKLP 800
Query: 693 GWILSHLR 700
WI S ++
Sbjct: 801 QWIASEVQ 808
>gi|259485564|tpe|CBF82692.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_3G05590)
[Aspergillus nidulans FGSC A4]
Length = 841
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 183/716 (25%), Positives = 296/716 (41%), Gaps = 124/716 (17%)
Query: 44 TGTG---KTIALLSLITSYVLS-KPE----NPVKLIYCTRTVHEMEKTLAELKL------ 89
T TG T+ LL + Y KPE N +K+ YC+RT ++ + +EL+
Sbjct: 163 TATGLSSSTLELLERLRKYGSKIKPEEDDENDIKIFYCSRTHSQLMQFASELRRVTMPST 222
Query: 90 ----LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
L T +I I L SRKNLC+NSRV A N +++ C L
Sbjct: 223 LPESLRQGLTDEEEQGERIKHISLGSRKNLCINSRVAALGNPTAINERC----------L 272
Query: 146 AAENPNIET---CEFFENYEKAASAAVLP----PGVYTLQDLRAFGKQQGWCPYFLARHM 198
+ PN C + E A V ++DL GK+ G CPY+ +R
Sbjct: 273 ELQQPNTPAPLRCSYLPTEEDEAKTLSFRDHALATVKDIEDLGKLGKKLGLCPYYASR-- 330
Query: 199 VQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
VV +S + D I K VV+ DEAHN+ + SV+V TL
Sbjct: 331 ----GVVSHSERSARDALNLSI------KGHVVIIDEAHNLMDAISNIHSVTV---TLSQ 377
Query: 259 ATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGLA--LRGNLPNAWLSNPA-LPSDI 312
++ ++ +FK G+ R A+ RL+ +A L+ + N S + L SD+
Sbjct: 378 LRTSIFQLTTYARKFKTRLKGKNRNYIAQVIRLISSIADHLQSLIDNKQASEGSVLSSDL 437
Query: 313 LKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEK-EGPVSFVASITAHAGIDQKTLR 371
+ I +L +YL E++ K +G + F S A+A + K+
Sbjct: 438 MAGKGADQINPY--------KLCRYLN---ESKLARKVDGYIDFSQS-KANAQAEPKSTI 485
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVL 431
+ S +L L + L T T G D L
Sbjct: 486 PVLFHIQSFLLPL-----------MNLSSEGRLFFTKTPG----------------DIQL 518
Query: 432 QLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDC 487
D + + + + ++V++ GT+SP+ D L ++ P + + S+ + +
Sbjct: 519 HYMLLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTFSYGHVIPSEN 578
Query: 488 ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
+ L RG + R + + G+ ++ +PDGIV FF SY Y+ ++
Sbjct: 579 LTAHTLARGVTGCEFDFTYAGRDAEKMILDLGRTFTQLCRAIPDGIVAFFPSYEYLSRVL 638
Query: 548 ATW-------NDSGILKEIMQHKLVFIETQDVVETTLAL-DNYRKACDCGRGAVFFSVAR 599
W N + + + + K + E+++ TT L +NY + GRGA+ SV
Sbjct: 639 NIWKNAVVRENKQTLYETVEKEKQILYESRETELTTDDLLNNYANTINKGRGALLLSVVG 698
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL----------------RDTFQ 643
GK++EGI+F GR V++ G+PF S + A+++Y+ R + +
Sbjct: 699 GKLSEGINFSDKLGRGVLIVGLPFPNIRSPVWQAKIKYIEQKAYRNVGSGSEESRRLSAK 758
Query: 644 IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
DF +R QC+GR IR + DY ++ DKRY + +KLPGWI L
Sbjct: 759 AAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVLIDKRYGKTSIEAKLPGWIKQSL 814
>gi|330930952|ref|XP_003303208.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
gi|311320914|gb|EFQ88691.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
Length = 865
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 164/680 (24%), Positives = 288/680 (42%), Gaps = 79/680 (11%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLH-----NYQTRHLGPAAKILA-----IGLSSRKNL 115
+ K+ +C+RT ++ + +EL + G AK L + L SRKNL
Sbjct: 198 DETKIFFCSRTHSQLTQFSSELGRVKMPPAIAPDDAENGGGAKSLVEDVKHLTLGSRKNL 257
Query: 116 CVNSRVLAAENRDSVDAACRK-RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV 174
C+NS+V + +++ C + + +S P E+ ++ A A +
Sbjct: 258 CINSKVNRLGSATAINEQCLELQQSSVAETRCPHMPTKESEPLINDFRDHALAKI----- 312
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL + GK+ G CPY+ +R ++ +V Y LL + + K+ +V+ D
Sbjct: 313 RDIEDLGSLGKKLGVCPYYASRPATKYCEIVTLPYPLLLQRSAREALGISL-KDHIVIID 371
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLAL 294
EAHN+ + SVSV TLE + +++ +++F+ G+ R + V L
Sbjct: 372 EAHNLMDAIAGIYSVSV---TLEQVQQARTQLTVYLQKFRNKLKGKNRVYVAQTVRILDS 428
Query: 295 RGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVS 354
P + SD L + V + +++ + L YL+ V+ G +
Sbjct: 429 IVGYLQTIHDKPGM-SDGLVDMVSIMSGKGVDQINIYK-LNTYLQESRLARKVD--GYTA 484
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
+V T + H++ + +H+Q +L+ T G
Sbjct: 485 YVEETTNEKAMTSTKQVGKKGPRHNVPV---------LMHVQAF--LLSLMNPSTEGRFF 533
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR-LLNFHP 473
D M L+ D + K + + ++V++ GT+SP+ Y + LL++
Sbjct: 534 YSREEDTGM------TLRYMLLDPTFHFKEIVEEARAVILAGGTMSPMSDYEQHLLSY-- 585
Query: 474 VVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+ S M+L+ + P + + R S + F+ R+ + G ++
Sbjct: 586 -LEPSKIMTLSCGHVIPPSNLLAVPVMRTSGGVEFDFTFENRNKEKTMIDLGTAILNFSQ 644
Query: 528 IVPDGIVCFFVSYSYMDEIIATW-------NDSGILKEIMQHKLVFIE------------ 568
+PDG+V FF SYSY+D +A W + + Q K VF+E
Sbjct: 645 HIPDGVVVFFPSYSYLDTCVAAWKRIKQSASKATFWDNFTQSKPVFLEQRSQQQASDQVP 704
Query: 569 -TQDV-VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
++DV V + L+ + A GRGA+ F+V G ++EGI+F GR V++ G+PF
Sbjct: 705 ASKDVAVASVLSTYSAAIASGNGRGALLFAVIGGTLSEGINFSDALGRGVVVVGLPFPNA 764
Query: 627 LSKILLARLEYLRDTFQIKEGD-------FLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
S A+++Y+ GD F +R QCVGR IR K DY ++ D
Sbjct: 765 QSAEWKAKMQYIAAKTAKNGGDGKAAARDFYENACMRAVNQCVGRAIRHKGDYAAILMLD 824
Query: 680 KRYSRHDKRSKLPGWILSHL 699
+RY+ + KLP WI + L
Sbjct: 825 RRYAGRRIQDKLPKWIRASL 844
>gi|443695361|gb|ELT96293.1| hypothetical protein CAPTEDRAFT_129050, partial [Capitella teleta]
Length = 169
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 99/139 (71%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
L+ + VYFPYD IYPEQY+YM ELKRALDA+GHC LEMP+GTGKT++LLSLI +Y+ +P
Sbjct: 31 LDGLLVYFPYDYIYPEQYAYMQELKRALDAQGHCALEMPSGTGKTVSLLSLIVAYMKQRP 90
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
+ KLIYC+RTV E+EK + ELK L Y R G + ++ + LSSRKNLC++ +
Sbjct: 91 LDVTKLIYCSRTVPELEKVVEELKNLIEYYERETGEPSTLVGLALSSRKNLCIHPELRGQ 150
Query: 125 ENRDSVDAACRKRTASWVR 143
+ +DA C TAS VR
Sbjct: 151 RDGKEIDARCHAMTASHVR 169
>gi|307186827|gb|EFN72247.1| Probable ATP-dependent RNA helicase DDX12 [Camponotus floridanus]
Length = 861
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 162/683 (23%), Positives = 298/683 (43%), Gaps = 99/683 (14%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAEN 126
K+ +C+RT ++ + + ELK P ++ I + LSSR+N C+N V ++
Sbjct: 194 TKIFFCSRTHSQLTQFVHELKR---------SPYSQDISVVPLSSRQNYCINKSVKRLKH 244
Query: 127 RDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+ ++ C RK+T + C F +K A VL + ++++
Sbjct: 245 INLINETCLQLQRKKTTVKKEKDLKKLKTSSGCPFVPGDQKLLMAEVLT-NIKDIEEIAQ 303
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++ CPY+ +R +Q +++ Y +L + ++ K +V++ DEAHN+ +
Sbjct: 304 KGQENDTCPYYGSRKSLQSGQLILVPYNSILHKSTRDSLGIDL-KGNVLIIDEAHNLLDA 362
Query: 243 CIEALSVSVRRQTLEGATRNL----SRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
IE + SV + G RNL S++ Q +RF++ + + ++L L+ L
Sbjct: 363 -IEGMHSSV----ITG--RNLLHCYSQLLQYQKRFESLFSAKSVLYLSQL--SFCLKKLL 413
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHF--------LHVLR--------RLVQYLRG-- 340
+ + PSD + ++V + + E F +++ + +L+ L+G
Sbjct: 414 TLFGATTKSHPSDEINKSVTPKLYKIEEFELLTEIDTVNIFKLLEFVKTSKLIHKLQGFV 473
Query: 341 -------RLETENVEKEGPVSFVASI----TAHAGIDQKTLRFCYERLHSLMLTLEITDT 389
++ + ++K G F+ SI T+ G T +I+D
Sbjct: 474 EQYGNSIKIHEQKIKKSGITEFLDSIKNKNTSSLGTSN---------------TADISDN 518
Query: 390 DEFLH---IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
+E + I +F + + I I P I +++ + + +
Sbjct: 519 NEEQTSNPLMVILNFLECLKSRCIDGRICILP----AATIGQGIIKFLLLNPATHFHDIV 574
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLTRGSDQL 500
+SVV+ GT+ P+ + L M+ + D + P V+ RG +
Sbjct: 575 RDARSVVLAGGTMEPMSEFIDQLFLMAGAMPDRIMTFSCDHVIPKENIISNVVIRGPTGI 634
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
F R D + G++L+ + +IVP GIV FF SYSY D + + SGI +I
Sbjct: 635 EFEFNFHNRQDTKLLDELGRVLLNLCNIVPAGIVAFFPSYSYEDIVFKHLDKSGIASKIS 694
Query: 561 QHKLVFIETQDVVETTLALDNY-------RKACDCGRGAVFFSVARGKVAEGIDFDRHYG 613
K ++ E + + + LD Y + C+ G++ FSV GK++EG++F G
Sbjct: 695 IKKRIYREPKLASQVNVILDQYANFIKNPQPPCN---GSLLFSVVGGKLSEGLNFSDDLG 751
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADY 672
R +I+ G+P+ S L +++YL + + G +F ++ QC+GR +R DY
Sbjct: 752 RCIIVVGLPYSNIKSPELQEKMKYLNEHVKSDAGSNFYENSCMKAVNQCIGRSVRHINDY 811
Query: 673 GMMIFADKRYSRHDKRSKLPGWI 695
++ DKRY RH K LP WI
Sbjct: 812 STVVLLDKRY-RH-KVKVLPQWI 832
>gi|389852278|ref|YP_006354512.1| DNA repair helicase rad3 [Pyrococcus sp. ST04]
gi|388249584|gb|AFK22437.1| DNA repair helicase rad3 [Pyrococcus sp. ST04]
Length = 639
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 177/716 (24%), Positives = 319/716 (44%), Gaps = 115/716 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLL-EMPTGTGKTIALLSLITSYVLSKPENPVK 69
YFPY ++ P Q + +EL R KG L+ E PTG GKTI++L+ + Y +S K
Sbjct: 4 YFPYKSLRPNQKEF-IELVRESVKKGESLIVEAPTGFGKTISVLAGVLPYAIS---FGYK 59
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA-AENRD 128
+IY RT +M++ + ELK + + A++ + SRK+LC++S + A++
Sbjct: 60 VIYLARTHKQMDRVIEELKAIRS--------VARVSGVEFRSRKDLCLHSYIQTFAQDAY 111
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ------DLRA 182
+ C+ +R L C+FFEN K+ V + L+ ++
Sbjct: 112 TSMIVCKS-----LRKLG-------KCQFFENI-KSKKEQVKEIIEFFLERPSFPSEVLE 158
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNI 239
+ + CPY + R + + ANV+V SY Y+++P + + + +++FDEAHN+
Sbjct: 159 YSQLLELCPYEITRKVGEKANVIVASYLYMINPWIRQAFMDSLGVDYSDLIIIFDEAHNV 218
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEYNRLVEGLALRGNL 298
+ I ALS + +++E A + + +IE+F L YN+ +E
Sbjct: 219 PDQAISALSDRLSVRSIERAIKEAHEYGEDDIEQFLLVFLKGLEIIYNKRLENY----ET 274
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL----RRLVQYLRGRLETENVEKEGPVS 354
P P P +I EH L +L + LV+ + +E + +E +
Sbjct: 275 PEV----PLKPEEIF-----------EHPLFILGYSSKDLVEIINYMVEIGDAIREDKIE 319
Query: 355 FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
++ G + F + L + +++LH+ ++R
Sbjct: 320 RNLPPRSYVG---RVGEFLWN-------WLSLAGREDYLHL------------FSR---- 353
Query: 415 IIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPV 474
ER + L+L D S+A+ S + SGTL+P++ + ++
Sbjct: 354 ------ER-----NLALELVALDPSVALD-FLKEVHSAIFMSGTLTPLEAFRDIIGVEAK 401
Query: 475 VSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIV 534
+ +M + + I +++ R VST+ + RS P + + + ++E VSI+P +
Sbjct: 402 TKKFPRMVKSENAI--VLVARD-----VSTRGEERS-PSLYKKIAEYILEAVSIIPKNVG 453
Query: 535 CFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACDCGRGA 592
F SY ++ I++T I ++I K VFIE +D E + ++K GA
Sbjct: 454 VFTASYEVLEGILSTNVHIKIEEDI--GKKVFIEKKDATSRENDAMIAEFKKEAK-KEGA 510
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF 652
V F V G+ +EG D+ V++ G+P+ ++ A++ Y F K G + +
Sbjct: 511 VLFGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPTPRV-QAQIRYFEKKFPGK-GRYYGY 568
Query: 653 --DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNL 706
A R+ AQ GRV RS + G ++ D R ++ + LP WI+ ++ L L
Sbjct: 569 ILPAHRKLAQAAGRVHRSAEERGSIVILDYRALWNNVKKDLPDWIVETMQPVTLPL 624
>gi|123437769|ref|XP_001309677.1| helicase [Trichomonas vaginalis G3]
gi|121891414|gb|EAX96747.1| helicase, putative [Trichomonas vaginalis G3]
Length = 859
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 164/674 (24%), Positives = 288/674 (42%), Gaps = 85/674 (12%)
Query: 39 LLEMPTGTGKTIALLSLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL 98
LLE PTGTGKT++LL ++ + +++Y +RT ++ + ELK +TR
Sbjct: 15 LLESPTGTGKTLSLLCSTLAWK-EQTHYRCQIVYSSRTHSQLSNVIEELK-----KTRFK 68
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLAAEN----RDSVDAACRKRTASWVRALAAENPN--I 152
A I +SRK LC+N + +N R + +K+ + N N +
Sbjct: 69 PRVAHI-----ASRKMLCINHTINKYDNFLITRLCHNLRSKKQCPYGIDENLMSNSNEVL 123
Query: 153 ETCEFFENY-EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQY 211
C E Y E A+ + CPYF A+ + A++++ Y Y
Sbjct: 124 TACSDIEEYIENCANHMI--------------------CPYFAAQINSEQADLILTPYTY 163
Query: 212 LLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE 271
++DP V + +V++FDEAHN + C EA S + ++ A L +I E
Sbjct: 164 IVDPNVRQFLPSTTLVGNVLIFDEAHNFADTCSEAYSAKIYFKSFNDAALTLMKI--EPN 221
Query: 272 RF-KATDAGRLRAEYNRLVEGLALRGNLPNAW--LSNPALPSDILKEAVPGNIRRAEHFL 328
RF AT + + N L+ A+ N+ L N E+V + + +
Sbjct: 222 RFSNATRNSKAKVNGNDLLSTRAILMNIFQKCDTLENTDYEYKTACESVSSSAKSVLYVK 281
Query: 329 HVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT---LE 385
+L + R AG+ ++ R Y L ++ L+
Sbjct: 282 KTAEQLYAFFRD----------------------AGLTKENSRLVYSVLDLVVQKGDELQ 319
Query: 386 ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP--HIPDPVLQLSCHDASLAVK 443
I + +EF +Q+I F L+ + +E FD + + + + C S+A+K
Sbjct: 320 ILN-NEFGSMQSIMSFIDLIFP---NATEAVEMFDSKFSILFTTNRTISIICFSPSIAMK 375
Query: 444 PVFDRF-QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG-SDQLP 501
V D +++++TSGTLSP+ L + + ++ D + G S Q
Sbjct: 376 KVADFLPKTMILTSGTLSPLSSLEDELEYKFPIKLECNHIVSPDNFLVAIANSGISGQRF 435
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
T + R + + + ++ + P G + FF S+SYMDE+ I +
Sbjct: 436 NFTYQNRRGNNRLESELVDSVTDVFKVSPSGALLFFPSFSYMDEV-----SRSISSNASR 490
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
K ++IE +D V+ L+NY++ D +GA +V RG+ +EG+DF + R V + G+
Sbjct: 491 VKRIYIEAKDAVKQATVLENYKR--DAMKGAALLAVCRGRSSEGLDFVDDFARFVGVVGI 548
Query: 622 PFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
P+ + + E+L + K + T A+R Q +GR IR DY ++ D+R
Sbjct: 549 PYPTFTDYTVELKREWLENKKPGKGLKWYTECAVRAVNQSIGRAIRHIDDYAAIVLFDER 608
Query: 682 YSRHDKRSKLPGWI 695
++ + +L W+
Sbjct: 609 FT--GLKDQLSKWM 620
>gi|219110231|ref|XP_002176867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411402|gb|EEC51330.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 791
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 180/777 (23%), Positives = 315/777 (40%), Gaps = 145/777 (18%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL-------------- 53
V V+FP+ Y Q +YM ++ AL + LLE PTGTGKT+ LL
Sbjct: 44 VRVHFPF-RPYKCQETYMEKVLDALLRSENALLESPTGTGKTLCLLCSTLAWQREQSRLL 102
Query: 54 -------SLITSYVLSKPENPVK------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGP 100
+ S + + + P + +IY +RT ++ + + EL+ Y+ +H
Sbjct: 103 QQASELQNTDASLLANSQDAPARAARVPTIIYASRTHSQLSQVVRELRNTR-YRPQH--- 158
Query: 101 AAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFEN 160
A+ L SR +CVN +V C +A+ V ++ C F N
Sbjct: 159 -----AV-LGSRDQMCVNPKV--------KKQGC---SATDVNHDCSKLGKDRKCRFRNN 201
Query: 161 YEKAASAAVLPPGVYT-----LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP 215
+ + A G T ++DL GK CP++ R +V A +++ Y YL D
Sbjct: 202 LDGFTAPANENSGTNTQPVMDMEDLVTMGKSHKVCPFYYTRALVAKAELILVPYNYLFDK 261
Query: 216 KV-AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE--- 271
A +S +V++FDEAHN+++ E+ S + + G + + ++
Sbjct: 262 DARATTLSDIPWDNAVLIFDEAHNLESFASESASFDLSNTDISGCIAEVQKAGNYLQAMP 321
Query: 272 ----RFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
K + +L+A + +L + L GN A+ + D ++ N E F
Sbjct: 322 DLGSNLKEENLVKLKAIFLKLEDYLMGLGN-QTAYTGEFMM--DFFQQGGGVNHSNHEIF 378
Query: 328 LHVLRR---LVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTL 384
+ LR+ L+ +RG T+ K FV + R E+L S L
Sbjct: 379 IEELRKVNDLLLDMRGTGATKGSPKL--EHFVQCLK----------RVFGEKLESRCLAK 426
Query: 385 EITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMP---HIPDPVLQLSCHDASLA 441
+ + + + P ++R HI + C +LA
Sbjct: 427 SAS------------------------YRVHVSPKEQRQSGKQHIASRTVSYWCFAPALA 462
Query: 442 VKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
++ + +S+++TSGTLSP+ Y L + + ++ + I V+ +G
Sbjct: 463 MEELASLNVRSIIVTSGTLSPLPSYSMELGLNFPHTLENPHIVSDNQIHVRVIGKGVSGK 522
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI----- 555
+++ ++ R D G LV + + P G++ FF SYS M+ I W +
Sbjct: 523 ELTSSYERRKDGEYYSELGNTLVALSKVTPAGMLVFFPSYSVMETCIERWGGPSLNYNIK 582
Query: 556 -----LKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR--GAVFFSVARGKVAEGIDF 608
K ++ K V +E + A+ ++ + + G + V RGK++EGIDF
Sbjct: 583 SPKTPWKRLLSTKSVVVEPKSSANLPEAIADFHRFLGMLKSPGCILMGVCRGKISEGIDF 642
Query: 609 DRHYGRLVIMFGVPFQYTL-SKILLAR--LEYLRDTFQIKEG------------------ 647
R V++ G+PF + +K+ L R L+ R +K
Sbjct: 643 ANEQSRAVVITGLPFPPSFDAKVKLKRDFLDGARAIGSMKASNVGGFADNASSTSNLATK 702
Query: 648 ----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
D+ A R Q +GRVIR+++DYG ++ D R+S+ + L W+ HL+
Sbjct: 703 LSGHDWYAQQAHRAVNQAIGRVIRNRSDYGAVLLLDSRFSQQRNQEGLSKWVRPHLK 759
>gi|356522168|ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Glycine max]
Length = 897
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 182/735 (24%), Positives = 296/735 (40%), Gaps = 142/735 (19%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+K+ +C+RT ++ + + EL R A ++ + L SRKNLC+N V+A N
Sbjct: 188 LKVYFCSRTHSQLSQFIKEL--------RRTVFANEMNVVSLGSRKNLCINEEVVALGNS 239
Query: 128 DSVDAAC------RKRTASWVRALAAENPNIET-----CEFFENY--EKAASAAVLPPGV 174
++ C +K A+ V+ L T C + ++ V G
Sbjct: 240 TRINERCLELQKKKKNEATKVKNLKVGAGVCRTKASSGCPMLRKHRVQQEFRNEVSQQGP 299
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL G+ G CPY+ +R +VQ A++VV YQ LL + + K ++++ D
Sbjct: 300 LDIEDLANLGRTMGACPYYGSRSLVQGADLVVLPYQSLLSKSSRETLGLNL-KSNIIIID 358
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE--------RFKATDAGRLRAEYN 286
EAHN+ + I + LE R++ R + R+ T +RA
Sbjct: 359 EAHNLADSLINMYDSKITSSQLEIVHRHVERYFERFRNLLGPANRRYIQTLMVLMRAFLR 418
Query: 287 RLVEGLALRGNLPNAWLSNPALP------------SDILKEAVPGNIRRAEHFLHVLRRL 334
L++ GNL ++ +D L E NI L +L
Sbjct: 419 ALLDDKD--GNLKDSCRDTAQASEESGACDFTMAINDFLFELNIDNIN--------LVKL 468
Query: 335 VQYLRGRLETENVEKEG-PVSFVASITA-HAGIDQKTLRFC---YERLHSLMLTLEITDT 389
++Y++ V G V+ +A I A H +Q C ++ L ++L+L D
Sbjct: 469 LKYIKESNIMHKVNGYGEKVATLAKIPAIHIIGEQAEEGSCISAFQALADILLSLTNNDG 528
Query: 390 DEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRF 449
D ++ + +R S F ++ HI +L + D
Sbjct: 529 D-----------GRIIISRSRSTS-----FKKQGGHIKYVMLS-----GEKIFSEIVDEA 567
Query: 450 QSVVITSGTLSPID---------LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
+VV+ GTL PI+ L P L+F S + D I P+ +TRG
Sbjct: 568 HAVVLVGGTLQPIEETRERLFPWLPPNQLHFF-----SCGHIVPPDSIMPIAVTRGPTGR 622
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
F RS P + R G LL +V++V +GIV FF S+ Y + + W SGIL+ I+
Sbjct: 623 SFDFSFSSRSSPDMMRELGLLLCNLVTVVHEGIVVFFPSFDYENRVYEHWKSSGILERII 682
Query: 561 QHKLVFIETQDVVETTLALDNYRKACD------------CGRGAVFFSVARGKVAEGIDF 608
+ K VF E ++ ++ L Y+ D GA+ +V K++EGI+
Sbjct: 683 KRKRVFREPRNNMDVESVLKEYKDTIDTISVMNSEVNQASHNGAILLAVVGAKLSEGINL 742
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLR--------------DTFQIKEGDFL-TFD 653
GR ++M G+P+ LL R++++ ++ + GD FD
Sbjct: 743 SDGMGRCIVMVGLPYPSPSDIELLERIKHIEGFRNLKLPENPSVSSSYDLYSGDVQGGFD 802
Query: 654 ALRQAA----------------QCVGRVIRSKADYGMMIFADKRY-SRHDKRS------K 690
LR + Q +GR IR DY ++ D RY S KRS K
Sbjct: 803 ILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVTK 862
Query: 691 LPGWILSHLRDAHLN 705
LP WI + +N
Sbjct: 863 LPQWIKDRFVSSTIN 877
>gi|402467806|gb|EJW03051.1| DNA repair helicase (rad3) [Edhazardia aedis USNM 41457]
Length = 704
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 175/724 (24%), Positives = 305/724 (42%), Gaps = 139/724 (19%)
Query: 39 LLEMPTGTGKTIALLSLITSYVL-------------SKPEN--PVKLIYCTRTVHEMEKT 83
L+E PTGTGKT ++L + SY+ SK N K+ CTRT ++ +
Sbjct: 37 LIESPTGTGKTYSILCSVLSYLSNTKSFKDSRDTKDSKENNNRKPKIFICTRTHKQISQM 96
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVR 143
L L R L +I LSSR LC+N V A +R+ AC ++
Sbjct: 97 LDSL--------RKLSDVPQIAV--LSSRTQLCINQIVKIASDRND---AC-------LK 136
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+ +N C++FEN + A L + +++L GK CPYF R + A+
Sbjct: 137 LIKKKN----GCKYFENTDSLAQN--LSSKIMDIEELAKAGKTMAGCPYFAMRKLQATAD 190
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
++ Y YL+DP + ++ E+ K +VV+ DEAHNI++ C A S + +
Sbjct: 191 IIFAPYNYLVDPSIRASLNIEL-KNAVVIVDEAHNIEDFCRSAGS-------FQATSELF 242
Query: 264 SRINQEIERFKATDAGRLRAEYNRLVEGL----------ALRGNLPNAWLSNPALPSD-- 311
I EI++ +LV G+ +RG L L PS
Sbjct: 243 VIIIDEIKK--------------KLVNGMIAPEIVAHLQTIRGFL----LIFTQFPSKNG 284
Query: 312 ILKEAVPGNIRRAEHFLHVLRRLVQYLRG--RLETENVEKEGPVSFVASITAHAGIDQKT 369
K + G I + +++ H +L + ++ + + ++A + KT
Sbjct: 285 SAKHDMKGKIGKFDNYSHQFSNKHNFLSSDKKFSVQSQMNKSKTFPQSKVSAKNNENVKT 344
Query: 370 LRFCYERLHSLMLTLE-ITDTDEFLHIQTICDFATLVG-TYTRGFSIIIEPFDERMPHIP 427
R E L S+ + E + + L+ + ++ L+ +Y + S ++ + + H P
Sbjct: 345 GREIIEFLESMNIKKEMVLLLKQSLNALSDENYRDLISPSYIKLMSSLVYVLEHILFHSP 404
Query: 428 DPV---LQLSCHDASLAV-----------KPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
D L++S +S ++ KP +SV++ SGTL P + L F
Sbjct: 405 DCYAFQLKISETSSSFSINFWLLDPAVIFKPFACAAKSVILLSGTLKPFESLRSELGF-- 462
Query: 474 VVSRSFKMS-----LTRDC-ICPMVLTRGS------DQLPVSTKFDMRSDPG-----VAR 516
SFK + + +D IC ++ +G + S F+ + +
Sbjct: 463 ----SFKNAVEAPHVIKDTNICVSIIKKGHLGKELIGKYGDSESFEYLDQIKHILLMIKK 518
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
N GK GI+ F SY++++ K + ++ E++ E
Sbjct: 519 NLGK---------AGGILVFVPSYTFLE---------NFQKRSTNIENIYFESKSAAEFG 560
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
L ++K D + V RG+ AEG+DF ++ R+V+ G+P+ ++++
Sbjct: 561 KILRKFKKDADTSV-PICMCVYRGRAAEGMDFKDNHARVVVALGIPYPAYKDPEVVSKRM 619
Query: 637 YLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIL 696
Y +IK + F A R Q +GRV+R K D+G ++F D RY H ++ LP W+
Sbjct: 620 YNDKNKEIKGQMWYEFQAFRAVNQAIGRVVRHKNDWGAVVFLDSRYCWHKNQTHLPKWVK 679
Query: 697 SHLR 700
++L+
Sbjct: 680 TNLK 683
>gi|205716435|sp|A8MPP1.1|D11L8_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX11-like
protein 8; AltName: Full=DEAD/H box protein 11-like 8
Length = 907
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 170/672 (25%), Positives = 279/672 (41%), Gaps = 65/672 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ +C+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 229 TKIYHCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVRSLGSV 280
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 281 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 340
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 341 QLLALGKEARACPYYRSRLAIPAAKLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 399
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 400 LIDTITGMHSVEVSGSQLCQAHSQLLQYMERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 459
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 460 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 515
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD------EFLHIQTICDFA 402
+ G V AG Q +L + + +HI+ F
Sbjct: 516 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASVPQPASPLMHIE---GFL 572
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + + L+ + ++ V ++VVI GT+ P+
Sbjct: 573 AALTTANQDGRVILS----RQGSLSESTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 628
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 629 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNI-PLVICSGISNQPLEFTFQKRDLPQMMD 687
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE---TQDVV 573
G++L + +V G+VCFF SY Y+ ++ A W G+L + K +F E V
Sbjct: 688 EVGRILCNLCGVVSGGVVCFFSSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 747
Query: 574 ETTLALDNYRKACDCGRG----AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC RG A+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 748 QVLLAYSRCIQACGQERGQVTEALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 807
Query: 630 ILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
L ++ YL T Q G L + ++ Q +GR IR + D+ ++ D+RY+
Sbjct: 808 ELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 867
Query: 684 RHDKRSKLPGWI 695
R +KLP WI
Sbjct: 868 RPPVLAKLPAWI 879
>gi|357631598|gb|EHJ79067.1| FancJ-like protein [Danaus plexippus]
Length = 830
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 160/667 (23%), Positives = 291/667 (43%), Gaps = 81/667 (12%)
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
+ Y RT ++E+ + E +T + A L LSSR++ C+ + S
Sbjct: 198 IYYGARTHKQLEQVVQEFS-----KTVY---AENALMTILSSREHSCIKD--FDIKRWPS 247
Query: 130 VDAACRKRTASWVRALAAENPNIET-CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQG 188
+ CR T + + + ET C +++N++ + + P ++L+ L + G+++
Sbjct: 248 KNDMCRGCTKN------QNSSDSETSCVYYDNHKLLKHSTL--PRAFSLETLLSVGRKKK 299
Query: 189 WCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNIDNVCIE 245
CPY+ AR M A++V Y YL++P I K MQ + +VV+ DEAHNI+++C E
Sbjct: 300 ACPYYAARKMAAVAHIVFCPYSYLIEPA----IRKSMQINLENNVVIIDEAHNIEDICRE 355
Query: 246 ALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSN 305
A + + + +E A + + + RF +A +E L W +N
Sbjct: 356 AATFTFTKLQMENALKEMKAASSF--RFANDEAIDYITYLQTSLEEWCL-------WFAN 406
Query: 306 PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGI 365
L + P N +E+ V + + ET N G + HAGI
Sbjct: 407 ----QKPLLDNQPRNGAASEYAWDVHQFV--------ETLNNHSIGQKQY-PEFNKHAGI 453
Query: 366 DQKTLRFCYERLHSLMLTLEITDTDEFL--HIQTICDF-----ATLVGTYTRGFSIIIEP 418
FC + L + IT + + ++ T+ + T + Y IE
Sbjct: 454 ------FCKKFRDDPRLLVGITQSTNTIIENLDTVLGYLFRNSGTCMDDYKPILVRKIES 507
Query: 419 FDERMPH-----------IPDPV-LQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLY 465
+D H +P+ + L L C + ++ V + VV+ SGTL+P+ L+
Sbjct: 508 YDASYNHNWRKSNFEQKVLPESLSLTLCCLNPAVLFASVLSS-RCVVLASGTLTPMASLH 566
Query: 466 PRL-LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVE 524
L +F VS ++++S R + + +++ +K+ S+ V + G+++
Sbjct: 567 SELGTHFTHAVSATYEISKDRVWVGSLKSGTSGEKICCISKYTSVSN--VQDDLGEMVYG 624
Query: 525 MVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK 584
+ + P G++CF SY M+ ++ W S + + + K VF+E+ + + +
Sbjct: 625 VCDVTPHGVLCFLPSYRLMNLLVKRWRYSHLWERLEAKKHVFVESTHMKTHVNMMKAFDN 684
Query: 585 ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF---QYTLSKILLARLEYLRDT 641
RGA+ +V RGKVAEG+DF H R VI G+P+ + + + +Y ++
Sbjct: 685 CVGTDRGALLLAVYRGKVAEGMDFKDHQARAVIAIGIPYPSKDRAVEEKMKYNDKYSKNR 744
Query: 642 FQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
+ ++L A R Q VGRV+R D+G ++ D RY L W+ L
Sbjct: 745 NLLNGREWLKIQAYRALNQAVGRVMRHVGDWGGVLLVDSRYQEPQYSEHLAQWVKDLLGK 804
Query: 702 AHLNLST 708
H + ++
Sbjct: 805 NHHDFNS 811
>gi|332158988|ref|YP_004424267.1| DNA repair helicase rad3 [Pyrococcus sp. NA2]
gi|331034451|gb|AEC52263.1| DNA repair helicase rad3 [Pyrococcus sp. NA2]
Length = 638
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 176/711 (24%), Positives = 316/711 (44%), Gaps = 105/711 (14%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY + P Q ++ ++ ++ + ++E PTG GKTI++L+ + Y +S K+
Sbjct: 4 YFPYKTLRPNQKEFIELVRESVRKGENIIIEAPTGFGKTISVLAGVLPYAISL---GYKV 60
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
IY RT +M++ + ELK++ A++ I SR++LC+++ + +
Sbjct: 61 IYLARTHKQMDRVIEELKMIRE--------IARVSGIEFRSRRDLCLHTYL----KNFAQ 108
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ------DLRAFG 184
DA +R L C+FFEN K +V + L+ ++ +
Sbjct: 109 DAYTSMIVCKTLRKLG-------KCKFFENI-KEKKDSVREIIEFFLESPSFPWEVIEYS 160
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNIDN 241
CPY + R + + ANV+V SY Y+++P + + + + +V+FDEAHNI +
Sbjct: 161 SLLELCPYEVTRKVGEKANVIVASYLYMINPWIRQAFMESLGLDYSDLIVIFDEAHNIPD 220
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNA 301
I ALS + +T+E A + E E + D + + R +E L R L N
Sbjct: 221 QAISALSDRLSIRTIERAIK-------EAEEYGEKDIANFLSIFLRGLEIL-YREKLENY 272
Query: 302 WLSN-PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKE-GPVSFVASI 359
+ P P +I L VL +V+ + + + +E+ P S++
Sbjct: 273 EIQEVPLSPMEIFSHVASILGFETRDILMVLNDMVE-IGDAIREDRIERNLPPRSYIG-- 329
Query: 360 TAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPF 419
+T F L+ L + D +++H+ FS
Sbjct: 330 --------RTGEF-------LLNWLSLMDRSDYIHL----------------FS------ 352
Query: 420 DERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSF 479
ER P L+L D S+A+ + D S + SGTL+P++ + ++ + +
Sbjct: 353 KER-----GPALELVALDPSIALDFLND-VHSAIFMSGTLTPLEAFRDIIGVQAKLKKFP 406
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
++ + + I +++ R VST+ + R+ P + + + + E V I+P + F S
Sbjct: 407 RIVKSENAI--VLVARD-----VSTRGEERT-PALYKKLAEYVFEAVKIIPKNVGVFTAS 458
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIETQDV--VETTLALDNYRKACDCGRGAVFFSV 597
Y ++ +++T I +EI K VFIE +D E + + KA GRG V F V
Sbjct: 459 YEVLEGLLSTNVHIKIEEEI--GKRVFIEKRDASSAENDAMVAEF-KAEAKGRGGVLFGV 515
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF--DAL 655
G+ +EG D+ V++ G+P+ ++ A++ Y F K G + + A
Sbjct: 516 MGGRNSEGQDYSGDEMNGVVLVGIPYAKPTPRV-QAQIRYYEKKFPGK-GRYYGYLLPAH 573
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNL 706
R+ AQ GRV RS+ + G ++ D R + + LP WI+ ++ L L
Sbjct: 574 RKLAQAAGRVHRSEEERGSIVILDYRVLWNTVKRDLPDWIVEAIQPVTLPL 624
>gi|168063226|ref|XP_001783574.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664903|gb|EDQ51606.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 858
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 162/700 (23%), Positives = 290/700 (41%), Gaps = 90/700 (12%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVN-SRVLAAE 125
P+K+ +C+RT ++ + + ELK +T+ A + + L SRK LC+N + V +
Sbjct: 154 PLKVFFCSRTHSQLSQFVGELK-----RTKF---ATSLQTVSLGSRKTLCINPADVAKLK 205
Query: 126 NRDSVDAAC----RKRTASWVRALAAENPNIET-------CEFF--ENYEKAASAAVLPP 172
+ + ++ C + +++ + A ++ ++ C + ++ +
Sbjct: 206 SSERINERCLELHKAKSSGQAGSKAVKDNQMQKRKVKSSGCPMLKKQRLQRQFKEKLELS 265
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
G ++DL G++ G CPY+ +R V A+VVV YQ LL + ++ K+ V++
Sbjct: 266 GAMDVEDLVKLGQELGTCPYYGSRRAVPAADVVVLPYQSLLHSATRETLGVKL-KDCVII 324
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
DEAHN+ + S V L+ + S++++ +E+FK RL R +E L
Sbjct: 325 IDEAHNLVDTVSNIYSCQVSVTQLKQVS---SQLSEYLEKFK----NRLAESNRRYIETL 377
Query: 293 ALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR----GRLETENVE 348
L L+ P KE G R + + + V L+ L+ +
Sbjct: 378 LLLIKALLDCLAVPQQGGS--KERQNG---RTDSKMLTINDFVFSLKIDSINLLKLRHYI 432
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY 408
KE + S ++T+ R ++ ++ + + DF +
Sbjct: 433 KESNIVHKVSSYGEKLTLEQTVSTSQSRSGVPKGSVPQSN-NALTGFHALADFVLALTNA 491
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID----- 463
+ +++ P + + D L+ +A+ + + ++V++ GTL PI
Sbjct: 492 DKDGRVLVVPSVGKGLELWDGHLKFIMLNATKHFTEIVEEARTVILAGGTLQPISELRDR 551
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLV 523
L+P+L + V S + R+ I P+ + +G + RS G+L+
Sbjct: 552 LFPQLPH-EKVHLFSCGHIVPRESILPIAIAKGPGGHTFDFTYQSRSCQTTIEELGRLIN 610
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR 583
+ SIVP+GIV FF S+ Y ++ ATW D GIL I K V+ E + E L YR
Sbjct: 611 NVSSIVPEGIVVFFPSFEYESQVHATWTDKGILASIQMKKHVYREPRSASEVEDVLQKYR 670
Query: 584 KA-----------CDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
+ + RGA+ V GK++EGI+F GR V+M G+P+ L+
Sbjct: 671 NSITKTSDKADITTENRRGALLLCVVGGKMSEGINFSDGMGRCVVMVGLPYPNPSDPELI 730
Query: 633 ARLEYLRDTFQIKEG----------------------DFLTFDALRQAAQCVGRVIRSKA 670
R+ Y+ + G ++ ++ Q +GR IR
Sbjct: 731 ERIRYIEQLSAAEAGVGNDGAALNGNNVLQRCGQRGREYYENLCMKAVNQSIGRAIRHIG 790
Query: 671 DYGMMIFADKRYSR-----------HDKRSKLPGWILSHL 699
DY ++ D RY+ SKLP WIL L
Sbjct: 791 DYAAILLVDVRYTSTSGPPGPNAKPSGPASKLPDWILERL 830
>gi|337283773|ref|YP_004623247.1| DNA repair helicase rad3 [Pyrococcus yayanosii CH1]
gi|334899707|gb|AEH23975.1| DNA repair helicase rad3 [Pyrococcus yayanosii CH1]
Length = 641
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 178/734 (24%), Positives = 315/734 (42%), Gaps = 109/734 (14%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY+++ P Q ++ + A+ + ++E PTG GKTI++L+ I + ++ K+
Sbjct: 4 YFPYESLRPNQEEFIRLVSDAVRKGKNLIVEAPTGFGKTISVLAGILPHAIAM---GYKV 60
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + ELK +G AK+ + SRK LC++ + S
Sbjct: 61 VYLARTHKQMDRVIEELKA--------IGRKAKVSGVEFRSRKELCLHPYIQTF----SP 108
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENY-EKAASAAVLPPGVYTL----QDLRAFGK 185
DA ++ L C F+EN+ EK + L T ++ + +
Sbjct: 109 DAYNAMVVCKNLKKLG-------KCPFYENFKEKREGVSELVEFFLTTPGHPSEIVHYCR 161
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES---VVVFDEAHNIDNV 242
CPY + R + + A V+V SY Y++ P + + + E ++VFDEAHN+ +
Sbjct: 162 LLELCPYEVTRRVGEKATVIVASYLYMVSPPIREAFLEGLGLEYSDLILVFDEAHNLPDQ 221
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEYNRLVEGLALRGNLPNA 301
+ ALS + ++LE A + + +IE F L Y ++
Sbjct: 222 AVSALSDRLSLRSLERAVKEAQEYGEGDIESFLLILLRGLELLYEERLKNYEA------- 274
Query: 302 WLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITA 361
P P DI + + E ++ R +V+ L +E + +E + +
Sbjct: 275 -YEVPIRPEDIFRHVI-------EVTGYLGRAIVRMLNDMVEVGDAIREDRIERNLPPRS 326
Query: 362 HAGIDQKTLRFCYERLHSLMLT-LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFD 420
+ G R+ +LT L + +++++LH+ + +G S
Sbjct: 327 YIG-----------RVGEFLLTWLSLANSEDYLHLM----------SREKGLS------- 358
Query: 421 ERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFK 480
L++ D S A+ V + S + SGTLSP++ + ++ + + F
Sbjct: 359 ----------LEIVALDPSRALDFV-EEVHSAIFMSGTLSPLEAFRDIIGVEAEL-KKFP 406
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
+ R+ +V VST+ + RS PG+ R + + E V + P + F SY
Sbjct: 407 RIVKRENALVLVAR------DVSTRGEERS-PGLYRRLAEYIFEAVRLTPKNVGVFTASY 459
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE-TTLALDNYRKACDCGRGAVFFSVAR 599
+D +I+T I +E+ K VFIE + AL KA G GAV F V
Sbjct: 460 EVLDGLISTNIHVKIEEEL--GKKVFIEKKGASSRENDALVAQFKAEAKGNGAVLFGVMG 517
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF--DALRQ 657
G+ +EG D+ V++ G+P+ ++ A++ Y F K G + + A R+
Sbjct: 518 GRNSEGQDYSGDEMNGVVLVGIPYARPTPRV-QAQIRYFEKKFPGK-GRYYGYVLPAHRK 575
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
AQ GRV RS + G ++ D R + + LP W++ +R + L R
Sbjct: 576 LAQAAGRVHRSAEERGSIVILDYRVLWKNVKKDLPDWMVETMR--------AVTLPTMRL 627
Query: 718 FLRKMAQPYDKAGS 731
+LRK + D+ G+
Sbjct: 628 YLRKFWRGKDEGGN 641
>gi|405976070|gb|EKC40591.1| Putative ATP-dependent RNA helicase DDX11 [Crassostrea gigas]
Length = 921
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 168/730 (23%), Positives = 290/730 (39%), Gaps = 172/730 (23%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV------ 121
++ YC+RT ++ + + E+ + Y G ++L++G SR+N+CVN V
Sbjct: 242 TRIYYCSRTHSQLAQFVREI-IKSPY-----GSNTRVLSLG--SRQNMCVNDEVRKLNSL 293
Query: 122 ---------------LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAAS 166
E ++S +A +KR + L + C F++
Sbjct: 294 SMMNDMCLDLQKNKSKGTEKKESDEAVQKKR-----KKLGSNG-----CPFYKQETMEDL 343
Query: 167 AAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226
+ V ++ + G++ CPY+ +R + A VVV Y LL + ++
Sbjct: 344 GNQILTEVTDMEQIVISGRRMKACPYYTSRLSLPLAEVVVLPYNILLHKAMREASGIRLE 403
Query: 227 KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYN 286
++V+ DEAHN+ SV + GA LS+ + ++ +F++ RL+A+
Sbjct: 404 G-NIVLIDEAHNLLETINAVYSVMIT-----GA--QLSKAHSQLSQFRS----RLKAK-- 449
Query: 287 RLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
N+ + L VL L+++L GR + +
Sbjct: 450 ---------------------------------NLLYVKQILFVLNCLLRFLEGRTDNKK 476
Query: 347 VEKEGPVSFVASIT---AHAGIDQ----KTLRFCYERLHSLMLT---------------- 383
E S V ++ + +G D K L++C + S L
Sbjct: 477 QRSEKSESKVLTVNQFLSDSGFDNINLFKILQYCRKSQISKKLNGFVEKYANCEVQIADK 536
Query: 384 -----------LEITDTDEFL------------------------HIQTICDFATLVGTY 408
EI T E L HI+ FA+L
Sbjct: 537 PKENVGISGFLKEIAQTKENLVEETQTTDNTRQSEKAVVMRSPLAHIEGF--FASLTSAD 594
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
G ++ R + + L+ + ++ K V + +SVV+ GT+ P++ + +
Sbjct: 595 KDGRIVLT-----RHTLLKESTLKFLQMNPAVHFKDVLSQARSVVVAGGTMQPVEEFKQQ 649
Query: 469 L---------NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
L N H S + D + + + G + F R + + G
Sbjct: 650 LFYAAGIGPENIHEY---SCGHVIPSDHLLALAMKSGPLGVDFDFTFSSRENSALLNELG 706
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLAL 579
++ + +I+P G+VCFF SY Y + WN SGIL ++ + K +F E + + L
Sbjct: 707 LVISNVCNIIPGGVVCFFPSYKYQHLVYQHWNKSGILAKLEKKKKIFQEPKLSSQVEQVL 766
Query: 580 DNYRKACD---CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
Y K+ G GA+ V GK++EGI+F GR VIM G+P+ +S L +++
Sbjct: 767 GEYSKSIQKGVKGTGAILLCVVGGKMSEGINFSDDLGRCVIMVGMPYPNIMSPELQEKMQ 826
Query: 637 YLRDTF-QIKEGDF---LTFDAL--RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK 690
YL F + K+G + ++ L + Q +GR IR DY ++ DKRY R RSK
Sbjct: 827 YLNSNFPKDKDGHLPGQIHYENLCMKAVNQSIGRAIRHSQDYATILLLDKRYCRESVRSK 886
Query: 691 LPGWILSHLR 700
LP WI L+
Sbjct: 887 LPTWIAKDLQ 896
>gi|224059074|ref|XP_002299703.1| predicted protein [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| predicted protein [Populus trichocarpa]
Length = 918
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 184/732 (25%), Positives = 284/732 (38%), Gaps = 139/732 (18%)
Query: 69 KLIYCTRTVHEMEKTLAELK--LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
K+ +C+RT ++ + + EL+ L N +I + L SRKN C+N VL +
Sbjct: 210 KIYFCSRTHSQLSQFIKELRKTLFSN----------EINVVCLGSRKNFCINEEVLKLGS 259
Query: 127 RDSVDAAC------RKRTASWVRALAAENPNIET-----CEFFENY--EKAASAAVLPPG 173
V+ C +K S ++ +AE T C + +K G
Sbjct: 260 SVRVNERCLELQKNKKNEVSKIKNFSAEGRIRRTKASSGCPMLRKHKLQKEFRNETSQHG 319
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++DL G+ G CPY+ +R MV A++VV YQ LL + + K S++V
Sbjct: 320 ALDIEDLVRIGRSIGTCPYYGSRSMVPAADLVVLPYQSLLSKSSRESLGLNL-KNSIIVI 378
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKAT-DAGRLRAEYNRLVEGL 292
DEAHN+ + I + LE S I + RF+ G R +V
Sbjct: 379 DEAHNLADSLISMYDAKITSSQLESVH---SHIEKYFTRFRNLLGPGNRRYIQTLMVLTR 435
Query: 293 ALRGNLPNAW-LSN------PALPSDILKEAVPGNIRRAEHFLHVLR-------RLVQYL 338
A L N LSN + +D K+AV FL L +L+QY+
Sbjct: 436 AFLQTLDNKKDLSNVNNYQAEEIAAD--KKAVCDTSIAINDFLFSLNIDNINLVKLLQYI 493
Query: 339 RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEF-LHIQT 397
+ + V ++ + E++ SL L + EF T
Sbjct: 494 K------------ESNLVHKVSGYG-----------EKVASLQEGLALNRNGEFGEEGST 530
Query: 398 ICDFATLVG-----TYTRGFS-IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQS 451
+ F LV T G +II + L+ + D +
Sbjct: 531 LSSFRALVDMLMSLTNNDGDGRMIISKMRSTCSGLQGGFLKYVMLTGEKIFSEIVDEAHA 590
Query: 452 VVITSGTLSPID---------LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
V++ GTL PI+ L P L+F S + + I P+ ++RG
Sbjct: 591 VILAGGTLQPIEETRERLFPWLPPNQLHFF-----SCSHIVPPESILPIAVSRGPSGQSF 645
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+ RS + G LL +V+ VP+GIV FF S+ Y ++ +W SGIL+ IM+
Sbjct: 646 DFSYSSRSSLVMIEELGLLLCNLVAFVPEGIVVFFSSFEYEGQVYDSWKKSGILERIMRK 705
Query: 563 KLVFIETQDVVETTLALDNYRKACDC-----------GRGAVFFSVARGKVAEGIDFDRH 611
K +F E + + L L Y++ D GAV +V GK++EGI+F
Sbjct: 706 KRIFREPRSNSDVELILKEYKETIDGLSSGTKEDGVRHNGAVLLAVVGGKISEGINFSDG 765
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYL----------RDTFQIKE----GDFLT-FDALR 656
GR ++M G+P+ L+ R++Y+ R + E GD T F LR
Sbjct: 766 MGRCIVMVGLPYPSPSDMELMERVKYIESLGEPNCGKRPEISVGEHYYNGDVQTAFSILR 825
Query: 657 QA----------------AQCVGRVIRSKADYGMMIFADKRYSRHDKRS-------KLPG 693
Q +GR IR DY ++ D RY+ ++ KLP
Sbjct: 826 SCRRRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDMRYASDSSKTSFSHPTNKLPL 885
Query: 694 WILSHLRDAHLN 705
WI L A N
Sbjct: 886 WIKDRLVSATNN 897
>gi|119195411|ref|XP_001248309.1| hypothetical protein CIMG_02080 [Coccidioides immitis RS]
gi|121932141|sp|Q1E5T3.1|CHL1_COCIM RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
Length = 861
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 174/729 (23%), Positives = 304/729 (41%), Gaps = 126/729 (17%)
Query: 33 DAKGHCLLEMPTGTGKTIALLSLITSYVLSK----PENPVKLIYCTRTVHEMEKTLAELK 88
DAK + L + TIALL ++ + EN VK+ YC+RT ++ + EL+
Sbjct: 161 DAKSNSDL-----SATTIALLEKLSGSAEIQDDFEEENAVKIFYCSRTHSQLAQFARELR 215
Query: 89 LL-----------------HNYQTRH----LGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+ RH L K +++G SRK +C+N +V N
Sbjct: 216 RVVFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG--SRKTMCINPKVRRLGNA 273
Query: 128 DSVDAACRKRTASWVRA-----LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+++ C +S V A N F ++ A V+ ++D+
Sbjct: 274 TAINERCLDLQSSNVLPGHKCPFAPSKENELAINDFRDHVLAE--------VHDIEDIGK 325
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++ G CPY+ +R ++ + +V YQ LL + + K+ V++ DEAHN+ +V
Sbjct: 326 IGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISL-KDHVIIIDEAHNLMDV 384
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAW 302
SV+V +L L ++ ++KA G+ NR+ +R
Sbjct: 385 IANIHSVNV---SLTQLRIGLEQLTIYARKYKARLKGK-----NRVYVAQVMR------- 429
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
+L + +YL L + +EG V + + +
Sbjct: 430 ---------------------------LLGSIAKYLESVLAAREL-REGAVD-PSYLMSG 460
Query: 363 AGIDQKTLRFCYERLHSLMLT------LEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
GIDQ L L L +E + + E + +T L + S++
Sbjct: 461 KGIDQINLHKLSRYLQESKLARKVDGYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMN 520
Query: 417 EPFDERM---PHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNF- 471
+ R+ + D +L+ + D + + + ++V++ GT+SP+ D L ++
Sbjct: 521 PSAEGRLFFEKNGNDVLLKYTLLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYL 580
Query: 472 HPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
P R+F + + ++RG F+ R+ + + GK + E+
Sbjct: 581 APGQLRTFSYGHVIPTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKAT 640
Query: 530 PDGIVCFFVSYSYMDEIIATW----NDSG---ILKEIMQHKLVFIETQDVVETTLAL-DN 581
PDG+V FF SY ++++++ W ++SG IL + K + E+++ T AL
Sbjct: 641 PDGVVAFFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAMNTEALLQK 700
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RD 640
Y D G+GA+ SV GK++EGI+F GR VI+ G+PF S A+++Y+ R
Sbjct: 701 YANFIDEGKGALLLSVMGGKLSEGINFSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERK 760
Query: 641 TFQIKEG--------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
T++ G DF +R QC+GR IR + DY ++ D+RY
Sbjct: 761 TYERSSGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTAR 820
Query: 687 KRSKLPGWI 695
+SKLP WI
Sbjct: 821 IQSKLPEWI 829
>gi|392862459|gb|EAS36901.2| ATP-dependent RNA helicase CHL1 [Coccidioides immitis RS]
Length = 908
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 174/729 (23%), Positives = 304/729 (41%), Gaps = 126/729 (17%)
Query: 33 DAKGHCLLEMPTGTGKTIALLSLITSYVLSK----PENPVKLIYCTRTVHEMEKTLAELK 88
DAK + L + TIALL ++ + EN VK+ YC+RT ++ + EL+
Sbjct: 208 DAKSNSDL-----SATTIALLEKLSGSAEIQDDFEEENAVKIFYCSRTHSQLAQFARELR 262
Query: 89 LL-----------------HNYQTRH----LGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+ RH L K +++G SRK +C+N +V N
Sbjct: 263 RVVFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG--SRKTMCINPKVRRLGNA 320
Query: 128 DSVDAACRKRTASWVRA-----LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+++ C +S V A N F ++ A V+ ++D+
Sbjct: 321 TAINERCLDLQSSNVLPGHKCPFAPSKENELAINDFRDHVLAE--------VHDIEDIGK 372
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++ G CPY+ +R ++ + +V YQ LL + + K+ V++ DEAHN+ +V
Sbjct: 373 IGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISL-KDHVIIIDEAHNLMDV 431
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAW 302
SV+V +L L ++ ++KA G+ NR+ +R
Sbjct: 432 IANIHSVNV---SLTQLRIGLEQLTIYARKYKARLKGK-----NRVYVAQVMR------- 476
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
+L + +YL L + +EG V + + +
Sbjct: 477 ---------------------------LLGSIAKYLESVLAAREL-REGAVD-PSYLMSG 507
Query: 363 AGIDQKTLRFCYERLHSLMLT------LEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
GIDQ L L L +E + + E + +T L + S++
Sbjct: 508 KGIDQINLHKLSRYLQESKLARKVDGYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMN 567
Query: 417 EPFDERM---PHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNF- 471
+ R+ + D +L+ + D + + + ++V++ GT+SP+ D L ++
Sbjct: 568 PSAEGRLFFEKNGNDVLLKYTLLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYL 627
Query: 472 HPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
P R+F + + ++RG F+ R+ + + GK + E+
Sbjct: 628 APGQLRTFSYGHVIPTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKAT 687
Query: 530 PDGIVCFFVSYSYMDEIIATW----NDSG---ILKEIMQHKLVFIETQDVVETTLAL-DN 581
PDG+V FF SY ++++++ W ++SG IL + K + E+++ T AL
Sbjct: 688 PDGVVAFFPSYDFLNQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAMNTEALLQK 747
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RD 640
Y D G+GA+ SV GK++EGI+F GR VI+ G+PF S A+++Y+ R
Sbjct: 748 YANFIDEGKGALLLSVMGGKLSEGINFSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERK 807
Query: 641 TFQIKEG--------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
T++ G DF +R QC+GR IR + DY ++ D+RY
Sbjct: 808 TYERSSGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTAR 867
Query: 687 KRSKLPGWI 695
+SKLP WI
Sbjct: 868 IQSKLPEWI 876
>gi|282848158|ref|NP_001164296.1| DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Xenopus (Silurana)
tropicalis]
gi|197246717|gb|AAI68601.1| Unknown (protein for MGC:185780) [Xenopus (Silurana) tropicalis]
Length = 895
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 175/690 (25%), Positives = 291/690 (42%), Gaps = 95/690 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+N+CVN V N
Sbjct: 211 TKIYYCSRTHSQLSQ------FVHEVQKSPFGKQTRLVSLG--SRQNMCVNDDVRRLGNV 262
Query: 128 DSVDAAC--------RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
++ C K+ R E+ C F+ + V ++
Sbjct: 263 QLINDRCMEMQRNKHEKKNKEPERKKRQESR--AACPFYSYEQMQFLRDETLVEVKDIEQ 320
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKEMQKESVVVFDEA 236
L + ++ CPY+ +R+ + A VVV YQ LL K +GI K+ VV+ DEA
Sbjct: 321 LVSLAREVKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGI----KLKDQVVIIDEA 376
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA--- 293
HN+ + S V L A S++ Q ++R+++ RL+A+ V+ L
Sbjct: 377 HNLIDTITCMYSSQVSGAQLCQAH---SQLMQYMDRYRS----RLKAKNLMYVKQLVFLL 429
Query: 294 ------LRGNLPNAWLSNPALP------------SDILKEAVPGNIRRAEHFLHVLRRLV 335
+ GN+ NP+ +D L + NI + + R
Sbjct: 430 EKFVQVMGGNVKQ----NPSFQKVAQDGTTLKSINDFLFHSQIDNI----NLFKIQRYCT 481
Query: 336 QYLRGRLETENVEK-EGPVSFVASITAH-AGIDQKTLRFCYERLHSLMLTLEITDTDEFL 393
+ + R + VEK +G + +A+ + AG+ Q + H++ + E
Sbjct: 482 KSMISRKLSGFVEKFKGTETCLANKESQKAGLQQFLQDLSQKSRHTVGAPEGALEDAENG 541
Query: 394 HIQTICDFATLVGTYTRGFSIIIEPFDER-MPHIPDPVLQLSCH----DASLAVKPVFDR 448
++T + G + ++ D R + H+ V Q S + ++ V
Sbjct: 542 QLRTASPLMQIEGFLS---ALTNANQDGRVILHMQGTVAQSSLKFLMLNPAVHFAEVLKE 598
Query: 449 FQSVVITSGTLSPI-DLYPRLL---NFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
+SV+I GT+ P+ D +LL P + S + + I P+VL G +
Sbjct: 599 CRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVIPAENILPIVLCSGPTNQQL 658
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+ R P + G++L + + VP G+VCFF SY Y I W SG+LK +
Sbjct: 659 EFTYQKRDLPEMMDETGRILTNLCNFVPGGLVCFFPSYEYQKRIQEHWEKSGLLKRLALK 718
Query: 563 KLVFIE-------TQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRL 615
K +F E Q +VE + + N ++ GA+ FSV GK++EGI+F GR
Sbjct: 719 KKIFQEPKRANQVDQVLVEYSKCIKNCSQSGGAQNGALLFSVVGGKMSEGINFSDDLGRC 778
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIKEG--------DFLTFDALRQAAQCVGRVIR 667
++M G+P+ S L ++ YL T EG + L A+ Q+ +GR IR
Sbjct: 779 IVMVGMPYPNIRSPELQEKMSYLDKTLPKTEGVSAGRVLIENLCMKAVNQS---IGRAIR 835
Query: 668 SKADYGMMIFADKRYSRHDKRSKLPGWILS 697
+ DY ++ D RYSR KLP WI S
Sbjct: 836 HRGDYASIVLLDHRYSRPAILGKLPQWIRS 865
>gi|340518246|gb|EGR48488.1| predicted protein [Trichoderma reesei QM6a]
Length = 857
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 168/712 (23%), Positives = 289/712 (40%), Gaps = 103/712 (14%)
Query: 69 KLIYCTRTVHEMEKTLAELKLL--------HNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
++ Y +RT ++ + ++EL+ + + P + + LSSR+ LC+N
Sbjct: 188 RIYYTSRTHSQLSQFISELRRPAFPPSLPPSVAKASDVSPTEPVKLLPLSSRQKLCINPF 247
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + +++ C + + + + P E + +A A + ++DL
Sbjct: 248 VARLGSVQAINDRCAELQQAKSSSKCSFVPKEELLSQTHQFRDSALATI-----PDIEDL 302
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI- 239
GK CPY+ +R + A ++ Y LL + +++ +VV+ DEAHNI
Sbjct: 303 HHLGKSLSICPYYASRVALPGAEIITLPYPLLLQQSAREALGIKLEG-NVVIIDEAHNIL 361
Query: 240 ---DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
NV + +S R+ + + R ++++ + GR+ R+++GL+
Sbjct: 362 DAISNVHAAEIQLSDLRRGRQMLGVYVKRFGKKLKGINRVNVGRV----GRIIDGLS--- 414
Query: 297 NLPNAWLSNPALPSDILKE---AVPGNIRRAEHFLHV-LRRLVQYLRGRLETENVEKEGP 352
WL L E P ++ R + + + L+QY++ +E
Sbjct: 415 ----EWLEGALKFKVCLDEHGIVDPNDLTRHKGIDQMNIYELIQYIQESKLAYKIE---- 466
Query: 353 VSFVASITAHAGIDQ----KTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG-T 407
S+VA + A K L S ++ L ++ + Q + AT V T
Sbjct: 467 -SYVAHVEAEGDSSNSGPPKAATPVLHTLVSFLIALTNLSSEGRIFYQKVHGAATDVKLT 525
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
Y +++ P + A V ++V++ GT+SP Y
Sbjct: 526 Y-----LLLSP--------------------THAFSSVASSARAVILAGGTMSPFQDYKD 560
Query: 468 LL--NFHP--VVSRSFKMSLTRDCICPMVLTRGSD-QLPVSTKFDMRSDPGVARNYGKLL 522
L P V S S + + +C L + P F R + + G +
Sbjct: 561 QLFPTLEPGKVTSLSCGHVIPPENLCVWTLASSNPASPPFEFSFKQRGNREMMTQLGLAI 620
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHKLVFIET-----QD 571
+ + +IVPDG+V FF SY Y+DEI+ W + I + K VF ++ +D
Sbjct: 621 LNVCNIVPDGVVVFFPSYGYLDEIVKVWQQRQGESSQTIWDRLQARKSVFRDSKGESSED 680
Query: 572 VV-ETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
V+ + + A+ R A D GA+ SV GK++EGI+F GR V++ G+P+ S
Sbjct: 681 VLRDYSQAILGVRPAGDKRTGALLLSVVGGKMSEGINFSDRLGRCVMVVGLPYPNIASPD 740
Query: 631 LLARLEYLRDTFQ---IKEG---------------DFLTFDALRQAAQCVGRVIRSKADY 672
A+LEY+ T + +KEG DF +R Q +GR IR + DY
Sbjct: 741 WKAKLEYIESTTEARLVKEGRNSGEATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDY 800
Query: 673 GMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQ 724
+I D+RY R KLPGWI L + F RK +Q
Sbjct: 801 AAIILVDRRYGTDRIRGKLPGWIRDGLEKESHERGLGALMGALGAFFRKKSQ 852
>gi|307191862|gb|EFN75286.1| Probable ATP-dependent RNA helicase DDX11 [Harpegnathos saltator]
Length = 862
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 158/674 (23%), Positives = 291/674 (43%), Gaps = 83/674 (12%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAENR 127
K+ +C+RT ++ + + EL+ P ++ I + LSSR+N C+N V ++
Sbjct: 198 KIFFCSRTHSQLTQFVHELQR---------SPYSQDISVVPLSSRQNYCINKNVKKLKHV 248
Query: 128 DSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
++ C RK+T ++ C F +K A VL + ++++
Sbjct: 249 SLINETCLQLQRKKTTVKKEKDLKKSKTASGCPFIPGDQKLLMAEVLT-NIQDIEEIVQK 307
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G++ CPY+ +R VQ +++ Y +L + ++ KESV++ DEAHN+ +
Sbjct: 308 GQENNTCPYYGSRKSVQNGQLILVPYNSILHRNTRISLGIDL-KESVLIIDEAHNLLDA- 365
Query: 244 IEALSVSVRRQTLEGATRNL----SRINQEIERFKATDAGRLRAEYNRLVEGL------- 292
IE + SV + G RNL S+++Q ++F++ + + N+L L
Sbjct: 366 IEGMYSSV----ITG--RNLLHCYSQLSQYQKKFESLFSAKSVLFLNQLSFCLKKFLILF 419
Query: 293 -ALRGNLPNAWLSNPALPS-------DILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLET 344
A + PN ++ +P ++L E NI + F+ +LV L+G +E
Sbjct: 420 GATINSHPNDEVNKTIVPKLYKLEEFELLTEIDTVNIFKLLEFVKA-SKLVHKLQGFVEQ 478
Query: 345 ---------ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHI 395
+ V K G F+ SI + Q+ S+ + +
Sbjct: 479 YGNNVKIGEQKVMKSGITEFLNSIKNKDALSQEA--------SSVADAPNNNEEPMSNPL 530
Query: 396 QTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVIT 455
I F + + I + P I +++ + + + + +SVV+
Sbjct: 531 MAILSFLESLKSSCLDGRIYVLP----SATIGQGIIKFLLLNPAAHFHDIVEDARSVVLA 586
Query: 456 SGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLTRGSDQLPVSTKFDMR 509
GT+ P+ + L + M+ + D + P V+ RG + F R
Sbjct: 587 GGTMEPMSEFIDQLFLMAGATIDRIMTFSCDHVIPKENIISNVVMRGPTGIEFEFSFHNR 646
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
D + G+ L+ + +IVP G++ FF SY + D + + SG++ +I K ++ E
Sbjct: 647 QDTKLLDELGRTLINLCNIVPAGVIVFFPSYKFEDTVFKHLSKSGVISKISAKKCIYREP 706
Query: 570 QDVVETTLALDNY-------RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
+ + ++ LD Y + C+ G++ FSV GK++EG++F GR VI+ G+P
Sbjct: 707 KLASQVSVILDQYAHSIKNPQSPCN---GSLLFSVVGGKLSEGLNFSDDLGRCVIVVGLP 763
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
+ S L +++YL + + G F ++ QC+GR +R DY ++ DKR
Sbjct: 764 YPNIKSLELQEKMKYLNENVKPDAGSKFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKR 823
Query: 682 YSRHDKRSKLPGWI 695
Y K LP WI
Sbjct: 824 YCH--KIKVLPQWI 835
>gi|123491434|ref|XP_001325843.1| helicase [Trichomonas vaginalis G3]
gi|121908748|gb|EAY13620.1| helicase, putative [Trichomonas vaginalis G3]
Length = 747
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 164/709 (23%), Positives = 301/709 (42%), Gaps = 102/709 (14%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M + +V+++FPY YP Q +YM ++ + D + +LE PTGTGKT++LL + S+
Sbjct: 1 MDVNINEVSIHFPYKP-YPLQETYMSKVIESCDTGNYAILESPTGTGKTLSLLCSVLSWR 59
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ ++IY +RT ++ + ELK P I+A SR LC++
Sbjct: 60 QQR-NTSSRIIYSSRTHSQLSNVIKELK------RTKFQPTTSIIA----SRTYLCLH-- 106
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+N ++++ + R + R L +N I ++N K + + +L D+
Sbjct: 107 ----DNIQKMESSLQSR---FCRELRQKNQCI-----YDNESKIEQVS--KKVINSLLDI 152
Query: 181 RAF---GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+F + + CP+F+++ V+ A+ ++ Y Y+ DP + + +SVV+FDEAH
Sbjct: 153 DSFVDICRNEAVCPFFVSQFNVKTADFILSPYTYIADPISRSSLPSVVFNKSVVIFDEAH 212
Query: 238 NIDNVCIEALSVSVRRQTL----EGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA 293
N C E S+SV +R S + E+ F T + N + + L
Sbjct: 213 NFPEQCCEYFSMSVPFNKFCVLRSFLSRQQSNVIGEVVTFGITSVELAKEFSNLVCDKLE 272
Query: 294 -LRGNL-PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG 351
LR + N L N D + + R F +L+ + +
Sbjct: 273 LLRKEIHQNFVLKNAKFLFDFFSKC-KIDYRTIRPFKRLLKAFL--------------DN 317
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
PV + S +D L L+ D FL+ + + + + YT
Sbjct: 318 PVLYCLSQNEQESLD---------------LILQFFD---FLYHENKRNESLIDNFYTIS 359
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLN 470
S D + C A + + + +++++TSGTL+P++ +
Sbjct: 360 LST-------------DHCFNIYCFTPEKAFSEIVNLQPRTIILTSGTLAPLETFASYFG 406
Query: 471 FH-PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
+ P++ + ++ + + G +S + R+D L ++ S+
Sbjct: 407 YKFPIILENPHIAKPEQLLV-ICCGEGPFGNRLSFTYANRNDNQQKVELKSALSKLFSLS 465
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG 589
P+G + FF S+S + E + I K +FIE + + + + +++
Sbjct: 466 PNGSLVFFPSFSSLSEF--------DVHSIDTKKKIFIEPRTFGDFSSIVSQFKENAVKE 517
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF 649
GA F+V RGK++EGIDF Y R V + G+PF T ++ R ++ K+G
Sbjct: 518 EGAALFAVCRGKMSEGIDFSDDYARSVFVVGIPFPNTKDPKVILRKQFYESK---KKGSG 574
Query: 650 LTF---DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+ + A+R Q +GR IR K D+ +++ D RY + LP W+
Sbjct: 575 MKWYIDSAMRVVNQSIGRAIRHKDDWSVVVLIDNRYDGMIEL--LPKWV 621
>gi|431892148|gb|ELK02595.1| Putative ATP-dependent RNA helicase DDX11-like protein [Pteropus
alecto]
Length = 857
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 163/663 (24%), Positives = 270/663 (40%), Gaps = 108/663 (16%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V +
Sbjct: 240 TKIYYCSRTHSQL------TQFVHEVQKSPFGKDTRLVSLG--SRQNLCVNEDVKNLGSV 291
Query: 128 DSVDAAC----RKRTASWVRALAAENPNIE-----TCEFFENYEKAA--SAAVLPPGVYT 176
++ C R + S RA E C F+ NY++ VL V
Sbjct: 292 QLINDRCMEMQRSKHESKSRAEDKEPKRRRQEPRGACPFY-NYKQLQLLRDEVLVE-VKD 349
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++ L GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEA
Sbjct: 350 IEQLVTLGKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQ-VVIIDEA 408
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
HN+ + S V L A S++ Q +ER++ RL+A
Sbjct: 409 HNLIDTITSIHSAEVSGSQLCQAH---SQLLQYMERYRK----RLKAR------------ 449
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFV 356
N+ L+VL + V L G + K+ P +
Sbjct: 450 -----------------------NLMYIRQILYVLEKFVTVLGGNI------KQNPNTQS 480
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFA----TLVGTYTRGF 412
S T G + KT+ + + +I + + F +Q C+ + L G +T +
Sbjct: 481 LSQT---GTELKTI-------NDFLFQSQIDNINLF-KVQRYCEKSMVSRKLFG-FTERY 528
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH 472
++ P E+ P + L +A P + + SP+ L
Sbjct: 529 GAVLAPRKEQ-PKLAGFQHFLQSLQPGVAEAPAAPMEEEATVPRPA-SPLMHIEGFLAAL 586
Query: 473 PVVSRSFKMSLTR-------DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
++ ++ L+R D I P+++ G + + R P + G++L +
Sbjct: 587 TTANKDGRVILSRQGHVIPPDNILPLIICSGPSNQQLEFTYLKRELPQMMDEIGRILCNL 646
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA 585
++VP G+VCFF SY Y ++ A W+ SG+L + K +F E + + L Y +
Sbjct: 647 CNVVPGGVVCFFPSYEYQRQVHAHWDKSGLLARLAVRKKIFQEPKRANQVEQVLMEYSRC 706
Query: 586 CDCG-------RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL 638
C GA+ SV GK++EGI+F GR V+M G+P+ S L ++ YL
Sbjct: 707 IKCCAQVGGMVTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIGSPELQEKMAYL 766
Query: 639 RDTFQIKEGDFLTFDAL------RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
T G AL + Q +GR IR + D+ ++ D+RY+R +KLP
Sbjct: 767 DQTLPRTPGQAPPGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPILAKLP 826
Query: 693 GWI 695
WI
Sbjct: 827 AWI 829
>gi|195469691|ref|XP_002099770.1| GE16539 [Drosophila yakuba]
gi|194187294|gb|EDX00878.1| GE16539 [Drosophila yakuba]
Length = 859
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 176/707 (24%), Positives = 297/707 (42%), Gaps = 124/707 (17%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV----- 121
PV++ +C+RT ++ + +AEL+ +T H G A + +++G SR+ LC N +V
Sbjct: 187 PVQIFFCSRTHSQLAQIVAELR-----KTPH-GQAVRCISLG--SRQQLCGNPQVRRLKH 238
Query: 122 LAAENRDSVDAACRK-----RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+ N +D A +K S + A A + E+ A + L
Sbjct: 239 VGLMNERCLDMATKKARPNPSKKSRLSAEANSRCPFKAAPLVESLRDLALSEPL-----D 293
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
+++L + G G C Y+ +R V+ A +V+ YQ LL + + K S+V+ DEA
Sbjct: 294 IEELASEGAACGGCSYYASRSAVEHAQLVLLPYQLLLQKSARNQLGINL-KGSIVIVDEA 352
Query: 237 HNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQEI---------- 270
HN+ + + + RQ LE A T+NL +INQ I
Sbjct: 353 HNLLDSVAQLHGSEINRQQLERAKVQISGYKEHFQKRFSTKNLLKINQIIFIVRRLLKVL 412
Query: 271 ERFKATDAGR---------------------------LRAEYNRLVEGLALRGNLPNAWL 303
+R K T A R+ + R V+G A R +
Sbjct: 413 DRGKETQANSSSMMRTYELTAEGDFFNIDLCELLDFCARSRFARKVQGHADR-------M 465
Query: 304 SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHA 363
PS+ P + R+ +L+RL E + EK PV A +
Sbjct: 466 EREPRPSE---NQPPVSTARS----LILQRLAS------EQKQKEKPKPVKRKAEDS--- 509
Query: 364 GIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERM 423
++K F ++ E+T + I+ + F + + I+++P +
Sbjct: 510 --EEKAEEFQEQQKPPKKPVQEVTPSP----IRPLLAFLETLTSNAEDGRILLDPVGGTL 563
Query: 424 PHIP-DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNF--HPVVSRSF 479
+I DP Q + + + +++VI GT+ P +L +L +V +
Sbjct: 564 KYILLDPAEQFA---------DIVEEARAIVIAGGTMQPTQELKEQLFTSCQDRLVEHFY 614
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
+ D + P V++ G P+S +F R+ + + LL + +VP G+VCF S
Sbjct: 615 NHVVADDAVLPFVISNGPSGAPLSFQFAHRASAEMLQELSMLLRNLCQVVPGGVVCFLPS 674
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSV 597
Y Y+D++ SG L+ I K VF E E LDNY A GA+ SV
Sbjct: 675 YEYLDKVYTYLEQSGTLETIRGRKSVFREVSGSAEQL--LDNYALAIKKPASGGALLLSV 732
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALR 656
GK++EG++F GR V++ G+P+ S L R+++L + G ++ L+
Sbjct: 733 VGGKLSEGLNFADDLGRAVLVVGLPYANRQSPELRQRMQHLDEKLGPGAGNEYYENLCLK 792
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
QC+GR +R DY + DKR++ R KLP WI H+ +++
Sbjct: 793 AVNQCIGRAVRHIKDYACVYLLDKRFADPKIRGKLPKWISRHIVESN 839
>gi|332029639|gb|EGI69528.1| Putative ATP-dependent RNA helicase DDX11-like protein [Acromyrmex
echinatior]
Length = 857
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 154/677 (22%), Positives = 292/677 (43%), Gaps = 87/677 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-AAKILAIGLSSRKNLCVNSRVLAAEN 126
K+ +C+RT ++ + + ELK P + +I + LSSR+N C+N V ++
Sbjct: 190 TKIFFCSRTHSQLTQFVHELKR---------SPYSQEISVVPLSSRQNYCINKNVKRLKH 240
Query: 127 RDSVDAACRKRTASWVRALAAEN----PNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+ ++ C + ++ +C F +K A VL + ++++
Sbjct: 241 INLINETCLQLQKKKTTVKKEKDLKRSKTTSSCPFIPGDQKLLMAEVLT-NIQDIEEITQ 299
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++ CPY+ +R +Q +++ Y + + ++ K ++++ DEAHN+ +
Sbjct: 300 KGQENNTCPYYGSRKSLQNGQLILVPYNSIFHKNTRASLEIDL-KGNILIIDEAHNLLDA 358
Query: 243 CIEALSVSVRRQTLEGATRNL----SRINQEIERFKATDA-------GRLRAEYNRLVE- 290
IE + SV + G RNL S+++Q +RF++ + G+L +L+
Sbjct: 359 -IERMHSSV----ITG--RNLLHCYSQLSQYQKRFESLFSAKSVMYLGQLSFCLKKLLTL 411
Query: 291 -GLALRGNLPNAWLSNPALPS-------DILKEAVPGNIRRAEHFLHVLRRLVQYLRG-- 340
G ++ + PN + +P ++L E NI + F+ +L+ L+G
Sbjct: 412 FGATMKSH-PNDAIDKTIVPKLYKIEDFEMLIEIDTVNIFKLLEFIKT-SKLIHKLQGFV 469
Query: 341 -------RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFL 393
++ + +K G F+ SI + Q+T+ ++I+ +E
Sbjct: 470 EQYGNNIKINEQKTKKSGITEFLNSIKNNDVSSQETIS-----------VVDISSNNEEQ 518
Query: 394 H---IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQ 450
+ I F + I + P I +++ + + + +
Sbjct: 519 TSNPLMAILSFLECLKNSCADGRICVLP----STTIGQGIIKFLLLNPAAHFHDIVKDAR 574
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLTRGSDQLPVST 504
SVV+ GT+ P+ + L + M+ + D + P V+TRG +
Sbjct: 575 SVVLAGGTMEPMSEFVDQLFLMAGATSDRIMTFSCDHVIPKENIISNVITRGPTGIEFEF 634
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
+ R D + G+ L+ + ++VP GIV FF SY+Y D + + SG + +I K
Sbjct: 635 NYHNRQDTKLLDELGRALLNLCNVVPAGIVVFFPSYNYEDTVFKHLDKSGFISKISTKKC 694
Query: 565 VFIETQDVVETTLALDNYRKACD-----CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++ E + + LD Y + C GA+ FSV GK++EG++F GR VI+
Sbjct: 695 IYREPKLASQVNTILDQYAHSIKNPQFPCN-GALLFSVVGGKLSEGLNFSDDLGRCVIVV 753
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
G+P+ S L +++YL + + G+ F ++ QC+GR +R DY ++
Sbjct: 754 GLPYPNIKSPELQEKMKYLNENVKSDAGNSFYENSCMKAVNQCIGRSVRHINDYSTVVLL 813
Query: 679 DKRYSRHDKRSKLPGWI 695
DKRY K LP WI
Sbjct: 814 DKRYCH--KVKVLPQWI 828
>gi|443915597|gb|ELU36981.1| CHL1 helicase [Rhizoctonia solani AG-1 IA]
Length = 803
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 163/681 (23%), Positives = 289/681 (42%), Gaps = 107/681 (15%)
Query: 62 SKPENPV--KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNS 119
++PE P K+ Y +RT ++ + L EL+ H YQ+ A+ + +G SRKNLC+N
Sbjct: 166 TEPEEPTCTKIYYASRTHTQLSQFLGELRKTH-YQSN-----ARTVPLG--SRKNLCIND 217
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT--- 176
V + +D ACR ALA+E + + C + ++ A + + +
Sbjct: 218 DVKKGKYGADIDEACR--------ALASEK-DGKRCTYLPPPDEEAKMMDMRDHILSSPK 268
Query: 177 -LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD- 234
++DL G+Q CPY+ R ++ A V + PK A E + + FD
Sbjct: 269 DIEDLEGLGRQTATCPYYGTRRAIKQAEV--------ISPKDA----HERESGTRDRFDR 316
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY----NRLVE 290
++ I V +S ++ R + +++ +++ RL+ ++ RL
Sbjct: 317 SSYTILAVHTVPVSSTILRVS-----------KTQVDLYRSKFRNRLKTKHVVHLTRLSV 365
Query: 291 GLALRGNLPNAWLS-NPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN--- 346
LA AW + N + + G R + + + ++ L E N
Sbjct: 366 LLAALQKFTEAWANGNEDANENAKSDLSSGKKRPPQEEMFGVAEFIRMLGAHAENINPLE 425
Query: 347 VEKEGPV-----SFVASITAHAGIDQKTLRFCYER----------LHSLMLTLEITDTDE 391
+EKE + +A A +G + R R + SL+L L D D
Sbjct: 426 IEKESKIISGYSDKLADAAAASGTIRSPNRLANARRKGVTPPLHAIESLLLALANPDEDG 485
Query: 392 FLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQS 451
+ F G+ P L+ + S + V ++ +S
Sbjct: 486 RI-------FLNKTGS----------------PGAETVQLKYQLLNPSTHFREVVEKARS 522
Query: 452 VVITSGTLSPI----DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVST 504
VV+ GT+SP+ D + +L ++ P +V S + + I +VL +G +
Sbjct: 523 VVLAGGTMSPVIAIGDFHTQLFSYLPSDRLVVYSCGHVVPKSNIRTIVLGKGPRGKTLEF 582
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN--DSGILKEIMQH 562
KF R D + G+ ++ + ++VP+G V F SY+++ + W ++ IL+ + +
Sbjct: 583 KFGARGDEELIVELGQTVLNLTNLVPNGFVVFLPSYAFLSLVKTAWGKGENKILERLSKK 642
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIM 618
K +F E Q+ + L + GA+ F+V K++EG++F R V +
Sbjct: 643 KKIFYEPQENGDVESVLREFSATASSPTEGLTGAILFAVVGAKLSEGLNFSDGLARAVAI 702
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
G+PF S L AR++Y+R+ G + +R Q +GR IR + D+ ++F
Sbjct: 703 VGLPFANLGSAELQARMKYVRE-HASSSGVDAGKECMRATNQSIGRAIRHRGDWAAIVFI 761
Query: 679 DKRYSRHDKRSKLPGWILSHL 699
D+RY RSKLPGWI + L
Sbjct: 762 DQRYGTPRIRSKLPGWIGTDL 782
>gi|222630644|gb|EEE62776.1| hypothetical protein OsJ_17579 [Oryza sativa Japonica Group]
Length = 774
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 171/704 (24%), Positives = 287/704 (40%), Gaps = 116/704 (16%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + +RT ++ + + ELK +T ++ + L SRKNLC+N VL + +
Sbjct: 90 KVFFTSRTHSQLSQFVGELK-----KTEF---GWRLRTVCLGSRKNLCINKDVLKLGSAN 141
Query: 129 SVDAACRK-RTASWVRALAAENPNIETCEFF----------ENYEKAASAAVLPPGVYTL 177
++ C + + + E N + C+ +K + V G +
Sbjct: 142 RINERCLELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRKRGLQKEFKSEVSEQGALDI 201
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL GK+ G CPY+ AR MV+ A++VV YQ LL + + K SVV+ DEAH
Sbjct: 202 EDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNL-KNSVVIIDEAH 260
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
N+ + + + L LS + + RF++ L A R ++ L +
Sbjct: 261 NLADSLTSMYNSKITSSQLNAI---LSHLEAYLNRFQSV----LGAGNRRYIQTLTV--- 310
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLR-------RLVQYLRGRLETENVEKE 350
L ++L D +A FL L +L QY++ E+ + K
Sbjct: 311 LTRSFLRVLTSNQD---DACTMTSMTINQFLFSLDIDNINIVKLCQYVK---ESNIIHK- 363
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF-ATLVGTYT 409
V+ I+Q + ++ L + + QT+ DF +L+
Sbjct: 364 -----VSGYANKLNINQ-------DGVNHLSHQQQYDEGSSIASFQTLADFLRSLLNCND 411
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----L 464
G I+ P D L+ A + +V++ GTL PI+ L
Sbjct: 412 NGRIIVARKKFSGQPE--DAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRL 469
Query: 465 YPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLL 522
+P N P + F + + + I P+ +TRG + RS + G+ L
Sbjct: 470 FP---NLPPSDIKFFTCNHIVPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFL 526
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY 582
+V+ VP+G+V FF SY Y + W SG++ +I + K VF E ++ V+ + L+ Y
Sbjct: 527 CNVVTTVPEGVVMFFASYEYERFVYDAWAASGMISKISKKKHVFREPKNSVDVEMTLNKY 586
Query: 583 RKAC-DCGR--------GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA 633
++A C + GA+ +V GK++EGI+F GR V+M G+P+ L
Sbjct: 587 KEAIQSCSKSSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTE 646
Query: 634 RLEYLRDTFQ--IKEGDFLT-------------FDALRQA----------------AQCV 662
++Y+ + + + GD + FD LR+ Q +
Sbjct: 647 TIKYIENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSI 706
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKR-------SKLPGWILSHL 699
GR IR DY M+ D RY+ KLP WI + L
Sbjct: 707 GRAIRHANDYAAMLLVDSRYAHTSSNRSSSSPTDKLPQWIKTRL 750
>gi|125551293|gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indica Group]
Length = 877
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 171/704 (24%), Positives = 287/704 (40%), Gaps = 116/704 (16%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + +RT ++ + + ELK +T ++ + L SRKNLC+N VL + +
Sbjct: 193 KVFFTSRTHSQLSQFVGELK-----KTEF---GWRLRTVCLGSRKNLCINKDVLKLGSAN 244
Query: 129 SVDAACRK-RTASWVRALAAENPNIETCEFF----------ENYEKAASAAVLPPGVYTL 177
++ C + + + E N + C+ +K + V G +
Sbjct: 245 RINERCLELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRKRGLQKEFKSEVSEQGALDI 304
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL GK+ G CPY+ AR MV+ A++VV YQ LL + + K SVV+ DEAH
Sbjct: 305 EDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNL-KNSVVIIDEAH 363
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
N+ + + + L LS + + RF++ L A R ++ L +
Sbjct: 364 NLADSLTSMYNSKITSSQLNAI---LSHLEAYLNRFQSV----LGAGNRRYIQTLTV--- 413
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLR-------RLVQYLRGRLETENVEKE 350
L ++L D +A FL L +L QY++ E+ + K
Sbjct: 414 LTRSFLRVLTSNQD---DACTMTSMTINQFLFSLDIDNINIVKLCQYVK---ESNIIHK- 466
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF-ATLVGTYT 409
V+ I+Q + ++ L + + QT+ DF +L+
Sbjct: 467 -----VSGYANKLNINQ-------DGVNHLSHQQQYDEGSSIASFQTLADFLRSLLNCND 514
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----L 464
G I+ P D L+ A + +V++ GTL PI+ L
Sbjct: 515 NGRIIVARKKFSGQPE--DAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRL 572
Query: 465 YPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLL 522
+P N P + F + + + I P+ +TRG + RS + G+ L
Sbjct: 573 FP---NLPPSDIKFFTCNHIVPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFL 629
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY 582
+V+ VP+G+V FF SY Y + W SG++ +I + K VF E ++ V+ + L+ Y
Sbjct: 630 CNVVTTVPEGVVMFFASYEYERFVYDAWAASGMISKISKKKHVFREPKNSVDVEMTLNKY 689
Query: 583 RKAC-DCGR--------GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA 633
++A C + GA+ +V GK++EGI+F GR V+M G+P+ L
Sbjct: 690 KEAIQSCSKSSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTE 749
Query: 634 RLEYLRDTFQ--IKEGDFLT-------------FDALRQA----------------AQCV 662
++Y+ + + + GD + FD LR+ Q +
Sbjct: 750 TIKYIENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSI 809
Query: 663 GRVIRSKADYGMMIFADKRYSR-------HDKRSKLPGWILSHL 699
GR IR DY M+ D RY+ KLP WI + L
Sbjct: 810 GRAIRHANDYAAMLLVDSRYAHTSSNRSSSSPTDKLPQWIKTRL 853
>gi|46981234|gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group]
Length = 845
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 171/704 (24%), Positives = 287/704 (40%), Gaps = 116/704 (16%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + +RT ++ + + ELK +T ++ + L SRKNLC+N VL + +
Sbjct: 161 KVFFTSRTHSQLSQFVGELK-----KTEF---GWRLRTVCLGSRKNLCINKDVLKLGSAN 212
Query: 129 SVDAACRK-RTASWVRALAAENPNIETCEFF----------ENYEKAASAAVLPPGVYTL 177
++ C + + + E N + C+ +K + V G +
Sbjct: 213 RINERCLELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRKRGLQKEFKSEVSEQGALDI 272
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL GK+ G CPY+ AR MV+ A++VV YQ LL + + K SVV+ DEAH
Sbjct: 273 EDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNL-KNSVVIIDEAH 331
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
N+ + + + L LS + + RF++ L A R ++ L +
Sbjct: 332 NLADSLTSMYNSKITSSQLNAI---LSHLEAYLNRFQSV----LGAGNRRYIQTLTV--- 381
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLR-------RLVQYLRGRLETENVEKE 350
L ++L D +A FL L +L QY++ E+ + K
Sbjct: 382 LTRSFLRVLTSNQD---DACTMTSMTINQFLFSLDIDNINIVKLCQYVK---ESNIIHK- 434
Query: 351 GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDF-ATLVGTYT 409
V+ I+Q + ++ L + + QT+ DF +L+
Sbjct: 435 -----VSGYANKLNINQ-------DGVNHLSHQQQYDEGSSIASFQTLADFLRSLLNCND 482
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID-----L 464
G I+ P D L+ A + +V++ GTL PI+ L
Sbjct: 483 NGRIIVARKKFSGQPE--DAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRL 540
Query: 465 YPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLL 522
+P N P + F + + + I P+ +TRG + RS + G+ L
Sbjct: 541 FP---NLPPSDIKFFTCNHIVPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFL 597
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY 582
+V+ VP+G+V FF SY Y + W SG++ +I + K VF E ++ V+ + L+ Y
Sbjct: 598 CNVVTTVPEGVVMFFASYEYERFVYDAWAASGMISKISKKKHVFREPKNSVDVEMTLNKY 657
Query: 583 RKAC-DCGR--------GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA 633
++A C + GA+ +V GK++EGI+F GR V+M G+P+ L
Sbjct: 658 KEAIQSCSKSSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTE 717
Query: 634 RLEYLRDTFQ--IKEGDFLT-------------FDALRQA----------------AQCV 662
++Y+ + + + GD + FD LR+ Q +
Sbjct: 718 TIKYIENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSI 777
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKR-------SKLPGWILSHL 699
GR IR DY M+ D RY+ KLP WI + L
Sbjct: 778 GRAIRHANDYAAMLLVDSRYAHTSSNRSSSSPTDKLPQWIKTRL 821
>gi|270006398|gb|EFA02846.1| regulator of telomere elongation helicase 1 [Tribolium castaneum]
Length = 1338
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 146/280 (52%), Gaps = 8/280 (2%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C A+ + DR V++TSGTL+P+ L V + D +
Sbjct: 999 VLNFWCFSPGFAMNMLMDRNIHCVILTSGTLAPLKPLISELELEIGVRIENPHIVKGDQV 1058
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
C +L++G D P+++ F+ RS+P ++ G ++ ++ ++PDG++ FF SY M + I
Sbjct: 1059 CVKILSKGPDMEPLNSNFENRSNPKYLQSLGLVISNLIRVIPDGVLIFFPSYVIMQKTIE 1118
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDN-YRKACDCG-RGAVFFSVARGKVAEGI 606
W + G I + K ++IE +D +E A+ Y K D GA+F V RGKV+EG+
Sbjct: 1119 HWQNDGTWDSINRTKPIYIEPKDKIEFATAMSEYYAKIQDPSYSGAIFMGVCRGKVSEGL 1178
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQC 661
DF GR V + G+P+ ++ + +YL ++ +K D+ + +A R Q
Sbjct: 1179 DFADINGRAVFITGLPYPPLKDPKIILKKQYLDFRYSKNKEYLKGDDWYSLEATRAINQA 1238
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
+GRVIR K+DYG +I D R++ ++ L W+ H+ D
Sbjct: 1239 IGRVIRHKSDYGAIILLDSRFTNPRIKNNLSLWLRQHITD 1278
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 141/279 (50%), Gaps = 8/279 (2%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C + + D+ V++TSGTL+P+ L + V + D +
Sbjct: 195 VLSYWCFSPGFGMNMLLDQGVHCVILTSGTLAPLKPLISELELNVGVRIENPHIVKGDQV 254
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
C +LT+G D P++ + R +P + G++++ ++ I+P G++ FF SY M +
Sbjct: 255 CVKILTKGPDGEPLNCNYQNRDNPNYLMSLGQVVLNLIRIIPHGVLIFFPSYPIMQKCQQ 314
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDN-YRKACDCG-RGAVFFSVARGKVAEGI 606
W +SGI I + K +F+E +D T A+ Y K D +GA+F V RGKV+EG+
Sbjct: 315 YWQESGIWDGINKIKAIFVEPKDKNSFTFAMSEYYSKVKDPNYKGAIFMGVCRGKVSEGL 374
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQC 661
DF GR V + G+P+ ++ + YL +D +K D+ + +A R Q
Sbjct: 375 DFADSNGRAVFIIGLPYPPLKDPKIILKKRYLDVCNAKDKEYLKGDDWYSLEATRAINQA 434
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+GRVIR K DYG +I D R++ + L W+ H++
Sbjct: 435 IGRVIRHKNDYGAIILLDSRFTNPRIQGNLSLWLKKHIK 473
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 35/214 (16%)
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
S P ++IY +RT ++ + + E+K HL A L SR +C++ V
Sbjct: 665 SPPITLPRIIYASRTHTQLSQAMQEMK---RTAYNHLK------ACVLGSRDQMCIDPEV 715
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP----GVYTL 177
+ +N CR + + C++++ E+A+ +PP + +
Sbjct: 716 IQEKNASFKVNLCRAKVKR------------KQCKYYQRIERASH---VPPVSDLNIIDI 760
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE---SVVVFD 234
+D+ G++ +CPY +AR + ++VV Y YLLDP+ SK M E ++++FD
Sbjct: 761 EDVVKLGRECDFCPYHMARELKNRSDVVFMPYNYLLDPRT----SKNMDVEIFGNIIIFD 816
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
EAHNI+ +C +++SV ++ ++ A ++ +N+
Sbjct: 817 EAHNIEKICEDSVSVQIKSSDVDSAVEDVESVNE 850
>gi|91080377|ref|XP_975038.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 750
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 146/280 (52%), Gaps = 8/280 (2%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C A+ + DR V++TSGTL+P+ L V + D +
Sbjct: 411 VLNFWCFSPGFAMNMLMDRNIHCVILTSGTLAPLKPLISELELEIGVRIENPHIVKGDQV 470
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
C +L++G D P+++ F+ RS+P ++ G ++ ++ ++PDG++ FF SY M + I
Sbjct: 471 CVKILSKGPDMEPLNSNFENRSNPKYLQSLGLVISNLIRVIPDGVLIFFPSYVIMQKTIE 530
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDN-YRKACDCG-RGAVFFSVARGKVAEGI 606
W + G I + K ++IE +D +E A+ Y K D GA+F V RGKV+EG+
Sbjct: 531 HWQNDGTWDSINRTKPIYIEPKDKIEFATAMSEYYAKIQDPSYSGAIFMGVCRGKVSEGL 590
Query: 607 DFDRHYGRLVIMFGVPF-QYTLSKILLAR----LEYLRDTFQIKEGDFLTFDALRQAAQC 661
DF GR V + G+P+ KI+L + Y ++ +K D+ + +A R Q
Sbjct: 591 DFADINGRAVFITGLPYPPLKDPKIILKKQYLDFRYSKNKEYLKGDDWYSLEATRAINQA 650
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
+GRVIR K+DYG +I D R++ ++ L W+ H+ D
Sbjct: 651 IGRVIRHKSDYGAIILLDSRFTNPRIKNNLSLWLRQHITD 690
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 141/283 (49%), Gaps = 51/283 (18%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPEN- 66
V V FP+ Y Q YM ++ L+ + + +LE PTGTGKT++LL +++ ++ E
Sbjct: 9 VPVKFPFAP-YDIQTKYMEKVIDCLENRQNGILESPTGTGKTLSLLCASLAWLEARREKF 67
Query: 67 -----------PV---KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSR 112
P+ ++IY +RT ++ + + E+K HL A L SR
Sbjct: 68 AAQPKKCDDSPPITLPRIIYASRTHTQLSQAMQEMK---RTAYNHLK------ACVLGSR 118
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP 172
+C++ V+ +N CR + + C++++ E+A+ +PP
Sbjct: 119 DQMCIDPEVIQEKNASFKVNLCRAKVKR------------KQCKYYQRIERASH---VPP 163
Query: 173 ----GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
+ ++D+ G++ +CPY +AR + ++VV Y YLLDP+ SK M E
Sbjct: 164 VSDLNIIDIEDVVKLGRECDFCPYHMARELKNRSDVVFMPYNYLLDPRT----SKNMDVE 219
Query: 229 ---SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
++++FDEAHNI+ +C +++SV ++ ++ A ++ +N+
Sbjct: 220 IFGNIIIFDEAHNIEKICEDSVSVQIKSSDVDSAVEDVESVNE 262
>gi|164657658|ref|XP_001729955.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
gi|159103849|gb|EDP42741.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
Length = 891
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 163/689 (23%), Positives = 293/689 (42%), Gaps = 102/689 (14%)
Query: 64 PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNS---R 120
PE K+ Y +RT ++ + + E+K + R + +I L SRK++C+++ R
Sbjct: 230 PETRPKIFYASRTHSQLAQLINEVKRTPFGKARE-----PVRSISLGSRKHMCLHADVRR 284
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAV------LPPGV 174
V A D+++ C + +N + C F ++ + V
Sbjct: 285 VGATSGTDAMNERCLE---------LIQNKKGQRCPFLPPHDAMGQVTMDRYRDHALAQV 335
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLL--DPKVAGIISKEMQKESVVV 232
+ +++L GK CPYF RH + A +V Y LL D + A +S E ES+++
Sbjct: 336 HDIEELVQLGKDLRICPYFGTRHSARNAELVTLPYNLLLQHDAREALQLSLE---ESILL 392
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
DEAHN+ + + + + + ++ AT ++++ ++RF G + E+ R+++ +
Sbjct: 393 IDEAHNLIDTILATYTTELTQAHIDEAT---AQVDVYLQRFSKRLKG-VNEEHIRILQVI 448
Query: 293 --ALRG-------NLPNAW-----LSNPALPSDILKEAVPGNIRRAEHFL---HVLRRLV 335
A++ N + W L+ PA + + N+ R E +L + R++
Sbjct: 449 LHAMQSFCAEICKNKQHMWQRDTSLTLPAFMAHLGGSVDQINLVRLERWLKDTRIARKIG 508
Query: 336 QYLRGRLE----TENVEKEGPVSFVASIT-AHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
Y E +EN P + + +T A ++ L C ++ +L ++
Sbjct: 509 GYANKVWERAQTSENPSTWRPATRPSCMTRAMHSLEAFLLALCNRSMNGCILV-----SN 563
Query: 391 EFLHIQTICDFATLVGTYTRGFS---IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFD 447
E + I T + G +++ P D A +P+
Sbjct: 564 E----RAISGGRGTDNTVSGGVRFKYLLLHPGD--------------------AFEPLVA 599
Query: 448 RFQSVVITSGTLSPI-DLYPRLLNFHPVVSRSF---KMSLTRDCICPMVLTRGSDQLPVS 503
+++V+T GT+ PI D +L + P S + RD + V+ G +
Sbjct: 600 DARAIVLTGGTMEPISDFRTQLFSNLPDERLSLFSCGHIVPRDHVLGAVVPVGPKGHTLE 659
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
+ P + G +L +IVP G+V FF SY+ +D +A W +G+L + + K
Sbjct: 660 FTHEAWQRPCLLDELGNVLSNYSNIVPHGMVVFFPSYASLDMTVAQWRKTGMLDRLSKRK 719
Query: 564 LVFIETQDVVETTLALDNYRKACD-----CGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
VF+E +D + L Y +GA+ +V K++EGI+F R V+M
Sbjct: 720 QVFMEPKDAKDVDTILRQYASTVSTPPPTSPKGAMLLAVVGAKLSEGINFQDELARCVVM 779
Query: 619 FGVPFQYTLSKILLARLEYLRDT------FQIKEG-DFLTFDALRQAAQCVGRVIRSKAD 671
G+PF ++ S L RL + R T G D +R Q +GR IR AD
Sbjct: 780 VGLPFPHSQSPELAERLAFARSTQPPDTRSSTDPGRDLYVNMCMRAVNQSMGRAIRHSAD 839
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Y + + D+RY R +LPGWI + ++
Sbjct: 840 YAVFLMLDQRYGRDSILMRLPGWIRTQVQ 868
>gi|123493892|ref|XP_001326390.1| helicase [Trichomonas vaginalis G3]
gi|121909304|gb|EAY14167.1| helicase, putative [Trichomonas vaginalis G3]
Length = 717
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 166/755 (21%), Positives = 317/755 (41%), Gaps = 121/755 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+++ + F Y Q + ++ +A E PTGTGK++++L+ +++ K
Sbjct: 7 IQNAKLKFGATKPYSIQTEFATDMIKAFQENKIGFFESPTGTGKSMSVLTSSLAFIQEKN 66
Query: 65 ENPV------------------------KLIYCTRTVHEMEKTLAELK---LLHNYQTRH 97
++ KLI CTRT ++++ + ELK LL +R
Sbjct: 67 KDIADSYAYGTDNDDIADILYANKPKRSKLIVCTRTHSQIKELVNELKRPSLLRYKDSRR 126
Query: 98 LGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEF 157
I L+SR+ LC+N V A + ++ C+K +C++
Sbjct: 127 T-----TRCISLASRRFLCIND-VYANYSGSELNNVCKK-----------------SCDY 163
Query: 158 FENYE--KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP 215
++N++ KA + + ++DL +FG+ +CPYF +R ++F++V++ YQ L
Sbjct: 164 YKNFKDRKADILKKISTEPHDIEDLMSFGRAGIFCPYFASRATIRFSDVILMPYQTLFQQ 223
Query: 216 KVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRR-QTLEGATRNLSRINQEIERFK 274
+ + ++ +V+ DE HN+ + S+S+ + + + G T L ++ + K
Sbjct: 224 QTLESLKIDISNAYIVI-DEGHNLVDALNSMYSISLTKAEDITGVTNGLKEFQMKLTKVK 282
Query: 275 ---ATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNI----RRAEHF 327
+ D +L + + E P + LK+ + N+ R A
Sbjct: 283 GPISEDPSKLEDDKKPVEE-----------------TPQNQLKKEIMMNMSTLNRIATGI 325
Query: 328 LHVLRRLVQ-YLRGRLETENVEKEGPVSFVASITAHAGIDQKTL--RFCYERLHSLMLTL 384
+ V+ ++ + L +E + ++ + + + +K+L R C ++ L+
Sbjct: 326 ISVMNKVAKGQLPKVMEMNDFQESSGLRNINPFILLDFVHEKSLVYRICGKKEEKERLS- 384
Query: 385 EITDTDEFLHIQTICDFATLVGTYTR-GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
T F + + F +G + G I+ E M P SL
Sbjct: 385 ---STTAF---RKLLQFVEAMGNPDKYGRVIVTENSVSYMLLNP-----------SLVFA 427
Query: 444 PVFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSRSFKMSLTRDCICP-----MVLTRGS 497
V +SV + GTL P DL +L++ + + + I L G
Sbjct: 428 QVAKTAKSVCLVGGTLQPFSDLTAQLIDQNSIPEDRIFTHVNGHVILAENALTFCLHTGP 487
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
++ + ++ R + + G+ +E+ +VP GI+ FF S+ +++ +
Sbjct: 488 NKEKLGFTYETRQNERLFDEIGQSCLELSCVVPGGIIYFFTSFDILNKAYKYIETKSYKE 547
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCGRG----AVFFSVARGKVAEGIDFDRHYG 613
+I HK + ETQ+ + + ++ D RG AV F+V GK++EGI+F Y
Sbjct: 548 KIENHKFILKETQNPNDLDKLMRTFKSHIDKQRGDFTGAVLFAVMNGKLSEGINFANDYC 607
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-------DFLTFDALRQAAQCVGRVI 666
R V+ G+PF + R+++ D Q K+G F+ +R Q +GR
Sbjct: 608 RCVVCVGMPFSNMNDMQISERMKFF-DQMQ-KDGISSCGGRQFVENTCMRIVNQSIGRSF 665
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
R+ DY + I D+RY+ H + LPGWI + +D
Sbjct: 666 RNIKDYAVAILFDERYNDH--KQLLPGWIQRNYQD 698
>gi|320591639|gb|EFX04078.1| dead domain containing protein [Grosmannia clavigera kw1407]
Length = 911
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 176/710 (24%), Positives = 287/710 (40%), Gaps = 136/710 (19%)
Query: 68 VKLIYCTRTVHEMEKTLAELKL-----------LHNYQTRHLGPAA---KILAIGLSSRK 113
VK+ Y +RT ++ + +AEL+ + + + AA I I LSSR+
Sbjct: 252 VKIYYASRTHSQLTQFIAELRRPTFPSSLPDFSQPDKEIDGVAAAAVDEPIRHIPLSSRQ 311
Query: 114 NLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE--------KAA 165
LC+N V + +++ C + + + I C F + E + A
Sbjct: 312 RLCINPAVARLGSVGAINDRCAELQKPKKKTKTDDGKKIPGCPFAPSAENRVAERQFRDA 371
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF---ANVVVYSYQYLLDPKVAGIIS 222
+ A LP ++DL G + CPY+ +R + A +V Y LL +
Sbjct: 372 ALATLP----DIEDLFRLGTELHVCPYYGSRRAAEAGGGAEIVTLPYPLLLHKAAREALG 427
Query: 223 KEMQKESVVVFDEAHNIDNVCIEA-----LSVSVRRQTLEGATRNLSRINQEIERFKATD 277
++ SVV+ DEAHNI + L+V VRR R D
Sbjct: 428 IRLEN-SVVIVDEAHNIMDAVAGVHAAALLAVYVRR----------------FGRRLRGD 470
Query: 278 AGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY 337
+ + R+++GL +AW+ A ++ + LVQY
Sbjct: 471 GRVMVGQLGRVIQGL-------SAWMEGGADQINLFE-------------------LVQY 504
Query: 338 LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
++ VE S+ A + A +QK + + ++ LH T
Sbjct: 505 IQTSKLAFKVE-----SYGAYVEEEAEKNQKVQKTENDAHNA--------HNPPVLH--T 549
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHI-----PDPVLQLSCHDASLAVKPVFDRFQSV 452
+ F L T G I F ER+P + PD L + A + ++V
Sbjct: 550 LVSF-LLALTNLSGEGRI---FYERLPLVSPGAAPDVKLSYLLLSPTHAFSSIAASARAV 605
Query: 453 VITSGTLSPIDLYP-RLLNFHP-----VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
++ GT++P Y L H +S + + C+ + S P+ F
Sbjct: 606 ILAGGTMAPFSDYRCHLFPSHAPERITTLSCGHVIPPSNLCVWTLAFISPSSP-PLDFSF 664
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG-----ILKEIMQ 561
RS R+ G ++ + ++VPDG+V FF SY Y+DE++A W +G + +
Sbjct: 665 QKRSLAQTIRDLGAAMLNLCAVVPDGVVVFFPSYGYLDEVVAAWKTAGPGATSLWDRLCA 724
Query: 562 HKLVFIETQDVVETTLALDNYRKAC----DCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
K VF+ET+ + L +Y +A +GA+ FSV GK++EGI+F GR V+
Sbjct: 725 RKTVFLETRGAASSDDVLADYSRAILGEEPKSQGALLFSVVGGKMSEGINFADRLGRCVV 784
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQ---------------IKEGDFLTFDALRQAAQCV 662
+ G+PF + AR++Y+ T + + DF +R Q +
Sbjct: 785 IVGLPFPNPHAPDWKARMQYIEATARDANSNSSDSTSLSPAQQARDFYENACMRAVNQSI 844
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
GR IR +ADY +I AD R++ R+KLP WI RD + S D L
Sbjct: 845 GRAIRHRADYAAIILADHRFATPRIRNKLPAWI----RDGMVAASEDRGL 890
>gi|429854790|gb|ELA29777.1| ATP-dependent RNA helicase chl1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 858
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 180/717 (25%), Positives = 289/717 (40%), Gaps = 127/717 (17%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-------------ILAIGL 109
K E+ VK+ Y +RT ++ + + EL+ + P+ K + + L
Sbjct: 170 KVEDGVKIYYTSRTHSQLTQFIHELR--RPAFPSSMPPSVKPNDSEDARPDKEPVKHLPL 227
Query: 110 SSRKNLCVNSRVLAAENRDSVDAAC---RKRTASWVRALAAENPNIETCEFFENYEKAAS 166
SSR+ LC+N V +++ C +K A NI+ F + +
Sbjct: 228 SSRQKLCINPSVAKLGTISAINDRCSELQKPKAKDKCPYTLNEDNIKQTHQFRD----TA 283
Query: 167 AAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226
A LP ++DL GK+ CPY+ +R + A ++ Y LL + +++
Sbjct: 284 HATLP----DIEDLYHLGKKLEVCPYYASRAAIAGAEIITLPYPLLLQKNARDALGIKLE 339
Query: 227 KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---A 283
+VV+ DEAHNI + + ++ L A + L ++RF G R
Sbjct: 340 G-NVVIVDEAHNIMDAVANVYASEIKLTELRRARQMLGVY---VKRFGKKLKGENRVMVG 395
Query: 284 EYNRLVEGLALRGNLPNAWLSNP---ALPSDILKEAVPGNIRRAEHFLHV-LRRLVQYLR 339
+ R++EGL W+S P I+ V + R + + L +L+QY++
Sbjct: 396 QVGRVIEGL-------TEWMSGAMTLKAPHGIVDSKV---LLRCKGVDQINLFKLIQYIQ 445
Query: 340 GRLETENVEK-EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTI 398
E++ K E V+ V A A + R LH L FL
Sbjct: 446 ---ESKLAYKIESYVAHVEEEIAQANAGKAPPRSSTPVLHIL---------SSFL----- 488
Query: 399 CDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGT 458
+L + G I E P I L LS + A + ++V++ GT
Sbjct: 489 ---ISLTNLSSEG-RIFYEKTSSNSPDIQLSYLLLS---PTHAFSSIATSARAVILAGGT 541
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLT--------RDCICPMVLTRGSDQLPVSTKFDM-- 508
+SP + Y L P +S S +L+ C+ + T+ VS+ F+
Sbjct: 542 MSPFEDYKDHL--FPYLSDSKLTTLSCGHVIPPSNLCVWTLAGTKPGPNRDVSSTFEFSF 599
Query: 509 --RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIM 560
RSD + G ++ + ++VPDG+V FF SY Y+DE++A W I +
Sbjct: 600 QRRSDKTMVSQLGLAILNICNVVPDGVVVFFPSYGYLDEVVAVWETKSPGESKSIWDRMR 659
Query: 561 QHKLVFIETQDVVETTLALDNYRKAC-----DCG------RGAVFFSVARGKVAEGIDFD 609
+ K F ET+ + L+ Y KA C RGA+ SV GK++EGI+F
Sbjct: 660 ERKEAFKETRGGSSDEV-LEAYSKAILGDGEPCAGAAPKPRGAILLSVVGGKMSEGINFS 718
Query: 610 RHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF----------------------QIKEG 647
GR VI+ G+P+ S A+ EY+ T +
Sbjct: 719 DRLGRCVIIIGLPYPNINSPEWKAKTEYIETTTVQRLTDASASTRISREEAIVVAKQAAR 778
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL-RDAH 703
DF +R Q +GR IR + DY ++ D+RY R KLPGWI + D+H
Sbjct: 779 DFYENACMRAVNQSIGRAIRHQGDYAAIVLVDRRYGTDRIRGKLPGWIRGGMNNDSH 835
>gi|14521544|ref|NP_127020.1| DNA repair helicase rad3 [Pyrococcus abyssi GE5]
gi|5458763|emb|CAB50250.1| ERCC2/XPD/rad3 DNA repair helicase, TFIIH helicase beta subunit
homolog [Pyrococcus abyssi GE5]
gi|380742154|tpe|CCE70788.1| TPA: DNA repair helicase rad3 [Pyrococcus abyssi GE5]
Length = 637
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 178/719 (24%), Positives = 314/719 (43%), Gaps = 121/719 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGH-CLLEMPTGTGKTIALLSLITSYVLSKPENPVK 69
YFPY + P Q + +EL R + +G ++E PTG GKTI++L+ + + +S K
Sbjct: 4 YFPYKTLRPHQDEF-IELVRDVVKRGEKVIIEAPTGFGKTISVLAGVLPHAIS---FGYK 59
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNS--RVLAAENR 127
+IY RT +M++ + ELK + AK+ I SRK+LC++S R A +
Sbjct: 60 VIYLARTHKQMDRVIEELKRIRE--------IAKVSGIEFRSRKDLCLHSYIRTFAQDAY 111
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFENYE------KAASAAVLPPGVYTLQDLR 181
S+ C+ + C++FEN + K L Y + +
Sbjct: 112 TSM-IVCKSLK------------RLGKCKYFENLKEKRDKVKEIVEFFLENPSYPWEVIE 158
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES---VVVFDEAHN 238
+ CPY + R + + ANV+V SY Y+++P + + E +V+FDEAHN
Sbjct: 159 -YSNLLELCPYEVTRKVGEKANVIVASYLYMVNPWIRQAFLDGLGLEYSDLIVIFDEAHN 217
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
+ + I ALS + + R++ R +E + D + + R +E + + L
Sbjct: 218 LPDQAISALSDRL-------SIRSVERAIKEANEYGEKDIENFLSIFLRGLE-IIYKEKL 269
Query: 299 PNAWLSN-PALPSDILKEAVPGNIRRAEHFLHVL----RRLVQYLRGRLETENVEKEGPV 353
N +S P P+ I EH +L R L+++L+ +E + +E +
Sbjct: 270 ENYEISEVPLSPASIF-----------EHVSSILGLRERDLLRFLQEMVEVGDAIREDKI 318
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
++ G + F + + + D ++LH V T +G +
Sbjct: 319 ERNLPPRSYVG---RVGEFLWN-------WISLADRSDYLH----------VFTREKGLA 358
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
L++ D S+A++ + D S ++ SGTLSP++ + ++ +
Sbjct: 359 -----------------LEIVALDPSVALEFLED-VHSAILMSGTLSPLEAFRDIIGVNA 400
Query: 474 VVSRSFKMSLTRDCICPM---VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
+ + +M + + I + V TRG ++ PV + + + + E V I+P
Sbjct: 401 RLKKFPRMVKSENAIVLVARDVSTRGEERSPV-----------LYKKLAEYIFEAVKIIP 449
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVET-TLALDNYRKACDCG 589
+ F SY ++ +I+T I +EI K VFIE +D + AL KA G
Sbjct: 450 KNVGVFTASYEVLEGLISTNVHIRIEEEI--GKKVFIEKRDASSSENDALVAEFKAEAKG 507
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF 649
G V F V G+ +EG D+ VI+ G+P+ ++ A++ Y F K G +
Sbjct: 508 NGGVLFGVMGGRNSEGQDYSGDEMNGVILVGIPYARPTPRV-QAQIRYYEKKFPGK-GRY 565
Query: 650 LTF--DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNL 706
+ A R+ AQ GRV RS+ + G ++ D R + + LP W++ ++ L L
Sbjct: 566 YGYLLPAHRKLAQAAGRVHRSEEEKGSIVILDYRVLWNTVKRDLPDWMVETMQPVTLPL 624
>gi|68472519|ref|XP_719578.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
gi|68472770|ref|XP_719450.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|74586763|sp|Q5AD67.1|CHL1_CANAL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|46441268|gb|EAL00566.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|46441401|gb|EAL00698.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
Length = 842
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 159/670 (23%), Positives = 291/670 (43%), Gaps = 95/670 (14%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P+K+ + +RT ++ + ++L+L N+Q + I L SRK LC+N +V +
Sbjct: 198 ECPIKIFFSSRTHSQLNQFSSQLRLT-NFQASFEDLEERTKYIPLGSRKQLCINEKVRSK 256
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFF-ENYEKAAS----AAVLPPGVYTLQD 179
N SV+ AC L E C++ +NY ++ A + + ++D
Sbjct: 257 GNDQSVNDACLD--------LQRE---TNGCQYLPKNYMMSSVTKEFADLSLAKIRDIED 305
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G + CPY+ R ++ ++ YQ + I++ +++ +++ DEAHNI
Sbjct: 306 LNELGIELNICPYYSVRKGIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIII-DEAHNI 364
Query: 240 DNVCIEALSVSVRRQTLEGATRNLS-RINQEIERFKATDAGRLRAEYNRLVEGLA----- 293
+V S+ + L ++L +N+ ++R + + R +L++
Sbjct: 365 IDVITSMYSIKITSDQLNKVIKSLKIYLNKFLKRLNSGN----RINLMKLIKICQILLKF 420
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPG--NIRRAEHFL---HVLRRLVQYL-RGRLETENV 347
L N + DI K++ NI + + FL + ++ Y+ + +ET+N
Sbjct: 421 LNTNSEKVKSGDEVQIQDIFKDSTGDLVNIHKLDQFLTKSKIAYKIESYIEKTEMETDNG 480
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
EK+G ++ ++ + L + L +L ++ +F + GT
Sbjct: 481 EKKGRITNSGGSSSSSSSSNPLLFTIIKFLRTLT---NLSKEGKFF-------WDNENGT 530
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
+ + ++ D S K + D+ + V++ GT+ P+ Y
Sbjct: 531 ISLNYMLL---------------------DPSAVFKEIVDQAKCVLLCGGTMEPMSDYMD 569
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-PVS----TKFDM----RSDPGVARNY 518
L F V + C V+ + + Q+ P+S T F+ R+D
Sbjct: 570 YL-FPSVPTNKINT-----FACGHVIPKENLQVFPISQWNDTNFEFSYQKRNDSKQLMAL 623
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G+ L+E+ VP G+V FF SY Y+D+++ W D+ IL I K +F E +D
Sbjct: 624 GEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRDTKILTSIESEKTIFREPKDPSNVEKV 683
Query: 579 LDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
L+ Y R GA+ FSV GK++EGI+F R VIM G+P+ S ++ + +Y
Sbjct: 684 LNEYGYLIQTERKGAILFSVVGGKMSEGINFSDDLARAVIMVGLPYPNAYSGEMVTKRKY 743
Query: 638 LRDTFQIKEGDFLTFDA------------LRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
+ +T ++ G T DA +R Q +GR IR DY ++ D+R+S
Sbjct: 744 I-ETSELSNGG-TTTDAKEKSRNYYENLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTP 801
Query: 686 DKRSKLPGWI 695
++KL W+
Sbjct: 802 RIQNKLSQWV 811
>gi|449300032|gb|EMC96045.1| hypothetical protein BAUCODRAFT_514453 [Baudoinia compniacensis
UAMH 10762]
Length = 831
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 164/662 (24%), Positives = 288/662 (43%), Gaps = 90/662 (13%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK--------ILAIGLSSRKNLCVNSR 120
K+ +C+RT ++ + + EL+ + + G AK + + L SRKNLC+N +
Sbjct: 196 KIYFCSRTHSQLSQFVRELRRVQLPPSMPPGAEAKLDEHVHEAVKQVPLGSRKNLCINPK 255
Query: 121 VLAAENRDSVDAAC--RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
V+ ++ +++ C ++T + P+ + + ++ A A + ++
Sbjct: 256 VIKLGDQTAINERCVELQQTKTPAEHRCPYLPSKDNEDLVLDFRDHALARI-----RDIE 310
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DL G + G CPY+ +R + A +V Y LL + ++ + VVV DEAHN
Sbjct: 311 DLAEVGARLGICPYYASRTAIGAAELVTLPYPLLLQKSARDALGISLRGQ-VVVIDEAHN 369
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL----AL 294
+ + S + +E R+ S + ++RF+ G R ++V L +
Sbjct: 370 LASAVEGIYSAKISDMLVE---RSKSSMLIYLQRFRNRLKGANRVYVTQVVRVLDSLLSF 426
Query: 295 RGNLPNAWLSNPALPSDIL---KEAVPGNIRRAEHFLHVLRRLVQYLRG-----RLETEN 346
+L NA ++ + + L K NI + HFL V +L + + G ++ ++
Sbjct: 427 FASLLNAPRTSGTVEASRLLAGKGVDQVNISKLIHFLTV-SKLARKVEGYASHLTIKQDS 485
Query: 347 VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
+ + PV A DT H+Q ATLV
Sbjct: 486 ADNKSPVENTA------------------------------DTPALTHVQAF--LATLVN 513
Query: 407 TYTRG-FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
+ G FS IE LQ D + + + D ++V++ GT+SP+D Y
Sbjct: 514 PSSDGRFSWSIETGRRE--------LQYMLLDPAEHFRGIVDETRAVILAGGTMSPMDDY 565
Query: 466 -PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSD-QLPVSTKFDMRSDPGVARNYGKLLV 523
RL + P ++ +F +V T +D + + + R+D R G L+
Sbjct: 566 QERLFPYLPSLT-TFSCGHLIPPSNLLVRTIATDAKGTIELSYKSRNDATAVR-IGDALL 623
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR 583
++ + V G+V F SY ++ ++ W+ ++ + Q K VF +++ + Y
Sbjct: 624 KVATYVQGGLVVFLPSYGFLQQLYDCWHAHSMIARLEQIKAVFWDSR-TMSAEAVFKAYT 682
Query: 584 KAC-DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF 642
+A +GA+ SV GK++EGI+F GR V++ G+PF + AR++YL D
Sbjct: 683 EAIYTSAKGAILLSVLGGKLSEGINFSDDLGRCVVVVGLPFPNLETPEWKARMQYL-DEK 741
Query: 643 QIKEGDFLTFDALRQAA---------QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPG 693
+ G+ L A R+ A Q VGRVIR K D+ ++ D RY + R KLPG
Sbjct: 742 AVGRGE-LKGKASREHAENVCMRAVNQAVGRVIRHKDDWASIVLMDSRYLQSRIRQKLPG 800
Query: 694 WI 695
WI
Sbjct: 801 WI 802
>gi|238881932|gb|EEQ45570.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 841
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 156/670 (23%), Positives = 285/670 (42%), Gaps = 96/670 (14%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P+K+ + +RT ++ + ++L+L N+Q + I L SRK LC+N +V +
Sbjct: 198 ECPIKIFFSSRTHSQLNQFSSQLRLT-NFQASFEDLEERTKYIPLGSRKQLCINEKVRSK 256
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFF-ENYEKAAS----AAVLPPGVYTLQD 179
EN SV+ AC L E C++ +NY ++ A + + ++D
Sbjct: 257 ENDQSVNDACLD--------LQRET---NGCQYLPKNYMMSSVTKEFADLSLAKIRDIED 305
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G + CPY+ R ++ ++ YQ + I++ +++ +++ DEAHNI
Sbjct: 306 LNELGIELNICPYYSVRKGIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIII-DEAHNI 364
Query: 240 DNVCIEALSVSVRRQTLEGATRNLS-RINQEIERFKATDAGRLRAEYNRLVEGLA----- 293
+V S+ + L ++L +N+ ++R + + R +L++
Sbjct: 365 IDVITSMYSIKITSDQLNKVIKSLKIYLNKFLKRLNSGN----RINLMKLIKICQILLKF 420
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPG--NIRRAEHFL---HVLRRLVQYL-RGRLETENV 347
L N + DI K++ NI + + FL + ++ Y+ + +ET+
Sbjct: 421 LNTNSEKVKSGDEVQIQDIFKDSTGDLVNIHKLDQFLTKSKIAHKIESYIEKTEMETDTG 480
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
EK+G ++ + + + + + L ++ +F + GT
Sbjct: 481 EKKGRITNSGGSSRSSSSNP----LLFTIIKFLRTLTNLSKEGKFF-------WDNENGT 529
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR 467
+ + ++ DP S K + D+ + V++ GT+ P+ Y
Sbjct: 530 ISLNYMLL------------DP---------SAVFKEIVDQAKCVLLCGGTMEPMSDYMD 568
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL-PVST--------KFDMRSDPGVARNY 518
L F V + C V+ + + Q+ P+S F R+D
Sbjct: 569 YL-FPSVPTNKINT-----FACGHVIPKENLQVFPISQWNDTNFEFSFQKRNDSKQLMAL 622
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G+ L+E+ VP G+V FF SY Y+D+++ W D+ IL I K +F E +D
Sbjct: 623 GEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWRDTKILTSIESEKTIFREPKDPSNVEKV 682
Query: 579 LDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
L+ Y R GA+ FSV GK++EGI+F R VIM G+P+ S ++ + +Y
Sbjct: 683 LNEYGYLIQTERKGAILFSVVGGKMSEGINFSDDLARAVIMVGLPYPNAYSGEMVTKRKY 742
Query: 638 LRDTFQIKEGDFLTFDA------------LRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
+ + G T DA +R Q +GR IR DY ++ D+R+S
Sbjct: 743 IETSVLSNGG--TTTDAKEKSRNYYENLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTP 800
Query: 686 DKRSKLPGWI 695
++KL W+
Sbjct: 801 RIQNKLSQWV 810
>gi|134107760|ref|XP_777491.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260183|gb|EAL22844.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 883
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 173/681 (25%), Positives = 292/681 (42%), Gaps = 92/681 (13%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAEL--KLLHNY-----QTRHLGPAAKILAIGLSSRKNLCV 117
E+ K+ Y +RT ++ + +EL +Y + P+ + + L SRK LC+
Sbjct: 215 EDAPKVYYTSRTHTQLRQLTSELLKTSFASYDSVPESSSAEAPSHGVSLVPLGSRKQLCI 274
Query: 118 NSRVLA-AEN--RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-- 172
N +V A A N + ++ AC L + CEF KA +L
Sbjct: 275 NEKVRALARNGGDERMNEAC----------LDMQKSGKARCEFLP--AKADEITMLDARD 322
Query: 173 ----GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
V ++D+ GK+ CPY+ R V+ + +V Y LL + ++ K
Sbjct: 323 TILASVKDIEDIVTMGKKSCVCPYYATRKAVKQSQIVTLPYNLLLQKNSREALGIKL-KN 381
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
VVV DEAHN+ + + ++ L A +S++ Q ++RFK+ RL+ ++
Sbjct: 382 QVVVIDEAHNLIDTLLSIHCTTLTSTNLANA---VSQLQQYLQRFKS----RLKPIHSLW 434
Query: 289 VEG-LALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
++ L+L L KE+ P + E L V + + G + +
Sbjct: 435 IQQILSLLQGLIRVCDKFFQDAKSQTKESKPVGKPKVE-VLDVNNLMGRIGGGSDQVNPI 493
Query: 348 E-----KEGPVS-----FVASITAHAGI-DQKTLRFCYERLHSLMLTLEITDTDEFLHIQ 396
E KE ++ F + A + D KT R R S+ F +++
Sbjct: 494 ELLAYLKESRLARKISGFSEHVAEQAALKDAKTSRSATARHASIAA---------FHNVE 544
Query: 397 TICDFATLVGTYTRGFSII-IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVIT 455
+ +LV G I+ I+ D+ P + V++ + S K V + +SV++
Sbjct: 545 SF--LLSLVDAKDDGRIILSIDDLDKSEPVV---VIKYVLLNPSERFKEVVEEARSVILA 599
Query: 456 SGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMR 509
GT+ PI + L P + + +L+ + P V++ G + KF R
Sbjct: 600 GGTMEPITDF--LQQLFPSIPKDRLSTLSCSHVIPKVNLLTQVVSVGPRKSEFEFKFGNR 657
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+D + + G +L + +VPDG+V F SY+++D++ A W SG+L+ + + K +F E
Sbjct: 658 NDEALLTDLGAVLQATIGVVPDGVVVFLPSYAFLDKVRAFWTKSGLLQRLGERKQLFYEP 717
Query: 570 QDV--VET-----TLALDNYRKACDCGR-----GAVFFSVARGKVAEGIDFDRHYGRLVI 617
Q VET LA+ + G+ GA+ F+ V GI+F + GR VI
Sbjct: 718 QTSGDVETILRDYALAISSCYATSTSGQKSRKTGALMFA-----VVGGINFSDNLGRCVI 772
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEG---DFLTFDALRQAAQCVGRVIRSKADYGM 674
M G+PF S L R+ Y+ +G + +R Q +GR IR DY
Sbjct: 773 MVGLPFANVSSVELQERMRYVETVPGAGQGASREMYENLCMRAVNQSIGRAIRHANDYAT 832
Query: 675 MIFADKRYSRHDKRSKLPGWI 695
++ DKRY+ R+KLP WI
Sbjct: 833 ILLVDKRYATSRIRNKLPKWI 853
>gi|297850492|ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
gi|297338969|gb|EFH69386.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
Length = 1171
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 187/810 (23%), Positives = 308/810 (38%), Gaps = 186/810 (22%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDA---KGHC--LLEMPTGTGKTIALLSLI 56
++++ + V FPY Y Q ++M + LD GHC LLE PTGTGK+++LL +
Sbjct: 26 VYQIGGLQVEFPY-QPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSV 84
Query: 57 ----------------------------------------------TSYVLSKPENPVK- 69
S + K E K
Sbjct: 85 LAWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKAETATKK 144
Query: 70 ------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA 123
+ Y +RT ++ + + E + +T + P A L+SRK+ C N VL
Sbjct: 145 RTKIPTIYYASRTHSQITQVIREYR-----KTGYRVPMAV-----LASRKHYCTNRHVLG 194
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP----GVYTLQD 179
+N D W N K S L P V+ ++D
Sbjct: 195 KDNVDD----------EW------------------NVNKITSHPSLQPRGHNEVHDIED 226
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L GK CPYF + M + A +V Y Y+++P + + ++ K ++++FDEA +
Sbjct: 227 LVKVGKNVRGCPYFASWSMAENAQLVFCPYSYIVNPVIRAGVEVDL-KGAIIIFDEAQFL 285
Query: 240 DNVCIEALSVSVRRQT----LEGATRNLSRINQEIERFKATD----------AGRLRAEY 285
+ + + S + T +E R ++ E+E+ L +
Sbjct: 286 SMLVMLMIRPSTKSFTVHSNMEDIAREAGKLQNELEQMSLAQPMIYQPLCEVVEGLISWI 345
Query: 286 NRLVEGLALRG--NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE 343
R + LA R + ++W + AL +E NI R E F +L + +R E
Sbjct: 346 GRKKDSLAKRDFQHYFSSWTGDKAL-----RELEESNITR-ECFPILLECFTKAIRTSKE 399
Query: 344 TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFAT 403
E +S ++ +T T F H L D L +Q
Sbjct: 400 AEMESDMLYLSGISVLTLEELFSSLTYFFSRNGSHIL---------DYQLGLQRSTKRGD 450
Query: 404 LVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
T+T FS L C + ++ K + D S+++TSGTLSP++
Sbjct: 451 PSRTWTHTFS-------------------LWCMNPAVVFKDLADISLSIILTSGTLSPMN 491
Query: 464 LYPRLLNFHPVVSRSFKMSLTRDC-ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLL 522
+ L S + + + ++ G P++ + GK L
Sbjct: 492 SFSSELGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKTADTYSFQDALGKSL 551
Query: 523 VEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE----TQDVVETTLA 578
E+ +IVP G + FF SY M+++ W ++G + K +F+E QD ++ L
Sbjct: 552 EEICTIVPGGSLIFFPSYKLMEKLCTRWRETGQWSRLCLKKDLFVEPRGGAQDEFDSVLK 611
Query: 579 ------------LDNYRKACDCG-----------RGAVFFSVARGKVAEGIDFDRHYGRL 615
+ R+A G +GA F +V RGKV+EGIDF R
Sbjct: 612 GYYDSIRGKNKLVGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDFADDNARA 671
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIKE-----GDFLTFDALRQAAQCVGRVIRSKA 670
VI+ G+PF L I + + DT++ + ++ A R Q GR IR +
Sbjct: 672 VIIVGIPFP-NLHDIQVGLKKKYNDTYKSSKSLLGGSEWYCQQAYRALNQAAGRCIRHRF 730
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
DYG +IF D+RY R+ + W+ ++
Sbjct: 731 DYGAIIFLDERYKEQRNRASISKWLRQSIK 760
>gi|394994903|gb|AFN42926.1| XPD2 protein, partial [Plasmodium falciparum]
Length = 526
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 147/280 (52%), Gaps = 61/280 (21%)
Query: 96 RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN------ 149
+ G ++ILAIG+S+R+ +C+N +VL R+ +D CRK TA+++R N
Sbjct: 168 KEFGENSEILAIGISARRCMCINDKVLLKHEREKIDEECRKLTATFIREKKYINIKIDNE 227
Query: 150 ---PNIET-----------------------------------CEFFENYEKAASAAVLP 171
PN++ C ++ENY+K ++
Sbjct: 228 IYHPNVDKISDFILRNRHHLDIEDYFDIYNSRNSLEEYDNIGLCGYYENYKKEFLYDLIK 287
Query: 172 PGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQYLLDPKVAGIIS- 222
PGVYT++DL+ K CPYF A+ +++ + V++ +YQY++DPKV+ +
Sbjct: 288 PGVYTIEDLKVLCKNYKNKENVNVPICPYFCAKKIIEISKVIILNYQYVIDPKVSKALFS 347
Query: 223 -KEMQKE-------SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
K+M K ++VFDEAHNID+VC+EALSV++ R L A+ N++++ ++IE+ K
Sbjct: 348 WKDMNKNVHLKNKNDIIVFDEAHNIDSVCLEALSVNIDRNILNKASMNITKLMKKIEQSK 407
Query: 275 ATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILK 314
+ +L+ E N+++E + L+ + ++N + D +K
Sbjct: 408 MLNEQKLKEECNKILEKIKLQKCNQSLNVTNNVINIDNMK 447
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+DV ++FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFNLDDVEIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ 94
K + K I+CTRTV EMEK+L ELK + Y+
Sbjct: 62 YHKKDEG-KFIFCTRTVAEMEKSLLELKKVIQYR 94
>gi|167527059|ref|XP_001747862.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773611|gb|EDQ87249.1| predicted protein [Monosiga brevicollis MX1]
Length = 812
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 140/265 (52%), Gaps = 10/265 (3%)
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKM-----SLTRDCICPMVLTRGSDQ 499
+ ++V++ GT+SP+ + L S + + +CP+VLT+ S++
Sbjct: 528 ILQSARAVIVAGGTMSPVTDFVEQLTTQATKSVAVHHFACGHVVPSSHLCPIVLTQTSNR 587
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
P+ F R + R G+ L+ + + VP G+V FF SY Y +++ W G+L++
Sbjct: 588 QPLRLTFSTRQSEAMMRELGESLIRVAATVPAGLVVFFPSYEYEQKLVEFWTRQGVLRKF 647
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
+HK +F E + + + L Y A G GA FSV GK++EGI+F GR V+M
Sbjct: 648 ERHKPIFREPRAGKDVDVVLQQYATAIQKG-GAALFSVVGGKLSEGINFKDDLGRCVVMV 706
Query: 620 GVPFQYTLSKILLARLEYLRD---TFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMM 675
G+P+ SK L ++ +LR + + +G ++ L+ Q +GR IR + D+ +
Sbjct: 707 GMPYPNLHSKELQEKMAFLRSQPASGSVDKGQEYYENLCLKAVNQSIGRAIRHRGDFAAV 766
Query: 676 IFADKRYSRHDKRSKLPGWILSHLR 700
I D+RY+ R+KLPGW++S+L+
Sbjct: 767 IMLDERYATPRVRNKLPGWMMSNLK 791
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
+++L A ++ C Y+ AR V A +VV Y LL K + S +VV+ DEA
Sbjct: 288 VEELAAMASREKACAYYAARKAVAPAELVVVPYNMLLH-KSTRLASGLQLTNNVVIIDEA 346
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
HN+ + SV+V L GA R+L Q R+KA RL+A+
Sbjct: 347 HNLMDTIANIHSVTVTGDILLGAHRDLLEYCQ---RYKA----RLKAK 387
>gi|340931927|gb|EGS19460.1| hypothetical protein CTHT_0049210 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 918
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 180/736 (24%), Positives = 289/736 (39%), Gaps = 146/736 (19%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKL--------LHNYQTRHLG---PAAKILAIGLSSRK 113
E VK+ Y +RT ++ + + EL+ T +LG P + + LSSR+
Sbjct: 215 EEEVKIYYTSRTHSQIAQFIGELRRPAFPTSIPEDMLSTDNLGKGPPTEPVKQVPLSSRQ 274
Query: 114 NLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG 173
LC+N V + +++ C + PN + + + A+ LP
Sbjct: 275 KLCINPSVARLNSLSAINDRCTELQQGKSGHKCPFIPNADNLKQVHEFRDTVLAS-LP-- 331
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++DL GK CPY+ +R + A VV Y LL + +++ ++V+
Sbjct: 332 --DIEDLYRVGKDLQVCPYYASREAIPGAEVVTLPYPLLLQKSAREALGIKLEG-NIVII 388
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLVE 290
DEAHNI + + +R L A L ++RF G R A+ R+VE
Sbjct: 389 DEAHNIMDAIANVHAAEIRLSELRRAREMLGVY---VKRFGKKLKGENRMMVAQVGRVVE 445
Query: 291 GLALRGNLPNAWLSNPALPSDILKEAVPGN----IRRAEHFLHVLRRLVQYLRGRLETEN 346
L+ WL N AL V N R A+ L +L++Y++
Sbjct: 446 SLS-------EWL-NTALNGKGDHGIVDSNSLLKARGADQI--NLYQLIKYIQDSKLAYK 495
Query: 347 VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
VE S+V+ Q LH+L+ + T +
Sbjct: 496 VE-----SYVSHKEEEEAQGQGKTSTTTPVLHTLV---------------SFLSALTNLS 535
Query: 407 TYTRGF--SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
T R F ++ P D ++ ++ L H A + ++V++ GT+SP D
Sbjct: 536 TEGRIFYEKLLTTPSDIKLSYL----LLSPTH----AFSSIVSAARAVILAGGTMSPFDD 587
Query: 465 YPRLLNFHPVVSRSFKMSLTRDCICP--------MVLTRGSDQLPVSTK------FDMRS 510
Y + P++S +L+ + P + TR Q + F RS
Sbjct: 588 YK--AHLFPMLSEDKITTLSCGHVIPSSNLFVWTLASTRPGQQGSAAASDAFEFSFQKRS 645
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN--------------DSGIL 556
DP + R G +L+ + S+VPDG+V FF SYSY+DE++A W +
Sbjct: 646 DPAMIRQLGLVLLNICSVVPDGVVVFFPSYSYLDEVVAAWQAPETQNGPSVSFQRKQTLW 705
Query: 557 KEIMQHKLVFIETQDVVETTLALDNY-----------RKACD-CGR-GAVFFSVARGKVA 603
+ K +F E++ + L Y R+ D GR GA+ SV GK++
Sbjct: 706 DRLAAKKTLFRESKGGSSDEI-LQQYSDAIFSAGTASRQQLDPTGRGGALLLSVVGGKLS 764
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK----------EG------ 647
EGI+F GR V++ G+P+ S AR+EY+ +T I EG
Sbjct: 765 EGINFSDRLGRCVVVVGLPYPNINSPEWKARIEYV-ETAAIARLTSSKTSRFEGEGDKTQ 823
Query: 648 ------------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS 689
DF +R Q +GR IR + DY ++ D+R+ R
Sbjct: 824 SRALTREEALPLARQVARDFYENACMRAVNQSIGRAIRHRGDYAAVVLIDRRFGTDRIRG 883
Query: 690 KLPGWILSHLRDAHLN 705
KLPGWI + + N
Sbjct: 884 KLPGWIRQGMVEGSEN 899
>gi|356547406|ref|XP_003542103.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Glycine max]
Length = 1001
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 23/292 (7%)
Query: 430 VLQLSCHDASLAVKPVFDRF--QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC 487
L C + +A++ F ++ +S+++TSGTLSP++ + + L + +T +
Sbjct: 414 TLSWWCFNPGIAMED-FPKYGVRSIILTSGTLSPMESFAQELKLDFPIRLENPHVITANQ 472
Query: 488 ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
I VL G ++ + R P + G +V + IVPDG++ FF SY +D+II
Sbjct: 473 IWAGVLPVGPSGRTFNSSYRTRDSPEYKQELGNAIVNLARIVPDGLLVFFPSYYLLDQII 532
Query: 548 ATW-----NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARG 600
A W N + I I +HK IE +D L++ +Y + GA+FF+V RG
Sbjct: 533 ACWKSSNENSTSIWDRICKHKKPVIEPRDSSSFPLSIKDYMTTLNDTSASGAIFFAVCRG 592
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF------LTFD- 653
KV+EG+DF H GR V++ G+PF + + + EYL D +G+ LT D
Sbjct: 593 KVSEGLDFADHAGRAVVITGLPFATSTDPKVRLKREYL-DQQSRPQGELFKVMPVLTGDE 651
Query: 654 -----ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q VGRVIR + DYG +IF D+R+S ++S++ WI H++
Sbjct: 652 WYNQQASRAVNQAVGRVIRHRYDYGAIIFCDERFSHPHRQSQVSRWIQPHIK 703
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 60/279 (21%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL--------- 53
+K+ + V FPY+ Y Q YM ++ ++L K + LLE PTGTGKT+ LL
Sbjct: 4 YKIRGIDVDFPYE-AYESQLVYMDKVIQSLQEKCNALLESPTGTGKTLCLLCATLAWRKS 62
Query: 54 --SLITSYVL-----SKPENPVK-----------LIYCTRTVHEMEKTLAELKLLHNYQT 95
S T + S+ +N V ++Y +RT ++ + + ELK +Y+
Sbjct: 63 LGSFTTGVSMQADDKSEGKNDVSSSQSESSRFSTIVYASRTHSQIRQVIQELKRT-SYRP 121
Query: 96 RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAENPNI 152
+ + L SR+ LC++ V + +A CR+R
Sbjct: 122 K---------MVVLGSREQLCIHDEVKLLRGKTQTNACRLLCRRRGKRHCNHFK------ 166
Query: 153 ETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYL 212
+ E+ ++ + V ++DL G++ G CPY+L++ + +F ++V Y YL
Sbjct: 167 KVPEYMKDNPQLGEEPV------DIEDLVNIGRRFGPCPYYLSKELHKFVDIVFAPYNYL 220
Query: 213 LDPKVAGIISKEMQ---KESVVVFDEAHNIDNVCIEALS 248
+D K +Q S+++FDEAHN++++C +A S
Sbjct: 221 IDRGY----RKSLQLSWSNSILIFDEAHNLESICADAAS 255
>gi|335310791|ref|XP_003362194.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit, partial [Sus scrofa]
Length = 308
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 94/139 (67%)
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW 189
VD C TAS+VRA ++P++ C F+E LP G+Y L DL+A G++QGW
Sbjct: 52 VDGKCHSLTASYVRAQYQQDPSLPHCRFYEXXXVHGRQVPLPAGIYNLDDLKALGRRQGW 111
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CPYFLAR+ + ANVVVYSY YLL ++SKE+ +++VVVFDEAHNIDNVCI+++SV
Sbjct: 112 CPYFLARYSILHANVVVYSYHYLLXXXXXDLVSKELARKAVVVFDEAHNIDNVCIDSMSV 171
Query: 250 SVRRQTLEGATRNLSRINQ 268
++ R+ L+ NL + +
Sbjct: 172 NLTRRMLDRCQGNLETLQK 190
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 84/119 (70%), Gaps = 10/119 (8%)
Query: 373 CYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQ 432
C ERL SL+ TLEI D +F + + +FATLV TY +GF+IIIEPFD+R P I +PVL
Sbjct: 200 CAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPVLH 259
Query: 433 LSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM 491
SC DASLA+KPVF+RFQSV+ITSG +L+FHPV +F M+L R C+CPM
Sbjct: 260 FSCMDASLAIKPVFERFQSVIITSG----------ILDFHPVTMATFTMTLARVCLCPM 308
>gi|193608349|ref|XP_001949260.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Acyrthosiphon pisum]
Length = 890
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 158/691 (22%), Positives = 287/691 (41%), Gaps = 86/691 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
VK+ +C+RT ++ + +AELK P + I L+SR+N C+N V +N
Sbjct: 206 VKIYFCSRTHSQLSQFVAELKK---------SPYSTSRIIPLASRQNYCINRTVKKLKNI 256
Query: 128 DSVDAAC----------RKRTASWVRALAAENPNIETCEF-FENYEKAAS-AAVLPPGVY 175
++ C + S V ++ + C+ + + +K S A + +
Sbjct: 257 TLMNERCLEMGKPKPTQKPTKVSSVGSVVKKKKTEPICKCPYNDKDKIQSLAEEVTIELR 316
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
+++L G Q CPY+ +R V++A +V Y LL ++ ++ + DE
Sbjct: 317 DMEELVNRGDQISACPYYASRESVKYAQIVTLPYNTLLHKSTREASGIRLEG-NIFIIDE 375
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE-RFKATDAGRLRAEYNRLVEGLAL 294
AHN+ + S + Q L + L + + E RF A++ L N+L+ +
Sbjct: 376 AHNLLDTIGHIHSSQINGQQLTHSYSQLIQYKNKFELRFSASNLLHL----NQLI---YV 428
Query: 295 RGNLPNAWLSNPALP-SDILKEAVPGNIRRAEHFLHVLR----------------RLVQY 337
G L N P + ++ ++ V + E F+H ++ Q
Sbjct: 429 IGKLINMLGGTPGVSHAEASRKGVDSKVYTLESFVHQAEIDHLNMFMLVDFFKRSKIGQK 488
Query: 338 LRGRLE----TENVEKEGP-----VSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITD 388
+RG E + +++ P +F+ I K L+ E H + ++ D
Sbjct: 489 IRGYSEKYMPSVSLQPSKPKLSNLQTFLKQIETKKNSKGKELKED-ENKH---IDPQVAD 544
Query: 389 TDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR 448
+ + F + Y II + VL+ + ++ K + D+
Sbjct: 545 IISNNPLTPVMAFIESLTNYCEDGRII----STTQAFVSKGVLKFLLLNPAVHFKEIVDK 600
Query: 449 FQSVVITSGTLSPIDLYP-RLLNFHP-----VVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
+SV+++ GT+ PI + +L NF+ ++ S + D I P+++ G P
Sbjct: 601 ARSVIVSGGTMEPISEFKDQLFNFNGDNSDRIMHFSCGHVVPPDHILPLIVCSG----PT 656
Query: 503 STKFDM----RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+FD R+ + G LL + VP GIVCFF SY Y + + ++
Sbjct: 657 GKQFDFSYQERTSIKMLNEIGSLLENICRTVPAGIVCFFPSYDYEQFVYQYLEKNKVINR 716
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGR-------GAVFFSVARGKVAEGIDFDRH 611
+ + K +F E + + L NY +A GA+ FSV GK++EG++F
Sbjct: 717 LSERKKLFREPKSTNQVDEVLKNYSQAITTTSVLNSKVTGALLFSVIGGKLSEGLNFSDD 776
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD-ALRQAAQCVGRVIRSKA 670
GR VI+ G+P+ S L ++ YL + G + ++ Q +GR +R +
Sbjct: 777 LGRCVIVIGLPYPNIKSLELQQKMNYLNSHMGLGTGQQHYENLCMKAVNQSIGRSVRHQQ 836
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
DY ++ D RY R R+ LP W+ L++
Sbjct: 837 DYAAVLLLDHRYQRDSVRNALPKWLQPSLQE 867
>gi|50293497|ref|XP_449160.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637307|sp|Q6FKT4.1|CHL1_CANGA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49528473|emb|CAG62130.1| unnamed protein product [Candida glabrata]
Length = 830
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 168/728 (23%), Positives = 313/728 (42%), Gaps = 105/728 (14%)
Query: 6 EDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE 65
ED V PY++ E LE K AL + LL + K + L S +
Sbjct: 153 EDEFVAKPYESDGEETTD--LEKKEALSKEVQELLAKFDSSKKNTDNVEL--GRFASASQ 208
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA--KILAIGLSSRKNLCVNSRVLA 123
N V++ + +RT ++ + +LKL N+ + A ++ + L S+K LC+N V
Sbjct: 209 NQVRIFFSSRTHSQLNQFAEQLKLT-NFPSSFPDKVAHERVKYMPLGSKKQLCINPDVKK 267
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAA-------VLPPGVYT 176
+ + ++ AC S VR + E C F++N K ++ + ++
Sbjct: 268 WKTLEGINDAC-----SEVRR------SKEGCPFYQNTPKWHNSKETNHFRDQVFSDIHD 316
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++D+ G+ CPY+ AR + + +V YQYLL + ++ K S+VV DEA
Sbjct: 317 IEDIAKVGESLAVCPYYAARDFIPSSEIVTLPYQYLLSESTRSQLRLDL-KGSIVVIDEA 375
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
HN+ + S + +L ++ + I +++FK+ R +L + + +
Sbjct: 376 HNLVDTINSIHSAEI---SLSELKQSYNSIILYMKKFKSRLNPGNRVNLLKLSKLITVLI 432
Query: 297 NLPNAWLSNPALPSD---ILKEAVPG--NIRRAEHFL---HVLRRLVQYLRGRLETENVE 348
N P L D IL+ N+ R ++ H+ +L Y++ E E+
Sbjct: 433 NFITTHYKKPGLEVDAFSILESNNTDMLNVHRVLKYIKTSHIAYKLDTYIQKLQEKESPS 492
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY 408
+ P S Q L ++ + L T ++ G++
Sbjct: 493 NQKPSS------------QPLLY----KISKFLECLNNTSSE---------------GSF 521
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
F ER P + +L+ S + + D + V++ GT+ P+ +L
Sbjct: 522 ----------FFERGPSLRYMLLE-----PSRIFQDIIDSARCVILAGGTMEPVS---QL 563
Query: 469 LNFH-PVVSRSFKMSLTRDCICP--MVLTRGSDQLPVSTKFDMRSDPGVARNY-GKLLVE 524
L + P + S + + + P + T ++ F+ R+ + +N+ +E
Sbjct: 564 LQYLVPKLDDSSITKFSCNHVIPDSHLRTYIVNEPQFEFTFEKRNSVNLVQNHLFNFYLE 623
Query: 525 MVSIVPD--GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY 582
+ + +P GI+ FF SY Y+DEII +W +G+ +++ + + VF E +D + L +Y
Sbjct: 624 LSTTIPKTGGIIGFFPSYKYLDEIIVSWRKAGLFEKLDKERKVFYEMKDGPD---PLPDY 680
Query: 583 RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF 642
A GA+ F++ GK++EGI+F + R ++M G+P+ S L+ ++L +
Sbjct: 681 TSAVANSEGAILFAIVGGKLSEGINFGGNLCRAIVMTGLPYPNVFSGELIISRKHLEEKV 740
Query: 643 ----------QIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
+ +F ++ Q VGR IRS DY ++ DKRY+ + +SKL
Sbjct: 741 LNGGGSKTDANMAAKEFFENICMKAVNQSVGRSIRSINDYSLIYLLDKRYANANIQSKLS 800
Query: 693 GWILSHLR 700
W+ S ++
Sbjct: 801 QWVRSRIQ 808
>gi|302504842|ref|XP_003014642.1| hypothetical protein ARB_07204 [Arthroderma benhamiae CBS 112371]
gi|291177948|gb|EFE33739.1| hypothetical protein ARB_07204 [Arthroderma benhamiae CBS 112371]
Length = 812
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 145/299 (48%), Gaps = 32/299 (10%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLY-PRLLNFHP---VVSRSFKMSLTRDCICPMV 492
D + K + + ++V++ GT+ P+D Y LL++ P + + ++ + +D + +
Sbjct: 498 DPTSRFKELVEDARAVILAGGTMEPMDDYVNHLLSYLPREKIKTFTYGHVIPKDNLMAIP 557
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-N 551
+ RG D + FD R + + G+ +V SI+PDG+V FF SY Y+ ++ W +
Sbjct: 558 IDRGMDGTEFNFTFDQRRSEKMIISLGRTIVRYCSIIPDGVVVFFPSYDYLATVLKVWSS 617
Query: 552 DSGILKEIMQHKLVFIETQDV----------VETTLALDNYRKACDCGRGAVFFSVARGK 601
SGIL + + K +F E Q T L Y + D G+G + SV GK
Sbjct: 618 SSGILNSLSRLKPIFHEPQSTGSMNVSANANTSTDSLLSKYSASVDAGKGGLLLSVMGGK 677
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY-------LRDTFQIKEGD------ 648
++EGI+F GR VI+ G+PF T + I A+L++ L D+ Q EG
Sbjct: 678 LSEGINFSDALGRGVIVVGLPFPNTRNAIWQAKLQHVERKAYELADSIQSDEGRRACGKA 737
Query: 649 ----FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
+ +R QC+GR IR K DY ++ D+RY + KLPGWI L H
Sbjct: 738 ASRAYYENTCMRTVNQCIGRAIRHKGDYAAILMIDRRYQTERIQGKLPGWIRGSLLKNH 796
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 40/271 (14%)
Query: 46 TGKTIALLSLITSYV----LSKPENPVKLIYCTRTVHEMEKTLAELK------------- 88
+ T+ALL + L + VK+IYC+RT ++ + E++
Sbjct: 117 SSDTLALLEKLKGPAQRIELEEDNESVKIIYCSRTHSQLIQFAQEMRRVMPISSIPPDLD 176
Query: 89 --LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAAC----RKRTASWV 142
L + I L+SRK LC+N V + + +++ C R A+
Sbjct: 177 DNLKEEKKENQQDEGEWIKHTPLASRKTLCINPSVRSLSSATAINERCLEIQRPNAAAEH 236
Query: 143 RA--LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQ 200
+ L ++ ++T +F ++ L V ++DL G + G CPY+ +R ++
Sbjct: 237 KCPYLPTKDNELKTSQFQDH---------LLARVNDIEDLPPLGTKMGICPYYASRTAMR 287
Query: 201 FA--NVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
+ VV Y LL ++ K SV+V DEAHN+ + + SV+V L
Sbjct: 288 ASATEVVTLPYPLLLQQSAREALNLSA-KNSVIVIDEAHNLVDAIVNIHSVTVSLSQLRT 346
Query: 259 ATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
A L++I RFK+ GR R +L+
Sbjct: 347 A---LAQITTYARRFKSRLKGRNRVYIAQLI 374
>gi|429962084|gb|ELA41628.1| hypothetical protein VICG_01376 [Vittaforma corneae ATCC 50505]
Length = 657
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 160/714 (22%), Positives = 305/714 (42%), Gaps = 106/714 (14%)
Query: 4 KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV--- 60
K + V PY+ YP Q + +L + L+E PTGTGK++++L + ++
Sbjct: 5 KFNGIPVEIPYEP-YPPQLVTISKLIECFQTNTNALIESPTGTGKSLSILCSVLAFYEQE 63
Query: 61 ---LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
++ P K+ C+RT ++++ + +L R +I +G S+ C+
Sbjct: 64 KRRFNEQNKPFKIFICSRTHKQIDQLIDQL--------RKTIYRPRITVLG--SKNQYCI 113
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
NS + E++++ A K+ A C +F ++ + ++ +
Sbjct: 114 NSTLSKVEDKNTACAELIKKKA---------------CVYFNGKDRLIKR--IGEKIFDI 156
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ-KESVVVFDEA 236
++L+ GK+ CPYF AR + + A+++ Y YL+D V S E++ ++++ DEA
Sbjct: 157 EELKREGKKCAGCPYFTARELQEDADIIFAPYNYLIDTSVRE--SSEIKLDNAILIIDEA 214
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATD-AGRLRAEYNRLVEGLALR 295
HNI++ C A SV + + +E IN+ I K + G +R E+ L++ +
Sbjct: 215 HNIEDCCRSAGSVEITSKLIEIV------INELIGAIKRSALLGEVRGEFLSLMD---IF 265
Query: 296 GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
L + +N D+ + IR+ + + L ++ V KE +S+
Sbjct: 266 RKLKDHSQTNEF---DVKGKENQMKIRKGKEVIEELDKM-----------GVGKEAFLSY 311
Query: 356 VASITA-HAGIDQKTLRFCYERLHSLMLTLEITDTDEFLH-IQTICDFATLVGTYTRGFS 413
S+ A D K+L L+L +T FL ++ I G+ +
Sbjct: 312 KNSLQAIMKNEDAKSL-----------LSL---NTSRFLQEMERILGMVLFTGSEAYAYC 357
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF-- 471
+ DE + L D S+ P+ + +S+ + SGTL+P + L F
Sbjct: 358 -FTKYKDEGYSY------NLWLLDPSVMFLPLVSKIKSISLLSGTLTPFSSFCSELKFQF 410
Query: 472 -HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
H +V+ + + + + +G + + + K++V++ V
Sbjct: 411 QHKLVAPHI---IRTEQVFVASIRKGHLKQDLCGTYSTAETVAYLDQVSKIVVDIALHVK 467
Query: 531 D--GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD--VVETTLALDNYRKAC 586
+ G + F SYS+++++ + + +E +D +VE A++ Y++
Sbjct: 468 NEGGTLVFVPSYSFLNKLAGRISGA------------IVEPKDGGMVEFEKAIEAYKQRI 515
Query: 587 DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE 646
++F V RGK +EG+DF Y R V+ G+P+ + + EY T
Sbjct: 516 QKKATSIFICVYRGKASEGVDFRDEYSRAVVAIGIPYPSIRDPQIGLKKEYNDKTSGYNG 575
Query: 647 GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+ A R Q +GR IR D+G + D RY +S LP WI+S+++
Sbjct: 576 RLWYEAQAFRALNQALGRSIRHSNDWGSVFLIDSRYGEKRYQSGLPSWIVSNIK 629
>gi|452822263|gb|EME29284.1| putative DNA helicase required for mitotic chromosome segregation
CHL1 [Galdieria sulphuraria]
Length = 984
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 142/280 (50%), Gaps = 9/280 (3%)
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL-TRDCIC 489
L L C + +++ + + +V++SGTL+P+D + L H + S + ++ +C
Sbjct: 488 LCLWCFNPAVSFSYLQSHSRCIVLSSGTLTPMDSFSSELGIHFDIMNSLPHVIDVKNQVC 547
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
+ + G + + + F S G+ ++E ++PDG++CFF SY ++ ++
Sbjct: 548 AIASSCGPNSVDYDSTFAASSSIAYHDCLGQSILEYCRVIPDGVICFFPSYRLLESVVRR 607
Query: 550 WNDSGILKEIMQHKLVFIE--TQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGID 607
W SG KE+ K VFIE D V L +Y A +GA+F +V RGKV+EGID
Sbjct: 608 WRQSGYWKELESCKQVFIEPCQNDRVYFDNILLSYYHAIHKKQGALFLAVCRGKVSEGID 667
Query: 608 FDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-----IKEGDFLTFDALRQAAQCV 662
F Y R VI+ G+P+ ++ + EY D + + + A R Q +
Sbjct: 668 FKDEYARGVIIVGLPYPNLRDLQVIQKKEY-NDRYSASRKLLNGQRWYALQAFRSLNQAI 726
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA 702
GR IR K DYG+++ DKRY+RH+ LP W+ +R A
Sbjct: 727 GRCIRHKNDYGVIVLLDKRYTRHETLRNLPKWLAHQIRIA 766
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 34/230 (14%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
P K+ + TRT ++++ + EL+ +Y+ P IL SR C++++V+ ++N
Sbjct: 164 PPKIFFATRTHTQIDQVVQELRRT-SYR-----PKMDILG----SRDRYCIHNKVIRSQN 213
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG----VYTLQDLRA 182
R+ C+K L E +C + EK + L V+ ++DL
Sbjct: 214 RNE---ECKK--------LLEE----RSCSYAFGVEKVHNIKELSENHIHQVWDIEDLVR 258
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
GK+ CPYF ++ +++ A ++ Y YLLDP V + E+ S+V+ DEAHNI++V
Sbjct: 259 IGKRHNLCPYFSSQELMKTAELIFCPYSYLLDPVVRNAMQVELSN-SIVILDEAHNIEDV 317
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
C EA S V + LE L ++ + T GR + N V G+
Sbjct: 318 CREAASCEVFIEELEQVRTELETLDMN----QNTSMGRHLSLVNSFVSGV 363
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F++ + FPY+ YP Q+ +M ++ RA + + LLE PTGTGK++ALL + ++
Sbjct: 1 MPFQVYGTEIEFPYEP-YPVQFVFMEKILRACENSQNALLESPTGTGKSLALLCAVLAW- 58
Query: 61 LSKPENPVKL 70
K +N ++L
Sbjct: 59 QKKTKNKMQL 68
>gi|242025010|ref|XP_002432919.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518428|gb|EEB20181.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 852
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 161/688 (23%), Positives = 291/688 (42%), Gaps = 116/688 (16%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+K+ C+RT ++ + + EL+ + KI L+SR+N C+N VL ++
Sbjct: 205 LKIFLCSRTHSQLSQLVRELQ-------KSPYNDLKIRVASLASRQNYCINENVLKLKHL 257
Query: 128 DSVDAACRK----------RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
++ C++ +T+ L + N C ++ + L + +
Sbjct: 258 PLINEKCQELHDKNKSKTTKTSENGEVLKRQKANT-GCPYYNHSNIEDLKHTLLSEILDV 316
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKEMQKESVVVFD 234
+ L G + CPY+ +R+ V A V++ Y +L K GI K+SVV+ D
Sbjct: 317 EQLLHKGNKFNGCPYYASRYAVDDAQVIIVPYNTILHDSTRKACGI----NLKDSVVIID 372
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI-ERFKATDAGRLRAEYNRLVEGLA 293
EAHN+ + S S+ L + L + ++ +RF A + + + +V+ L
Sbjct: 373 EAHNLLDAIGNIYSCSISGYDLAASYSQLVQYKEKYSDRFSAINLLHIN-QLIFIVKKLF 431
Query: 294 LR-----GNLPNAWLSNPA-LPSDILKEAVPGNIRRAEHFLHVLR-----RLVQYLRGRL 342
++ G PNA ++ + + L E +P +F +L +V LRG +
Sbjct: 432 MKIGGKDGVHPNAVSNDKTEITLETLAEFIPSTEIDTINFYKILEFITKSNIVNKLRGFV 491
Query: 343 ET--------ENVEKEGPVSFVASITAHAG------------IDQKTLRFCYERLHSLML 382
+ E +G +F+ ++A G I+ L LHSL
Sbjct: 492 LKYKPSVILHKKEENKGVSAFLKKLSAKKGDFEEKPEAEDEIIEGNPLFNVTTFLHSL-- 549
Query: 383 TLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAV 442
T+ L + +C VGT T F +++ P H D
Sbjct: 550 ------TNHCLDGRIVCTINKTVGTSTLKF-LLLNP----ASHFED-------------- 584
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNF----HPVVSRSFKMS--LTRDCICPMVLTRG 496
+ +SV++ GT+ PI + L + P + F ++++ I P+++ G
Sbjct: 585 --IVKNARSVILAGGTMQPISEFTDQLFYLAGGSPDRLKVFTCGHVVSKENILPIIVPSG 642
Query: 497 SDQLPVSTKFDM----RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
P FD R + + G+LLV + ++VP GIVCFF SY Y + +
Sbjct: 643 ----PTGKVFDFSYQNRKNVEILDELGRLLVNISNVVPAGIVCFFPSYEYENFSYQHFEK 698
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHY 612
+G++ ++++ K V E + + L +Y +A GA+ FSV GK++EG++F+
Sbjct: 699 TGVIMKLLKKKKVLREPKKTNKVDEVLRDYSEAVK-KTGALLFSVVGGKLSEGLNFNDDL 757
Query: 613 GRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADY 672
GR +I+ G+P+ + L ++ YL T + Q +GR +R K DY
Sbjct: 758 GRCIIVVGLPYPNLTNPELKEKMNYLNQTVAVN--------------QSIGRSVRHKNDY 803
Query: 673 GMMIFADKRYSRHDKRSKLPGWILSHLR 700
++ D+R+S+ + LP WI L+
Sbjct: 804 ASVLLIDQRFSKTKCINALPQWIQESLQ 831
>gi|91080379|ref|XP_975049.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 676
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 141/279 (50%), Gaps = 8/279 (2%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C + + D+ V++TSGTL+P+ L + V + D +
Sbjct: 225 VLSYWCFSPGFGMNMLLDQGVHCVILTSGTLAPLKPLISELELNVGVRIENPHIVKGDQV 284
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
C +LT+G D P++ + R +P + G++++ ++ I+P G++ FF SY M +
Sbjct: 285 CVKILTKGPDGEPLNCNYQNRDNPNYLMSLGQVVLNLIRIIPHGVLIFFPSYPIMQKCQQ 344
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDN-YRKACDCG-RGAVFFSVARGKVAEGI 606
W +SGI I + K +F+E +D T A+ Y K D +GA+F V RGKV+EG+
Sbjct: 345 YWQESGIWDGINKIKAIFVEPKDKNSFTFAMSEYYSKVKDPNYKGAIFMGVCRGKVSEGL 404
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQC 661
DF GR V + G+P+ ++ + YL +D +K D+ + +A R Q
Sbjct: 405 DFADSNGRAVFIIGLPYPPLKDPKIILKKRYLDVCNAKDKEYLKGDDWYSLEATRAINQA 464
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+GRVIR K DYG +I D R++ + L W+ H++
Sbjct: 465 IGRVIRHKNDYGAIILLDSRFTNPRIQGNLSLWLKKHIK 503
>gi|391338586|ref|XP_003743639.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Metaseiulus occidentalis]
Length = 1132
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 186/792 (23%), Positives = 314/792 (39%), Gaps = 167/792 (21%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV------- 60
V + FP++ Y Q YM + L + LLE PTGTGKT++LL +++
Sbjct: 27 VNISFPFEP-YELQKDYMSAVLECLQKGWNGLLESPTGTGKTLSLLCSSLAWLEDRKAAM 85
Query: 61 ------------------------LSKPENPVK----------LIYCTRTVHEMEKTLAE 86
LS E P + ++Y +RT ++ + E
Sbjct: 86 QLNCEFRSAQSXSAYRETVRSLPKLSAAETPTQTSSSFDFYPQVLYSSRTHSQLSQASRE 145
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
LK + R++ ++ L SR LC+N V N C+
Sbjct: 146 LK---RTKYRYMN------SVVLGSRDQLCINPEVNGLPNSAQKIRKCQILV-------- 188
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
N CE+ NYE S +D F H+V ++V
Sbjct: 189 ----NSRACEYHRNYETKVSH----------ED-------------FTTNHVVDIEDLVT 221
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
++ P A +K ++K+S VVF + + + S RR G RN+
Sbjct: 222 LGKKHCCCPYYA---TKILRKKSDVVFVPYNYV-------VDPSTRRAQGIGLERNIVIF 271
Query: 267 NQ--EIERF---------KATD-AGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILK 314
++ IE F +TD AG ++ E A+ NL N+ +
Sbjct: 272 DEAHNIESFCEDSLSFAMSSTDMAGAMK-------EIDAVAQNLANS------------E 312
Query: 315 EAVPGNIRRAEHFLHVLRRLVQYLRGRLE-TENVEKEGPVSFVASITAHAGIDQKTLRFC 373
EA AE L VL+ ++ L R + +K F+ + + ID +
Sbjct: 313 EADNMEFNVAE--LSVLKSMLGELETRFDKAAETDKHYDGDFIVEMLQASEIDAQ----- 365
Query: 374 YERLHSLMLTL-----EITDTDEF----LHIQTICDFATLV--GTYTRGFSIIIEPFDER 422
+ER+ L+ +L I+ + + +Q + D + V G + + F E
Sbjct: 366 HERITGLLDSLLKYIQSISSQGPWGPKGIGLQKVLDMLSTVYSGGTAQELRESFKLFFEH 425
Query: 423 MPHIPDPV-----------LQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLN 470
P V L C + +K + SV++TSGTLSP+ L
Sbjct: 426 PKEGPKEVFVVERKKKKWELHFVCLAPGVRMKSIVQAGVHSVILTSGTLSPMGTLATELG 485
Query: 471 FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVP 530
+ S +T D I + + +G D + + + + RS R+ G L EM VP
Sbjct: 486 IPFQIQLSNDHIITPDKIQVLCVPKGPDNVELISTYQNRSSEKYIRSLGLTLNEMSRRVP 545
Query: 531 DGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC-DCG 589
G++ FF S++ M ++ W + GI++ + HK++ E + YR A +
Sbjct: 546 HGVLVFFPSFACMKALVEKWEEFGIMRRLKAHKMLLQEEPGSSSFNSTIQCYRDAVINNA 605
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD--TFQIKEG 647
+GA+ F+V RGK +EG+DF + R VI+ G+P+ + +++YL + +
Sbjct: 606 QGAMLFAVCRGKSSEGVDFSDEFARAVIIVGIPYAPRQDNRVKLKIDYLNKYGSDGMNGN 665
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI------LSHLRD 701
+ A+R Q +GRVIR + D+G+++F DKR++ S+L W+ L R
Sbjct: 666 TWYQIQAIRAINQAIGRVIRHRNDFGVILFLDKRFAEQGTISQLSKWVRNRVDTLREFRK 725
Query: 702 AHLNLSTDMALH 713
A + +S+ H
Sbjct: 726 AIVGVSSFFQAH 737
>gi|116179420|ref|XP_001219559.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
gi|88184635|gb|EAQ92103.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 163/671 (24%), Positives = 273/671 (40%), Gaps = 121/671 (18%)
Query: 109 LSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAA 168
LSSR+ LC+N V+ + +++ C + S + + PN E + ++ AA A
Sbjct: 160 LSSRQKLCINPSVVRLGSLSAINDRCTELQQSKTKDKCSFMPNTENLKQAHDFRDAALAT 219
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
V ++DL GK+ CPY+ +R + A V+ Y LL + +++
Sbjct: 220 V-----PDIEDLHRIGKELQVCPYYASRTAIPGAEVITLPYPLLLQKNARDALGIKLEG- 273
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEY 285
+VV+ DEAHN+ + + + L A + LS ++RF G R A+
Sbjct: 274 NVVIIDEAHNVMDAVANVYAAEICLSELRRARQMLSIY---VKRFGKKLKGENRVMIAQV 330
Query: 286 NRLVEGLA--LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE 343
++VE L+ L L P+ +LK R A+ L +L++Y++
Sbjct: 331 GKVVESLSACLNEQLNIKGDQGIVDPNTVLK------ARGADQI--NLYQLIKYIQDSKL 382
Query: 344 TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFAT 403
+E S +HA +++ + + + + LH T+ F T
Sbjct: 383 AYKIE---------SYVSHAENQEESSSSAHGK---------PSPSTPVLH--TLVSFLT 422
Query: 404 LVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID 463
+ + I E P I L LS +A + ++V++ GT+SP +
Sbjct: 423 ALTNLSSEGRIFSEKLATTPPDIKLSYLLLSPTNA---FSSIASSARAVILAGGTMSPFE 479
Query: 464 -----LYPRL-------LNFHPVVSRS--FKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
L+P L+ V+ S F +L T +D S F R
Sbjct: 480 DYKAHLFPSFPTDKITTLSCGHVIPSSNLFGWTLASTTPT-TPGTTNADSFEFS--FQKR 536
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN------DSGILKEIMQHK 563
+PG+ R G L+ + S+VPDG+V FF S+ Y+DE++A W + + K
Sbjct: 537 REPGMIRQLGLALLNICSVVPDGVVVFFPSHGYLDEVVAAWQTQETPTQPPLWDRLAGKK 596
Query: 564 LVFIET-----QDVVE-------------TTLALDNYRKACDCGR---GAVFFSVARGKV 602
VF ET +DV++ +L ++A R GA+ SV GK+
Sbjct: 597 AVFRETKGGVSEDVLQQYSDAILFPAAAAAPPSLGGSQQAATKPRRPGGALLLSVVGGKL 656
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT--------------------- 641
+EGI+F GR V++ G+P+ S ARLEY+ T
Sbjct: 657 SEGINFSDRLGRCVVVVGLPYANINSPDWKARLEYIEATEMERLMEGEGKGKGEGGVGGA 716
Query: 642 -----------FQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK 690
+ DF +R Q +GR IR +ADY ++ D+R++ + K
Sbjct: 717 PPRGEAEARALAKQAARDFYENACMRAVNQSIGRAIRHRADYAAVVLVDRRFATERIKGK 776
Query: 691 LPGWILSHLRD 701
LPGWI + + +
Sbjct: 777 LPGWIRAGMEE 787
>gi|260946235|ref|XP_002617415.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
gi|238849269|gb|EEQ38733.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
Length = 825
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 144/307 (46%), Gaps = 22/307 (7%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
LQ D S+ + V + + V++ GT+ P+D + L P + + + T D +
Sbjct: 515 TLQYILLDPSIIFEDVLSQAKCVLLCGGTMEPMDDFKSYL--FPNIPSNLVKTFTCDHLI 572
Query: 490 P-----MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
P + + ++ L F RS P + R G L+ + +P G+V FF SY Y+
Sbjct: 573 PKENLKVFAVKATNNLDFEFSFQKRSQPSMMRELGLLIARLCQSIPSGVVIFFPSYKYLS 632
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG-RGAVFFSVARGKVA 603
+ + W+ SGIL+ I K VF E +D E L Y A +GA F+V GK+A
Sbjct: 633 HVFSLWSSSGILERISSSKTVFQEPKDSQEVESTLQEYSNAVKSSFKGAALFAVVGGKMA 692
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----------DFLTF 652
EGI+F R VI+ G+P+ + L+A+ ++ T I +G DF
Sbjct: 693 EGINFADDLARGVIVVGLPYPNAAATDLVAKQNHIVRTL-IAKGKSRSEAANASRDFYEN 751
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
+R Q +GR IR DY + D+RYSR + R KL W+ + L D+ N+ D +
Sbjct: 752 ICMRAVNQSIGRSIRHANDYSTIFLIDQRYSRKNIRQKLSKWVRNQLSDSDQNI--DEII 809
Query: 713 HIAREFL 719
H +F
Sbjct: 810 HSTEKFF 816
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQT-RHLGPAAKILAIGLSSRKNLCVNS 119
L PE P +++ +RT ++ + +L+L + + + K +A+G SRK LC+N
Sbjct: 192 LYPPECPHTILFSSRTHSQLYQFAHQLQLPSFHSSLEEITEYTKFVALG--SRKQLCIND 249
Query: 120 RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP------- 172
+V + N +S++ AC V + P C+FF K+ +
Sbjct: 250 KVRSLGNLNSINDAC-------VDLQKKDQP----CDFFPKITKSGVSEKTKSFIDNCFV 298
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
V ++D+ + GK+ CPY+ R+ +A ++ YQ LL + +++ S+VV
Sbjct: 299 KVNDIEDVASLGKKLEICPYYTVRNATDYAEIIALPYQLLLSKSARESLDLKIE-NSIVV 357
Query: 233 FDEAHNI 239
DEAHN+
Sbjct: 358 IDEAHNL 364
>gi|310791719|gb|EFQ27246.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 897
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 171/713 (23%), Positives = 285/713 (39%), Gaps = 121/713 (16%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLL--------HNYQTRHLGP-AAK--ILAIGLSSRKNLC 116
+K+ Y +RT ++ + + EL+ Q R G AAK + + LSSR+ LC
Sbjct: 206 IKIYYTSRTHSQLTQFIHELRRPTFPSSIPPSVVQGRSKGEDAAKEPVKHLPLSSRQKLC 265
Query: 117 VNSRVLAAENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP 172
+N V +++ C + ++ E+ +T +F + + A LP
Sbjct: 266 INPSVARLGTLSAINDRCSELQKPKSKDKCPYTLKEDNVAQTHQF-----RDTAHATLP- 319
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
++DL GK+ CPY+ +R V A ++ Y LL + +++ +VV+
Sbjct: 320 ---DIEDLYHLGKKLSICPYYASRAAVAGAEIITLPYPLLLQKNARDALGIKLEG-NVVI 375
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLV 289
DEAHNI + + ++ L A + L + RF G R + R++
Sbjct: 376 VDEAHNIMDAVANVYASEIKLSELRQARQMLGVY---VRRFGKKLKGENRVMVGQVGRVI 432
Query: 290 EGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV-LRRLVQYLRGRLETENVE 348
EGL+ W+ + + R + + L RLVQY++ E++
Sbjct: 433 EGLS-------EWMDGQSKLKSTQGIVDSKVLLRCKGVDQINLFRLVQYIQ---ESKLAY 482
Query: 349 K-EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
K E V+ V AG + R LH T+ F +
Sbjct: 483 KIESYVAHVEEEAVGAGHGKPPSRSSAPVLH------------------TLSSFLISLTN 524
Query: 408 YTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY-P 466
+ I E P I L LS + A + ++V++ GT+SP + Y
Sbjct: 525 LSSEGRIFYEKLATDPPDIQLSYLLLS---PTHAFSSIATSARAVILAGGTMSPFNDYKS 581
Query: 467 RLLNFHP-----VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDM----RSDPGVARN 517
L + P +S + + C+ + +++ F+ R + N
Sbjct: 582 HLFPYLPESKLTTLSCGHVIPPSNLCVWTLAGPEPGPNRDINSTFEFSFQRRGEASTMSN 641
Query: 518 YGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG------------ILKEIMQHKLV 565
G ++ M ++VPDG+V FF SY Y++E++ W +G I + Q K V
Sbjct: 642 LGMAILNMCNVVPDGVVVFFPSYGYLEEVVTAWKGAGPRNSQGQNGASSIWDRLQQRKAV 701
Query: 566 FIETQ-----DVVET-TLAL-----DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
F ET+ +V+E + A+ + + A RGA+ SV GK++EGI+F GR
Sbjct: 702 FSETRGGSSDEVLEAYSRAILGDGSEPHSGAAAKPRGALLLSVVGGKMSEGINFSDRLGR 761
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTF-----------------------QIKEGDFLT 651
VI+ G+P+ S A+ EY+ T + DF
Sbjct: 762 CVIIVGLPYPNINSPEWKAKTEYIESTTVQRLTDPSLGTAQMAREEAEAVAKQAARDFYE 821
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR-DAH 703
+R Q +GR IR + DY ++ D+RY R KLPGWI L D+H
Sbjct: 822 NACMRAVNQSIGRAIRHQGDYAAIVLVDRRYGTDRIREKLPGWIRGGLNGDSH 874
>gi|394994901|gb|AFN42925.1| XPD1 protein, partial [Plasmodium falciparum]
Length = 437
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 61/261 (23%)
Query: 96 RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN------ 149
+ G ++ILAIG+S+R+ +C+N +VL R+ +D CRK TA+++R N
Sbjct: 168 KEFGENSEILAIGISARRCMCINDKVLLKHEREKIDEECRKLTATFIREKKYINNKIDNE 227
Query: 150 ---PNIET-----------------------------------CEFFENYEKAASAAVLP 171
PN++ C ++ENY+K ++
Sbjct: 228 IYHPNVDKISDFILRNRHHLDIEDYFDIYNSRNSLEEYDNIGLCGYYENYKKEFLYDLIK 287
Query: 172 PGVYTLQDLRAFGKQQG--------WCPYFLARHMVQFANVVVYSYQYLLDPKVAGIIS- 222
PGVYT++DL+ K CPYF A+ +++ + V++ +YQY++ PKV+ +
Sbjct: 288 PGVYTIEDLKVLCKNYKNKENVNVPICPYFCAKKIIEISKVIILNYQYVIVPKVSKALFS 347
Query: 223 -KEMQKE-------SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
K+M K ++VFDEAHNID+VC+EALSV++ R L A+ N++++ ++IE+ K
Sbjct: 348 WKDMNKNVHLKNKNDIIVFDEAHNIDSVCLEALSVNIDRNILNKASMNITKLMKKIEQSK 407
Query: 275 ATDAGRLRAEYNRLVEGLALR 295
+ +L+ E N+++E + L+
Sbjct: 408 MLNEQKLKEECNKILEKIKLQ 428
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
++F L+DV ++FPYD IYPEQY+YM LK+ LD++GHC+LEMPTGTGKT+A+ SLITSY
Sbjct: 2 VVFNLDDVEIFFPYDYIYPEQYAYMKYLKKTLDSEGHCVLEMPTGTGKTVAIFSLITSYQ 61
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ 94
K + K I+CTRTV EMEK+L ELK + Y+
Sbjct: 62 YHKKDEG-KFIFCTRTVAEMEKSLIELKKVIQYR 94
>gi|328772350|gb|EGF82388.1| hypothetical protein BATDEDRAFT_22849 [Batrachochytrium
dendrobatidis JAM81]
Length = 996
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 152/296 (51%), Gaps = 33/296 (11%)
Query: 428 DPVLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYP---------RLLNFHPVVSR 477
D +L C ++ +A++ + + +S+V+ SGTLSP+D + RL N H +
Sbjct: 388 DILLSFWCFNSGVAMQELKRMKVRSIVVASGTLSPLDGFSDEMGIPFPHRLENTHVIDQS 447
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
+S V+T+GS +P+ST + R + +G ++E IVPDG++ FF
Sbjct: 448 QVYIS---------VVTKGSQNIPISTAYKSRETNNSTKEFGNAIIEFAKIVPDGMLVFF 498
Query: 538 VSYSYMDEIIATW----ND---SGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR 590
SYS M+ I+ W ND I + I + K +E+++ E LA+ ++ + D +
Sbjct: 499 TSYSIMNTCISVWKQPSNDLISKSIWESISELKYPIMESRNQQEFVLAMKSFEERIDQKK 558
Query: 591 G--AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQ 643
+FF++ RG+V+EGIDF GR V+++G+P+ ++ + +YL + +
Sbjct: 559 WPPPIFFAICRGRVSEGIDFSDRKGRAVVIYGIPYPTYKDPNVMLKQKYLDSAAAKSQGR 618
Query: 644 IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
I+ ++ A R Q +GRVIR K D+G ++ D+R+ LP W+ S +
Sbjct: 619 IRGKEWYLQQACRSVNQAIGRVIRHKNDFGAILLCDERFQETKTIRNLPHWLRSSI 674
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 60/269 (22%)
Query: 4 KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIAL----LSLITSY 59
++ + V FP+ YP+Q + M + AL + L+E PTGTGKT+ L L+ ++Y
Sbjct: 20 EINRIAVQFPFQP-YPQQNALMTTIINALQKSENALVESPTGTGKTLCLLCSTLAWRSTY 78
Query: 60 VLSKPE--------------------------------NPVKLIYCTRTVHEMEKTLAEL 87
+L + E P ++ + +RT ++ + ++EL
Sbjct: 79 MLWRKEAMRSETERDTLVLDQLSMQAFGSMHSDDRPIGKPPQIFFASRTHSQLSQAISEL 138
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
+ N R+ A +G SR +C+N V +N AS +++
Sbjct: 139 R---NTAYRN----AVCTVVG--SRDQMCINPAVAQVKN---------TLRASLCKSMVQ 180
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+ +TC + E + A + ++DL FG+++ CPY++++ + A+++
Sbjct: 181 K----QTCSYHAESEGLHNHAAATALIMDIEDLVVFGRERKACPYYMSKAIQPRADIIFL 236
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEA 236
Y YL+D + ++ S+++FDEA
Sbjct: 237 PYNYLVDRNSRNSQNFSLE-NSIIIFDEA 264
>gi|18977305|ref|NP_578662.1| DNA repair helicase rad3 [Pyrococcus furiosus DSM 3638]
gi|18892976|gb|AAL81057.1| DNA repair helicase rad3, putative [Pyrococcus furiosus DSM 3638]
Length = 631
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 173/712 (24%), Positives = 305/712 (42%), Gaps = 121/712 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY+ + P Q ++ +K A+ + ++E PTG GKTI++L+ + Y +S K+
Sbjct: 6 YFPYERLRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISL---GYKV 62
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + ELK + ++ I SR++LC++S +
Sbjct: 63 VYLARTHKQMDRVIEELKKIRERN--------EVSGIEFRSRRDLCLHSYIQTFVQ---- 110
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENY-EKAASAAVL-------PPGVYTLQDLRA 182
DA +R L C FFEN EK + PP + + +
Sbjct: 111 DAYTSMIVCKTLRKLG-------KCPFFENIKEKRDRVEEIVRFFLNSPPFPHEVLE--- 160
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNI 239
+ + CPY + + + + ANV+V SY Y++ P + + + + +V+FDEAHN+
Sbjct: 161 YSELLELCPYEITKKIGEKANVIVASYLYMISPPIRQAFLENLGVDYSDLIVIFDEAHNL 220
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEYNRLVEGLALRGNL 298
+ I ALS + +++E A + + +IE F + L+ GL + L
Sbjct: 221 PDQAISALSDRLSIRSIERAIKEAEEYGEKDIENFLSI-----------LLRGLEI---L 266
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL-------RRLVQYLRGRLETENVEKEG 351
L N E VP IR E FLHV R + L +E + +E
Sbjct: 267 YKEKLENYE------SEEVP--IRPEEVFLHVASVLGWSGREIGMMLEDMIEVGDAIRED 318
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
+ ++ G + F + L + + +++LH+ T RG
Sbjct: 319 RIERNLPPRSYVG---RVGEFLWN-------WLALREREDYLHL----------FTKERG 358
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF 471
+ L+L D S+A++ + S + SGTLSP++ + ++
Sbjct: 359 LA-----------------LELVALDPSVALE-FLEEVHSAIFMSGTLSPLEAFRDIIGV 400
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
+ + +M + I +++ R VST+ RS P + R + + E V P
Sbjct: 401 KAELKKFPRMIKRENAI--VLVARD-----VSTRGIERS-PSLYRRISEYIFEAVRNTPK 452
Query: 532 GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACDCG 589
+ F SY ++ I++T I +EI K VFIE +D E + +++ G
Sbjct: 453 NVGVFTASYEVLEGILSTNVHIKIEEEI--GKKVFIEKRDAPSRENDEMIRAFKEESK-G 509
Query: 590 RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF 649
+GAV F V G+ +EG D+ V++ G+P+ ++ A++ Y F K G +
Sbjct: 510 KGAVLFGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPTPRV-QAQIRYFEKKFPGK-GRY 567
Query: 650 LTF--DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+ A R+ Q GRV RS+ + G ++ D R + LP W++ +
Sbjct: 568 YGYVLPAHRKLTQAAGRVHRSEEEKGSIVILDYRVLWKSVKKDLPDWMVETM 619
>gi|397651437|ref|YP_006492018.1| DNA repair helicase rad3 [Pyrococcus furiosus COM1]
gi|393189028|gb|AFN03726.1| DNA repair helicase rad3 [Pyrococcus furiosus COM1]
Length = 647
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 177/739 (23%), Positives = 309/739 (41%), Gaps = 125/739 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY+ + P Q ++ +K A+ + ++E PTG GKTI++L+ + Y +S K+
Sbjct: 6 YFPYERLRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISL---GYKV 62
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + ELK + ++ I SR++LC++S +
Sbjct: 63 VYLARTHKQMDRVIEELKKIRERN--------EVSGIEFRSRRDLCLHSYIQTFVQ---- 110
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENYEKAA-----------SAAVLPPGVYTLQD 179
DA +R L C FFEN ++ ++ P V +
Sbjct: 111 DAYTSMIVCKTLRKLG-------KCPFFENIKEKRDRVEEIVRFFLNSPPFPHEVLEYSE 163
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEA 236
L CPY + + + + ANV+V SY Y++ P + + + + +V+FDEA
Sbjct: 164 LLEL------CPYEITKKIGEKANVIVASYLYMISPPIRQAFLENLGVDYSDLIVIFDEA 217
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
HN+ + I ALS + + R++ R +E E + D + L+ GL +
Sbjct: 218 HNLPDQAISALSDRL-------SIRSIERAIKEAEEYGEKDIENF---LSILLRGLEI-- 265
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL-------RRLVQYLRGRLETENVEK 349
L L N E VP IR E FLHV R + L +E + +
Sbjct: 266 -LYKEKLENYE------SEEVP--IRPEEVFLHVASVLGWSGREIGMMLEDMIEVGDAIR 316
Query: 350 EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYT 409
E + ++ G + F + L + + +++LH+ T
Sbjct: 317 EDRIERNLPPRSYVG---RVGEFLWN-------WLALREREDYLHL----------FTKE 356
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL 469
RG + L+L D S+A++ + S + SGTLSP++ + ++
Sbjct: 357 RGLA-----------------LELVALDPSVALE-FLEEVHSAIFMSGTLSPLEAFRDII 398
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
+ + +M + I +++ R VST+ RS P + R + + E V
Sbjct: 399 GVKAELKKFPRMIKRENAI--VLVARD-----VSTRGIERS-PSLYRRISEYIFEAVRNT 450
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACD 587
P + F SY ++ I++T I +EI K VFIE +D E + +++
Sbjct: 451 PKNVGVFTASYEVLEGILSTNVHIKIEEEI--GKKVFIEKRDAPSRENDEMIRAFKEESK 508
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
G+GAV F V G+ +EG D+ V++ G+P+ ++ A++ Y F K G
Sbjct: 509 -GKGAVLFGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPTPRV-QAQIRYFEKKFPGK-G 565
Query: 648 DFLTF--DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLN 705
+ + A R+ Q GRV RS+ + G ++ D R + LP W++ + L
Sbjct: 566 RYYGYVLPAHRKLTQAAGRVHRSEEEKGSIVILDYRVLWKSVKKDLPDWMVETMIPVTLP 625
Query: 706 LSTDMALHIAREFLRKMAQ 724
R+ L +M Q
Sbjct: 626 TMRIKLRRFWRDRLNEMGQ 644
>gi|14590576|ref|NP_142644.1| hypothetical protein PH0697 [Pyrococcus horikoshii OT3]
gi|3257105|dbj|BAA29788.1| 641aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 641
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 172/720 (23%), Positives = 304/720 (42%), Gaps = 137/720 (19%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY+ P Q ++ +K A+ + ++E PTG GKTI++L+ + Y +S K+
Sbjct: 6 YFPYEKFRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISL---GYKV 62
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + EL R +G +++ I SRK+LC+++ + +
Sbjct: 63 VYLARTHKQMDRVIEEL--------RKIGEKSEVSGIEFRSRKDLCLHAYIQTF----AQ 110
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENYEKAASAA--------VLPPGVYTLQDLRA 182
DA +R L C+++EN ++ PP +++
Sbjct: 111 DAYTSMIVCKSLRKLG-------KCKYYENLKEKRDRVDEIVKFFLSFPP---FPREVIE 160
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNI 239
+ + CPY + + + + ANVVV SY Y++ P + + + + +V+FDEAHN+
Sbjct: 161 YSELLELCPYEITKKVGEKANVVVASYLYMISPPIRQAFLENLGVDYSDLIVIFDEAHNL 220
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEYNRLVEGLALRGNL 298
+ I ALS + +++E A + + +IE F + L+ GL + L
Sbjct: 221 PDQAISALSDRLSVRSIERAIKEAEEYGEKDIENFLSI-----------LLRGLEI---L 266
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL-------RRLVQYLRGRLETENVEKEG 351
L N E +P IR E FLH R + L +E + +E
Sbjct: 267 YKEKLENYE------SEEIP--IRPEEVFLHPASILGWRGRDIGMMLEDMIEVGDAIRED 318
Query: 352 PVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRG 411
+ ++ G + F + L + D +++LH+ T +G
Sbjct: 319 RIERNLPPRSYVG---RVGEFLWN-------WLSLRDREDYLHL----------FTKEKG 358
Query: 412 FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY------ 465
+ L+L D S+A+ + S + SGTLSP++ +
Sbjct: 359 LA-----------------LELVALDPSVALD-FLEEVHSAIFMSGTLSPLEAFRDIIGV 400
Query: 466 -PRLLNFHPVVSRSFKMSLT-RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLV 523
RL F +V R + L RD V TRG ++ P + + + +
Sbjct: 401 NARLKKFPRIVKRENAIVLVARD-----VSTRGIER-----------SPPLYKRIAEYIF 444
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDN 581
E V P + F SY ++ +++T I +E+ K VFIE +D E +
Sbjct: 445 EAVKNTPKNVGVFTASYEVLEGVLSTNVHIKIEEEV--GKKVFIEKKDAPSRENDEMIRE 502
Query: 582 YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT 641
+++ G+GAV F V G+ +EG D+ VI+ G+P+ ++ A+ Y
Sbjct: 503 FKEESK-GKGAVLFGVMGGRNSEGQDYSGDEMNGVILVGIPYARPTPRV-QAQTRYFEKK 560
Query: 642 FQIKEGDFLTF--DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
F K G + + A R+ AQ GRV RS+ + G ++ D R + + LP W++ +
Sbjct: 561 FPGK-GRYYGYILPAHRKLAQAAGRVHRSENEKGSIVILDYRVLWKNVKKDLPDWMVETM 619
>gi|353235657|emb|CCA67667.1| related to CHL1-protein of the DEAH box family [Piriformospora
indica DSM 11827]
Length = 769
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 146/605 (24%), Positives = 261/605 (43%), Gaps = 86/605 (14%)
Query: 68 VKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
K+ Y +RT ++ + E KL H + P A+++ +G SRKNLC+N L A+
Sbjct: 194 TKIFYTSRTHSQLSQLQVEFEKLKHLPSQANDRPIARVVPLG--SRKNLCINEE-LRAKG 250
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT----LQDLRA 182
D +D CR+ + + C + ++ A L + ++DL
Sbjct: 251 GD-LDEGCRE---------LIQEKGKKRCPYLPPAGDISAMADLRDQILATPRDIEDLAQ 300
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
GK+ CPY+ +R ++ A +V Y LL + + ++ ++V++ DEAHN+ +
Sbjct: 301 LGKELKTCPYYGSRKAIKQAELVTLPYNLLLQKQARETLGVDLTDQTVII-DEAHNLIDT 359
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA--------L 294
+ +VS+ L+ ++L ++ ++RF+ + RLVE L L
Sbjct: 360 ILSIHTVSLPHSVLK---KSLEQLRIYLQRFRKMLTPQHALHLRRLVEFLVAVDKYCNDL 416
Query: 295 RGNLPNAWLSNPALPSD---ILKEAVPG-NIRRAEHFLHV--LRRLVQYLRGRLETENVE 348
A N P + +L E V G N+ E +L + R V +L + +
Sbjct: 417 ATQFTGAETENMMTPGEMIAVLGEKVQGINLLEIEKYLRTSKIARKVSGYSDKLAAKEAQ 476
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY 408
G T H G + S ++TL + D LV T
Sbjct: 477 AAGK-------TFHQGTTPP-----LHLVQSWIVTLSNANED-----------GKLVITV 513
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPR 467
+R + PD L+ + S + + D +SVV+ GT++P+ D + +
Sbjct: 514 SRSKA-----------SSPDVTLKYQLLNPSRVFRDIVDSARSVVLAGGTMAPMSDFHSQ 562
Query: 468 LLNFHPVVSR------SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKL 521
L+ P +S S + + + +V++RG + K + DP V G++
Sbjct: 563 LV---PYLSEDRISLFSCGHVMPEENLKTVVVSRGPTGKGLVYKHQQQKDPAVMDELGQI 619
Query: 522 LVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN 581
L +V+IVPDG+V FF SY++++ + A W +G L+ + K +F E Q+ L
Sbjct: 620 LANLVNIVPDGMVVFFPSYNFLNALRARWGGNGTLERLKNKKKLFFEPQEGGSVDAVLQE 679
Query: 582 Y------RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARL 635
Y +K D GA+ +V K++EG++F R V++ G+PF S L R+
Sbjct: 680 YTDAIRLKKPEDKQTGALLLAVVGAKLSEGLNFSDELSRAVVVVGLPFANATSIELKERM 739
Query: 636 EYLRD 640
++++
Sbjct: 740 RFVKE 744
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVK 69
FPYD Y Q M L A++ K ++E PTGTGKT++LLS +++ + VK
Sbjct: 15 FPYDKPYNIQLDLMRHLFAAIEGKQVAVVESPTGTGKTLSLLSGSLTWLQDEKSRAVK 72
>gi|452840275|gb|EME42213.1| hypothetical protein DOTSEDRAFT_81172 [Dothistroma septosporum
NZE10]
Length = 836
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 176/709 (24%), Positives = 298/709 (42%), Gaps = 114/709 (16%)
Query: 40 LEMPTGTGKTIALLSLITSYVLSKPE---------NPVKLIYCTRTVHEMEKTLAELKLL 90
+E P + +T ++ + +L +PE + +K+ +C+RT ++ + + EL+ +
Sbjct: 157 IEQPQYSAETTRMMQKMG--MLPRPETRQNLDDDIDELKVFFCSRTHSQLSQFVGELRRV 214
Query: 91 H----------NYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTAS 140
+ + ++ + SRKNLC+NS+V N+ S A +R
Sbjct: 215 RMPPALPSEKTDGRDDSEQSTEQLKHLTFGSRKNLCINSKV----NQLSSQVAINERCIE 270
Query: 141 WVRALAAENPNIETCEFFENYEKAASAAVLP------PGVYTLQDLRAFGKQQGWCPYFL 194
+A E C + K A VL + ++DL G ++ CPY+
Sbjct: 271 LQQAKTVET----KCPYMPT--KDNEAQVLEFRDHALAKIRDIEDLAQLGAKREICPYYA 324
Query: 195 ARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQ 254
+R V A +V Y LL + + K VV+ DEAHN+ N S +
Sbjct: 325 SRPAVGPAEIVTLPYPLLLQKSAREALGISV-KGHVVIIDEAHNLMNAVESTYSAQISDL 383
Query: 255 TLEGATRNLSRINQEIERFKATDAGRLRA---EYNRLVEGL---ALR---GNLPNAWLSN 305
L+ A L ++RF+ G R+ + R+V+ L A R GN+ +S
Sbjct: 384 QLKRARDALIAY---LQRFRHRLKGSNRSYVTQVVRVVDALLQFATRMRQGNVNGGTIS- 439
Query: 306 PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGI 365
PS +L I L +LV+Y+ VE G V FVA+I A
Sbjct: 440 ---PSALLAGKGVDQIN--------LAKLVRYINDSRLARKVE--GYVKFVATIEAEQTR 486
Query: 366 DQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPH 425
Q +R E+ D H+Q TL+ G +
Sbjct: 487 SQTK---SNDRG-------EVVDVPTLTHVQNF--LLTLMNPSREGRFL--------WSK 526
Query: 426 IPDPV-LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL--NFHPVVSRSFKMS 482
+ D V LQ D S + + + +SV++ GT+SP+D Y + L H + +
Sbjct: 527 MEDGVALQYLLLDPSEHFREIVEDARSVILAGGTMSPMDDYRQQLFPYLHSI------QT 580
Query: 483 LTRDCICP----MVLTRGSDQLP-VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
+ D + P V SD+ + F R+D R G ++++ V G+V FF
Sbjct: 581 FSCDHLIPPSSLFVRAISSDEYGRIDFSFKARNDTSAVR-LGNSILQISRKVKGGMVVFF 639
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDC----GRGAV 593
SY Y++++++ W I + K +F++ + + A D +R + RGAV
Sbjct: 640 PSYGYLEKVLSIWASQKIKSRLEGLKALFLDGRAMS----AEDTFRAYSETIANDPRGAV 695
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK---EGDFL 650
SV GK++EGI+F + GR V++ G+P+ + +A+++YL D + +G
Sbjct: 696 LLSVIGGKLSEGINFSDNLGRCVVVVGLPYPNLETPEWIAKMQYLDDKAACRGEAKGKAS 755
Query: 651 TFDA----LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
A +R Q +GR IR K D+ ++ D RY+ ++KLP WI
Sbjct: 756 REHAENVCMRSVNQAIGRAIRHKNDWASILLFDARYAEGRVQTKLPRWI 804
>gi|342180293|emb|CCC89770.1| putative helicase [Trypanosoma congolense IL3000]
Length = 965
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 147/287 (51%), Gaps = 21/287 (7%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
L C D S ++K V D S+++TSGTLSP+D + L H V + + +
Sbjct: 422 TLSYWCMDISRSIKGVVDSTHSLLLTSGTLSPLDHFAMELGIHFEVRLKGDHVIEQKQVV 481
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
VL +G ++ + R G G LV + ++ P G++ FF SY M+ +
Sbjct: 482 ASVLCKGPGGERLNGSYAFRCGAGYRGAIGATLVNISTLTPGGMLVFFPSYVAMNAAVDL 541
Query: 550 W-NDSGILKE-------IMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVAR 599
W SG + E ++++K VF+E + + L +Y++ D RGA+ +V R
Sbjct: 542 WRTGSGRVGETETIWAALVKNKPVFVEPGNAEDANTVLKSYQQEVDKDPTRGALLLAVCR 601
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR--DTFQIK-EGDFLTFD--- 653
G+ EG+DF H+GR V++ G+PF ++ + EY+ T + K +G T D
Sbjct: 602 GRTGEGVDFADHHGRCVVVVGIPFANCTDLLVRLKREYITRVATHRPKVDGKLFTGDEWY 661
Query: 654 ---ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
A+R +QC+GRVIR + DYG ++ AD+R++ D+ + LP W+ S
Sbjct: 662 VNEAMRSVSQCIGRVIRHRNDYGAIVLADERFA--DRMNCLPKWVAS 706
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 136/275 (49%), Gaps = 36/275 (13%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV---- 60
++++ V FP+ + Y Q YM + R+L + LLE PTGTGKT+ LL +++
Sbjct: 6 IDNIEVAFPF-SPYTVQVEYMQAVLRSLKGAHNALLESPTGTGKTMCLLCATLAWLEDWR 64
Query: 61 -------LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRK 113
+ P +++YC+RT ++ + + E + +TR+ + +A+ L SR
Sbjct: 65 AYCRSNGFNDPTLLRRVVYCSRTHAQLTQVIREFE-----RTRY--SSCFSMAV-LGSRD 116
Query: 114 NLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA---SAAVL 170
++CVN +V+ ++ + C S +R E N C FF Y+ + ++ +
Sbjct: 117 HMCVNPQVVRLPSQHAQQKMC-----STLR----EERN---CRFFRGYQGYSDNKNSLMD 164
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
V+ ++DL G++ G CPYF R + A++V Y Y+ D + + E+ S+
Sbjct: 165 EFWVHDMEDLVKEGQKCGLCPYFYERDKARDADIVFLPYNYVFDTSLRKQLPFELSG-SI 223
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
++ DEAHN+ +V ++++ L A + SR
Sbjct: 224 LIVDEAHNLPSVLGAVSGMNLQPLDLTNAIHDCSR 258
>gi|401827400|ref|XP_003887792.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998799|gb|AFM98811.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 618
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 167/729 (22%), Positives = 298/729 (40%), Gaps = 143/729 (19%)
Query: 17 IYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVK------- 69
+Y Q ++ + +R ++ G + PTGTGKT++LL+ + Y+ P
Sbjct: 5 LYEGQKQFIRDARRVVEDGGVGIFSSPTGTGKTMSLLNAVMDYIGGDGAEPGSRSKALEQ 64
Query: 70 ---------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ YCTRT ++ + + ELK L + A+ L SR+ C+N +
Sbjct: 65 TLFQGSAGTVFYCTRTHTQLSQAVNELKRL----------GVRCNAVILGSRRVYCLNEK 114
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
VL +N D+++ CR+ + C F++ S G+ ++D
Sbjct: 115 VLQHKNSDAMNEGCRQIVREGL------------CAFYD-----GSDLFDGHGILDVEDF 157
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ-KESVVVFDEAHNI 239
G++Q CPY+ ++ ++V YQ L + G S ++ + S+V+ DEAHNI
Sbjct: 158 GLIGREQKLCPYYASKRYSHRCDIVFLPYQLLFTRE--GRKSADIDVRGSIVIVDEAHNI 215
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP 299
+ I+ + SV T +SR + +E + R Y++ +G
Sbjct: 216 CDSVIQMNTSSVLFVT-------ISRYVKAMELY--------RERYSKRAKGDG------ 254
Query: 300 NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI 359
+ E + VLRR+ + G L +V +E V V+
Sbjct: 255 -----------------------KLERVMEVLRRIEGF--GALHCRSVGEEERVVGVSEF 289
Query: 360 TAHAGIDQKTLRFCYERLHSLMLT--LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
GI+ + + + S ++ LE D L + I F +L+ R I
Sbjct: 290 LLKTGIEDFNMLEIEDYIASSGISRKLEGLGRDLNLQLPEISKFLSLLTMSDRSGRIFYT 349
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
R+ P DAS+ + V + +S+++ GT+ P+D V++R
Sbjct: 350 S--RRIKFTP--------LDASMYFEDVLE-CRSLLLAGGTMEPVD------QLASVLAR 392
Query: 478 SFKMSLTRDCIC----PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD-G 532
M + +C P+V+ G V ++ R ++ ++ + V D G
Sbjct: 393 RNPMYFSYKSVCNDFLPIVVPSGPSGREVVVNYETRESLESVKDVASSILNFSNAVRDGG 452
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGA 592
+VCF S +Y+ + D I + ++++ + D E A + + AC
Sbjct: 453 MVCFLPSKAYLKILREACGD-----RIGRKRVLYEDLTDFQE--YASEVKKGAC------ 499
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF 652
+ F+V GK++EGI+F + RL+++ GVP+ LE L++ + T
Sbjct: 500 ILFAVMGGKLSEGINFSDNLCRLLMVVGVPYPNQ-------DLE-LKERIGFNGNGYTTM 551
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
A+R Q +GR +R K DY +++ DKRY +L I S +R+ + L
Sbjct: 552 LAMRVVNQTLGRALRHKNDYAVLVLLDKRY------IQLSKLISSWVREKAICCGFGDGL 605
Query: 713 HIAREFLRK 721
A FL K
Sbjct: 606 LRASRFLNK 614
>gi|346975762|gb|EGY19214.1| fanconi anemia group J protein [Verticillium dahliae VdLs.17]
Length = 838
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 160/657 (24%), Positives = 256/657 (38%), Gaps = 158/657 (24%)
Query: 109 LSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAA 168
LSSR+ LC+N V + + +++ C + + P E + A A
Sbjct: 240 LSSRQKLCINPAVSRLKTQSAINDRCAELQQPKSKNKCPYVPKEENLNKTHQFRDTAHA- 298
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
LP ++DL GK CPY+ +R + ++ Y LL + +++
Sbjct: 299 TLP----DIEDLFHLGKSLEVCPYYASRTAIAGTEIITLPYPLLLQKTAREALGIKLEG- 353
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRL 288
++V+ DEAHNI + + +R L+ A L ++RF +L+ E NR+
Sbjct: 354 NIVIVDEAHNIMDAVANVYASEIRLGELKRARLMLGVY---VKRF----GKKLKGE-NRV 405
Query: 289 VEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR--------- 339
+ G +G + ++L+ I L +L+QY++
Sbjct: 406 MVGQPEQGIVD---------AKELLRSKGIDQIN--------LFKLIQYIQTSKLAYKIE 448
Query: 340 ---GRLETENVEKEGP----------VSFVASITAHAGIDQKTLRFCYERLHSLMLTLE- 385
+E ++ K P VSF+ S+T + R Y++L ++
Sbjct: 449 SYVAYVEEDDSNKAAPRSSTPVLHTFVSFLVSLTNLS----SEGRIFYQKLPGAAPDIQL 504
Query: 386 ----ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER----MPHIPDPVL-QLSCH 436
++ T F I T L G + PFD+ P++P+P L L C
Sbjct: 505 SYLLLSPTHAFSSIATSARAVILAGG-------TMSPFDDYRAHLFPYLPEPKLTTLRC- 556
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
+ P +L C+ + +R
Sbjct: 557 -------------------GHVIPPSNL----------------------CVRTLAASRA 575
Query: 497 SDQLPVST---KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
D P ST F RSD + G ++ M ++VPDGIV FF SY Y+DE++A W +
Sbjct: 576 GD--PNSTFEFSFQRRSDKAMVNQLGLAILNMCAVVPDGIVVFFPSYGYLDEVVAAWETT 633
Query: 554 G------ILKEIMQHKLVFIETQDV-VETTLALDNYRKA--------CDCGRGAVFFSVA 598
I + Q K VF E++ E LAL Y +A RGA+ SV
Sbjct: 634 AAGESTPIWTRMQQRKAVFKESKGASSEEVLAL--YSEAILGDGTSDAPKPRGALLLSVV 691
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY-----LRDTFQIKEG------ 647
GK++EGI+F GR V++ G+P+ S A+ EY L+ + + G
Sbjct: 692 GGKMSEGINFSDRLGRAVMVVGLPYPNMHSPEWKAKTEYVEMTVLKRALEAEPGVDRAKA 751
Query: 648 ---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
DF +R Q +GR IR + DY +I D+RY + KLPGWI
Sbjct: 752 QAAAKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIILCDRRYGTERIKGKLPGWI 808
>gi|348564904|ref|XP_003468244.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cavia porcellus]
Length = 908
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNF-----HPVVSRSFKMSLTRDCICPMVLTRGSD 498
V +++VI GT+ P+ D +LL + VV S + D I P+VL G
Sbjct: 611 VVKECRAMVIAGGTMQPVSDFREQLLAWAGTQSERVVEFSCGHVIPPDNILPLVLCSGPT 670
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ F R P + G++L + ++VP G+VCFF SY Y +++A W+ SG+L
Sbjct: 671 GQQLEFTFQQRELPAMMEETGRILCNLCNVVPGGLVCFFPSYEYQRQVLAHWDKSGLLAR 730
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K CG+ GA+ SV GK++EGI+F
Sbjct: 731 LTVRKKLFQEPKRASQVEQVLSAYSKCIKRCGQAGGPVTGALLLSVVGGKMSEGINFSDD 790
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL R Q+ G L + ++ Q +GR
Sbjct: 791 LGRCVVMVGMPYPNIRSPELQEKMAYLDQRLPRSPGQVPPGKALLENLCMKAVNQSIGRA 850
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D+RY+R +KLP WI RD + + A R+F R+ A
Sbjct: 851 IRHQRDFASIVLLDQRYTRPPVLAKLPAWI----RDRVEVKATFGAAFAALRKFHREKAG 906
Query: 725 P 725
P
Sbjct: 907 P 907
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 43/235 (18%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNS--RVLAA- 124
K+ YC+RT ++ + + E+ Q G +++ +G SR+NLCVN R L A
Sbjct: 227 TKIYYCSRTHSQLAQFVQEV------QKSPFGKDTRLVTLG--SRQNLCVNEDVRSLGAV 278
Query: 125 ---------------ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAV 169
EN++ +A KR R C F+ +
Sbjct: 279 QLINDRCMEMQRSPHENKNRAEAEKPKRRRQEGRT---------ACPFYNREQTQLLRDE 329
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+ ++ L A G++ CPY+ +R V A +VV Y LL +Q +
Sbjct: 330 ILVAARDMEQLVALGREARACPYYGSRLAVPVAQLVVLPYPMLLHAATRQAAGIRLQGQ- 388
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
VV+ DEAHN+ + + S V L A S++ Q +ER++ RL+A+
Sbjct: 389 VVIIDEAHNLIDTITDIHSTEVSGSQLCQAH---SQLLQYMERYRK----RLKAK 436
>gi|390602956|gb|EIN12348.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 868
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 159/642 (24%), Positives = 268/642 (41%), Gaps = 109/642 (16%)
Query: 104 ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFF----E 159
+ ++ L SRK LC+ L ++ D +D ACR L +E + + C + +
Sbjct: 259 VRSLSLGSRKQLCIYDE-LRSKTTD-IDEACR--------TLLSEKGD-KRCPYLPAIDD 307
Query: 160 NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAG 219
N ++ ++DL G++ CPYF +R + + +V+ Y LL
Sbjct: 308 NTRIPKLRDIILSSPMDIEDLANAGRRHETCPYFGSRSAIPQSQLVLLPYNLLLHRSARE 367
Query: 220 IISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAG 279
+ ++ K+ VVV DEAHN+ + SV V T+ +LS++ + RF++ A
Sbjct: 368 ALGIDL-KDQVVVIDEAHNLIPTLLSLSSVQVAEHTIR---LSLSQLAAYVSRFRSRLAS 423
Query: 280 R-----------LRAEYNRLVEGLALRGNLPNAWLSNPALPS-----DILKEAVPG-NIR 322
+ L+A Y + E P LS P + + L V G N+
Sbjct: 424 KHLVCLKRLVSFLKAMYGVVNEFATTGAKEPQGPLSKPEVMTVHEFVSRLGRKVDGINLL 483
Query: 323 RAEHFLH---VLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
E +L + R++ Y VEK+GP A + + S
Sbjct: 484 EVEEYLRRSKIARKISSY-----SDAVVEKQGPKRSNAGAPTPLHV-----------VES 527
Query: 380 LMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L++ L + D + + + + G ++ + + P S H
Sbjct: 528 LIVALTSPNEDGRVSLSRV---------HEAGHDTVVVRYQQLNP---------STH--- 566
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVL 493
K V D ++V++ GT+SP+ Y + P + M T I P +V+
Sbjct: 567 --FKEVVDTARTVILAGGTMSPMSDY--VTQLFPQIKSDNLMLRTYGHIVPASNIQTVVV 622
Query: 494 TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
++G KF R DP G+ L +++I P G+V FF SY+++D A+W +S
Sbjct: 623 SKGPRGNDFEFKFASRRDPLAIAELGQALSNLINITPGGMVIFFPSYAFLDSAKASWRES 682
Query: 554 GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR---------GAVFFSVARGKVAE 604
G+L + K V E Q E L +Y A D R GA+ +V K++E
Sbjct: 683 GLLAKWTTKKKVHYEPQSASEVETVLRDY--ASDISRIDPSTSKKQGAILLAVVGAKLSE 740
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF--DA-------- 654
G++F R V++ G+PF S L R++Y+ ++ + G + DA
Sbjct: 741 GLNFADDLARCVVIVGLPFANLDSPELKERMKYV-NSLETANGGKASGAKDAAHELYENM 799
Query: 655 -LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+ Q +GR IR +AD+ ++ D+RYS RSKLP W+
Sbjct: 800 CMNAVNQSIGRAIRHRADWASIVLLDRRYSSPRIRSKLPKWL 841
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
FPY YP Q M L L+ + H ++E T TGKT+ LL S++L
Sbjct: 14 FPYQPPYPNQQELMKHLYSVLEHRRHTIVESRTSTGKTLVLLCATLSWLL 63
>gi|367032502|ref|XP_003665534.1| hypothetical protein MYCTH_2309404 [Myceliophthora thermophila ATCC
42464]
gi|347012805|gb|AEO60289.1| hypothetical protein MYCTH_2309404 [Myceliophthora thermophila ATCC
42464]
Length = 624
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 160/632 (25%), Positives = 248/632 (39%), Gaps = 126/632 (19%)
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
PN E + + AA A V ++DL GK+ CPY+ +R + A VV Y
Sbjct: 2 PNSENLKQTHEFRDAALATV-----PDIEDLYRVGKELQVCPYYASRTAIPGAEVVTLPY 56
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQE 269
LL + ++ +VV+ DEAHNI + + + L A + L
Sbjct: 57 PLLLQKSARDALGITLEG-NVVIIDEAHNIMDAVANVYAAEICLSELRRARQMLGIY--- 112
Query: 270 IERFKATDAGRLR---AEYNRLVEGLA--LRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
++RF G R A+ R+VE L+ L G L P+ +LK R A
Sbjct: 113 VKRFGKKLKGENRVMVAQVGRVVESLSECLNGQLSAKGDQGIVDPNTVLKA------RGA 166
Query: 325 EHFLHVLRRLVQYLRGRLETENVEKEGPVSF-VASITAHAGIDQKTLRFCYERLHSLMLT 383
+ L +L++Y+ +E +++ V S AH DQ+ S
Sbjct: 167 DQI--NLYQLIKYI----------QESKLAYKVQSYLAHTENDQEA--------SSAGGG 206
Query: 384 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
+ + LH T+ F T + + I E E I L LS + A
Sbjct: 207 ERGSSSTPVLH--TLVSFLTALTNLSAEGRIFYEKLAENQGDIKLSYLLLS---PTHAFS 261
Query: 444 PVFDRFQSVVITSGTLSPID-----LYPRL-------LNFHPVVSRSFKMSLTRDCICPM 491
+ ++V++ GT+SP + L+P L L+ V+ S T I P
Sbjct: 262 SIASAARAVILAGGTMSPFEDYKMHLFPALPSHKITTLSCGHVIPASNLFCWTLSSIKPT 321
Query: 492 VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
S F R +P + R G +L+ + S+VPDG+V FF SY Y+D+++A W
Sbjct: 322 PSGDPSASDCFEFSFQRRQEPAMIRQLGLVLLNICSVVPDGVVVFFPSYGYLDQVVAAWQ 381
Query: 552 DS--------------GILKEIMQHKLVFIET-----QDVVE--TTLALD----NYRKAC 586
+ + K VF ET +D+++ +T L + R
Sbjct: 382 TQEAGTGATTTTTQQPTLWDRLAAKKAVFRETKGATSEDILQQYSTAVLSPRQPDRRNPA 441
Query: 587 D-----CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT 641
D GRGA+ SV GK++EGI+F GR V++ G+P+ + ARLEY+ T
Sbjct: 442 DKPPPPGGRGALLLSVVGGKLSEGINFSDRLGRCVVVVGLPYPNVHAPDWKARLEYVEST 501
Query: 642 FQIK--------------------------------------EGDFLTFDALRQAAQCVG 663
+ +F +R Q +G
Sbjct: 502 ALARLVGGGGDGGDGGDDDDGQPGGAREEAAATAARAQAKQAAREFYENTCMRAVNQSIG 561
Query: 664 RVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R IR + DY ++ D+R+S R KLPGWI
Sbjct: 562 RAIRHRGDYAAVVLVDRRFSTERIRGKLPGWI 593
>gi|242057873|ref|XP_002458082.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
gi|241930057|gb|EES03202.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
Length = 759
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 150/291 (51%), Gaps = 21/291 (7%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L C + LA++ +S+++TSGTLSP+D LN V ++ D I
Sbjct: 433 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISSDQI 492
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ G +++ + MR+ + G +V IVPDG++ FF SYS MD +
Sbjct: 493 WVGVVPVGPSGHALNSSYRMRNTIQYKQELGTAIVNFARIVPDGLLVFFPSYSMMDMCVE 552
Query: 549 TW---------NDSGILKEIMQHKLVFIETQDVVETTLALDNYR-KACDCGRGAVFFSVA 598
W +++ I + I +HK IE + A+++YR K D GA+FF+V
Sbjct: 553 FWKNRNHSNSASENTIWQRICKHKQPVIEPRQSSNFQSAIEDYRAKLHDSSSGAIFFAVC 612
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQY-TLSKILLARLEYL--------RDTFQIKEGDF 649
RGKV+EG+DF GR VI+ G+PF T +K+ L R EYL ++T + ++
Sbjct: 613 RGKVSEGLDFADRAGRAVIVTGMPFATPTDAKVRLKR-EYLDKQGTPSNKNTKTLTGEEW 671
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q VGRVIR + DYG +++ D+R++ + +S++ W+ H++
Sbjct: 672 YVQQAARAVNQAVGRVIRHRHDYGAILYCDERFAWPNYQSQMSYWLRPHIK 722
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 69/289 (23%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-- 59
++++ V V FP+D Y Q +YM + +L + LLE PTGTGKT+ LL ++
Sbjct: 3 VYRIRGVDVDFPFD-AYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWRR 61
Query: 60 ---------------------------VLSKPEN----------PVKLIYCTRTVHEMEK 82
V + E+ PV +IY +RT ++ +
Sbjct: 62 TFGEFLRVGRGGGGGGTQQLPYGSQPSVSQQSEDSTSQQQQSRYPV-IIYASRTHSQLRQ 120
Query: 83 TLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTA 139
+ ELK +Y+ + +A+ L SR+ +C+++ V R +A C+KR
Sbjct: 121 VIKELKAT-SYRPK--------MAV-LGSREQMCIHNEVSKLRGRAQNNACHFLCKKRRC 170
Query: 140 SWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMV 199
N EF +N + + + ++DL G+++G CPY+++R +
Sbjct: 171 P---------HNNHVSEFMKNKPELGNEP------FDIEDLINIGRRKGPCPYYISRELS 215
Query: 200 QFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
+ +++ Y YL+DP ++ +V++FDEAHN++++C +A S
Sbjct: 216 KSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAAS 264
>gi|300120242|emb|CBK19796.2| unnamed protein product [Blastocystis hominis]
Length = 759
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 158/666 (23%), Positives = 284/666 (42%), Gaps = 107/666 (16%)
Query: 54 SLITSYVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRK 113
S+++S P+ + YC+RT ++ + E H A + + R+
Sbjct: 149 SIVSSVFTLSPQ----IYYCSRTHSQLSQVFQEF--------LHSAWAEDVQCSCIGGRR 196
Query: 114 NLCVNSRV--LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASA--AV 169
+ C++ V L + + S + +R S + E C F N E+ S V
Sbjct: 197 SFCIHPTVKRLPTDAQMSDECLFLQRNRSRGK---------EGC-LFHNREREESIRDEV 246
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
L + ++DL + +++ CPY+ +R + + +V+ Y +L+ K + ++ K
Sbjct: 247 LTTNL-EIEDLVQYAEKEKGCPYYASRKAIPYLKLVLLPYNLILNKKSREALGIDL-KNQ 304
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
VV+FDEAHN+ N + S +V TL + + S+I+ +R+ + RL +E + +
Sbjct: 305 VVIFDEAHNLINAIGDLFSPTV---TLSMLSSSHSQIDAYYQRY----SDRLSSESHSFI 357
Query: 290 EGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF----------LHVL--RRLVQY 337
L + L+ PS+ + R +H LH + +R+VQ
Sbjct: 358 IHLQTILKALSHLLTTK--PSNFGMVNIFTVNRFIQHLHLESINLFDILHFITSKRIVQK 415
Query: 338 LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
L G ++T + + PVS ++T +L L + D
Sbjct: 416 LNGFVDTLGEDGKPPVSHFPAVT------------------DFILALTNDNED------- 450
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
A +V +Y++ P L+ + S+ K + D +SV+IT G
Sbjct: 451 ----ARVVVSYSKD---------------NGPFLRFLLLNPSVYFKEIVDECRSVIITGG 491
Query: 458 TLSPID-----LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDP 512
TL P L+P L +VS S L+ D + +T + + + F R +P
Sbjct: 492 TLQPFSEFSSQLFPHLSQ-DRIVSLSLPHILSPDHVGAFYVTHTATRQEMRFDFSNRENP 550
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
+ + L + VP G+V FF S+S + + + +G + + K +F E ++
Sbjct: 551 SLLSDLASKLGILCRTVPRGLVVFFPSFSMLQTTLRFLHSTGKFSSLNELKPIFSEEREK 610
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
+ A +Y K +GA+ F+V GK++EGI+F GR V + G+P+ +L
Sbjct: 611 -DVFAAYSSYLKD-HPSKGALLFAVIGGKLSEGINFSDDLGRCVAIVGMPYPNKTDVVLQ 668
Query: 633 ARLEYLRDTFQIKEG---DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS 689
R++YL Q K G D+ + ++ Q +GR R K D+ ++F D RY + RS
Sbjct: 669 ERMKYLD---QQKAGLGQDYYSNLCIKAVNQAIGRAFRHKEDWASVVFLDYRYCQQSIRS 725
Query: 690 KLPGWI 695
+L WI
Sbjct: 726 RLTRWI 731
>gi|403159247|ref|XP_003319882.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168014|gb|EFP75463.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 826
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 139/639 (21%), Positives = 272/639 (42%), Gaps = 93/639 (14%)
Query: 43 PTGTGKTIALLSLITSYVLSKPE--------NPVKLIYCTRTVHEMEKTLAELKLLHNYQ 94
P G +++ ++ Y KP+ + VK+ + +RT ++ + ++E+
Sbjct: 175 PNGLPRSVQ--EMLDKYTGPKPQHREVELEPDCVKIYFTSRTHSQLNQFISEI------- 225
Query: 95 TRHLGPAAKILAIGLSSRKNLCVNSRVL-AAENRDSVDAACRKRTASWVRALAAENPNIE 153
R K+ I L SR NLC+N V A+ ++++ AC S R P+++
Sbjct: 226 -RKTTFQDKVRVITLGSRANLCINRSVRDKAQTLEAINEACMDLQKSDKRC--PHLPSLD 282
Query: 154 TCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLL 213
+ ++ A A + + +++L G+ Q CPY+ +R V+ A +V Y LL
Sbjct: 283 EQDRMNDFRDHALAQI-----HDIEELAELGRVQNCCPYYGSRKAVRRAQIVTLPYNLLL 337
Query: 214 DPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL-SRINQEIER 272
+ ++K +VV+ DEAHN+ + + +VS+ + + + +N+ +
Sbjct: 338 QNSSREALGISLEK-NVVIVDEAHNLIDSILGIRAVSLSNTLISQIHKAFDTYVNKFSPK 396
Query: 273 FKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPG------------- 319
K T+ L+ L+ N W N P+ + E
Sbjct: 397 LKGTNLAHLK----HLLRVFKCLLNFSKNWSKN-VPPNKVRHEETVTTNTLLENSGVLDQ 451
Query: 320 -NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLH 378
N+ E +LH + + + + +VEK+ + A ++ + TL + ++
Sbjct: 452 LNVLELEKYLHESKIINKVAGYATKGADVEKKNQSAQQAD--SNFSRSRSTLVTAFYKMQ 509
Query: 379 SLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDA 438
+ +L + D D + + + A+ T T + ++ DA
Sbjct: 510 AFILAMSNADKDGRILMVSERSTASDQPTITIKYQLL---------------------DA 548
Query: 439 SLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH----PVVSRSFKMSLTRDCICP--MV 492
S + + +SVV+ GT++P+D +FH P VS + + I P +
Sbjct: 549 SSSFSDIVSEARSVVLAGGTMAPLD------DFHSQLFPFVSPEKILDFSCSHIVPPEHL 602
Query: 493 LTRGSDQLPVST----KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
L R + P+ T KF + DP + + G+ + + +I+ DG++CFF SY+ +D +
Sbjct: 603 LVRAVSKGPMGTNLQLKFSSKDDPKMQNDLGQSVANICNIIKDGVICFFPSYASLDTLTD 662
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD-------CGRGAVFFSVARGK 601
W +G+ + K +FIE + + L+ Y A + G + +V GK
Sbjct: 663 RWKKTGLWTRLENKKKIFIEPKSAADVDKILNGYSAAVNQSTNPTSVSGGGLMLAVVGGK 722
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD 640
++EGI+F + R VI+ G+P+ + S L R++Y+ +
Sbjct: 723 LSEGINFSNNLCRAVIVIGIPYPNSQSVELKERIKYVEN 761
>gi|413944885|gb|AFW77534.1| hypothetical protein ZEAMMB73_555309, partial [Zea mays]
Length = 590
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 153/619 (24%), Positives = 256/619 (41%), Gaps = 97/619 (15%)
Query: 163 KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIIS 222
K S+ V G ++DL GK+ G CPY+ +R MV+ A++VV YQ LL +
Sbjct: 9 KEFSSEVSNQGALDIEDLAQIGKKIGTCPYYGSRDMVRSADLVVLPYQSLLLKSARESLG 68
Query: 223 KEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
+ K SVV+ DEAHN+ + + + L+ LS +++ ++RF L
Sbjct: 69 LNL-KNSVVIIDEAHNLADSLSNMYNSKITSSQLKAV---LSCLDEYLDRFYNV----LG 120
Query: 283 AEYNRLVEGLA-LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
A R ++ L L + ++N S + + FL
Sbjct: 121 AGNRRYIQTLTVLTKSFIRVLINNQDGASTMSSMTI-------NQFLF-----------S 162
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHI---QTI 398
L+ +N+ FV + I K + +L S+ ++ DE I Q +
Sbjct: 163 LDIDNINIVKLCQFVK----ESNIIHKVCGYA-NKLSSIQNQFDLQLHDEGSSIACFQAL 217
Query: 399 CDFA-TLVGTYTRGFSIIIEPFDERMPHIPDPV-LQLSCHDASLAVKPVFDRFQSVVITS 456
DF +L+ + G I+ + +++ PD L+ A V +V++
Sbjct: 218 VDFLRSLLNSNDDGRIIVAK---QKLGGQPDEAYLKFVMLCAEKIFSEVTQDAYAVILAG 274
Query: 457 GTLSPID-----LYPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMR 509
GTL PI+ L P L P + F + + + I P+ +TRG ++ R
Sbjct: 275 GTLQPIEETRLRLCPSL---PPTDIKFFTCNHIVPPESILPIAVTRGPSGKAFDFSYNSR 331
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
S P + G+ + ++++VP+G+V FF SY Y + W +G + I + K VF E
Sbjct: 332 SSPSMIEELGRFICNIITVVPEGVVMFFSSYDYERRVYDAWMTTGTISRISKKKHVFREP 391
Query: 570 QDVVETTLALDNYRKAC--------DCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
++ + L+ Y++A D G GA+ +V GK++EGI+F GR VIM G
Sbjct: 392 RNSADVEAVLNKYKEAIESCSNFSQDTGVNGALLLAVVGGKISEGINFSNGMGRCVIMVG 451
Query: 621 VPFQYTLSKIL---LARLEYLRDTFQIKEGDFLT------------FDALRQAA------ 659
+P+ L + +E + +F + + L+ +D LR+
Sbjct: 452 LPYPSPSDVELIETIKHIESISSSFSVGDDKALSRKYDDECELQPGYDILRKCTRGGREY 511
Query: 660 ----------QCVGRVIRSKADYGMMIFADKRYSRHDKRS-------KLPGWILSHLRDA 702
Q +GR IR DY M+ D RY++ KLP WI + L A
Sbjct: 512 YENLCMKAVNQSIGRAIRHINDYAAMLLVDSRYAQTSSTKSFSCPADKLPQWIKARLSCA 571
Query: 703 HLNLSTDMALHIAREFLRK 721
+LH +F +K
Sbjct: 572 QNYGEVHRSLHQFFKFNKK 590
>gi|432960238|ref|XP_004086424.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oryzias latipes]
Length = 1167
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 12/272 (4%)
Query: 452 VVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
+++TSGTLSP+ + + VS + RD I V+ RG D +P+S+ FD R
Sbjct: 475 IILTSGTLSPLSSFTSEMRIEFPVSLENSHVIERDQIFVSVVDRGPDGVPLSSAFDRRFV 534
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD 571
P + G + +VP G++ FF S+ M++ + W +G I K +F+E +
Sbjct: 535 PENMSSLGNTVANFSRVVPHGLLVFFPSFPLMEKTLDFWKANGHADRIENVKPMFVEPKG 594
Query: 572 VVETTLALDN-YRKACD-CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ +D Y K D +G FF+V RGK +EG+DF + R VI+ G+PF +
Sbjct: 595 SGSFSEIIDGYYNKVSDPASKGGSFFAVCRGKASEGLDFADTFSRGVIITGLPFPPRMDP 654
Query: 630 ILLARLEYLRDTFQIKE--------GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
++ ++++L + + K ++ A R Q +GRVIR K DYG + D+R
Sbjct: 655 RVILKMQFLEEMSKNKAPGVRYLLGQEWYRQQAFRAVNQAIGRVIRHKEDYGAIFLCDQR 714
Query: 682 YSRHDKRSKLPGWILSHLR--DAHLNLSTDMA 711
+ D R+ LP W+ H+R D N+ D++
Sbjct: 715 FKSSDARALLPSWVKPHVRVYDGFGNVVRDVS 746
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 65/319 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L VTV FP+ Y Q YM ++ + L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LHGVTVDFPFPP-YDCQKDYMAKVLQCLQQKVNGVLESPTGTGKTLCLLCATLAWREHFR 64
Query: 60 -VLS--------KPENPV-------------------------KLIYCTRTVHEMEKTLA 85
+S K EN K+IY +RT ++ + +
Sbjct: 65 DTISACKIAERLKGENMFPNTTLASWGTAATDGDKQAYYLDVPKIIYASRTHSQLAQVIG 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC+N V+ E+ CR + ++
Sbjct: 125 EL--------RNTSYRPKVCVLG--SREQLCINPEVMRQESNHVKVHMCRGKVST----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C ++ N ++ ++ L + ++DL FG +Q CPY+L+R + Q A+++
Sbjct: 170 -------RSCLYYNNVDERSTDKDLVNSILDVEDLVKFGNKQKVCPYYLSRSLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLDPK + E+ +VV+FDEAHN++ +C E+ S + + A + R
Sbjct: 223 FMPYNYLLDPKSRRAHNIELSG-AVVIFDEAHNLEKMCEESSSFDLTPYDVAAAITAVDR 281
Query: 266 INQEIERFKATDAGRLRAE 284
+ +E+ K T G AE
Sbjct: 282 L--LVEQAKETGGGEFTAE 298
>gi|407929782|gb|EKG22592.1| Helicase-like DEXD box c2 type [Macrophomina phaseolina MS6]
Length = 816
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 172/720 (23%), Positives = 284/720 (39%), Gaps = 147/720 (20%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLH---------NYQTR-------HLGPAAKILAIGLSS 111
+K+ YC+RT ++ + EL+ + Q R H + L S
Sbjct: 137 LKVFYCSRTHSQLSQFAGELRRVKMPPAISSSDGQQMRSGQQDDAHTEITENFKHLTLGS 196
Query: 112 RKNLCVNSRVLAAENRDSVDAACR--KRTASWVRALAAENPNIETCEFFENYEKAASAAV 169
RKNLC+N +V + V+ C ++ + P ET ++ A A
Sbjct: 197 RKNLCINPKVQKLGSAPLVNEKCLDLQKPGTAADRKCPYLPTKETEPIVNDFRDHALA-- 254
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
+ ++DL GK+ G CPY+ +R V+ + +V Y LL + M K
Sbjct: 255 ---DIRDIEDLGKIGKKLGVCPYYASRAAVKPSEIVTLPYPLLLQKTAREALDINM-KGH 310
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYN 286
VV+ DEAHN+ + SVSV +L R+ ++ ++RF+ G+ R A+
Sbjct: 311 VVIIDEAHNLMDAITGIYSVSV---SLSQLLRSRGQLTTYLQRFRNRLKGKNRVYLAQTV 367
Query: 287 RLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
RLV+ L ++YL+ +++
Sbjct: 368 RLVDSL------------------------------------------IRYLQS-IDSNT 384
Query: 347 VEKEGPVSFVASITAHAGIDQ----KTLRFCYERLHSLMLTLEITDTDE----------- 391
E+EG V + + A G+DQ K LR+ E + + + T+E
Sbjct: 385 GEEEGIVQ-IGDLMAGKGVDQINLYKLLRYLDESRLARKVDGYVLHTEEQEKIKQSTSAM 443
Query: 392 ----------FLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLA 441
+HIQ+ F L+ G DE + L+ D +
Sbjct: 444 SGEPRSTMPVLMHIQSF--FYALLNPSVEG-RFFYAKNDEEL----GLCLKYMLLDPTHH 496
Query: 442 VKPVFDRFQSVVITSGTLSPIDLYPR-LLNFHP---VVSRSFKMSLTRDCICPMVLTRGS 497
+ + + ++V++ GT+SP+ Y LL++ P +V+ S + + +T G
Sbjct: 497 FRDIVEDARAVILAGGTMSPMSDYSEHLLSYLPPSRIVTVSCGHVIPPSNLLAWPVTTGP 556
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND----- 552
P F+ R+ + G L+ +S +PDG+V FF SY+Y+D + W
Sbjct: 557 SGAPFDFTFEKRNTEATILDLGSALLSFISSIPDGVVVFFPSYAYLDRCMEAWQRLPSPR 616
Query: 553 -SG---ILKEIMQHKLVFIETQDV----------------VETTLALDNYRKACDCG--R 590
SG + + K +F E+++ V T L Y A G R
Sbjct: 617 ASGAKTLYDALRLVKPIFHESKNKATRMEKTKTAPPEQINVTTDSVLSAYSTAVATGNGR 676
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR----------D 640
GA+ +V G ++EGI+F GR V++ G+PF S A+L Y+ D
Sbjct: 677 GALLLAVIGGSLSEGINFSDGLGRGVVVVGLPFPNPHSAEWKAKLAYISRKAVEKGGSGD 736
Query: 641 TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+ +F +R QCVGR IR + DY ++ D+RY + K PGWI LR
Sbjct: 737 AGKAAAREFYENACMRAVNQCVGRAIRHRNDYASILLVDRRYESDRIKVKFPGWIRGSLR 796
>gi|297261772|ref|XP_001114510.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like isoform 4 [Macaca mulatta]
Length = 910
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 613 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS 672
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + S+VP G+VCFF SY Y+ ++ A W G+L
Sbjct: 673 NQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGR 732
Query: 559 IMQHKLVFIETQ---DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + V + LA +AC R GA+ SV GK++EGI+F +
Sbjct: 733 LAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRVTGALLLSVVGGKMSEGINFSDN 792
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+PF S L ++ YL T Q G L + ++ Q +GR
Sbjct: 793 LGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENLCMKAVNQSIGRA 852
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 853 IRHQKDFASIVLLDQRYARPPVLAKLPAWI 882
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 231 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 282
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 283 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 342
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 343 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQ-VVIIDEAHN 401
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
+ + SV V L A S++ Q +ER+
Sbjct: 402 LIDTITGMHSVEVSGSQLCQAH---SQLLQYMERY 433
>gi|359491914|ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
Length = 1255
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 162/718 (22%), Positives = 277/718 (38%), Gaps = 151/718 (21%)
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
+ Y +RT ++ + + E + +T + P A L+SRK+ C N ++ A N
Sbjct: 141 IFYASRTHTQISQVIREYR-----KTAYRVPMAV-----LASRKHYCTNRKINAKAN--- 187
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG----VYTLQDLRAFGK 185
+D C+ L + + C F+N K L G + ++DL G+
Sbjct: 188 IDEECK---------LLVRDQDF-GCPEFKNMHKVKGHPSLQKGGCHEAHDIEDLVKVGQ 237
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIE 245
C Y+ AR M A +V Y Y+++P + G + +++ ++++ DEAHNI+++ +
Sbjct: 238 VVKGCAYYAARDMADNAQLVFCPYSYIINPVIRGAMELDIEG-AILILDEAHNIEDMARD 296
Query: 246 ALSVSVRRQTLEGATRNLSR------------------INQEIERFKATDAGRLRAEYNR 287
A SV V L L + I I+R K T R Y
Sbjct: 297 AGSVDVEEDVLHKLQTELGQLCPADAMIYQPLYEMTQDIISWIDRKKNTLEKREFQHYFS 356
Query: 288 LVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
G L A +S + P IL+E I+ A
Sbjct: 357 CWTGDKALRELQEANISQQSFP--ILQECARKAIKAA----------------------- 391
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC--DFATLV 405
+ + + +G+ TL Y L + D L +Q D ++
Sbjct: 392 -----IDIESRVAHLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSVA 446
Query: 406 GTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
G++T FS L C + ++ + + D SV++TSGTLSP+ +
Sbjct: 447 GSWTCTFS-------------------LWCLNPAVVFRGIADLSLSVILTSGTLSPMHSF 487
Query: 466 PRLLN--FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLV 523
L F + + + + + + P++ + GK L
Sbjct: 488 SSELGVQFGTCLEAPHVIDIESQ-LWAAIFSTSPGNYPLNASYKTADAYAFQDALGKSLE 546
Query: 524 EMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE----TQDVVETTL-- 577
E+ IVP G + FF SY M+++ + W ++G ++ + K +FIE +QD E L
Sbjct: 547 EIFKIVPGGTLVFFPSYKLMEKLCSRWRETGQWSQLNEQKFLFIEPRGGSQDDFEPILKA 606
Query: 578 -------------------------------ALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ DN +K +GA F +V RGKV+EGI
Sbjct: 607 YYESVRRGTKPTLGRKRRTKKMDLSQSDEKESQDNSKK-----KGAAFLAVFRGKVSEGI 661
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-----IKEGDFLTFDALRQAAQC 661
DF R VI+ G+PF + I +A+ + D ++ + ++ A R Q
Sbjct: 662 DFSDENARAVIIVGIPFP-NVHDIQVAQKKKYNDMYKSSKDLLSGNEWYCHQAFRALNQA 720
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 719
GR IR + DYG +I D+R+ + + W+ ++ S DM+L + F
Sbjct: 721 AGRCIRHRFDYGGIILLDERFREDRNTAYISKWLRKSIKQYE---SFDMSLERLKSFF 775
>gi|66807703|ref|XP_637574.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60465999|gb|EAL64066.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1078
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 149/277 (53%), Gaps = 27/277 (9%)
Query: 450 QSVVITSGTLSPIDLYPRLL-----------NFHPVVSRSFKMSLTRDCI-CPMVLTRGS 497
+SVV+TSGTLSP+ +P L N + R++ +L+ ++ T G
Sbjct: 802 RSVVLTSGTLSPLYSFPMELAAKFPISAEMGNLPDIAQRAWIGTLSHGVKGTKLICTHGP 861
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
S D + + G+ +++ + ++P G++CFF SY +++++++ W+++GILK
Sbjct: 862 -----SEGLDFQD------SLGETILQHIELIPSGVLCFFPSYGFLEKLLSRWDETGILK 910
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRHYGRL 615
+I K F E ++ E LDNYR+ +GA+ F+V RGKV+EGIDF Y R
Sbjct: 911 KINAKKRYFYEPKNQREFIETLDNYREEIKQRPNKGAILFAVCRGKVSEGIDFSDEYARG 970
Query: 616 VIMFGVPFQYTLS-KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGM 674
VI+ G+P+ + +I+L + + I GD+ A R Q +GR IR K DYG
Sbjct: 971 VIVVGIPYPSLVDLRIVLKKEHNDTNKKGISGGDWYKLQAYRALNQALGRCIRHKNDYGS 1030
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
++ D+R+++ + L W S +++ + NL+T ++
Sbjct: 1031 ILLIDERFTQMGNWNSLSKWTRSCIKN-NRNLNTSLS 1066
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 33/192 (17%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV- 121
K ++P + +C+RT ++++ ELK P + + L+SR C+N +
Sbjct: 423 KKKSPT-IFFCSRTHSQIKQLTGELKKT---------PYRPNMVV-LASRDQYCINPLLK 471
Query: 122 -----LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
L + +D CR + +LA ++ +F +K V+
Sbjct: 472 DVPKKLEKCKKLLLDHGCRFKKTEQQTSLA------KSSDFLGGGKKE---------VWD 516
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++DL G+ CPYF +R M++ A+++ Y YL+DP++ + ++ S+V+FDEA
Sbjct: 517 IEDLMEAGQAHSECPYFASRDMIEKADLIFCPYNYLIDPQIRKSFADKVAG-SIVIFDEA 575
Query: 237 HNIDNVCIEALS 248
HNI++ +E S
Sbjct: 576 HNIEDALMETSS 587
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
++K+ + V FP+ Y Q S M + LD+K +C+LE PTGTGKT++LL
Sbjct: 190 VYKIGNYKVKFPF-KPYACQASMMSRILEGLDSKENCILESPTGTGKTLSLL 240
>gi|383410919|gb|AFH28673.1| putative ATP-dependent RNA helicase DDX11 isoform 1 [Macaca
mulatta]
Length = 906
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 609 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS 668
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + S+VP G+VCFF SY Y+ ++ A W G+L
Sbjct: 669 NQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGR 728
Query: 559 IMQHKLVFIETQ---DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + V + LA +AC R GA+ SV GK++EGI+F +
Sbjct: 729 LAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRVTGALLLSVVGGKMSEGINFSDN 788
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+PF S L ++ YL T Q G L + ++ Q +GR
Sbjct: 789 LGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENLCMKAVNQSIGRA 848
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 849 IRHQKDFASIVLLDQRYARPPVLAKLPAWI 878
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQ-VVIIDEAHN 397
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
+ + SV V L A S++ Q +ER+
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAH---SQLLQYMERY 429
>gi|355785871|gb|EHH66054.1| hypothetical protein EGM_02957 [Macaca fascicularis]
Length = 906
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 609 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS 668
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + S+VP G+VCFF SY Y+ ++ A W G+L
Sbjct: 669 NQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGR 728
Query: 559 IMQHKLVFIETQ---DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + V + LA +AC R GA+ SV GK++EGI+F +
Sbjct: 729 LAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRVTGALLLSVVGGKMSEGINFSDN 788
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+PF S L ++ YL T Q G L + ++ Q +GR
Sbjct: 789 LGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENLCMKAVNQSIGRA 848
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 849 IRHQKDFASIVLLDQRYARPPVLAKLPAWI 878
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQ-VVIIDEAHN 397
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
+ + SV V L A S++ Q +ER+
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAH---SQLLQYMERY 429
>gi|355563978|gb|EHH20478.1| hypothetical protein EGK_03343 [Macaca mulatta]
Length = 906
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 609 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS 668
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + S+VP G+VCFF SY Y+ ++ A W G+L
Sbjct: 669 NQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGR 728
Query: 559 IMQHKLVFIETQ---DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + V + LA +AC R GA+ SV GK++EGI+F +
Sbjct: 729 LAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRVTGALLLSVVGGKMSEGINFSDN 788
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+PF S L ++ YL T Q G L + ++ Q +GR
Sbjct: 789 LGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENLCMKAVNQSIGRA 848
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 849 IRHQKDFASIVLLDQRYARPPVLAKLPAWI 878
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQ-VVIIDEAHN 397
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
+ + SV V L A S++ Q +ER+
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAH---SQLLQYMERY 429
>gi|402885129|ref|XP_003906018.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Papio anubis]
Length = 845
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 548 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS 607
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + S+VP G+VCFF SY Y+ ++ A W G+L
Sbjct: 608 NQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGR 667
Query: 559 IMQHKLVFIETQ---DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + V + LA +AC R GA+ SV GK++EGI+F +
Sbjct: 668 LAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRVTGALLLSVVGGKMSEGINFSDN 727
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+PF S L ++ YL T Q G L + ++ Q +GR
Sbjct: 728 LGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKNLVENLCMKAVNQSIGRA 787
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 788 IRHQKDFASIVLLDQRYARPPVLAKLPAWI 817
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 201 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 252
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 253 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 312
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQ 210
L A GK+ CPY+ +R + A +VV YQ
Sbjct: 313 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQ 344
>gi|389744669|gb|EIM85851.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 875
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 152/617 (24%), Positives = 251/617 (40%), Gaps = 75/617 (12%)
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
A+ L SRK LC+N L A+ D +D CR S P E +
Sbjct: 283 AVSLGSRKQLCINED-LRAKGGD-LDERCRDLMNSKKGHGCPYLPRDEDDMRLHDLRDQI 340
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
AA P + ++L + K+ CPYF +R V A +V Y LL P + +
Sbjct: 341 LAA--PKDI---EELVSVAKESRTCPYFASREAVSQAELVTMPYNLLLQPSARDALGINL 395
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY 285
Q + V+V DEAHN+ + + +VS+ Q L+ + + +I+ + +F+ + R
Sbjct: 396 QDQ-VIVIDEAHNLISTILSLSTVSMTYQNLKDS---MDQISTYLSKFRLRLSSRHMLHL 451
Query: 286 NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETE 345
RL L W S L ++ + AV + V+R L Q + E
Sbjct: 452 TRLHTFLKAFMAFIIKWRSQQKLGNE--QHAVVMTVG------EVMRALGQNIDAVNLLE 503
Query: 346 NVEKEGPVSFVASITAHAGIDQKTLR------FCYERLH---SLMLTLEITDTDEFLHIQ 396
E ++A++ Q + R F LH S + ++ D L +
Sbjct: 504 IYEYLRSSKIARKVSAYSTQFQPSQRKDSESDFLKPSLHVIESFITSITQAADDGRLLLS 563
Query: 397 TICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITS 456
+ D + TY C + S + + D QS+++
Sbjct: 564 SCADVESFSITY-------------------------QCLNPSPQFQALVDSAQSIILAG 598
Query: 457 GTLSPI-DLYPRLLNFHPVVSRSFKMS----LTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
GTLSP D+ +L + P SR + S + + + +++ G + S
Sbjct: 599 GTLSPTEDIITQLFYYLPS-SRISQFSCLHIIPKSNLQALIVGYGPRNSDLKFTHSNLST 657
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD 571
G+ G+ ++ ++ VP G+V FF SY + ++TW + + + +F+E D
Sbjct: 658 KGLIDELGQAILNLIRSVPGGVVIFFSSYKVLHMALSTWKKGHLFSALESKRELFVEPSD 717
Query: 572 VVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKIL 631
E LD Y A RGA+ F+V K++EG++F + R+V++ G+PF S L
Sbjct: 718 GSEVESVLDAYSLATQKPRGALLFAVIGAKLSEGLNFSDNLARMVVIVGLPFANLNSLEL 777
Query: 632 LARLEY---LRDTFQIKEGDF----------LTFDALRQAAQCVGRVIRSKADYGMMIFA 678
RL Y ++ T F L +A+ Q+ +GR IR K D+ +I
Sbjct: 778 KERLRYADHIQGTLPSSNSPFGLAGTYLYENLCMNAVNQS---IGRAIRHKDDWASLILL 834
Query: 679 DKRYSRHDKRSKLPGWI 695
D RY +KLP WI
Sbjct: 835 DSRYQNSRIYNKLPTWI 851
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 7 DVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
D FPY Y Q M L A++ + ++E PTGTGKT++LLS +++
Sbjct: 20 DTFPIFPYPEPYNIQLDLMRHLYAAIEGRKVAIVESPTGTGKTLSLLSATFTWL 73
>gi|170034957|ref|XP_001845338.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|229891619|sp|B0W9F4.1|RTEL1_CULQU RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|167876796|gb|EDS40179.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 978
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 147/283 (51%), Gaps = 10/283 (3%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
V+ C + ++ + R +S+++TSGTL+P+ L+ V + +
Sbjct: 463 VINFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVKLENPHIIDGSQV 522
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
C ++ +G D+ +++ + R +P + G+ ++ I+P G++ FF SY +++
Sbjct: 523 CVKIVGQGPDKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPLLNKCQE 582
Query: 549 TWNDSGILKEIMQHKLVFIET--QDVVETTLALDNYRKACDC-GRGAVFFSVARGKVAEG 605
W ++GI +I + K +F+E +D T+ + Y K D G+GAVF +V RGKV+EG
Sbjct: 583 AWQETGIWAQISRTKPIFVEPRGKDQFLNTMT-EYYAKINDPDGKGAVFMAVCRGKVSEG 641
Query: 606 IDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT----FQIKEGD-FLTFDALRQAAQ 660
+DF GR I+ G+PF ++ + YL++ +I GD + + +A R Q
Sbjct: 642 LDFADMNGRACIITGLPFPPLKDARVILKKRYLQEVRTRENEIISGDEWYSLEAARAVNQ 701
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
+GRVIR K DYG ++ D R+ ++++L WI HL A
Sbjct: 702 AIGRVIRHKNDYGAILLCDNRFHNPRQKAQLSSWIQKHLNTAQ 744
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 123/303 (40%), Gaps = 76/303 (25%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+ + + V FP++ Y Q YM + L + +LE PTGTGKT++LL +++L
Sbjct: 4 YLINGIPVNFPFEP-YQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWILH 62
Query: 63 KP-------------------------------------------ENPVK---------L 70
K EN K +
Sbjct: 63 KKAQVQASQRTNVSELKEFEFEKKKMGGGGGGPKPEMDKLLDELNENSGKEGGRWGVPKI 122
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
IY +RT ++ + + E+K R A+ L SR LC++ V E
Sbjct: 123 IYASRTHSQLTQAMQEMKNTSYGFMR---------AVILGSRDQLCIHPEVAKEEGNAVK 173
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENYEKAAS-AAVLPPGVYTLQDLRAFGKQQGW 189
C+ + ++A A C F+ E + + ++DL +
Sbjct: 174 TNLCKAK----IQARA--------CSFYSRVEACKERPEITGSTIMDIEDLVRVSTKLKA 221
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CP+F+++ +++ A+V+ Y YLLDPK + E+ ++++ DEAHN+D +C E+ S+
Sbjct: 222 CPFFMSKELIENADVLFMPYNYLLDPKARKANNLEL-ANTIIILDEAHNVDKMCEESASM 280
Query: 250 SVR 252
+R
Sbjct: 281 QIR 283
>gi|60811280|gb|AAX36168.1| DEAD/H box polypeptide 11 [synthetic construct]
Length = 971
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 156/618 (25%), Positives = 253/618 (40%), Gaps = 58/618 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQTICDFA 402
+ G V AG Q +L + + +HIQ F
Sbjct: 514 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQ---GFL 570
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 571 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 687 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 746
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 630 ILLARLEYLRDTFQIKEG 647
L ++ YL T + G
Sbjct: 807 ELQEKMAYLDQTLSPRPG 824
>gi|410348526|gb|JAA40867.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 972
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 159/623 (25%), Positives = 254/623 (40%), Gaps = 68/623 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + Q +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYMEQYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------FLHIQT 397
+ G V AG Q + L M DE +HI+
Sbjct: 514 RYGAVFSSREQPKLAGFQQ-----FLQSLQPRMTEALAAPADESQASTPRPASPLMHIE- 567
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 568 --GFLAALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGG 621
Query: 458 TLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL VV S + D I P+V+ G P+ F R
Sbjct: 622 TMQPVSDFRQQLLACAGVEAEHVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKREL 681
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ- 570
P + G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E +
Sbjct: 682 PQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKS 741
Query: 571 --DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
V + LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 742 AHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 801
Query: 625 YTLSKILLARLEYLRDTFQIKEG 647
S L ++ YL T + G
Sbjct: 802 NIRSAELQEKMTYLDQTLSPRPG 824
>gi|396081915|gb|AFN83529.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 617
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 160/698 (22%), Positives = 298/698 (42%), Gaps = 129/698 (18%)
Query: 17 IYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-------------VLSK 63
+Y Q ++ + K+ +D + + PTGTGKT++LLS + Y VL +
Sbjct: 6 LYEGQKQFIKDAKKIVDGEAVGIFSSPTGTGKTMSLLSAVVDYIDVDGVELNHRNRVLEQ 65
Query: 64 P---ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
N + YCTRT ++ + + ELK L + A+ L SRK C+N +
Sbjct: 66 ALFQRNGGTVFYCTRTHTQLAQAINELKRLD----------VRCNAVVLGSRKIYCLNEK 115
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+L +N D+++ C++ + C F++ E VL ++DL
Sbjct: 116 ILQYKNSDAMNEGCKQIVKEGL------------CAFYDGGELFDGCGVLD-----VEDL 158
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
GK+Q CPY+ ++ ++V YQ L + + ++ + S+V+ DEAHNI
Sbjct: 159 TLIGKEQRLCPYYASKIYSHQCDIVFLPYQLLFTREGRRSVDIDV-RGSIVIVDEAHNIC 217
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
+ I+ + ++ T +S+ + +E +K + R+R + G L
Sbjct: 218 DSVIQMNTSTILFMT-------ISKYIKAMEMYKERYSERVRRD-----------GVL-- 257
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
E L VLRR+ + G + N+ +E V V+
Sbjct: 258 ------------------------ERILEVLRRIEAF--GLMHCRNMNEEEGVMGVSEFL 291
Query: 361 AHAGIDQKTLRFCYERLHSLMLT--LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
I+ + + + S ++ LE + D L + I F +L+ +G I
Sbjct: 292 LKTSIEDFNMLEIEDYIASSGISRKLEGFEKDLNLQLSEISKFLSLLTMSDKGGRIFYTS 351
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
+R+ P DA++ + V + +S++ GT+ PID +L S
Sbjct: 352 --KRIKFTP--------LDATMYFEDVLE-CKSLLFAGGTMEPIDQLASVLGKRSPQYFS 400
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD-GIVCFF 537
++ S+ RD + P+V+ G V ++ R ++ ++ + V D G+VCF
Sbjct: 401 YR-SVCRDFL-PIVVGSGPSGREVVVNYETRESTESVKDVASSILNFSNAVRDGGMVCFL 458
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSV 597
S +Y+ + D I + K ++ + + E L + ++AC + F+V
Sbjct: 459 PSKAYLKILREVCGDM-----IGRKKALYEDLTNFQEYVLEVK--KEAC------ILFAV 505
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
G+++EG++F+ RL+++ GVP+ LE L++ + + T A+R
Sbjct: 506 MGGRLSEGMNFNDKLCRLLMVVGVPYPSQ-------DLE-LKERIKHNGRGYTTSIAMRI 557
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q +GR +R K DY +++ D+RY++ K + WI
Sbjct: 558 VNQTLGRALRHKDDYAVLVLLDRRYAQLSKL--ISSWI 593
>gi|195162511|ref|XP_002022098.1| GL14463 [Drosophila persimilis]
gi|229891625|sp|B4GU19.1|RTEL1_DROPE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194103996|gb|EDW26039.1| GL14463 [Drosophila persimilis]
Length = 1009
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 12/279 (4%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
++ C + ++ + + + +SV++TSGTL+P L P + V++ + + +
Sbjct: 454 IVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQS 511
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + F R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 512 QVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKC 571
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GAVF +V RGKV+EG+
Sbjct: 572 VDAWQASGLWADISCKKPIFVEPRGKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQ 660
DF GR VI+ G+PF ++ + YL +T + KE L+ DA R Q
Sbjct: 632 DFADRNGRAVIITGLPFPPLKDPKVILKRRYL-ETNRTKENQLLSGQEWYNLDATRAVNQ 690
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GRVIR + DYG ++ D R+ + +L WI HL
Sbjct: 691 AIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHL 729
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 63/312 (20%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENP 67
+ V+FP++ Y Q YM ++ L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEH 67
Query: 68 V---------------------------------------KLIYCTRTVHEMEKTLAELK 88
K+IY +RT ++ + + ELK
Sbjct: 68 QQQMIKLKATSKEGGPGSGPGGDLSELAMTVGQANNWGVPKVIYASRTHSQLNQAMRELK 127
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
+T + A + ++ L SR LC++ V+ + + C+ R S
Sbjct: 128 -----RTAY----ANMRSVVLGSRDQLCIHPEVMKEQGNSNKVNLCKLRVHS-------- 170
Query: 149 NPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+TC F E K P + ++DL G++ CPY+ ++ +V A++
Sbjct: 171 ----KTCTFQLRVESKKDHPDFRGPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFM 226
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YLLDPK E+ ++++ DEAHNI+ +C E+ SV +R + A +++ I
Sbjct: 227 PYNYLLDPKARKANKIEL-GNTIIILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHIM 285
Query: 268 QEIERFKATDAG 279
+ ++ +AG
Sbjct: 286 KVFTSGESQEAG 297
>gi|198467617|ref|XP_001354453.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
gi|229891755|sp|Q29FS3.2|RTEL1_DROPS RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|198149329|gb|EAL31506.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
Length = 1009
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 12/279 (4%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
++ C + ++ + + + +SV++TSGTL+P L P + V++ + + +
Sbjct: 454 IVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQS 511
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + F R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 512 QVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKC 571
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GAVF +V RGKV+EG+
Sbjct: 572 VDAWQASGLWADISCKKPIFVEPRGKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQ 660
DF GR VI+ G+PF ++ + YL +T + KE L+ DA R Q
Sbjct: 632 DFADRNGRAVIITGLPFPPLKDPKVILKRRYL-ETNRTKENQLLSGQEWYNLDATRAVNQ 690
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GRVIR + DYG ++ D R+ + +L WI HL
Sbjct: 691 AIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHL 729
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 63/312 (20%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENP 67
+ V+FP++ Y Q YM ++ L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEH 67
Query: 68 V---------------------------------------KLIYCTRTVHEMEKTLAELK 88
K+IY +RT ++ + + ELK
Sbjct: 68 QQQMIKLKATSKEGGPGSGPGGDLSELAMTVGQANNWGVPKVIYASRTHSQLNQAMRELK 127
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
+T + A + ++ L SR LC++ V+ + + C+ R S
Sbjct: 128 -----RTAY----ANMRSVVLGSRDQLCIHPEVMKEQGNSNKVNLCKLRVHS-------- 170
Query: 149 NPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+TC F E K P + ++DL G++ CPY+ ++ +V A++
Sbjct: 171 ----KTCTFQLRVESKKDHPDFRGPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFM 226
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YLLDPK E+ ++++ DEAHNI+ +C E+ SV +R + A +++ I
Sbjct: 227 PYNYLLDPKARKANKIEL-GNTIIILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHIM 285
Query: 268 QEIERFKATDAG 279
+ ++ +AG
Sbjct: 286 KVFTSGESQEAG 297
>gi|132566527|ref|NP_689651.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|380420356|ref|NP_001244073.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|74731686|sp|Q96FC9.1|DDX11_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=CHL1-related protein 1; Short=hCHLR1; AltName:
Full=DEAD/H box protein 11; AltName: Full=Keratinocyte
growth factor-regulated gene 2 protein; Short=KRG-2
Length = 970
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 156/618 (25%), Positives = 253/618 (40%), Gaps = 58/618 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQTICDFA 402
+ G V AG Q +L + + +HIQ F
Sbjct: 514 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQ---GFL 570
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ T + +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 571 AALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 687 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 746
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 630 ILLARLEYLRDTFQIKEG 647
L ++ YL T + G
Sbjct: 807 ELQEKMAYLDQTLSPRPG 824
>gi|332839867|ref|XP_003313867.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 3 [Pan
troglodytes]
Length = 972
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 159/623 (25%), Positives = 254/623 (40%), Gaps = 68/623 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + Q +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYMEQYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE-----------FLHIQT 397
+ G V AG Q + L M DE +HI+
Sbjct: 514 RYGAVFSSREQPKLAGFQQ-----FLQSLQPRMTEALAAPADESQASTPRPASPLMHIE- 567
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 568 --GFLAALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGG 621
Query: 458 TLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL VV S + D I P+V+ G P+ F R
Sbjct: 622 TMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKREL 681
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ- 570
P + G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E +
Sbjct: 682 PQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKS 741
Query: 571 --DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
V + LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 742 AHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 801
Query: 625 YTLSKILLARLEYLRDTFQIKEG 647
S L ++ YL T + G
Sbjct: 802 NIRSAELQEKMAYLDQTLSPRPG 824
>gi|325180138|emb|CCA14540.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 911
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 235/547 (42%), Gaps = 70/547 (12%)
Query: 198 MVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLE 257
M+Q A+++ Y YL DP + ++ ++++FDEAHN+++V +A S S + E
Sbjct: 1 MLQHADIIFVPYNYLTDPIARTSLGISIEN-AILIFDEAHNVESVASDAFSYSF---SCE 56
Query: 258 GATRNLSRINQ-----EIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDI 312
+ +S I E +R + ++ E +++ L L + A PS
Sbjct: 57 DISACVSEIQHFVFAVETKRILLSSETQINIESAEMLKALLLE--IGKALAEFSLSPSG- 113
Query: 313 LKEAVPGNIRRAEHFLHVLRRL-VQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLR 371
G +R E+ +R V + L +E+ + +T G ++ + R
Sbjct: 114 ------GLTKRGEYIFEFFKRFNVTFKTCPLVISTIEE------IIELTQRQGGEESSHR 161
Query: 372 FCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPD--- 428
RL M L E Q I +R + + I+ +R + P
Sbjct: 162 --NSRLDMFMTFLNTVFRSE-KEAQAI----------SRHYRVHIQETKQRRANTPKLFN 208
Query: 429 ----------PVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
V C L + + + ++++TSGTLSP+ R L +
Sbjct: 209 SFGNNTGKMTRVFNYWCFHPGLTFQDIRSKNVYNIILTSGTLSPLKTTIRELGIEFPIQL 268
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
K + VL++G +++ ++ RS P G +V V P+GI+ FF
Sbjct: 269 ENKHVIDASQAWVGVLSKGVTGKRLNSSYNYRSTPEYLSELGNTIVNFVRATPNGILVFF 328
Query: 538 VSYSYMDEIIATWNDS--GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-GAVF 594
SY+ +++ I+ W S I I + K VF+E ++ E + +D Y ++ + GAVF
Sbjct: 329 PSYTILEDSISFWQKSPCTIWIRIAKLKEVFVEPRNRTEFNVIVDEYHQSIKVKQEGAVF 388
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS-KILLAR--------LEYLRDTFQIK 645
F+V RG+V+EGIDF GR V++ G+PF T KI+L + E + ++
Sbjct: 389 FAVCRGRVSEGIDFANEKGRAVVITGLPFPPTKDPKIILKKGILDEATVAENETASCKLT 448
Query: 646 EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI------LSHL 699
+ A R Q +GRVIR + DYG +I D+R+ ++ L W+
Sbjct: 449 GNQWYIQQASRAVNQAIGRVIRHRHDYGAIILCDERFGLSQQQKCLSKWLQPFCYGYKSY 508
Query: 700 RDAHLNL 706
DAH++L
Sbjct: 509 GDAHISL 515
>gi|449448190|ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Cucumis sativus]
Length = 1054
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 137/266 (51%), Gaps = 16/266 (6%)
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
S+++TSGTLSP+D + + L + ++ + I V++ G ++ + R
Sbjct: 436 SIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSNQIWAGVVSVGPSGCSFNSSYWNRE 495
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG------ILKEIMQHKL 564
+ G +V IVPDG++ FF SY ++D+ I+ W + I + I +HK
Sbjct: 496 SEAYKLDLGNAIVNFARIVPDGLLVFFPSYYFLDQCISCWKNQSLSSSTTIWERISKHKK 555
Query: 565 VFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
IE + ++++Y + GAVFF+V RGKV+EG+DF H GR VI+ G+P
Sbjct: 556 PVIEPRQSSLFPSSIEDYMFKLEDTSSSGAVFFAVCRGKVSEGLDFADHAGRAVIITGMP 615
Query: 623 FQYTLSKILLARLEYL-------RDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGM 674
F + + YL R QI G D+ T A+R Q VGRVIR + DYG
Sbjct: 616 FASRNDPKVRLKRGYLDHQSQSQRGNCQIMTGEDWYTQQAMRAVNQAVGRVIRHRHDYGA 675
Query: 675 MIFADKRYSRHDKRSKLPGWILSHLR 700
+IF D+R++ ++S++ WI H++
Sbjct: 676 IIFCDERFAHSSRQSQISVWIQPHIK 701
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 68/283 (24%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+ + + V FP+D Y Q YM ++ ++L K + LLE PTGTGKT+ LL ++
Sbjct: 4 YTIRGIDVDFPFD-AYDCQLVYMEKVIQSLQEKCNALLESPTGTGKTLCLLCATLAWRKS 62
Query: 60 ---------------------VLS----KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ 94
VLS P++P ++Y TRT ++ + + ELK +Y+
Sbjct: 63 LGEFSSGRSVSNSQNIEGDPNVLSSQSTSPKHPT-IVYTTRTHSQLRQVIQELKKT-SYR 120
Query: 95 TRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRK------RTASWVRAL 145
K++ +G SR+ LC++ V R +A CRK + + V
Sbjct: 121 -------PKMVVLG--SREQLCIHEDVSLLRGRTQNNACRSLCRKSGKRHCKHYNRVSGY 171
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
ENP+ L ++DL GK G CPY+++R + + +++
Sbjct: 172 VKENPH------------------LGDEPIDIEDLVKIGKSFGPCPYYVSRELHKAVDIM 213
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
Y YL+D + E K SV++FDEAHN++++C +A S
Sbjct: 214 FAPYNYLIDRGYRKSLVLEW-KNSVLIFDEAHNLESICADAAS 255
>gi|302654465|ref|XP_003019039.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
gi|291182731|gb|EFE38394.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
Length = 859
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 32/299 (10%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLY-PRLLNFHP---VVSRSFKMSLTRDCICPMV 492
D + + + + ++V++ GT+ P+D Y LL++ P + + ++ + +D + +
Sbjct: 545 DPTSRFRELVEDARAVILAGGTMEPMDDYVNHLLSYVPREKIKTFTYGHVIPKDNLMAIP 604
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN- 551
+ RG D + FD R + + G+ + S++PDG+V FF SY Y+ ++ W+
Sbjct: 605 VDRGMDGTEFNFTFDQRRSEKMIISLGRTIARYCSVIPDGVVVFFPSYDYLATVLKVWSS 664
Query: 552 DSGILKEIMQHKLVFIETQDVVETTLA----------LDNYRKACDCGRGAVFFSVARGK 601
+SG+L + + K +F E Q T + L Y + D G+G + SV GK
Sbjct: 665 NSGLLNSLSRLKPIFHEPQSTGSTNGSANANTNTDSLLSQYSASVDAGKGGLLLSVMGGK 724
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY-------LRDTFQIKEGD------ 648
++EGI+F GR VI+ G+PF T + I A+L++ L D+ Q ++
Sbjct: 725 LSEGINFSDALGRGVIVVGLPFPNTRNAIWQAKLQHVEKKAYELADSSQPEDARRACGKA 784
Query: 649 ----FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
+ +R QC+GR IR K DY ++ D+RY + KLPGWI L H
Sbjct: 785 ASRAYYENTCMRTVNQCIGRAIRHKGDYAAILMIDRRYQTERIQGKLPGWIRGSLLKNH 843
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 46 TGKTIALLSLITSYV----LSKPENPVKLIYCTRTVHEMEKTLAELK------------- 88
+ T+ALL + L + + VK+IYC+RT ++ + E++
Sbjct: 164 SSDTLALLEKLKGPAQRIELEEGDESVKIIYCSRTHSQLIQFAQEMRRVMPISSIPPDLD 223
Query: 89 --LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L Q I L+SRK LC+N V + + +++ C L
Sbjct: 224 DNLKEEKQVNQQDEGEWIKHTPLASRKTLCINPSVRSLSSATAINERC----------LE 273
Query: 147 AENPNI---ETCEFFENYEKAASAAV----LPPGVYTLQDLRAFGKQQGWCPYFLARHMV 199
+ PN+ + C + + + L V ++DL G + G CPY+ +R +
Sbjct: 274 IQRPNVAAEQKCPYLPTKDNELKTSQFQDHLLARVNDIEDLPPLGTKMGICPYYASRTAM 333
Query: 200 QFA--NVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLE 257
+ + V+ Y LL ++ K SV+V DEAHN+ + + SV+V L
Sbjct: 334 RASATEVITLPYPLLLQQSAREALNLSA-KNSVIVIDEAHNLVDAIVNIHSVTVSLSQLR 392
Query: 258 GATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
A L++I RFK+ GR R +L+
Sbjct: 393 TA---LAQITTYARRFKSRLKGRNRVYIAQLI 421
>gi|215736805|dbj|BAG95734.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 596
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 150/600 (25%), Positives = 245/600 (40%), Gaps = 97/600 (16%)
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+K + V G ++DL GK+ G CPY+ AR MV+ A++VV YQ LL +
Sbjct: 8 QKEFKSEVSEQGALDIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESL 67
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
+ K SVV+ DEAHN+ + + + L LS + + RF++ L
Sbjct: 68 GLNL-KNSVVIIDEAHNLADSLTSMYNSKITSSQLNAI---LSHLEAYLNRFQSV----L 119
Query: 282 RAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLR-------RL 334
A R ++ L + L ++L D +A FL L +L
Sbjct: 120 GAGNRRYIQTLTV---LTRSFLRVLTSNQD---DACTMTSMTINQFLFSLDIDNINIVKL 173
Query: 335 VQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLH 394
QY++ E+ + K V+ I+Q + ++ L + +
Sbjct: 174 CQYVK---ESNIIHK------VSGYANKLNINQ-------DGVNHLSHQQQYDEGSSIAS 217
Query: 395 IQTICDFA-TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVV 453
QT+ DF +L+ G I+ P D L+ A + +V+
Sbjct: 218 FQTLADFLRSLLNCNDNGRIIVARKKFSGQPE--DAYLKFVMLCAEKIFLEITCDAYAVI 275
Query: 454 ITSGTLSPID-----LYPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKF 506
+ GTL PI+ L+P N P + F + + + I P+ +TRG +
Sbjct: 276 LAGGTLQPIEETRLRLFP---NLPPSDIKFFTCNHIVPPESILPIAVTRGPSGKAFDFSY 332
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
RS + G+ L +V+ VP+G+V FF SY Y + W SG++ +I + K VF
Sbjct: 333 SSRSSHTMIEELGRFLCNVVTTVPEGVVMFFASYEYERFVYDAWAASGMISKISKKKHVF 392
Query: 567 IETQDVVETTLALDNYRKAC-DCGR--------GAVFFSVARGKVAEGIDFDRHYGRLVI 617
E ++ V+ + L+ Y++A C + GA+ +V GK++EGI+F GR V+
Sbjct: 393 REPKNSVDVEMTLNKYKEAIQSCSKSSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVV 452
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQ--IKEGDFLT-------------FDALRQA---- 658
M G+P+ L ++Y+ + + + GD + FD LR+
Sbjct: 453 MVGLPYPSPSDVELTETIKYIENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGG 512
Query: 659 ------------AQCVGRVIRSKADYGMMIFADKRYSRHDKR-------SKLPGWILSHL 699
Q +GR IR DY M+ D RY+ KLP WI + L
Sbjct: 513 REYYENLCMKAVNQSIGRAIRHANDYAAMLLVDSRYAHTSSNRSSSSPTDKLPQWIKTRL 572
>gi|29792240|gb|AAH50522.1| DDX11 protein [Homo sapiens]
Length = 970
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 156/618 (25%), Positives = 252/618 (40%), Gaps = 58/618 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 278
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDME 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 397
Query: 239 IDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA-LRG 296
+ + SV V Q + ++ L + + +R KA + L+ L + +A L G
Sbjct: 398 LIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGG 457
Query: 297 NL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVE 348
N+ PN LS +D L ++ NI + V R + + R E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKLFGFTE 513
Query: 349 KEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQTICDFA 402
+ G V AG Q +L + + +HIQ
Sbjct: 514 RYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQGFLAAL 573
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
T+ R +I+ R + L+ + ++ V ++VVI GT+ P+
Sbjct: 574 TMANQDGR---VILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPV 626
Query: 463 -DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
D +LL VV S + D I P+V+ G P+ F R P +
Sbjct: 627 SDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMD 686
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ---DVV 573
G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E + V
Sbjct: 687 EVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVE 746
Query: 574 ETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
+ LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF S
Sbjct: 747 QVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSA 806
Query: 630 ILLARLEYLRDTFQIKEG 647
L ++ YL T + G
Sbjct: 807 ELQEKMAYLDQTLSPRPG 824
>gi|149712588|ref|XP_001490646.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Equus
caballus]
Length = 906
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL + VV S + D I P+V+ G
Sbjct: 609 VVKECRAVVIAGGTMQPVSDFREQLLACAGVDAERVVEFSCGHVIPPDNILPLVVCSGPS 668
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W+ SG+L
Sbjct: 669 NQQLEFTYQQRELPQMMTETGRILCNLCNVVPGGVVCFFPSYEYQRQVHAHWDKSGLLAR 728
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K CG+ GA+ SV GK++EGI+F +
Sbjct: 729 LAVRKKIFQEPKRANQVEQVLLEYSKCIQCCGQMGSTMTGALLLSVVGGKMSEGINFSDN 788
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T Q+ G L + ++ Q +GR
Sbjct: 789 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRTPGQVPPGKALVENLCMKAVNQSIGRA 848
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D+RY+R +KLP WI RD + + A+ R+F R+ +
Sbjct: 849 IRHQKDFASIVLLDQRYARPPILAKLPAWI----RDRVEIKTTFGPAIAAMRKFHRERSG 904
Query: 725 P 725
P
Sbjct: 905 P 905
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V +
Sbjct: 226 TKIYYCSRTHSQLSQ------FVHEVQKSPFGKDTRLVSLG--SRQNLCVNEDVRHLGSV 277
Query: 128 DSVDAAC---------RKRTASWVRALAAENPNIETCEFFENYEKAA--SAAVLPPGVYT 176
++ C RK A + TC F+ NYE+ VL V
Sbjct: 278 QLINDRCVEMQRNKHERKSEAEEEKPKKRRQEPRATCPFY-NYEQLQLLRDEVLVE-VKD 335
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++ L GK+ CPY+ +R + A +VV YQ LL +Q + VVV DEA
Sbjct: 336 IEQLVTLGKEAHACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQ-VVVIDEA 394
Query: 237 HN-IDNV 242
HN ID +
Sbjct: 395 HNLIDTI 401
>gi|296804606|ref|XP_002843155.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
gi|238845757|gb|EEQ35419.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
Length = 854
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 32/283 (11%)
Query: 450 QSVVITSGTLSPIDLY-PRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTK 505
++V++ GT+ P+D Y LL++ P V + ++ + +D + + + RG D + +
Sbjct: 555 RAVILAGGTMEPMDDYVDHLLSYVPREKVKTFTYGHVIPKDNLIAIPVARGMDNVEFNFT 614
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND-SGILKEIMQHKL 564
FD R + + G+++ S++PDG+V FF SY Y+ ++ W+ SG+L + + K
Sbjct: 615 FDQRQSEKMITSLGQMIARFCSVIPDGVVVFFPSYDYLATVLRVWSSTSGVLDNLSRLKP 674
Query: 565 VFIETQDVVETTLA----------LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGR 614
+F E + L Y + D G+G + SV GK++EGI+F GR
Sbjct: 675 IFHEAPSDSSGSNNNNTNTNTDSLLQQYSASIDAGKGGLLLSVMGGKLSEGINFSDALGR 734
Query: 615 LVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEGDFLTFD----------------ALRQ 657
VI+ G+PF T + I A+L+++ R + + + + +R
Sbjct: 735 GVIVVGLPFPNTRNAIWQAKLQHVERRAYDLADASLSAAERRARGKQASRAYYENTCMRT 794
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
QC+GR IR K DY ++ DKRY + KLPGWI LR
Sbjct: 795 VNQCIGRAIRHKEDYAAILMIDKRYQTERIQGKLPGWIRGSLR 837
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 46 TGKTIALLSLITSYVLSKP---ENPVKLIYCTRT-------VHEMEKTLA------ELKL 89
+ T+ALL + V E VK+IYC+RT EM + L +L
Sbjct: 165 SADTLALLERLKGPVRQAEDDDEETVKIIYCSRTHSQLIQFAQEMRRVLPVSSVPPDLDE 224
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAAC----RKRTASWVRA- 144
+ + I L+SRK LC+N V + + +++ C R A+ R
Sbjct: 225 KQDEKEGENEKGEWIKHTPLASRKALCINPSVRSLASATAINERCLEIQRPNVAAEHRCP 284
Query: 145 -LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF-- 201
L A+N ++T +F ++ L V ++DL G + G CPY+ R ++
Sbjct: 285 YLPADN-ELKTSQFQDH---------LLARVSDIEDLPPLGTRIGICPYYATRTAMRAPA 334
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
VV Y LL ++ +K SV++ DEAHN+ + + SV+V L A
Sbjct: 335 TEVVTLPYPLLLQQSAREALNLSAKK-SVIIIDEAHNLVDAIVNIHSVAVSLAQLRTA-- 391
Query: 262 NLSRINQEIERFKATDAGRLRAEYNRLV 289
L++I +RFK GR R +L+
Sbjct: 392 -LAQITTYAKRFKTRLRGRNRVYIAQLI 418
>gi|19173439|ref|NP_597242.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
gi|19171028|emb|CAD26418.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
Length = 619
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 158/697 (22%), Positives = 293/697 (42%), Gaps = 151/697 (21%)
Query: 17 IYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK-----PENP---- 67
+Y Q + + +R +D + PTGTGKT++LLS + Y+ + P N
Sbjct: 6 LYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDYIGADEAGLDPRNRALEQ 65
Query: 68 -------VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+K++YCTRT ++ + + ELK L A ++ L SR+ C+N R
Sbjct: 66 ALFQGGRMKVLYCTRTHTQLTQAINELKKLE----------AGCNSVVLGSRRIYCLNER 115
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + D+V+ C++ + + C+ F+ + GV ++DL
Sbjct: 116 VCQNRSSDAVNEGCKEAVKEGLCVF------YDGCDLFDGH-----------GVLDVEDL 158
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ-KESVVVFDEAHNI 239
A G+ + CPY++++ Q ++V YQ L + G S ++ +ES+VV DEAHNI
Sbjct: 159 VAMGRNERLCPYYVSKRYSQQCDIVFLPYQLLFARE--GRKSMDIDVRESIVVVDEAHNI 216
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLP 299
+ ++ + + T ++R + ++ ++ R++ E G L
Sbjct: 217 YDSVVQMNTACILFST-------MNRCIKAMQLYRERHGRRMKRE-----------GQL- 257
Query: 300 NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI 359
E + +LRR+ + G E+V + V V+
Sbjct: 258 -------------------------ETVVEILRRIKGF--GDEYCEDVGEGEGVMGVSEF 290
Query: 360 TAHAGI---------DQKTLRFCYERLHSLML--TLEITDTDEFLHIQTICDFATLVGTY 408
AGI D + RL +L+I + +FL + T+ D + +
Sbjct: 291 LLKAGIEDFNMLEVEDYIVTSGIFRRLEGFGSNPSLQIPEISKFLGLLTVSDRSGRIFYS 350
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
+RG ++ + DAS+ + V + +++++ GT+ P+D +
Sbjct: 351 SRG-------------------VRFTPLDASMYFEDVLE-CRALLLAGGTMEPVDQLMSV 390
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSI 528
L R F + +V+ G + F+ R P ++ + + +
Sbjct: 391 LGKKS--PRYFSYGSVCNDFLALVVGSGPSGREIIVNFETRERPESIKDVTSSISNLSNA 448
Query: 529 VPD-GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV-ETTLALDNYRKAC 586
V D G+VCF S +Y+ GIL+E + T+ + E + + Y A
Sbjct: 449 VKDGGMVCFLPSKAYL----------GILRERCGD---MVGTKKALYEDLITFEGY--AE 493
Query: 587 DCGRG-AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK 645
+ GRG + F+V G+++EG++F RL+++ GVP+ LE L++ +
Sbjct: 494 EAGRGPCILFAVMGGRLSEGVNFGDGLCRLLVVVGVPYP-------TQDLE-LKERAKFN 545
Query: 646 EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
G++ T A+R Q +GR +R + DY +++ DKRY
Sbjct: 546 GGEYATSIAMRTVNQTLGRALRHRNDYAVLVLLDKRY 582
>gi|194764312|ref|XP_001964274.1| GF20802 [Drosophila ananassae]
gi|229891621|sp|B3MSG8.1|RTEL1_DROAN RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190619199|gb|EDV34723.1| GF20802 [Drosophila ananassae]
Length = 994
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 161/325 (49%), Gaps = 14/325 (4%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
++ C + ++ + + + +SV++TSGTL+P L P + V++ + + +
Sbjct: 453 IINFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQS 510
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ P+ + + R +P + G+ ++ + +VPDG++ FF SY +++
Sbjct: 511 QVYVKIIGTGPDRQPLISNYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSYPMLNKC 570
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GA F +V RGKV+EG+
Sbjct: 571 VDAWQASGLWADIASKKPIFLEPRGKDQFTSTMEEFYQAIRDSKGACFMAVCRGKVSEGL 630
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQC 661
DF GR VI+ G+PF ++ + YL R+ + ++ +A R Q
Sbjct: 631 DFADRNGRAVIITGLPFPPLKDPKVILKRRYLESNRTRENQLLSGNEWYNLEATRAVNQA 690
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
+GRVIR + DYG ++ D R+ + +L WI HL D + R+F +
Sbjct: 691 IGRVIRHRNDYGAILLCDSRFKDAAQVQQLSKWIRGHLGDRPQCSPFGPIVRELRQFFKN 750
Query: 722 ----MAQPYDKAGSIGRKTLLSQAD 742
M QP ++ +T++ + D
Sbjct: 751 AETTMKQPDERESGAPLETVIKKED 775
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 63/299 (21%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK---- 63
+ V+FP++ YP Q +YM ++ + L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEH 67
Query: 64 ---------------------PE--------------NPVKLIYCTRTVHEMEKTLAELK 88
PE K+IY +RT ++ + + ELK
Sbjct: 68 QQQMIKLDKGADLLGGGAGGGPELSDLAKTMGKANNWGVPKVIYASRTHSQLTQAMRELK 127
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
R ++ L SR LC++ V + C+ R S
Sbjct: 128 RTAYSNMR---------SVVLGSRDQLCIHPEVSREVGNSNKVNMCKLRVHS-------- 170
Query: 149 NPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+TC F E K P + ++DL G++ CPY+ ++ +V A++
Sbjct: 171 ----KTCTFQLRVESKKDHPDFRGPSIMDIEDLIKVGQKLKMCPYYASKELVPQADITFM 226
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLDPK E+ ++V+ DEAHNI+ +C E+ SV ++ + A +++ I
Sbjct: 227 PYNYLLDPKARKANKIEL-GNTIVILDEAHNIEKICEESASVQIKSSDVAIAIEDVTHI 284
>gi|380006443|gb|AFD29612.1| RTEL1 [Schmidtea mediterranea]
Length = 1057
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 9/279 (3%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C A +K + +S+++TSGTL PI+ ++ V + D +
Sbjct: 457 VLSFWCMTAGRTMKSLAGCEVRSIILTSGTLYPIETLKLDMDIKFEVELRNSHVINADQM 516
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V T+G+D P+++ + R + G ++ + I+P G++ F SY M + I
Sbjct: 517 MVSVCTKGADGEPLNSSYLTREKISYTNSLGNSILNLSKIIPRGLLVVFPSYGMMRKCIE 576
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDN-YRKACD--CGRGAVFFSVARGKVAEG 605
W I +MQHK + +E QD + TLA++ Y K D +G++ SVARGK++EG
Sbjct: 577 RWESCDIYNSMMQHKQLIVEPQDKTKFTLAMEQFYSKNSDPLSNKGSILLSVARGKISEG 636
Query: 606 IDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD-----TFQIKEGDFLTFDALRQAAQ 660
+D H GR VI+ G+P+ + + ++ +L D F I + A R Q
Sbjct: 637 LDLSDHQGRGVIVVGLPYPSMMDPRIRLKMSFLDDRLKLFKFGIDGRCWYKQQAYRAVNQ 696
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GRVIR D+G + D+R++ D R +LP W+ S++
Sbjct: 697 SIGRVIRHSRDFGAIYLFDERFATADSRFQLPLWLQSNI 735
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 58/306 (18%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY------VL 61
V++ FP++ Y Q YM ++ +L + +LE PTGTGKT+ LL ++ V
Sbjct: 9 VSIDFPFEP-YACQIIYMEKVIESLKDGKNAILESPTGTGKTLCLLCAALAWQDHVKKVT 67
Query: 62 SKPENPV-----------------------------KLIYCTRTVHEMEKTLAELKLLHN 92
+ E+ + K+IY +RT ++ + + LK
Sbjct: 68 TNSEDEILLHLNSNGNQYWNKLKKSQLNISKINVVPKIIYSSRTHSQLSQCINALKRTQ- 126
Query: 93 YQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNI 152
Y R +G A SR+ LC+N +V+ E+ + C+ R +
Sbjct: 127 YCDRKVGMIA--------SREQLCINPKVMNLESNTAKIYGCKSRVKT------------ 166
Query: 153 ETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYL 212
C F+ +EKA + ++DL GK++ CPYFL+R M A++ Y YL
Sbjct: 167 RKCFFYNQFEKAKEILSSETKIADIEDLLTIGKKKSVCPYFLSREMFDSADITFMPYNYL 226
Query: 213 LDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIER 272
LD K+ + + + K ++V+FDEAHNI+ VC ++ SV + + L + + I
Sbjct: 227 LDSKIRRLYNINL-KGNIVIFDEAHNIEQVCEDSASVQLTSINIASCIEELKVLGEFIYS 285
Query: 273 FKATDA 278
++TDA
Sbjct: 286 IQSTDA 291
>gi|50726319|dbj|BAD33894.1| putative BRCA1 interacting protein C-terminal helicase 1 [Oryza
sativa Japonica Group]
Length = 1366
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 191/845 (22%), Positives = 330/845 (39%), Gaps = 162/845 (19%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALD-----AKGHCLLEMPTGTGKTIALLSLI 56
++++ V V FPY Y Q ++M + LD + H LLE PTGTGK+++LL
Sbjct: 24 VYQVGGVPVEFPY-KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSA 82
Query: 57 TSYVLSKP--------------------------------------ENPVKLIYCTRTVH 78
++ P +N + Y TRT
Sbjct: 83 LAWQRHYPLRAPPAAAPDPFLHGGGFVPDDTQKQATPGVPEKATRKKNVPTIYYATRTHA 142
Query: 79 EMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRT 138
++ + + E + +Y+ R +AI L+SRK+ CVN V + N +D C+
Sbjct: 143 QITQVVREYRKT-SYRVR--------MAI-LASRKHYCVNKNVCMSGN---IDELCK--- 186
Query: 139 ASWVRALAAENPNIETCEFFENYEKAASAAVLPPG----VYTLQDLRAFGKQQGWCPYFL 194
+ + + + C ++N +K + L G V+ ++DL G++ CPYF
Sbjct: 187 -------SLLDDSAQGCPEYKNAQKLSRHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFA 239
Query: 195 ARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQ 254
A+ M + A +V Y YL+ P V + ++ + S++V DEAHNI+++ +A S V +
Sbjct: 240 AQTMAEAAQLVFCPYNYLISPIVRRAMDIDI-RGSIIVLDEAHNIEDIARDAGSFDVDEE 298
Query: 255 TLEGATRNLSRINQEIERFKATDA-GRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDIL 313
+ L + QE+E +A ++ + +++GL N W+
Sbjct: 299 S-------LLFLRQELEGLVTDEAVAKIYEPLHEVIQGL-------NGWIDE-------- 336
Query: 314 KEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG--PVSF------------VASI 359
GN + F H + G + ++ G PV+F AS
Sbjct: 337 ----QGNNLQKNEFEHP----ASFWTGEEAMKELKYAGITPVNFPVLQECATKAIKAASD 388
Query: 360 TAHAGI-----DQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSI 414
G+ TL + L D L +Q FA G + +
Sbjct: 389 AESEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDYQLALQR---FAKREGANVMSYDL 445
Query: 415 IIEPFDERMPHIP-DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
II + I V+ L C + ++ + + D SV++TSGTLSP+ + L
Sbjct: 446 II--CNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQF 503
Query: 474 VVSRSFKMSLTRDC-ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
+ D + VL+ G ++ + ++ G L E+ +VP G
Sbjct: 504 EACMEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEICRVVPGG 563
Query: 533 IVCFFVSYSYMDEIIATWNDS--------------GILKEIMQH---KLVFIETQDVVET 575
+ FF SY+ ++++ W+ + G I+ K + +V+
Sbjct: 564 ALVFFPSYNLLEKLQRRWSQTEPRGSTEELEPVLKGYYNAILGKAPPKKGRGGAKQIVKN 623
Query: 576 TLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI-------MFGVPFQYTLS 628
+ D+ +++ GA F +V RGKV+EGIDF R+V+ +F P +
Sbjct: 624 RVTKDSSQESAK--GGAAFLAVCRGKVSEGIDFSDDKARVVVSFVFSSYVFYAPERINDV 681
Query: 629 KILLARL---EYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
++ L + Y + ++ A R Q GR IR K DYG +I D+RY
Sbjct: 682 QVKLKKRYNDSYKSSKDLLSGNEWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEE 741
Query: 686 DKRSKLPGWILSHLRDAHLNLSTDMAL----HIAREFLRKMAQPYDKAGSIGRKTLLSQA 741
+ W+ + +R+ T L A E ++ AQ + L SQ
Sbjct: 742 RNIVYISKWLRNSIRNCGTFQETMDGLTRFFQNAEEQIKIKAQGVSPKDRLDACVLPSQG 801
Query: 742 DLEKM 746
D K+
Sbjct: 802 DKRKL 806
>gi|195448955|ref|XP_002071885.1| GK24923 [Drosophila willistoni]
gi|229891630|sp|B4NDG5.1|RTEL1_DROWI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194167970|gb|EDW82871.1| GK24923 [Drosophila willistoni]
Length = 998
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 145/279 (51%), Gaps = 12/279 (4%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
V+ C + ++ + + + +SV++TSGTL+P L P + V++ + + +
Sbjct: 459 VINFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQS 516
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + F R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 517 QVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKC 576
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GA F +V RGKV+EG+
Sbjct: 577 VDAWQTSGLWADIAAKKPIFLEPRGKDQFTTTMEEFYQAIRDSKGACFMAVCRGKVSEGL 636
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQ 660
DF GR VI+ G+P+ ++ + YL + + KE LT DA R Q
Sbjct: 637 DFADRNGRAVIITGLPYPPLKDPKVILKRRYL-EANRTKENQLLTGQEWYNLDATRAVNQ 695
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GRVIR + DYG ++ D R+ + + +L WI HL
Sbjct: 696 AIGRVIRHRHDYGAILLCDSRFQDNSQVQQLSKWIRGHL 734
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 131/301 (43%), Gaps = 65/301 (21%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK---- 63
+ V+FP++ Y Q ++M ++ L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEQ 67
Query: 64 -----------------PENPV--------------------KLIYCTRTVHEMEKTLAE 86
P V K+IY +RT ++ + + E
Sbjct: 68 QKQIRKLQDAANNTKVGPTGIVPGEAAELALTVGKANNWGVPKVIYASRTHSQLTQAMRE 127
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
LK A + ++ L SR LC++ V+ + + C+ R S
Sbjct: 128 LKR---------SAYAGMRSVVLGSRDQLCIHPEVMREQGNSNKVNMCKMRVHS------ 172
Query: 147 AENPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+TC F E K P + ++DL G++ CPYF ++ +V A++
Sbjct: 173 ------KTCSFQLRVESKKDHPDFRGPSIMDIEDLVKVGQKLKMCPYFASKELVNDADIT 226
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLDP +A +K ++V+ DEAHNI+ +C E+ SV ++ + A +++
Sbjct: 227 FMPYNYLLDP-MARKANKIELSNTIVILDEAHNIEKICEESASVQIKSSDVAVAIEDVTH 285
Query: 266 I 266
I
Sbjct: 286 I 286
>gi|332232623|ref|XP_003265503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4
[Nomascus leucogenys]
Length = 880
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 130/270 (48%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 583 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS 642
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + +VP G+VCFF SY Y+ ++ A W G+L
Sbjct: 643 NQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLDR 702
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y + CG+ GA+ SV GK++EGI+F +
Sbjct: 703 LAARKKIFQEPKSAHQVEQVLLAYSRCIQGCGQERGRVTGALLLSVVGGKMSEGINFSDN 762
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+PF S L ++ YL T Q G L + ++ Q +GR
Sbjct: 763 LGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRA 822
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 823 IRHQKDFASIVLLDQRYARPPVLAKLPAWI 852
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 201 TKIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVKSLGSV 252
Query: 128 DSVDAAC----RKRTASWVRALAA-----ENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R A C F+ + + V ++
Sbjct: 253 QLINDRCVDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALADVKDIE 312
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 313 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 371
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
+ + SV V L A S++ Q +ER+
Sbjct: 372 LIDTITGMHSVEVSGSQLCQAH---SQLLQYMERY 403
>gi|440487319|gb|ELQ67113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae P131]
Length = 1493
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 169/730 (23%), Positives = 283/730 (38%), Gaps = 142/730 (19%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILA------------IGLSSR 112
E VK+ Y +RT ++ + ++EL+ N+ + G L+ + LSSR
Sbjct: 771 EENVKIFYTSRTHSQLTQFISELRR-PNFPSSFPGADEPSLSKTETGTRECVKHVPLSSR 829
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCE-FFENYE-KAASAAVL 170
+ LC+N V + +++ C + S ++ P + + + E ++ + AS A +
Sbjct: 830 QKLCINPAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPSQDNLSETHQFRDASLATI 889
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
P ++D GK CPY+ R + A +V Y LL + E+Q SV
Sbjct: 890 P----DIEDAHKLGKSLQVCPYYATRTAIPGAEIVTLPYPLLLQKSARDALGIELQG-SV 944
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVE 290
VV DEAHNI + S +R LE R ++ +RF +L+AE +V
Sbjct: 945 VVVDEAHNIMDAIAGVHSAEIR---LEDLRRGREMLSIYAKRF----GKKLKAENRIMVG 997
Query: 291 GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV-------LRRLVQYLRGRLE 343
+A + WL L+++V I L + L+ Y++ E
Sbjct: 998 QVARVIQGLSEWLER------ALEQSVEHGIIDPRVLLKTKGMDQIDMFALISYIQ---E 1048
Query: 344 TENVEK-EGPVSFVASITAHAGIDQKTLRFC--YERLHSLMLTLEITDTDEFLHIQTICD 400
++ K E + V + + +KT+R L S +L L T+ + + +
Sbjct: 1049 SKLAYKIESYAAHVDELEEASKGQKKTIRTSPVLHNLSSFLLALTNLSTEGRIFFEKV-- 1106
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
+V ++ + I L + A + ++V++ GT+S
Sbjct: 1107 ---VVDGGSKQYDI---------------KLSYMLLSPTYAFSSIATSARAVILAGGTMS 1148
Query: 461 PIDLYP-RLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTK------FDMRS 510
P Y L HP + S + +C L P F R
Sbjct: 1149 PFQDYETHLFPSHPQHKITKLSCGHVIPSSNLCVWTLASMRPATPAGNSDLFEFSFQKRR 1208
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA----------TWNDSGILKEIM 560
D + + G ++ + S VPDG+V FF SY Y+DE++A T +S I ++
Sbjct: 1209 DKTMIQQLGTAILNICSAVPDGVVVFFPSYGYLDEVVAALQQKLAATGTAPNSSIWDKLQ 1268
Query: 561 QHKLVFIETQDVVETTLALDNYRKA------------CDCGRGAVFFSVARGKVAEGIDF 608
K VF ET+ + L++Y A GA+ SV GK++EGI+F
Sbjct: 1269 SRKAVFRETKG-GSSDQVLEDYSNAILGEKDAEGKQRSPSQNGALLLSVVGGKMSEGINF 1327
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT-----FQIKEG---------------- 647
GR V++ G+P+ S AR+EY+ + + G
Sbjct: 1328 SDRLGRCVVIVGLPYPNVASPEWKARMEYIDSSTVAGLLDKQNGTTAGDVSARESTPSAT 1387
Query: 648 ----------------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
DF +R Q +GR IR + DY ++ D+R+
Sbjct: 1388 VTKPPSTITREQAAAAGKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIVLLDRRFGTE 1447
Query: 686 DKRSKLPGWI 695
R+KLPGWI
Sbjct: 1448 RIRAKLPGWI 1457
>gi|224054204|ref|XP_002298143.1| predicted protein [Populus trichocarpa]
gi|222845401|gb|EEE82948.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 167/333 (50%), Gaps = 28/333 (8%)
Query: 427 PDPVLQLSCHDASLAVKPVFDRF--QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
P L C + +A++ F R +S+++TSGTLSP+D + + L + ++
Sbjct: 409 PSRTLSWWCFNPGIAMQE-FSRMGVRSIILTSGTLSPLDSFAQELKLDFPIRLENPHVIS 467
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ I V+ G +++ + R + G +V IVPDG++ FF SY +D
Sbjct: 468 SNQIWAGVVPAGPSGRSLNSSYRTRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYLLD 527
Query: 545 EIIATW------NDSGILKEIMQHKLVFIETQDVVETTLALDNY-RKACDCG-RGAVFFS 596
+ I+ W N + I + I +HK +E + LA+++Y K D GAVFF+
Sbjct: 528 QCISCWKNMSQANSTTIWERICKHKKPVVEPRQSSLFPLAIEDYLAKLKDTSTSGAVFFA 587
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQY-TLSKILLARLEYL-------RD-----TFQ 643
V RGKV+EG+DF H GR V++ G+PF T K+ L R EYL RD Q
Sbjct: 588 VCRGKVSEGLDFADHAGRAVVITGMPFAMRTDPKVRLKR-EYLDGQTHSQRDGCKMLKLQ 646
Query: 644 IKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA 702
+ G ++ A R Q VGRVIR + DYG +IF D+R+ ++++++ WI H++
Sbjct: 647 VLSGEEWYGQQASRAVNQAVGRVIRHRYDYGAIIFCDERFEHRNRQTQISLWIQPHIK-C 705
Query: 703 HLNLSTDMALHIAREFLRKMAQPYDKAGSIGRK 735
H D+ ++R F ++ K SI R+
Sbjct: 706 HSKFG-DVVFTLSRFFRDGGSRDAAKLRSIPRE 737
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 57/278 (20%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+K+ + V FP++ Y Q YM ++ ++L K + LLE PTGTGKT+ LL ++
Sbjct: 5 YKIRGIDVDFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 63
Query: 60 -------------------------VLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQ 94
S+ N ++Y +RT ++ + + ELK +Y+
Sbjct: 64 LGGFSTGKIERNGRIAGGKLDIVPSSQSEDRNLPTIVYASRTHSQLRQVIQELKR-SSYR 122
Query: 95 TRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIET 154
+ + L SR+ LC++ V + R + + L +
Sbjct: 123 PK---------MVILGSREQLCIHEEV----------SLLRGKVQNNACHLICKTRGKRQ 163
Query: 155 CEFFENYEKAASAAVLPPGV----YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQ 210
C +Y + A P + ++DL G+ G CPY+++R + + +++ Y
Sbjct: 164 CT---HYSRVADYVKCNPHLGDEPVDIEDLVNIGRTFGPCPYYISRELHKVVDILFAPYN 220
Query: 211 YLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
YL+D ++ + S+++FDEAHN++++C +A S
Sbjct: 221 YLIDRGNRKSLAIDWDN-SILIFDEAHNLESLCADAAS 257
>gi|303390346|ref|XP_003073404.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303302550|gb|ADM12044.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 619
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 161/688 (23%), Positives = 298/688 (43%), Gaps = 133/688 (19%)
Query: 17 IYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV-LSKPENPVK------ 69
+Y Q ++ + +R +D + PTGTGKTI+LLS + Y+ + + E +
Sbjct: 6 LYESQKLFIEDARRVIDGGSVGIFSSPTGTGKTISLLSAVADYMDIEETEMDCRNRMLEK 65
Query: 70 ---------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ YCTRT ++ + + ELK L + ++ L SRK C+N
Sbjct: 66 ILFQGSRKAVFYCTRTHTQLAQAINELKKL----------GVRCNSVVLGSRKIYCLNEE 115
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+ ++ D ++ AC++ L + CE F+ Y GV ++DL
Sbjct: 116 IRKYKSSDEMNEACKEAVKEGKCMLH------DGCEEFDGY-----------GVIDVEDL 158
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ-KESVVVFDEAHNI 239
A G ++ +CPY+ AR Q ++V YQ L + G S ++ K S+VV DEAHNI
Sbjct: 159 LATGGRERFCPYYTARSYSQQCDIVFLPYQLLFTRE--GRKSADIDVKGSIVVVDEAHNI 216
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR--AEYNRLVEGLALRGN 297
+ I+ + S+ T++ R + +E +K GR++ ++ R++E L G+
Sbjct: 217 YDSVIQMNTASISFGTVD-------RYVKAMELYKKRYGGRMKRDGQFERVMEVLKKIGS 269
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
+ + D E V G FL L +E N+ + +
Sbjct: 270 FRCVHCRD--MEGD---EGVMG----VSEFL---------LGAGIEDFNMLE------IE 305
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
A +GI +K F + L +++ + +FL + T+ D + + ++G
Sbjct: 306 DYIAVSGISRKLEGFEKD------LNMKLPEISKFLSLLTMSDKSGRILYSSKG------ 353
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
++ + DAS+ + V + +S+++ GT+ PID L
Sbjct: 354 -------------IKFTPLDASMYFEDVLE-CRSLLLAGGTMEPIDQLVSALRKRSPKYF 399
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV-PDGIVCF 536
S+ S+ +D + P+V+ G + ++ R P ++ ++ + + V G+VCF
Sbjct: 400 SYG-SVCKDFL-PIVIRSGPSGKEIVVNYETRESPMSIKDVASSILNLSNAVRSGGMVCF 457
Query: 537 FVSYSYMDEIIATWNDS-GILKEIMQHKLVFIE-TQDVVETTLALDNYRKACDCGRGAVF 594
S +Y+ + D+ G K + + + F E Q+V R C +
Sbjct: 458 LPSKAYLKILKEACGDTIGSKKALYEDSVTFEEYVQEV---------RRSPC------IL 502
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDA 654
F+V G ++EG++F+ RL+++ GVP+ LE L++ + + T A
Sbjct: 503 FAVMGGSLSEGVNFNDSLCRLLVVVGVPYPSQ-------DLE-LKERAKFNGSGYTTAIA 554
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRY 682
++ Q +GR +R + DY +++ DKRY
Sbjct: 555 MKTVNQALGRALRHRDDYAVLVLLDKRY 582
>gi|380495771|emb|CCF32142.1| DNA repair helicase [Colletotrichum higginsianum]
Length = 896
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 173/716 (24%), Positives = 284/716 (39%), Gaps = 127/716 (17%)
Query: 68 VKLIYCTRTVHEMEKTLAELK-----------LLHNYQTRHLGPAAKILAIGLSSRKNLC 116
+K+ Y +RT ++ + + EL+ ++ + + + LSSR+ LC
Sbjct: 205 IKIYYTSRTHSQLTQFIHELRRPEFPSSIPSSIVQGQREDDRRSKEPVKHLPLSSRQKLC 264
Query: 117 VNSRVLAAENRDSVDAAC---RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG 173
+N V + +++ C +K A + NI F + + A LP
Sbjct: 265 INPSVARLGSLSAINDRCSELQKPKAKDKCPYTLKEDNITQTHQFRD----TAHATLP-- 318
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
++DL GK+ CPY+ +R + A +V Y LL + +++ ++V+
Sbjct: 319 --DIEDLYHLGKKLSVCPYYASRAAIAGAEIVTLPYPLLLQKNARDALGIKLEG-NIVIV 375
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLVE 290
DEAHNI + + V+ L A + L ++RF G R + R++E
Sbjct: 376 DEAHNIMDAVANVYASEVKLSELRRARQMLGVY---VKRFGKKLKGENRVMVGQVGRVIE 432
Query: 291 GLALRGNLPNAWL---SNPALPSDILKEAVPGNIRRAEHFLHV-LRRLVQYLRGRLETEN 346
GL+ W+ S P I+ V + R + + L RL+QY++
Sbjct: 433 GLS-------EWMDAQSKLKSPQGIVDSKV---LLRCKGVDQINLFRLIQYIQESKLAYK 482
Query: 347 VEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVG 406
+E S+VA + A + H T LHI + F +
Sbjct: 483 IE-----SYVAHVEEEAA----------DASHGKGPPRSST---PVLHI--LSSFLISLT 522
Query: 407 TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYP 466
+ I E P I L LS + A + ++V++ GT+SP D Y
Sbjct: 523 NLSSEGRIFYEKLATSPPDIQLSYLLLS---PTHAFSSIATSARAVILAGGTMSPFDDYK 579
Query: 467 RLLNFHPVVSRSFKMSLTRDCICP----MVLTRGSDQL-----PVST---KFDMRSDPGV 514
L P + S +L+ + P V T Q P ST F R D +
Sbjct: 580 SHL--FPYLPESKLTTLSCGHVIPPSNLCVWTLAGSQPGLKRDPNSTFEFSFQRRGDMDM 637
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND------------SGILKEIMQH 562
+ G + + ++VPDG+V FF SY Y++E++ W + + + Q
Sbjct: 638 KGSLGLAIFNLCNVVPDGVVVFFPSYGYLEEVVTAWKGVATRQGQTPQGATSLWDRLQQR 697
Query: 563 KLVFIETQ-----DVVE--TTLALDNYRK----ACDCGRGAVFFSVARGKVAEGIDFDRH 611
K V ET+ +V+E + L + R+ A RGA+ SV GK++EGI+F
Sbjct: 698 KEVLSETRGGSSDEVLESYSRAILGDGREPKPGAAGKPRGALLLSVVGGKMSEGINFSDR 757
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----------------------QIKEGD 648
GR VI+ G+P+ S A+ EY+ T + D
Sbjct: 758 LGRCVIIVGLPYPNINSPEWKAKTEYIETTTVQRLTTDSSGTTKMSRDEALAVAKQAARD 817
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR-DAH 703
F +R Q +GR IR + DY ++ D+R+ R KLPGWI L D+H
Sbjct: 818 FYENACMRAVNQSIGRAIRHQGDYAAIVLVDRRFGTDRIRGKLPGWIRGGLDGDSH 873
>gi|350399366|ref|XP_003485501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Bombus
impatiens]
Length = 858
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 151/672 (22%), Positives = 290/672 (43%), Gaps = 81/672 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAEN 126
+K+ +C+RT ++ + + EL+ P +K + I L+SR+N C+N V ++
Sbjct: 191 IKIFFCSRTHSQLSQFIGELRK---------SPYSKNVSVITLTSRQNYCINKNVKKLKH 241
Query: 127 RDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+ ++ C RK+T + +C F + L + ++++
Sbjct: 242 LNLINECCLQLQRKKTTAKDEKDLKRKKMTSSCPFVPGNQDLLIRESLMQ-IRDIEEIVQ 300
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G+ C Y+ +R V + +++ Y +L K I S K ++++ DEAHN+
Sbjct: 301 KGENLKTCAYYASRKAVSYGQLILVPYNTILH-KNTRISSGINLKGNILIIDEAHNL--- 356
Query: 243 CIEALSVSVRRQTLEGATRNL----SRINQEIERFKATDAGRLRAEYNRL---------V 289
+EA+ ++ + G RNL S+++Q RF+ + + +L V
Sbjct: 357 -LEAIE-NMHSVIITG--RNLLHCYSQLSQYQNRFQTLFSAKNILSLTQLSFCLRKLITV 412
Query: 290 EGLALRGNLPNAWLSNPALPS--DILKEAVPGNIRRAEHF--LHVLR--RLVQYLRG--- 340
G ++ N P+ ++ A P I + A+ NI F L ++ RL L+G
Sbjct: 413 LGATIKSN-PDDVINIEASPKLYKIEEFAIMTNIDTVNMFELLKFIKNSRLNHKLQGFIE 471
Query: 341 ------RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLH 394
++ N + G F+ SI KT ++ + + L + ++
Sbjct: 472 QYDTNLKIHNHNTKTCGVKQFLNSI--------KTKSTEFDTITDIQLDEDRSNNP---- 519
Query: 395 IQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVI 454
+ TI F + + I I P P + +++ + + + ++V++
Sbjct: 520 MMTIISFLECLRSNCSDGRIFIIP----GPTVGQSIIKFLLLNPAAHFHDIIRDARAVIL 575
Query: 455 TSGTLSPIDLYPRLL------NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDM 508
GT++P++ + L + +V+ S + + I + T G + F
Sbjct: 576 AGGTMAPMNEFTDQLFIAAGASSERIVTYSCDHVIPEENIVCSITTHGPTGIEFEFNFQN 635
Query: 509 RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE 568
R + + G+ L+ + +I+P GI+ F SY++ + I +SGI+K++ K + E
Sbjct: 636 RENTKLLDELGRALLNLCNIIPAGIIVFLPSYNFEELIYKHLENSGIVKKLSLKKHILRE 695
Query: 569 TQDVVETTLALDNY----RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
+ + L Y + + G++ FSV GK++EG++F GR VI+ G+P+
Sbjct: 696 PKSASQVHEILKEYSLHVKNPKNSQNGSLLFSVVGGKLSEGLNFSDDLGRCVIVVGMPYP 755
Query: 625 YTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
S L +++YL + + G +F ++ QC+GR IR DY +I DKRYS
Sbjct: 756 NIQSLELQEKMKYLNENIKSDAGQNFYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYS 815
Query: 684 RHDKRSKLPGWI 695
K LP WI
Sbjct: 816 Y--KIKALPQWI 825
>gi|126340221|ref|XP_001373024.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Monodelphis domestica]
Length = 902
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 19/304 (6%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICP 490
+ S+ V ++V+I GT+ P+ D +LL VV S + D I P
Sbjct: 602 NPSVHFAQVVKECRAVIIAGGTMQPVADFREQLLECAGVGTERVVEFSCGHVIPPDNILP 661
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
+VL G P+ + R P + G++L + ++VP G+VCFF SY Y+ ++ A W
Sbjct: 662 IVLCSGPSNQPLEFIYQKRDLPQLMDEIGRILCNLCNVVPGGVVCFFPSYDYLHKVQAHW 721
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA---CDCGR----GAVFFSVARGKVA 603
SG+L + K +F E + L Y K C R GA+ SV GK++
Sbjct: 722 AQSGLLTRLTVKKKIFQEPSRANQVEQVLTEYSKCIKRCSQVRGVMTGALLLSVVGGKMS 781
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD-ALRQAAQCV 662
EGI+F GR V+M G+P+ S L ++ YL T G L + ++ Q +
Sbjct: 782 EGINFSDDLGRCVVMVGMPYPNIKSLELQEKMAYLDQTRPNSPGKSLIENLCMKAVNQSI 841
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRK 721
GR IR + D+ ++ D+RYSR +KLPGWI RD + + A R+F R+
Sbjct: 842 GRAIRHRQDFASILLLDQRYSRPYILAKLPGWI----RDQVSIKATFGPAFAALRKFHRE 897
Query: 722 MAQP 725
+ P
Sbjct: 898 KSDP 901
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V +
Sbjct: 225 TKIYYCSRTHSQL------TQFVHEVQKSPFGKETRLISLG--SRQNLCVNEEVKRLGSV 276
Query: 128 DSVDAAC---------RKRTASWVRALAAENPNIETCEFFENYEKAA--SAAVLPPGVYT 176
++ C +K+ +A + N +C F+ NYE+ VL V
Sbjct: 277 HLINDRCLEMQKNKHGKKKNKEEEKAKKRKLENRMSCPFY-NYEQMQFLRDEVLME-VKD 334
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++ L GK+ CPY+ +R + A +VV YQ LL ++Q + VV+ DEA
Sbjct: 335 IEQLVVLGKEARACPYYGSRFAIPSAQLVVLPYQMLLHAATRQAAGIKLQGQ-VVIIDEA 393
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
HN+ + S V L A S+++Q +ER++
Sbjct: 394 HNLIDTITSIHSAEVSGLQLCQAH---SQLSQYMERYR 428
>gi|390352857|ref|XP_001196422.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 138/257 (53%), Gaps = 7/257 (2%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P++ + L+ + + + + V+T+G D +++ + R
Sbjct: 10 RSIILTSGTLAPLNSFKSELSIDFPIQLENPHVIDKHQMVVGVMTKGPDGTVLNSSYQTR 69
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ G +V +VP+G++ FF SY M+ I W +SG+ I Q+K +FIE
Sbjct: 70 FKKEYVLSLGNAIVNFARMVPNGLLVFFPSYPVMNHAIEIWQESGVSNRITQYKEMFIEP 129
Query: 570 QDVVETTLALDN-YRKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + A+++ Y + D GA FF+V RGKV+EG+DF + GR V++ G+PF
Sbjct: 130 RGKRDFKEAMESFYERVRDPTLNGAAFFAVCRGKVSEGLDFADNNGRAVVITGLPFPPRK 189
Query: 628 SKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
++ +++YL R+ + + A R Q +GRVIR + D+G ++ D R+
Sbjct: 190 DPRVMLKMQYLDEAKRRNPQGLSGQMWYRQQASRAVNQAIGRVIRHRQDFGAILLCDTRF 249
Query: 683 SRHDKRSKLPGWILSHL 699
+ + R++LP W+ HL
Sbjct: 250 TNSEARAQLPSWVRPHL 266
>gi|345317478|ref|XP_001517598.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Ornithorhynchus anatinus]
Length = 899
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 128/264 (48%), Gaps = 18/264 (6%)
Query: 450 QSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
++V+I GT+ P+ D +LL VV + + D I P+VL G P+
Sbjct: 614 RAVIIAGGTMQPVADFREQLLACAGVGAERVVEFACGHVIPPDNILPLVLCSGPSNQPLE 673
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
+ R P + G++L + ++VP G+VCFF SY Y ++ A W SG+L + K
Sbjct: 674 FTYQKRELPQMMDETGRILFNLCNVVPGGVVCFFPSYEYQRQVQARWEHSGLLARLGIKK 733
Query: 564 LVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRHYGRLV 616
VF E + + L +Y K C + GA+ SV GK++EGI+F GR V
Sbjct: 734 KVFQEPKKASQVEKVLADYSKCIQHCSQPGSAMTGALLLSVVGGKMSEGINFSDDLGRCV 793
Query: 617 IMFGVPFQYTLSKILLARLEYLRDTFQIKEGD-----FLTFDALRQAAQCVGRVIRSKAD 671
+M G+P+ S L ++ YL T G + +R Q +GR IR + D
Sbjct: 794 VMVGMPYPNIKSPELQEKMAYLDQTLPRGPGQAPGKALIENTCMRAVNQSIGRAIRHQHD 853
Query: 672 YGMMIFADKRYSRHDKRSKLPGWI 695
+ ++ D+RY+R +K+PGWI
Sbjct: 854 FASIVLLDQRYARPAILAKMPGWI 877
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 45/241 (18%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G ++ ++G SR++LCVN V +
Sbjct: 213 TKIYYCSRTHSQL------AQFVHEVQRSPFGKETRLASLG--SRQSLCVNEDVRRLGSM 264
Query: 128 DSVDAACRKRTASWVRALAAENPNIE----------------------TCEFFENYEKAA 165
++ C + + A +NP E TC F+ +YE+
Sbjct: 265 QLINDRCMELQRN---KQARKNPEEEEKEEQAEETGKARKKRKRESRATCPFY-SYEQMQ 320
Query: 166 --SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISK 223
VL V ++ L A G++ CPY+ +R+ + A +VV YQ LL
Sbjct: 321 LLRDKVLVE-VKDIEQLVALGQESHACPYYGSRYAIPAAQLVVLPYQMLLHSATRRAAGI 379
Query: 224 EMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRA 283
++Q + VV+ DEAHN+ + S V L + S++ Q +ER++ RL+A
Sbjct: 380 QLQ-DQVVIIDEAHNLIDTITAIHSAEVNGAQL---CQAYSQLLQYLERYRK----RLKA 431
Query: 284 E 284
+
Sbjct: 432 K 432
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 6 EDVTVYFPYD-NIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
E V+FP+ YP Q S+M EL R L+A + E PTGTGK+++L+ S++
Sbjct: 7 EPGRVHFPFPFTPYPIQESFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWL 62
>gi|344233991|gb|EGV65861.1| hypothetical protein CANTEDRAFT_101726 [Candida tenuis ATCC 10573]
Length = 807
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 20/282 (7%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM----V 492
D S KP+ + + +++ GT+ P+ Y L P + + + D I P+ V
Sbjct: 505 DPSEIFKPIVEDCKCLILAGGTMEPMSDYTEYL--FPYLPTTQIKQFSCDHIIPIENLKV 562
Query: 493 LTRGS--DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
L GS +Q+ + F R++ + G+ L+E++ PDG V F SY Y++ I+A W
Sbjct: 563 LPIGSYKNQI-LDFSFKNRNNSTLILRLGECLIEIMKNTPDGTVVFLPSYKYLNHIVAEW 621
Query: 551 NDSGILKEIMQHKL-VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFD 609
GI K++ K +F+E + L Y +A G+GAV FSV GK++EGI+F
Sbjct: 622 KQMGIWKQMEALKSSLFVEPSSSSQVDEVLKKYSRAIKTGKGAVLFSVVGGKLSEGINFS 681
Query: 610 RHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG----------DFLTFDALRQAA 659
R VIM G+P+ +S L+AR +++ +T +K G F+ +R
Sbjct: 682 DELARAVIMVGLPYPNLMSGELIARKKFIEETTFLKTGSKSMALDNSRQFIENICMRSIN 741
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
Q +GR IR DY M+ D RY + ++KL GWI + D
Sbjct: 742 QSIGRSIRHINDYSMIYLFDHRYHQKSVQNKLSGWIKRRILD 783
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
++ K+ + +RT ++ + +L L +++ + ++ + + SRK LC++ ++
Sbjct: 180 DDSTKIFFSSRTHTQLGQFSGQLALT-TFESSLYDMSERVKYLPMGSRKQLCIHPKISKL 238
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETC-EFFENYEKAASAAVLPPGVYTLQDLRAF 183
N +S++ AC + + N +E + F +Y ++ +Q+L+
Sbjct: 239 SNTESINEACGELAKKESKCEFVCNTKVEGIKQQFNDYSLTK--------IHDIQELKQL 290
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G+ CPY+ R+ ++ V+ YQ LL+ ++ ++ ++V DEAHN+ +
Sbjct: 291 GEYLKICPYYSVRNNLKMTEVISLPYQMLLEENARDSLNINIKNSIIIV-DEAHNLLDTI 349
Query: 244 IEALSVSVRRQTLEGATRNL 263
S ++ + L ++L
Sbjct: 350 NALNSAAISAEELTSLNQSL 369
>gi|403309188|ref|XP_003945007.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Saimiri boliviensis boliviensis]
Length = 903
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL---NFHP--VVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL P VV S + D I P+V+ G
Sbjct: 606 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEPERVVEFSCGHVIPPDNILPLVICSGIS 665
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + +VP G+VCFF SY Y+ ++ W G+L
Sbjct: 666 NQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEYLRQVHTHWEKGGLLDR 725
Query: 559 IMQHKLVFIE---TQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRH 611
+ K +F E T V + LA + C R GA+ SV GK++EGI+F +
Sbjct: 726 LAARKKIFQEPKSTHQVEQVLLAYSRCIQGCGQERGRVTGALLLSVVGGKMSEGINFSDN 785
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRV 665
GR V+M G+PF S L ++ YL T G AL + Q +GR
Sbjct: 786 LGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRA 845
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 846 IRHQRDFASIVLLDQRYARPPVLAKLPAWI 875
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR++LCVN V + +
Sbjct: 227 TKVYYCSRTHSQL------AQFVHEVKKSPFGKDVRLVSLG--SRQSLCVNEDVKSLGSV 278
Query: 128 DSVDAAC---------RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C +K+ A + C F+ + + V ++
Sbjct: 279 QLINDRCVDMQRSRHGKKKGAEEEKPKRRRQEKQAACPFYNHEQMDLLRDEALAEVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKEMQKESVVVFDE 235
L A GK+ CPY+ +R + A +VV YQ LL K AGI ++ VV+ DE
Sbjct: 339 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRKAAGI----RLQDQVVIIDE 394
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
AHN+ + SV V L A S++ Q +ER++ RL+A+
Sbjct: 395 AHNLIDTITGMHSVEVSGSQLCQAH---SQLLQYMERYRK----RLKAK 436
>gi|449328753|gb|AGE95029.1| ATP dependent DNA binding helicase [Encephalitozoon cuniculi]
Length = 619
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 155/696 (22%), Positives = 291/696 (41%), Gaps = 149/696 (21%)
Query: 17 IYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK-----PENP---- 67
+Y Q + + +R +D + PTGTGKT++LLS + Y+ + P N
Sbjct: 6 LYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDYIGADEAGLDPRNRALEQ 65
Query: 68 -------VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+K++YCTRT ++ + + ELK L A ++ L SR+ C+N R
Sbjct: 66 ALFQGGRMKVLYCTRTHTQLTQAINELKKLE----------AGCNSVVLGSRRIYCLNER 115
Query: 121 VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
V + D+V+ C++ + + C+ F+ + GV ++DL
Sbjct: 116 VCQNRSSDAVNEGCKEAVKEGLCVF------YDGCDLFDGH-----------GVLDVEDL 158
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
A G+ + CPY++++ Q ++V YQ L + + ++ +ES+VV DEAHNI
Sbjct: 159 VAMGRNERLCPYYVSKRYSQQCDIVFLPYQLLFTREGRKSMGIDV-RESIVVVDEAHNIY 217
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
+ ++ + + T ++R + ++ ++ R++ E G L
Sbjct: 218 DSVVQMNTACILFST-------MNRCIKAMQLYRERHGRRMKRE-----------GQL-- 257
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT 360
E + +LRR+ + G +V + V V+
Sbjct: 258 ------------------------ETVVEILRRIKGF--GDEYCGDVGEGEGVMGVSEFL 291
Query: 361 AHAGI---------DQKTLRFCYERLHSLML--TLEITDTDEFLHIQTICDFATLVGTYT 409
AGI D + RL +L+I + +FL + T+ D + + +
Sbjct: 292 LKAGIEDFNMLEVEDYIVTSGIFRRLEGFGSNPSLQIPEISKFLGLLTVSDRSGRIFYSS 351
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL 469
RG ++ + DAS+ + V + +++++ GT+ P+D +L
Sbjct: 352 RG-------------------VRFTPLDASMYFEDVLE-CRALLLAGGTMEPVDQLMSVL 391
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
R F + +V+ G + F+ R P ++ + + + V
Sbjct: 392 GKKS--PRYFSYGSICNDFLALVMGSGPSGREIIVNFETRERPESIKDVTSSISNLSNAV 449
Query: 530 PD-GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV-ETTLALDNYRKACD 587
D G+VCF S +Y+ GIL+E + T+ + E + + Y A +
Sbjct: 450 KDGGMVCFLPSKAYL----------GILRERCGD---MVGTKKALYEDLITFEGY--AEE 494
Query: 588 CGRG-AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE 646
GRG + F+V G+++EG++F RL+++ GVP+ LE L++ +
Sbjct: 495 AGRGPCILFAVMGGRLSEGVNFGDGLCRLLVVVGVPYP-------TQDLE-LKERAKFNG 546
Query: 647 GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
G++ T A+R Q +GR +R + DY +++ DKRY
Sbjct: 547 GEYATSIAMRTVNQTLGRALRHRNDYAVLVLLDKRY 582
>gi|395538820|ref|XP_003771372.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Sarcophilus harrisii]
Length = 901
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 143/304 (47%), Gaps = 19/304 (6%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICP 490
+ S+ V ++++I GT+ P+ D +LL VV S + D I P
Sbjct: 601 NPSVHFAQVVKECRAMIIAGGTMQPVADFREQLLECAGVGTERVVEFSCGHVIPPDNILP 660
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
+VL G + + R P + G++L + ++VP G+VCFF SY Y+ +I A W
Sbjct: 661 IVLCSGPSNQQLEFIYQKRELPQMMDEVGRILCNLCNVVPGGLVCFFSSYDYLHKIHAHW 720
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVA 603
SG+L + K +F E + L Y K C + GA+ SV GK++
Sbjct: 721 KQSGLLTRLAVKKKIFQEPNRANQVEQVLTEYSKCIKRCSQVKGVMTGALLLSVVGGKMS 780
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD-ALRQAAQCV 662
EGI+F GR V+M G+P+ S L ++ YL T G L + ++ Q +
Sbjct: 781 EGINFSDDLGRCVVMVGMPYPNIKSLELQEKMAYLDQTLPNNPGKSLMENLCMKAVNQSI 840
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRK 721
GR IR + D+ ++ D+RYSR +KLPGWI RD + + A R+F R+
Sbjct: 841 GRAIRHRQDFASILLLDQRYSRPSILAKLPGWI----RDQVEIKTAFGPAFATLRKFHRE 896
Query: 722 MAQP 725
+ P
Sbjct: 897 KSDP 900
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + + E+ Q G +++++G SR+NLCVN V +
Sbjct: 225 TKIYYCSRTHSQLTQFVREV------QKSPFGKETRLVSLG--SRQNLCVNEEVKRLGSA 276
Query: 128 DSVDAAC--------RKRTASWVRALAAENPNIETCEFFENYEKAA--SAAVLPPGVYTL 177
++ C K+ +A + +C F+ NYE+ VL V +
Sbjct: 277 TLINDRCLEMQKSKHEKKNKEDEKAKKRKTETHTSCPFY-NYEQMQFLRDEVLME-VKDI 334
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+ L GK+ CPY+ +R + A +VV YQ LL ++Q + VV+ DEAH
Sbjct: 335 EQLVVLGKETHACPYYGSRFAIPSAQLVVLPYQMLLHAATRHAAGIKLQGQ-VVIIDEAH 393
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
N+ + S V L A S+++Q +ER++
Sbjct: 394 NLIDSITSIHSAEVNGSQLCQAH---SQLSQYMERYR 427
>gi|301777952|ref|XP_002924394.1| PREDICTED: Fanconi anemia group J protein-like [Ailuropoda
melanoleuca]
gi|281342514|gb|EFB18098.1| hypothetical protein PANDA_013720 [Ailuropoda melanoleuca]
Length = 1249
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 169/698 (24%), Positives = 283/698 (40%), Gaps = 100/698 (14%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + EL+ +T + G IL SSR + CV+ V+ NR+
Sbjct: 245 KIYFGTRTHKQIAQITRELR-----RTAYSGVPMTIL----SSRDHTCVHPEVVGNFNRN 295
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-----GVYTLQDLRAF 183
C + + N ++C F+ K + L + +++L +
Sbjct: 296 E---KCME---------LLDGKNGKSCYFYHGVHKISDQHTLQTLQGMCKAWDIEELVSL 343
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
GK+ CPY+ AR +++ A+++ Y YLLD ++ + + KE +V+ DEAHNI++
Sbjct: 344 GKKLKACPYYTARELIEDAHIIFCPYNYLLDAQIRESMDINL-KEQIVILDEAHNIEDCA 402
Query: 244 IEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGR---------LRAEYNRLVE--- 290
E+ S SV L A L S +N I R K + R L A LVE
Sbjct: 403 RESASYSVTEVQLRFARDELDSMVNNNI-RKKDHEPLRAVCYSLINWLEANSEHLVERDY 461
Query: 291 --------GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL--RG 340
G + NL ++ P IL+ HF VL++ + L G
Sbjct: 462 ESSCKIWSGSEMLLNLHKMGITTATFP--ILQG----------HFSAVLQKEEKVLPIHG 509
Query: 341 RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
+ E+ V I+A I K L ++ L D D + IQ
Sbjct: 510 KEESR---------IVPIISASTQIMLKGLFMVFDYL--FRQNSRFAD-DYKVAIQQTYS 557
Query: 401 FATLVGTYTR-GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTL 459
+ + T + GF + + VL C + ++A + + ++V+TSGTL
Sbjct: 558 WINQIDTSDKNGFFALAKNKKRSRQKTAVHVLNFWCLNPAVAFSDISGKVWTIVLTSGTL 617
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
SP+ + L + + + + G + F G
Sbjct: 618 SPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVG 677
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ--------D 571
+LL+ + V GI+CF SY ++++ W D+G+ + K V +E Q +
Sbjct: 678 ELLLSVCQTVSQGILCFLPSYKLLEKLKERWLDTGLWDNLELVKTVIVEPQGGEKTDFDE 737
Query: 572 VVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QY 625
+++ Y+ D GA+ +V RGKV+EG+DF R VI G+PF Q
Sbjct: 738 LLQVYYDAIKYKGEKD---GALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQV 794
Query: 626 TLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
L + + LR ++ + A R Q +GR IR K D+G +I D R+ +
Sbjct: 795 ELKRQYNDQHSKLRGLLPGRQ--WYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSN 852
Query: 686 DKR--SKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
R S L W+ ++ + + + AL EF +K
Sbjct: 853 PSRYISGLSKWVRQQIQH---HSTFESALESLTEFSKK 887
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+ + V + FPY YP Q + M + R L++K HCLLE PTG+GK++ALL ++ S
Sbjct: 8 YTIGGVKITFPY-KAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQS 66
Query: 63 KPENPV 68
PV
Sbjct: 67 LSGKPV 72
>gi|57640719|ref|YP_183197.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus
kodakarensis KOD1]
gi|57159043|dbj|BAD84973.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus
kodakarensis KOD1]
Length = 637
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 172/725 (23%), Positives = 299/725 (41%), Gaps = 116/725 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY+N+ P Q ++ + A+ + ++E PTG GKTI++L+ + + E K+
Sbjct: 4 YFPYENLRPNQREFIELIGEAVKNGENAIVEAPTGFGKTISVLAGVLPFA---KEYGYKV 60
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + ELK +H + + + L SRK LC+++ L D+
Sbjct: 61 LYLARTHRQMDRVIEELKAIHRKKP--------VSGVELRSRKELCLHT-YLKQFTTDAY 111
Query: 131 DA--ACRK-----RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
+A C+ + + + E FF E + A +L +
Sbjct: 112 NAMVVCKNLKKLGKCPFYENEKKKKAEFEEVIRFFLT-EPSHPAEIL-----------NY 159
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNID 240
+ CPY L + + + A+V+V SY Y L P + + + + +V+FDEAHN+
Sbjct: 160 AETLELCPYDLTKRIAEKADVIVASYLYALSPSIRESLISSLGVDYSDLIVIFDEAHNLP 219
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEYNRLVEGLALRGNLP 299
+ I ALS + T+ A + + EI F + L Y+ E LA R ++
Sbjct: 220 DQAISALSDRLSIHTINRAIKEADEYREHEIANFLSILGKGLEKLYS---EKLAER-DVE 275
Query: 300 NAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEK-EGPVSFVAS 358
A P P + + + L +V + + + +EK + P S+V
Sbjct: 276 EA----PVQPELVFTHVIEILGINERWLVKTLNEMVS-VGDAIREDRIEKGKPPRSYVGR 330
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP 418
+ L+L L + D++L + T +G S
Sbjct: 331 VGEF-----------------LLLWLSLIGRDDYLFLM----------TREKGMS----- 358
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS 478
L+L D S A+ + D QS + SGTL+P++ + ++ +
Sbjct: 359 ------------LELVALDPSRALSFIKD-VQSAIFMSGTLTPLEAFRDVMGIENARMKK 405
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKL---LVEMVSIVPDGIVC 535
F P ++ R + Q+ V+ R D + Y K+ +VE V ++P +
Sbjct: 406 F----------PRMVKRENAQVLVAKDVSTRGDERSLQAYRKMVDYIVEAVKLIPKNVGV 455
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACDCGRGAV 593
F SY + +++ D +K + VFIE Q V E L + + KA G GAV
Sbjct: 456 FTASYEVLQGLLSANLD---VKLEETGRAVFIEQQGVSSRENDLMIAQF-KAHAKGNGAV 511
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF- 652
V G+ +EG D+ V++ G+P+ ++ A++ Y F K G + +
Sbjct: 512 LLGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPTPRV-QAQIRYFEKKFPGK-GRYYGYY 569
Query: 653 -DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
A R+ Q GRV RS + G ++ D R R LP W+ ++ L M
Sbjct: 570 LPAHRKLVQAAGRVHRSAEEKGSIVILDYRVLWRSIRKDLPDWMKETMKPVTL---PTMR 626
Query: 712 LHIAR 716
L++ R
Sbjct: 627 LYLKR 631
>gi|195396523|ref|XP_002056881.1| GJ16649 [Drosophila virilis]
gi|229891629|sp|B4M891.1|RTEL1_DROVI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194146648|gb|EDW62367.1| GJ16649 [Drosophila virilis]
Length = 1005
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 156/312 (50%), Gaps = 16/312 (5%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
++ C + ++ + + +SV++TSGTL+P L P + V++ + + R
Sbjct: 453 IINFWCFNPGFGMEQLLNAHVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDRS 510
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + + R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 511 QVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQC 570
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GA F +V RGKV+EG+
Sbjct: 571 VDAWQASGLWADISCRKPIFLEPRGKDQFTSTMEEFYQAIRDSKGACFMAVCRGKVSEGL 630
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQ 660
DF GR VI+ G+PF ++ + YL +T + KE L+ DA R Q
Sbjct: 631 DFADRNGRAVIITGLPFPPLKDPKVVLKRRYL-ETNRTKENQLLSGQEWYNLDATRAVNQ 689
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
+GRVIR + DYG ++ D R+ + +L WI HL + + R+F +
Sbjct: 690 AIGRVIRHRNDYGAILLCDARFQDMSQVQQLSKWIRGHLGARPQSSPFGPIVRELRQFFK 749
Query: 721 ----KMAQPYDK 728
MAQP ++
Sbjct: 750 HAEQTMAQPEER 761
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 62/311 (19%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE-- 65
+ V+FP++ Y Q +YM ++ L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEQ 67
Query: 66 --------------------------NPV----------KLIYCTRTVHEMEKTLAELKL 89
N V K+IY +RT ++ + + ELK
Sbjct: 68 QQYMQKLQLDQQKQATGGAGAGVADLNAVMGKANNWGVPKVIYASRTHSQLSQAMRELK- 126
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
+T + A + ++ L SR LC++ V+ + + C+ +
Sbjct: 127 ----RTAY----ANMKSVVLGSRDQLCIHPDVMREQGNSNKVNMCKLKV----------- 167
Query: 150 PNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
+ +TC F E K P + ++DL G++ CPYF ++ +V A++
Sbjct: 168 -HAKTCSFQLRVESKKDHPDFRGPSIMDIEDLVKVGQRLKMCPYFASKELVNGADITFMP 226
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y YLLDPK E+ ++V+ DEAHNI+ +C E+ SV +R + A +++ I +
Sbjct: 227 YNYLLDPKARKANKIEL-SNTIVILDEAHNIEKICEESASVQIRSSDVAMAIEDITHIMK 285
Query: 269 EIERFKATDAG 279
A D G
Sbjct: 286 IFTSGDAQDTG 296
>gi|389637597|ref|XP_003716432.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642251|gb|EHA50113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
Length = 921
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 170/730 (23%), Positives = 286/730 (39%), Gaps = 142/730 (19%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILA------------IGLSSR 112
E VK+ Y +RT ++ + ++EL+ N+ + G L+ + LSSR
Sbjct: 199 EENVKIFYTSRTHSQLTQFISELRR-PNFPSSFPGADEPSLSKTETGTRECVKHVPLSSR 257
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCE-FFENYE-KAASAAVL 170
+ LC+N V + +++ C + S ++ P + + + E ++ + AS A +
Sbjct: 258 QKLCINPAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPSQDNLSETHQFRDASLATI 317
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
P ++D GK CPY+ R + A +V Y LL + E+Q SV
Sbjct: 318 P----DIEDAHKLGKSLQVCPYYATRTAIPGAEIVTLPYPLLLQKSARDALGIELQG-SV 372
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVE 290
VV DEAHNI + S +R LE R ++ +RF +L+AE +V
Sbjct: 373 VVVDEAHNIMDAIAGVHSAEIR---LEDLRRGREMLSIYAKRF----GKKLKAENRIMVG 425
Query: 291 GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV-------LRRLVQYLRGRLE 343
+A + WL L+++V I L + L+ Y++ E
Sbjct: 426 QVARVIQGLSEWLER------ALEQSVEHGIIDPRVLLKTKGMDQIDMFALISYIQ---E 476
Query: 344 TENVEK-EGPVSFVASITAHAGIDQKTLRFC--YERLHSLMLTLEITDTDEFLHIQTICD 400
++ K E + V + + +KT+R L S +L L T+ + + +
Sbjct: 477 SKLAYKIESYAAHVDELEEASKGQKKTIRTSPVLHNLSSFLLALTNLSTEGRIFFEKV-- 534
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
+V ++ + I + + LS + A + ++V++ GT+S
Sbjct: 535 ---VVDGGSKQYDIKLS------------YMLLS---PTYAFSSIATSARAVILAGGTMS 576
Query: 461 PIDLYP-RLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTK------FDMRS 510
P Y L HP + S + +C L P F R
Sbjct: 577 PFQDYETHLFPSHPQHKITKLSCGHVIPSSNLCVWTLASMRPATPAGNSDLFEFSFQKRR 636
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA----------TWNDSGILKEIM 560
D + + G ++ + S VPDG+V FF SY Y+DE++A T +S I ++
Sbjct: 637 DKTMIQQLGTAILNICSAVPDGVVVFFPSYGYLDEVVAALQQKLAATGTAPNSSIWDKLQ 696
Query: 561 QHKLVFIETQDVVETTLALDNYRKA------------CDCGRGAVFFSVARGKVAEGIDF 608
K VF ET+ + L++Y A GA+ SV GK++EGI+F
Sbjct: 697 SRKAVFRETKG-GSSDQVLEDYSNAILGEKDAEGKQRSPSQNGALLLSVVGGKMSEGINF 755
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT-----FQIKEG---------------- 647
GR V++ G+P+ S AR+EY+ + + G
Sbjct: 756 SDRLGRCVVIVGLPYPNVASPEWKARMEYIDSSTVAGLLDKQNGTTAGDVSARESTPSAT 815
Query: 648 ----------------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
DF +R Q +GR IR + DY ++ D+R+
Sbjct: 816 VTKPPSTITREQAAAAGKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIVLLDRRFGTE 875
Query: 686 DKRSKLPGWI 695
R+KLPGWI
Sbjct: 876 RIRAKLPGWI 885
>gi|348533666|ref|XP_003454326.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oreochromis niloticus]
Length = 1193
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 146/295 (49%), Gaps = 13/295 (4%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
+L C +++ + ++ + +++TSGTLSP+ + + V + RD I
Sbjct: 450 ILSYWCFSPGFSMQDLVNQGVRCIILTSGTLSPLSSFTSEMRIEFPVRLENSHVIERDQI 509
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ +G D +S+ FD R P + G + + +VP G++ FF S+ M++ +
Sbjct: 510 FVSIIAQGPDGAHLSSAFDRRFVPENMASLGNTVANLSRVVPHGLLVFFPSFPLMEKTLE 569
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGI 606
W +G I K +F+E + +D Y + +G FF+V RGK +EG+
Sbjct: 570 FWKANGHANRIENIKPMFVEPKGKGTFNDVIDGYYSKVNDPASKGGSFFAVCRGKASEGL 629
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE--------GDFLTFDALRQA 658
DF YGR VI+ G+PF ++ ++++L + + K D+ A R
Sbjct: 630 DFADTYGRGVIITGLPFPPKNDPRVILKMQFLDEMNRKKAPGLKYLSGQDWYKQQAFRAV 689
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR--DAHLNLSTDMA 711
Q +GRVIR K DYG + D+R+ D R++LP W+ S++R D+ N+ D++
Sbjct: 690 NQAIGRVIRHKEDYGAIFLCDQRFKSADARAQLPSWVRSYVRLCDSFGNVVRDVS 744
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 139/300 (46%), Gaps = 62/300 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV---- 60
L VTV FP+ + Y Q +YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LSGVTVNFPF-SPYECQKAYMNKVIECLQKKVNGVLESPTGTGKTLCLLCATLAWRENFK 64
Query: 61 -----------LSK---PENPV--------------------KLIYCTRTVHEMEKTLAE 86
L K P P+ K++Y +RT ++ + ++E
Sbjct: 65 GTISARKIAERLGKEMFPNTPLSSWGTAATDGDKPTYYTDVPKIVYASRTHSQLAQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
LK N R K+ +G SR+ LC+N V+ E+ CR + ++
Sbjct: 125 LK---NTSYR-----PKVCVLG--SREQLCINQEVMRQESNHVKVHMCRGKVST------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C ++ N E+ ++ L + ++DL FG +Q CPY+L+R + Q A+V+
Sbjct: 169 ------RSCVYYNNVEEKSTDRDLVNSILDVEDLVQFGTKQRVCPYYLSRSLKQQADVIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLDPK + ++ +VV+FDEAHN++ C E+ S + + A + R+
Sbjct: 223 MPYNYLLDPKSRKAHNIDLNG-AVVIFDEAHNVEKTCEESTSFDLTPYDVASAINAVDRL 281
>gi|410898938|ref|XP_003962954.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Takifugu rubripes]
Length = 1074
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
+L C +++ + ++ + +++TSGTLSP+ + + VS + RD I
Sbjct: 442 ILSYWCFSPGFSMQDLVNQGVRCIILTSGTLSPLSSFTSEMRIEFPVSLENSHVIDRDQI 501
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ RG D + +S+ FD R P + G + + +VP G++ FF S+ M++++
Sbjct: 502 FVSVVDRGPDGVQLSSAFDKRFVPENMASLGNTVANLTRVVPHGLLVFFSSFPLMEKMLE 561
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGI 606
W +G + I K +F+E + T +D Y + +G FF+V RGK +EG+
Sbjct: 562 FWRANGQAERIDSLKPIFVEPKGKANFTEVIDGYYNKVNDPQTKGGSFFAVCRGKASEGL 621
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF---------DALRQ 657
DF +GR VI+ G+PF + ++ ++++L D + L F A R
Sbjct: 622 DFADTFGRAVIITGLPFPPKMDPRVILKMQFL-DEMSSNKTSKLKFLSGQQWYKQQAFRA 680
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q +GRVIR + D+G ++ D R+ D R++LP W+
Sbjct: 681 VNQAIGRVIRHRHDFGAILLCDHRFKNPDARAQLPLWV 718
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 61/281 (21%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSL--------- 55
L VTV FP+ Y Q YM ++ L + + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVNFPF-TPYDCQKDYMTKVIECLQKRNNGVLESPTGTGKTLCLLCATLAWREQLK 64
Query: 56 ---------------------ITSY--VLSKPENPV-----KLIYCTRTVHEMEKTLAEL 87
ITS+ V + E K+IY +RT ++ + + EL
Sbjct: 65 DQISRKMIERRLGGETSQNIPITSWGSVAADGEATCYTDIPKIIYASRTHSQLAQVIKEL 124
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
K N R KI +G SR+ LC+N V+ E+ CR++ ++
Sbjct: 125 K---NTSYR-----PKISVLG--SREQLCINQEVMRQESSHVKVHMCRRKVST------- 167
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+C F+ N E+ ++ L + ++DL FG ++ CPY+L+R + Q A+++
Sbjct: 168 -----RSCPFYNNTEEISTDRELTHSILDVEDLVKFGNKKRVCPYYLSRSLKQEADIIFM 222
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
Y YL+DPK + E+ +VV+FDEAHN++ C E+ S
Sbjct: 223 PYNYLVDPKSRRAHNIELNG-AVVIFDEAHNLEKTCEESTS 262
>gi|195470104|ref|XP_002099973.1| GE16425 [Drosophila yakuba]
gi|229891631|sp|B4PZB4.1|RTEL1_DROYA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194187497|gb|EDX01081.1| GE16425 [Drosophila yakuba]
Length = 985
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 145/280 (51%), Gaps = 10/280 (3%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
++ C + ++ + + + +SV++TSGTL+P L P + V++ + + +
Sbjct: 453 IINFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQS 510
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + + R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 511 QVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKC 570
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GAVF +V RGKV+EG+
Sbjct: 571 VDAWQASGLWADISVKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGL 630
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQC 661
DF GR VI+ G+PF ++ + YL R+ + ++ DA R Q
Sbjct: 631 DFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQA 690
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
+GRVIR + DYG ++ D R+ + +L WI HL D
Sbjct: 691 IGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGD 730
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 63/312 (20%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENP 67
+ V+FP++ YP Q +YM ++ + L + +LE PTGTGKT++LL +++ ++
Sbjct: 9 IPVHFPFEP-YPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEH 67
Query: 68 V---------------------------------------KLIYCTRTVHEMEKTLAELK 88
K+IY +RT ++ + + ELK
Sbjct: 68 QQQMVKMEKADFTGLGGGAAGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAMRELK 127
Query: 89 LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAE 148
+T + A + ++ L SR LC++ V+ + + C+ R S
Sbjct: 128 -----RTAY----ANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHS-------- 170
Query: 149 NPNIETCEFFENYEKAASAAVL-PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+TC F E L P + ++DL G++ CPYF +R +V A++
Sbjct: 171 ----KTCSFQMRVESRKDHPDLRGPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFM 226
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YLLDPK E+ ++V+ DEAHNI+ +C E+ SV ++ + A +++ I
Sbjct: 227 PYNYLLDPKARKANKIEL-GNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIM 285
Query: 268 QEIERFKATDAG 279
Q ++ D G
Sbjct: 286 QVFASGESQDMG 297
>gi|160330987|ref|XP_001712201.1| rad3 [Hemiselmis andersenii]
gi|159765648|gb|ABW97876.1| rad3 [Hemiselmis andersenii]
Length = 756
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 138/726 (19%), Positives = 306/726 (42%), Gaps = 60/726 (8%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F +E+V V FP++ I+PEQ M LK+ D K H ++ +P G G ++ + SY
Sbjct: 1 MKFFIENVYVLFPFNIIFPEQIQLMYILKKLFDNKSHGIMGIPPGIGFSMVTICFFISYN 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG---LS------- 110
S KLIYC R K + + L+ ++T +LG + + +I +S
Sbjct: 61 FSTKLKK-KLIYCLR------KEVDSISLIEQFRT-YLGESNEKFSIKNFEISPQITVPF 112
Query: 111 SRKNLCVNSRVLAAENRDSVDAACRKRTASWV-----RALAAENPNIETCEFFENYEKA- 164
+K LC+ R+ D ++ C+ A V + NI + + + +
Sbjct: 113 GKKTLCIEERLKPLTKIDEIEDFCKSLLAFSVYNEKKKEKIFSKLNINSDSYLNSQNQCF 172
Query: 165 -------ASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
+ ++TL+ LR FG ++ CPYF +R +V ++V++ + +
Sbjct: 173 FFQNFLKKKKKLDFRKIWTLKILREFGIRKKICPYFFSRDIVLKSDVIIGTLKKFFFSDF 232
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATD 277
+++ S ++F++ ++++++ + S+++ L+ + R++ + ++ K+
Sbjct: 233 FFSKNQKNVSLSYLIFEDIYDLESIQLIFSSINLNPIILKDSQRSIFWLKKKFFFHKSKF 292
Query: 278 AGRLRAE----YNRLVEGLALRG-------NLPNAWLSNPALPSDILKEAVPGNIRRAEH 326
+ +E Y+++ L N NP + +++ +I R H
Sbjct: 293 LKKFSSEDFFFYDQINTNLTENFFNIFSYRNFHQKNFFNPKFFT--IRKKKEKSIGRIFH 350
Query: 327 FLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHA---GIDQKTLRFCYERLHSLMLT 383
F +++++ + +L K F+ + + + +++F L+S +
Sbjct: 351 FFSLIQKITDFFSSKLNENTHLKLSIKEFLQYLLKNIYNLELTLNSIKFLNFFLNSFVTI 410
Query: 384 LEITDTDEFLHIQTICDFATLVG----TYTRGFSIIIEPFDERMPHIPDPVLQLSCHDAS 439
L + + + +F ++G ++ F I + P + +P + C + S
Sbjct: 411 LGYFGYRKINGLTKLIEFFRIIGENAESFNENFKIFFSSSNSDFPFLNEPKINFGCLETS 470
Query: 440 LAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
K + + F SV++ ++ +L+ P + + L + I P +L +
Sbjct: 471 FLTKSLLENFNSVMVCFPNGLQLNFIFFILDCKPQIFGNLGNFLEKKNINPFIL--NCED 528
Query: 500 LPVST--KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
LP+ K +A+ ++ + + +G +C F S ++++ + W LK
Sbjct: 529 LPMINLDKKKKEQQKNLAKKSFYIMNKFIDENLEGTICLFPSLNFINVFLEEWKTEKYLK 588
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
+ +F+E ++ + L ++NY+ CD G + F + G + I+F HY R ++
Sbjct: 589 NFIGKGEIFLENINLEDNYLLIENYKICCDLGLKTLLFGINGGTTTK-INFKSHYCRNLL 647
Query: 618 MFGVPF--QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMM 675
+ F ++ +I L ++ T Q ++ F L+ + SK D+G++
Sbjct: 648 IIDPMFFEKHQTFRIFLRNSKFFLKTKQFEDCK--KFYVLKNLGNILMDYFPSKKDFGVL 705
Query: 676 IFADKR 681
I ++
Sbjct: 706 ILINQE 711
>gi|242087259|ref|XP_002439462.1| hypothetical protein SORBIDRAFT_09g007185 [Sorghum bicolor]
gi|241944747|gb|EES17892.1| hypothetical protein SORBIDRAFT_09g007185 [Sorghum bicolor]
Length = 590
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 146/611 (23%), Positives = 255/611 (41%), Gaps = 95/611 (15%)
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+K + V G ++DL GK+ G CPY+ +R M++ A++VV YQ LL +
Sbjct: 8 QKEFRSEVSNQGALDIEDLARIGKKIGTCPYYGSRDMIRSADLVVLPYQSLLLKSARESL 67
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
+ K SVV+ DEAHN+ + + + L+ LS +++ + RF L
Sbjct: 68 GLNL-KNSVVIIDEAHNLADSLTNMYNSKITSSQLKTV---LSHLDEYLNRFHNV----L 119
Query: 282 RAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR 341
A R ++ L + L+ L I K+ N+ + Q+L
Sbjct: 120 GAANRRYIQTLTV--------LTRSFLRVLINKQDGASNMSSMT--------INQFLFS- 162
Query: 342 LETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHI---QTI 398
L+ +N+ FV + I K + +L S+ +I DE I Q +
Sbjct: 163 LDIDNINIVKLCQFVK----ESNIIHKVSGYA-NKLTSIQNQFDIQLHDEGSSIACLQAL 217
Query: 399 CDFA-TLVGTYTRGFSIIIEPFDERMPHIPDPV-LQLSCHDASLAVKPVFDRFQSVVITS 456
DF +L+ + G I+ + +++ PD L+ A V +V++
Sbjct: 218 VDFIRSLLNSNNDGRIIVAK---QKLGGQPDEAYLKFVMLCAEKIFSEVTQDAYAVILAG 274
Query: 457 GTLSPID-----LYPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFDMR 509
GTL PI+ L P L P + F + + + I P+ +TRG + ++ R
Sbjct: 275 GTLQPIEETRLRLCPSL---PPTDIKFFTCNHIVPPESILPIAVTRGPSGMTFDFSYNSR 331
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
S P + G+ + ++++VP+G+V FF SY Y + W +G + +I + K VF E
Sbjct: 332 SSPSMIEELGRFICNIITVVPEGVVMFFSSYDYERRVYDAWMTAGTISKISKKKHVFREP 391
Query: 570 QDVVETTLALDNYRKACD-CGR--------GAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
++ + L+ Y++ + C + GA+ +V GK++EGI+F GR VIM G
Sbjct: 392 RNSADVEGVLNKYKETIESCSKISQDTGVNGALLLAVVGGKISEGINFSNGMGRCVIMVG 451
Query: 621 VPFQYTLSKILLARLEYLR-------------------DTFQIKEG------------DF 649
+P+ L+ ++++ D +++ G ++
Sbjct: 452 LPYPSPSDVELIETIKHIESISSSFLVGDDKASSRKYDDECELQPGYDIFRKCTRGGREY 511
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS-------KLPGWILSHLRDA 702
++ Q +GR IR DY M+ D RY++ KLP WI + L A
Sbjct: 512 YENLCMKAVNQSIGRAIRHINDYAAMLLVDSRYAQTSSTKNFSCPTDKLPQWIKARLSCA 571
Query: 703 HLNLSTDMALH 713
+LH
Sbjct: 572 QNYGEVHRSLH 582
>gi|344278065|ref|XP_003410817.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Loxodonta africana]
Length = 904
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+++ G
Sbjct: 607 VVKECRAVVIAGGTMQPVSDFREQLLACAGVGAERVVEFSCGHVIPPDNILPLIICSGPS 666
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y+ ++ A W SG+L
Sbjct: 667 NQQLEFTYQKRELPQMMDETGRILCNLCNVVPGGVVCFFPSYEYLRQVYARWEQSGLLVR 726
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K CG+ GA+ SV GK++EGI+F +
Sbjct: 727 LAVKKKIFQEPKRANQVEQVLMEYSKCIKCCGQAAGTMTGALLLSVVGGKMSEGINFSDN 786
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T Q G L + ++ Q VGR
Sbjct: 787 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRTPGQAPPGKALVENLCMKAVNQSVGRA 846
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D+RY+R +KLP WI RD + + A R+F R+ +
Sbjct: 847 IRHQKDFASIVLLDQRYARPPTLAKLPAWI----RDRVEVKATFGPAFAALRKFHREKSG 902
Query: 725 P 725
P
Sbjct: 903 P 903
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V +
Sbjct: 224 TKIYYCSRTHSQLAQ------FVHEVQKSPFGKDTRLVSLG--SRQNLCVNEDVKNLGSV 275
Query: 128 DSVDAACRKRTASWVRALAA---------ENPNIETCEFFENYEKAA--SAAVLPPGVYT 176
V+ C + S + C F+ NYE+ VL V
Sbjct: 276 QLVNDRCMEMQRSKHEKKSEAEEEKPKRRRQEGQAACPFY-NYEQMQLLRDEVLVE-VKD 333
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++ L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEA
Sbjct: 334 IEQLVAMGKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGVRLQGQ-VVIIDEA 392
Query: 237 HNIDNVCIEALSVSVRRQTLEGAT--RNLSRINQEIERFKATDAGRLRAE 284
HN+ I+A++ S+ L G+ + S++ Q +ER++ RL+A+
Sbjct: 393 HNL----IDAIT-SIHSTELSGSQLCQAHSQLLQYMERYRK----RLKAK 433
>gi|294654380|ref|XP_456430.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
gi|218511979|sp|Q6BZD9.2|CHL1_DEBHA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|199428836|emb|CAG84382.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
Length = 820
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 144/676 (21%), Positives = 286/676 (42%), Gaps = 114/676 (16%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
PVK+ + +RT ++ + +L + +++ +I L+SRK LC++ ++ N
Sbjct: 190 PVKIFFSSRTHSQLSQFSHQLNMTE-FESSLDNIPERIKFSPLASRKQLCIHPKISKLSN 248
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-------GVYTLQD 179
S++ AC + + + +CE+ S ++ ++ ++D
Sbjct: 249 VSSINDAC----------IDLQQSSKNSCEYIPKLHNTQSEEIVKKFSDLSFTKIHDIED 298
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G + CPY+ R + ++ YQ LL ++ + +++ DEAHN+
Sbjct: 299 LGKLGNKLKICPYYSVRKGIDVTEIIALPYQMLLQDSTRSALNLNIDDSIIII-DEAHNL 357
Query: 240 DNVCIEALSVSVRRQTLEGATRNLS-RINQEIERFKATDA------GRLRAEYNRLVEGL 292
+V SVS+ L T++L +N+ I+R + + +L + +
Sbjct: 358 LDVISSIYSVSITSNELSDITKSLKFYLNKFIKRLNSGNRINIMKLIKLCQVLEKFISSN 417
Query: 293 ALRGNLPNAWLSNPALPSDILKEAVPG---NIRRAEHFLH---VLRRLVQYLRGRLETEN 346
+ G + + + + SDI E G NI + E FL+ + ++ Y++ ++E+
Sbjct: 418 SKDGKIKHG---DEIITSDIF-EGTTGDLVNIHKIEQFLNKSKIAYKIESYMQKLNDSES 473
Query: 347 VE-KEGPVSF-VASITAHAGIDQKTLRFCYERLH-SLMLTLEITDTDE-FLHIQTICDFA 402
++ + P+ F + K +F +++ + S+ + + D E F I
Sbjct: 474 IKNRSNPLLFKITKFLKCLTNPSKEGKFFWDKTNDSVSINYMLLDPSEIFRDIVKRARCV 533
Query: 403 TLVGTYTRGFSIIIEPFDER----MPHI-PDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
L G +EP ++ P+I P+ + + SC G
Sbjct: 534 LLCGG-------TMEPMNDYTNYLFPYIPPEQIKKFSC---------------------G 565
Query: 458 TLSP---IDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGV 514
+ P ++++P + N++ + SF+ S + R++ +
Sbjct: 566 HIIPQENLEVFP-IGNYNDI---SFEFSFDK-----------------------RNNSKM 598
Query: 515 ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVE 574
G ++ ++ PDGIV FF SY Y++ ++ W + I++ + + K +F E +D +
Sbjct: 599 IIELGHAILNIIESTPDGIVIFFPSYKYLNVVMNVWRQNKIIESLTKVKAIFQEPEDSSK 658
Query: 575 TTLALDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA 633
L++Y + A+ SV GK++EGI+F R VIM G+PF S L+A
Sbjct: 659 VEKVLNDYSSTNKSEKHSALLLSVVGGKMSEGINFSDELARGVIMIGLPFPNIFSAELIA 718
Query: 634 RLEYLRDTFQIKEG----------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
+ +++ ++ K G +F +R Q +GR IR K DY ++ D+RY
Sbjct: 719 KRKFIEESTIAKGGTKSQAMVNAKNFYENICMRAVNQSIGRSIRHKNDYSIIYLFDQRYG 778
Query: 684 RHDKRSKLPGWILSHL 699
+ KL GW+ L
Sbjct: 779 SDKIQDKLSGWVKQKL 794
>gi|156089201|ref|XP_001612007.1| DNA repair helicase (rad3) family protein [Babesia bovis]
gi|154799261|gb|EDO08439.1| DNA repair helicase (rad3) family protein [Babesia bovis]
Length = 948
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 151/301 (50%), Gaps = 31/301 (10%)
Query: 450 QSVVITSGTLSPI-DLYPRL----LNFHPVVSRSFKMSLTRDCICPMVLTRGS-DQLPVS 503
+SV++TSGTLSP+ DL + + F +S S + ++ +CP V+T G D +S
Sbjct: 537 RSVILTSGTLSPLADLANSIGGDKVRFEYQLSSSHIVPVSN--LCPRVITGGDVDGSILS 594
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
+ ++ RS P + G+ ++ V VP G++ FFVSY +++ + W +GI + + K
Sbjct: 595 SDYNNRSTPSYIKALGESVLTFVRCVPAGVLVFFVSYPVLEDTVNAWKSAGIFAALEKEK 654
Query: 564 LVFIETQ---------------DVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDF 608
VFIE++ +V +T L Y D G G +F V RGK+AEGIDF
Sbjct: 655 RVFIESKGSAKSFVGNYYNRNTNVDDTQSQLKEYFTLTDKGVGCLFLGVCRGKLAEGIDF 714
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD---FLTFDALRQAAQCVGRV 665
R V + GVP+ + + +++YLR + + + T A+R Q +GRV
Sbjct: 715 SDDSCRGVFLCGVPYPNPYEETIALKMDYLRKLYGKNNENVTHWFTSQAIRAVNQAIGRV 774
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR-DAHLNLSTDMALHIAREFLRKMAQ 724
IR DYG ++ AD+R+S + W+ ++ ++N S L +F KM+
Sbjct: 775 IRHINDYGAIVLADRRFSAEHILKSVSSWVTRNIMISDNMNASKIDIL----DFFEKMST 830
Query: 725 P 725
P
Sbjct: 831 P 831
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 73/298 (24%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLI-------- 56
++ + V FPY Y Q YM + +A+ + LLE PTGTGKT++L+
Sbjct: 11 IDGIEVRFPY-TPYENQTVYMETVIKAVRHGKNALLESPTGTGKTLSLICSTLACIWHTR 69
Query: 57 ----TSYVLS------------------------------KPENPVKLIYCTRTVHEMEK 82
TS+ L K ++++Y +RT +++++
Sbjct: 70 FKDETSFNLKPVQTTSEEGLMKTMQDLRDSIQQKKTIVKFKGSKKLRILYASRTHNQLKQ 129
Query: 83 TLAELKLLHNYQTRHLGPAAK--ILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTAS 140
+ E K +T + A + + L SR LC++ A ++++A CRK
Sbjct: 130 VIREAK-----KTSYAKEFASKGLTTVLLGSRDQLCIHPGKKNATG-EALNAFCRKMVKH 183
Query: 141 WVRALAAENPNIETCEFFENYEKAA-SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMV 199
+ C ++ +K S + ++DL + GK CP++ R
Sbjct: 184 ------------QGCMYYRGLKKKEISRKIQFYEFVDIEDLISLGKSTRCCPFYACRDAH 231
Query: 200 QFANVVVYSYQYLLDPKVAGIISKEMQ----KESVVVFDEAHNIDNVCIEALSVSVRR 253
+ A+V + Y YLL P IS++ +V++ DEAHNI++V + ++R+
Sbjct: 232 ESADVTMLPYNYLLSP-----ISRDAMDIVLDNAVLIIDEAHNIESVAESSAGFTIRQ 284
>gi|124808195|ref|XP_001348254.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23497145|gb|AAN36693.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1160
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 149/295 (50%), Gaps = 30/295 (10%)
Query: 431 LQLSCHDASLAVKPVF-DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
+ L C A+ ++ + ++ S+++TSGTLSPI+ + + L+ + SFK L D +
Sbjct: 539 ISLLCFSATASLCGIIKEKINSIIVTSGTLSPIEPFSKQLSGNYF---SFKHILENDHVI 595
Query: 490 PM------VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
+T ++Q+ +ST ++ R++ R+ G + +++ +P G++ FF SYS M
Sbjct: 596 KSHQLFVGCMTHYNNQILLST-YENRANENYIRSLGNCIFDIIVCIPYGVLIFFSSYSSM 654
Query: 544 DEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-GAVFFSVARGKV 602
E + +W I +I +K +F+E + LD Y R GA+ V RGK+
Sbjct: 655 TETVNSWKKMKIYDKINTYKTIFVEPNKATDLKDILDQYEILIKKKRKGAILMGVCRGKI 714
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD-------------- 648
+EGIDF R VI+ G+P+ ++ + E+L D F+ ++ D
Sbjct: 715 SEGIDFKDDCCRAVIICGLPYGNVYDSKIIFKKEFL-DNFKYQKTDERPNSSNITSNISK 773
Query: 649 ---FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+ +A+R Q +GRVIR K DYG + F D R+S + + ++ W+ +H R
Sbjct: 774 GNKWYNEEAMRSINQSIGRVIRHKNDYGAIFFLDSRFSNNQRIKEISKWVRTHFR 828
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 54/293 (18%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL- 61
+ + D+ VYFPY+ +Y QY+YML + AL + + +LE PTGTGKT+ LL SYV+
Sbjct: 22 YTINDIEVYFPYE-LYDCQYNYMLSVLSALKKRENAILESPTGTGKTLCLLCASISYVVD 80
Query: 62 ------------------------------SKPENPV-----KLIYCTRTVHEMEKTLAE 86
S P+ V K+IY +RT ++++ + E
Sbjct: 81 ILEKKGHFNENINISENNKNISLEFGKSNESVPKKVVANEFPKIIYASRTHSQLKQVIKE 140
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
LK ++ + K+L L SR LCV++ + + ++ KRT +
Sbjct: 141 LKNVYFIKN---NEKYKLLTTILGSRDQLCVHN--INYNYKGTLLNNMCKRTRKNGECIY 195
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDL---RAFGKQQGWCPYFLARHMVQFAN 203
+ K P V TL ++ + G+ +CP++ R + +
Sbjct: 196 HNG--------LKYLYKLKHLFTTPMDVETLSEIGKGNSVGQNIHFCPFYATREIQNECH 247
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
+++ Y YL + I+ ++ S+++ DE HNI+NV EA+S ++ L
Sbjct: 248 IILLPYNYLFEESTRKILKLNLE-NSIIIIDEGHNIENVAEEAVSFKLKDTDL 299
>gi|449664763|ref|XP_002167953.2| PREDICTED: regulator of telomere elongation helicase 1-like [Hydra
magnipapillata]
Length = 1225
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 144/282 (51%), Gaps = 24/282 (8%)
Query: 435 CHDASLAVKPVFDR-FQSVVITSGTLSPID------LYP---RLLNFHPVVSRSFKMSLT 484
C + L +K + D+ +S+++TSGTLSP+ L P L N H + + +
Sbjct: 483 CFNPGLTMKELRDQGVRSIILTSGTLSPLASLKAEFLIPFDVELENGHVIEKQQVFVG-- 540
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+L +G D +++ + RS + G +V + I+PDG++ FF SY MD
Sbjct: 541 -------ILPQGPDGKKLNSSYQSRSTSEYQVSLGNTIVNLSRIIPDGLLVFFPSYPVMD 593
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDN-YRKACDCG-RGAVFFSVARGKV 602
++A W + GI I +K +++E + + +D Y K D +GAVFF+V RGKV
Sbjct: 594 MVLAKWQECGIWNRIATNKGLYVEGRGKLGFNETIDEFYLKIHDPALKGAVFFAVCRGKV 653
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL---RDTFQIKEGDFLTFDALRQAA 659
+EG+DF GR V++ G+PF + ++ + +YL + I ++ A R
Sbjct: 654 SEGLDFSDANGRGVVITGLPFPPSFDPRVILKQQYLDEHKSNVTISGKEWYRQQASRAVN 713
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
Q +GRVIR K D+G ++ D+R+ + + LP WI ++
Sbjct: 714 QAIGRVIRHKNDFGAILLCDERFCQPSAKEHLPSWIKQQTKE 755
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 66/278 (23%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL-------------- 53
V + FP++ Y Q YM ++ L + LLE PTGTGKT+ LL
Sbjct: 9 VNIDFPFEP-YECQIKYMEKVITCLQKGLNGLLESPTGTGKTLCLLCATLGWRETYVARL 67
Query: 54 ---------------SLITSYVLSKPENPV------------KLIYCTRTVHEMEKTLAE 86
SL ++ + E K+IY +RT ++ + + E
Sbjct: 68 QLERVGKLQQNAFSDSLGSTLGEASGEKNAGGSWERGFLDVPKIIYASRTHSQITQCVNE 127
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
LK TR++ KI +G SR+ +C+NS V+ EN + CR + A
Sbjct: 128 LK-----NTRYV---PKICVLG--SREQMCINSEVMREENNNGKVHMCRIKVAG------ 171
Query: 147 AENPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+ C F+ N E ++ +PPG+ ++DL + G ++ +CPY++AR + + A+++
Sbjct: 172 ------KQCFFYNNLEERSEDKDKVPPGMLDIEDLVSIGTEKKFCPYYMARELRKEADLL 225
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
Y Y+LD K + ++ ++V+ DEAHN+++ C
Sbjct: 226 FMPYNYVLDFKARNVHGVDLTN-TIVLLDEAHNLESHC 262
>gi|195131929|ref|XP_002010396.1| GI15901 [Drosophila mojavensis]
gi|229891624|sp|B4L1Z2.1|RTEL1_DROMO RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193908846|gb|EDW07713.1| GI15901 [Drosophila mojavensis]
Length = 1014
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 145/279 (51%), Gaps = 12/279 (4%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
++ C + ++ + + + +SV++TSGTL+P L P + V++ + + +
Sbjct: 454 IINFWCFNPGFGMEQLLNTQVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQS 511
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + + R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 512 QVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQC 571
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ ++ K +F+E + + T ++ + +A +GA F +V RGKV+EG+
Sbjct: 572 VDAWQASGLWADLSSRKPIFLEPRGKDQFTSTMEEFYQAIRDSKGACFMAVCRGKVSEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQ 660
DF GR VI+ G+PF ++ + YL +T + KE L+ DA R Q
Sbjct: 632 DFADRNGRAVIITGLPFPPLKDPKVILKRRYL-ETNRTKENQLLSGQEWYNLDATRAVNQ 690
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GRVIR + DYG ++ D R+ + +L WI HL
Sbjct: 691 AIGRVIRHRHDYGAILLCDARFQDASQVQQLSKWIRGHL 729
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 64/313 (20%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV------- 60
+ V+FP++ Y Q ++M ++ L + +LE PTGTGKT++LL +++
Sbjct: 9 IPVHFPFEP-YEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEH 67
Query: 61 -------------------------------LSKPEN--PVKLIYCTRTVHEMEKTLAEL 87
+ K N K+IY +RT ++ + + EL
Sbjct: 68 QINMQKLQMEQQQRQATGGSATGAISDLALTMGKANNWGVPKVIYASRTHSQLTQAMREL 127
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
K +T + A + ++ L SR LC++ V+ + + C+ +
Sbjct: 128 K-----RTAY----ASMRSVVLGSRDQLCIHPDVMKEQGNSNKVNMCKLKV--------- 169
Query: 148 ENPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+ +TC F E K P + ++DL G++ CPY+ ++ +V A++
Sbjct: 170 ---HAKTCSFQLRVESKKDHPDFRGPSIMDIEDLVKVGQRLKMCPYYASKELVSSADITF 226
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLDPK E+ ++V+ DEAHNI+ +C E+ SV +R + A +++ I
Sbjct: 227 MPYNYLLDPKARKANKIEL-SNTIVILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHI 285
Query: 267 NQEIERFKATDAG 279
+ + D+G
Sbjct: 286 MKIFTSADSQDSG 298
>gi|315047356|ref|XP_003173053.1| hypothetical protein MGYG_05640 [Arthroderma gypseum CBS 118893]
gi|311343439|gb|EFR02642.1| hypothetical protein MGYG_05640 [Arthroderma gypseum CBS 118893]
Length = 883
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 34/301 (11%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLY-PRLLNFHP---VVSRSFKMSLTRDCICPMV 492
D + + + + ++V++ GT+ P+D Y L ++ P + + ++ + + + +
Sbjct: 568 DPTSRFRELVEDARAVILAGGTMEPMDDYVDHLFSYVPREKIKTFTYGHVIPKINLTAIP 627
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
+ +G D + FD R + + G+ + SI+PDG+V FF SY Y+ ++ W+
Sbjct: 628 IDKGMDGTEFNFTFDHRKSEKMIDSLGRTIARFCSIIPDGVVVFFPSYDYLSTVLKVWSS 687
Query: 553 -SGILKEIMQHKLVFIETQDVVETTLA------------LDNYRKACDCGRGAVFFSVAR 599
SGIL + + K +F E Q + T + L Y + D GRG + SV
Sbjct: 688 GSGILNSLSRLKPIFHEPQSMGSTNVNANTNTNTSTDSLLSQYSASIDSGRGGLLLSVMG 747
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF------QIKEGD----- 648
GK++EGI+F GR VI+ G+PF T + I A+L+++ + EG+
Sbjct: 748 GKLSEGINFSDSLGRGVIVVGLPFPNTRNAIWQAKLQHVEKKAYELADSSLSEGERRARG 807
Query: 649 ------FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA 702
+ +R QC+GR IR K DY ++ D+RY + KLPGWI S L
Sbjct: 808 KAASRAYYENTCMRTVNQCIGRAIRHKGDYAAILMIDRRYQTERIQGKLPGWIRSSLPKH 867
Query: 703 H 703
H
Sbjct: 868 H 868
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK-----------LLHNYQTRHLGPAAK----ILAIGL 109
E VK+IYC+RT ++ + E++ L + + G + I L
Sbjct: 211 EESVKIIYCSRTHSQLIQFAQEMRRVMPISSIPPGLGDDLKEEKEGKVPEEGEWIKHTPL 270
Query: 110 SSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNI---ETCEFFENYEKAAS 166
+SRK LC+N V + +++ C L + PN+ C + E
Sbjct: 271 ASRKTLCINPSVRTLSSATAINERC----------LELQRPNVAAEHKCPYLPTKENELK 320
Query: 167 AAV----LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFA--NVVVYSYQYLLDPKVAGI 220
+ L V ++DL G + G CPY+ +R ++ + VV Y LL
Sbjct: 321 TSQFQDHLLSRVNDIEDLPPLGTKVGICPYYASRTAIRASATEVVTLPYSLLLQQSAREA 380
Query: 221 ISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGR 280
++ +K SV+V DEAHN+ + + SV+V +L L+++ RFK GR
Sbjct: 381 LNLSAKK-SVIVIDEAHNLIDAIVNIHSVTV---SLSQVKTALAQVTTYARRFKTRLKGR 436
Query: 281 LRAEYNRLV 289
R +L+
Sbjct: 437 NRVYIAQLI 445
>gi|405118752|gb|AFR93526.1| CHL1 helicase [Cryptococcus neoformans var. grubii H99]
Length = 853
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 167/678 (24%), Positives = 287/678 (42%), Gaps = 121/678 (17%)
Query: 69 KLIYCTRTVHEMEKTLAEL--KLLHNYQTRHLGPAAKILAIGLS-----SRKNLCVNSRV 121
K+ Y +RT ++ + +EL +Y + P+A+ + G+S SRK LC+N ++
Sbjct: 216 KVYYTSRTHTQLRQLTSELLKTSFASYDSVPESPSAEAPSHGVSLVPLGSRKQLCINEKI 275
Query: 122 LAAENR---DSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
A + + ++ AC L + CEF A A + T+
Sbjct: 276 RALARKGGDERMNEAC----------LDMQKSGKARCEFL-----PAKADEI-----TML 315
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
D+R +V Y LL + ++ K VVV DEAHN
Sbjct: 316 DVR------------------DTILIVTLPYNLLLQKNSREALGIKL-KNQVVVIDEAHN 356
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLA--LRG 296
+ + + ++ L A +S++ Q +RFK RL++ + ++ + LRG
Sbjct: 357 LIDTLLSIHCTTLTSTNLANA---MSQLQQYHQRFKT----RLKSIHFLWIQQVLSLLRG 409
Query: 297 --NLPNAWLSNPALPSDILKEAVPGNIRRAE--HFLHVLRR------------LVQYLRG 340
+ + ++ + KE+ P +AE ++RR LV YL+
Sbjct: 410 LIRVCDKFIQDAKAQR---KESGPVGKPKAEVLDVNTLMRRIGGGSDQVNPIELVAYLKE 466
Query: 341 RLETENVEKEGPVSFVASITAHAGI-DQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC 399
+ F + A + D KT R R S+ F ++++
Sbjct: 467 SKLARKIN-----GFFEHVAEQAALKDVKTSRSATARHASITA---------FHNVESF- 511
Query: 400 DFATLVGTYTRGFSII-IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGT 458
+LV G ++ I+ +E P + V++ + S K V + +SV++ GT
Sbjct: 512 -LLSLVDAKDDGRILLSIDDLNESEPVV---VIKYVLLNPSERFKEVVEEARSVILAGGT 567
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMRSDP 512
+ PI + L P + + +L+ + P V++ G + KF R+D
Sbjct: 568 MEPITDF--LQQLFPSIPKDRLSTLSCSHVIPKENLLTQVVSVGPRKSEFEFKFGNRNDE 625
Query: 513 GVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV 572
+ + G +L + +VPDG+V F SY+++D++ A W SG+L+ + + K +F E Q
Sbjct: 626 ALLTDLGAVLQATIGVVPDGVVVFLPSYAFLDKVRALWTKSGLLQRLGERKQLFYEPQTS 685
Query: 573 --VET-----TLALDNYRKACDCGR-----GAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
VET LA+ + G+ GA+ F+V GK++EGI+F + GR VIM G
Sbjct: 686 GDVETILRDYALAISSCYATSTAGQKSRKTGALMFAVVGGKLSEGINFSDNLGRCVIMVG 745
Query: 621 VPFQYTLSKILLARLEYLRDTFQIKEG---DFLTFDALRQAAQCVGRVIRSKADYGMMIF 677
+PF S L R+ Y+ +G + +R Q +GR IR DY ++
Sbjct: 746 LPFANVSSVELQERMRYVETIPGASQGASREMYENLCMRAVNQSIGRAIRHANDYATILL 805
Query: 678 ADKRYSRHDKRSKLPGWI 695
DKRY+ R+KLP WI
Sbjct: 806 VDKRYATSRIRNKLPKWI 823
>gi|82752532|ref|XP_727340.1| DNA repair helicase [Plasmodium yoelii yoelii 17XNL]
gi|23483134|gb|EAA18905.1| DNA repair helicase, putative [Plasmodium yoelii yoelii]
Length = 1069
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 27/306 (8%)
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVF-DRFQSVVITSGTLSPIDLYPRLLN-----FH 472
+D + + + L C A+ ++ + ++ S+++TSGTLSP++ + + L+ FH
Sbjct: 482 YDNQNNYTMSKTISLLCFSATASLCGIIKEKVNSIIVTSGTLSPVEPFSKQLSGSYFSFH 541
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
++ + + + M T ++QL +ST ++ RS+ + G + ++++ +P G
Sbjct: 542 HILENDHVIKSHQLFVGCM--THYNNQLLLST-YENRSNENYIKALGNCIFDIIACIPFG 598
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-G 591
++ FF SYS M E +ATW I +I +K +F+E + L Y R G
Sbjct: 599 VLIFFSSYSSMTETVATWKKLKIFDKINSYKTIFVEPNKAADLKDILFQYENIIKKKRKG 658
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL------------- 638
A+ V RGK++EGIDF R VI+ G+P+ ++ + E+L
Sbjct: 659 AILMGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKREFLDNFKSEITESNNS 718
Query: 639 ----RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
D K + +A+R Q +GRVIR K DYG ++F D R+S + + ++ W
Sbjct: 719 SETNNDNNTSKGNKWYNEEAMRSINQSIGRVIRHKDDYGAILFLDSRFSNNQRIKEISKW 778
Query: 695 ILSHLR 700
+ +H R
Sbjct: 779 VRAHFR 784
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 60/296 (20%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+ + DV V FPY+ +Y QY+YML + AL K + +LE PTGTGKT+ LL SY
Sbjct: 21 YTINDVEVCFPYE-LYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVN 79
Query: 60 VLSK---------------------------PENPV-----KLIYCTRTVHEMEKTLAEL 87
VL K P+ + K+IY +RT ++++ + EL
Sbjct: 80 VLEKKGHFNESINIRENKSNVSFGFKENDNGPKKAIKADYPKIIYASRTHSQLKQVIKEL 139
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
K ++ + K+L L SR LCV+ ++ C+ + + +
Sbjct: 140 KNVYFIKN---NEKYKLLTTILGSRDQLCVH----------NISYNCK---GTMLNNMCK 183
Query: 148 ENPNIETCEFFENYE---KAASAAVLPPGVYTLQDL----RAFGKQQGWCPYFLARHMVQ 200
C + + K P V TL ++ + G+ +CP++ R +
Sbjct: 184 RVRKSGECMYHNGLKHLYKYKHLFTTPMDVETLNEIGKGNNSVGQNIHFCPFYATREIQN 243
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
+V++ Y YL + I+ +++ +++ DE HNI+NV EA+S +R L
Sbjct: 244 ECHVILLPYNYLFEENTRRILKLDLE-NCIIIIDEGHNIENVAEEAVSFKIRDSDL 298
>gi|308802574|ref|XP_003078600.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
gi|116057053|emb|CAL51480.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
Length = 970
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 153/657 (23%), Positives = 257/657 (39%), Gaps = 107/657 (16%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAE 125
NP K+ C+RT ++ + L ELK Y R+ LSSR+ +C +
Sbjct: 225 NP-KIFICSRTHSQLGQILGELKRT-GYSPRY---------SVLSSRQRMCQMQKN---- 269
Query: 126 NRDSVDAACRK-------RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
DA C++ + + N + E Y S + P + ++
Sbjct: 270 -----DAECKQLIGSDEGKKKTGTTGCPYYNKHTHVVRAMERYPLNGSQGMYPQ-AWDME 323
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
D + C +F R M + A+VV Y YL D + +S E + + V+ DE HN
Sbjct: 324 DFERVVDEVDGCSFFALRKMYESADVVFCPYNYLFDINIRRKMSIETEG-ACVIIDEGHN 382
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL-ALRGN 297
I++VC E S Q + A LS+ + G + E N L + ++
Sbjct: 383 IEDVCREGASAEFSLQAVGEAMDALSK-----------NLGHVNVETNMLADFFRSISAF 431
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVA 357
L + + +N A + I VP +Q + R +
Sbjct: 432 LEDMFRTNRAESTIIQSNQVPS--------------FLQEMLSRFDA------------- 464
Query: 358 SITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFL-HIQTICDFATLV---GTYTRGFS 413
AH D TL E ++ LM T T HI D A++V T ++
Sbjct: 465 ---AH---DMATLS---ETVNDLMTTKAKHLTPIVAPHISLAGDLASIVTMASTQPEAYN 515
Query: 414 IIIE-PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH 472
+I D P ++Q C S+A V + +SV++TSGTLSP + F
Sbjct: 516 VIFGMKVDINSDSCPGVIIQ--CMKPSVAFNSVAKKARSVILTSGTLSP------MTTFE 567
Query: 473 PVVSRSFKMSLTRDCICP-----MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+ F + + P + +T ++ + A+N G L+
Sbjct: 568 AELGVRFGAKIEAPHVVPNENVYVEVTGALGEITYKATESENAGRRFAQNLGNYLLRYAK 627
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
I+P G++ FF YS ++ ++ W+ SG+ ++ HK + ET+ L+ + + +
Sbjct: 628 IIPGGMLVFFPKYSLIERVVREWHMSGLFGQLNDHKFLCCETRGAKGFQETLNQFDRG-N 686
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY-----LRDTF 642
G++ +V RGKV+EGIDF R V G+PF + A+ E+ +
Sbjct: 687 TRSGSLMLAVYRGKVSEGIDFKDDKARAVFCVGIPFPSVFDPRVKAKKEFNDSPTSKQQG 746
Query: 643 QIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+ G++ A R Q +GR IR DY + D R+ W+L+++
Sbjct: 747 MLAGGEWYRAQAYRAYNQALGRCIRHPKDYAALFLVDARFREGG------AWMLNNI 797
>gi|388854508|emb|CCF51895.1| related to CHL1-protein of the DEAH box family [Ustilago hordei]
Length = 931
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 139/283 (49%), Gaps = 26/283 (9%)
Query: 443 KPVFDRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSD 498
K + D +SV++ GT+ PI D +LL F P +V+ S + + VL+
Sbjct: 627 KSLVDEARSVILAGGTMEPISDFRQQLLPFLPSDRLVTFSCGHVIPPSNLMVSVLSSSPK 686
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG---I 555
LP K D R + + GK LV + +I+P G+V F SY+++D+++A W D+ +
Sbjct: 687 GLPFEFKLDSRDNTDMLDQLGKTLVNLCNIIPAGLVVFVPSYAFLDKLMARWKDAASGQV 746
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKACDC-----GRGAVFFSVARGKVAEGIDFDR 610
L+ + K +FIE + ++ L Y A G GA+ +V K++EGI+F
Sbjct: 747 LQRLSAKKKIFIEPKTTMQVDKVLAEYTAAIRAEQGRGGGGAIMLAVVGAKLSEGINFSD 806
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-------------IKEGDFL-TFDALR 656
R V+M G+PF S L R++Y+RD + GD L T ++
Sbjct: 807 DLARGVVMVGMPFANINSPELAERIKYVRDLAKQARTTSNLSMPKVADPGDELYTNLCMK 866
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
Q +GR +R + DY +I D+RY R + R +LP WI + +
Sbjct: 867 AVNQSIGRAVRHQKDYAALILLDRRYGRPEIRQRLPAWIRNQV 909
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHL-GPAAKILAIGLSSRKNLCVNS-- 119
+PE ++IY +RT ++ + +AELK Q L + I L+SRK +C+N
Sbjct: 234 EPETLPRIIYASRTHSQLSQFVAELKKTSFGQVDVLDAEKMPVRTIALASRKQMCINQDV 293
Query: 120 -RVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP------P 172
R+ + + ++++ C + ++A + C +++ A +L
Sbjct: 294 QRIASIKGSEAMNERCLE----LIKAKKGKG----RCALLPTFDQVGRAEILEFRDAAMA 345
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
V ++DL G CPYF AR + A +V Y LL + + K +V+
Sbjct: 346 EVGDIEDLVQLGISTKTCPYFAARSSAKQAELVTLPYNLLLQKDARQSLGISL-KGCIVL 404
Query: 233 FDEAHNIDNVCIEALSVSV-RRQTLEGATRNLSRINQEIERFKATDAGRLR 282
DEAHN+ + + SV++ RQ ++ + + +++ R K + LR
Sbjct: 405 IDEAHNLIDTILSTHSVTIDSRQIIQASKQIEMYLDRFALRLKGNNEQNLR 455
>gi|194382496|dbj|BAG64418.1| unnamed protein product [Homo sapiens]
Length = 127
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M ++ + VYFPYD IYPEQ+SYM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
+ P KLIYC+RTV E+EK + EL+ L N+ + G L + LSSRKNLC++
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Query: 121 VLAA 124
+A
Sbjct: 121 TTSA 124
>gi|392591953|gb|EIW81280.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 867
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 154/624 (24%), Positives = 257/624 (41%), Gaps = 66/624 (10%)
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFF 158
GP+ L SRK LC+N V A +D CR+ E + C++
Sbjct: 255 GPSTPWRTASLGSRKQLCINDEVKAKHG--DLDEKCRE---------LLEEKGKKRCQYL 303
Query: 159 ENYEKAASAAVLPPGVYT----LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLD 214
E+ A L + + +L A G+ CPY+ +R V A +V Y LL
Sbjct: 304 PPLEEEHRLADLRDQILASPKDIVELAAAGRNSHICPYYGSRKAVPQAELVTLPYNLLLL 363
Query: 215 PKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
+ ++ + VV+ DEAHN+ + S S+ TL A LS++ +RF+
Sbjct: 364 KSAREALGIDLTGQ-VVIIDEAHNLIPTLLSISSSSLSFGTLSAA---LSQVTVYYKRFR 419
Query: 275 ATDAGRLRAEYNRLVEGLA-LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRR 333
+ RLVE ++ L+ L S P+ + + + +++L
Sbjct: 420 NRFSPTHALHLKRLVEFMSSLQRFLKEKAASKPSTQEAMTVPDLGCALGHKVEGINLLE- 478
Query: 334 LVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFL 393
+V+YL+ T V ++ VS A +Q++ Y R + L
Sbjct: 479 IVEYLK----TSKVARK--VSGYCEKEAIRKSEQESQHRTYTR----------GKGNPPL 522
Query: 394 HIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVV 453
H I F T + + +I+ R D ++ + + + V D +SVV
Sbjct: 523 H--AIESFITGISAASEDGRLILSLG--RESDASDSEIKYQLLNPATIFRDVVDVARSVV 578
Query: 454 ITSGTLSPI-DLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKF 506
+ GT+SPI D+ +L P +S + + + I P +++ +G + F
Sbjct: 579 LAGGTMSPISDVTNQLF---PYLSDASLSTFSCGHIVPQSHVQALLVGKGPSGRTLDFSF 635
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
+ D + G+ + V++VP G+V FF SY+Y+ W SGI ++ + K +F
Sbjct: 636 GNQKDKQLVNELGRTIANFVNLVPGGMVVFFPSYTYLYFAKEMWGTSGIWDQLARKKQLF 695
Query: 567 IETQDVVETTLALDNYRKAC-----DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
IE ++ L Y A D +GA+ F+V GKV+EG++F R V++ G+
Sbjct: 696 IEPREATGVESLLRAYSAAAITQPDDGTKGALLFAVVGGKVSEGLNFSDDMARAVMVVGL 755
Query: 622 PFQYTLSKILLARLEYLRDTFQIKEGDFLTFD----------ALRQAAQCVGRVIRSKAD 671
PF S L RL Y+++ L + Q +GR IR K D
Sbjct: 756 PFANKASIELQERLRYVKELESKISNKHLGAKNTASELYVNMCMSAVNQSIGRAIRHKMD 815
Query: 672 YGMMIFADKRYSRHDKRSKLPGWI 695
+ +I D R+ + KLP WI
Sbjct: 816 WAALILVDHRFGTASIQGKLPQWI 839
>gi|68069879|ref|XP_676851.1| DNA repair helicase [Plasmodium berghei strain ANKA]
gi|56496730|emb|CAH94015.1| DNA repair helicase, putative [Plasmodium berghei]
Length = 939
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 155/307 (50%), Gaps = 29/307 (9%)
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVF-DRFQSVVITSGTLSPIDLYPRLLN-----FH 472
+D + + + L C A+ ++ + ++ S+++TSGTLSP++ + + L+ FH
Sbjct: 352 YDNQNNYTMSKTISLLCFSATASLCGIIKEKVNSIIVTSGTLSPVEPFSKQLSGSYFSFH 411
Query: 473 PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDG 532
++ + + + M T ++QL +ST ++ RS+ + G + ++++ +P G
Sbjct: 412 HILENDHVIKSHQLFVGCM--THYNNQLLLST-YENRSNENYIKALGNCIFDVIAYIPFG 468
Query: 533 IVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-G 591
++ FF SYS M E +ATW I +I +K +F+E + L Y R G
Sbjct: 469 VLIFFSSYSSMTETVATWKKLKIFDKINSYKTIFVEPNKAADLKDILFQYENIIKKKRKG 528
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-------- 643
A+ V RGK++EGIDF R VI+ G+P+ ++ + E+L D F+
Sbjct: 529 AILMGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKREFL-DNFKSEITESNN 587
Query: 644 ---------IKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPG 693
I +G+ + +A+R Q +GRVIR K DYG ++F D R+S + + ++
Sbjct: 588 YSEKNNDNNISKGNKWYNEEAMRSINQSIGRVIRHKDDYGAILFLDSRFSNNQRIKEISK 647
Query: 694 WILSHLR 700
W+ +H R
Sbjct: 648 WVRAHFR 654
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 171 PPGVYTLQDL----RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226
P TL ++ + G+ +CP++ R + +V++ Y YL + I+ +++
Sbjct: 80 PMDAETLNEMGKGNNSVGQNIHFCPFYATREIQNECHVILLPYNYLFEENTRRILKLDLE 139
Query: 227 KESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
+++ DE HNI+NV EA+S +R L
Sbjct: 140 -NCIIIIDEGHNIENVAEEAVSFKIRDSDL 168
>gi|392577022|gb|EIW70152.1| hypothetical protein TREMEDRAFT_29466 [Tremella mesenterica DSM
1558]
Length = 840
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 137/271 (50%), Gaps = 22/271 (8%)
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRG 496
+ V ++ +SVV+ GT+ PI+ + R L P V+ S ++L+ + P V++ G
Sbjct: 540 REVVEQARSVVLAGGTMEPINDFLRQL--FPFVTPSRIITLSCSHVIPKSNLLTQVVSCG 597
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
++ + K+ RSD + G +++ V +VPDGIV F SYS++D+I TW + +L
Sbjct: 598 PRKIELEFKYSNRSDDSLLAELGSVILSTVGLVPDGIVVFLPSYSFLDKIKHTW--TAVL 655
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKAC---------DCGRGAVFFSVARGKVAEGID 607
++ + K VF E Q E L +Y A D +GA+ F+V GK++EGI+
Sbjct: 656 PKLAEKKHVFYEPQTSGEVETVLRDYSLAISTVSPPGIGDKRKGALLFAVVGGKLSEGIN 715
Query: 608 FDRHYGRLVIMFGVPFQYTLSKILLARLEY---LRDTFQIKEGDFLTFDALRQAAQCVGR 664
F GR VIM G+PF S L R++Y L + +R Q +GR
Sbjct: 716 FSDRLGRCVIMVGLPFANIASVELSERMKYVSGLPGAGPDASKELYENLCMRAVNQSIGR 775
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR DY ++ DKRY+ R KLP WI
Sbjct: 776 AIRHANDYACILLVDKRYASQRIRRKLPKWI 806
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLA-AEN--RDSVDAACRKRTASWVRALAAENPNIETC 155
G I + L SRK LC+N +V A A N + ++ AC S C
Sbjct: 219 GDTHGISMVPLGSRKQLCINDKVRALARNGGDERMNEACLDMQKS------------SEC 266
Query: 156 EFFENYEKAA----SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQY 211
EF E A AVL V ++D+ G++ G CPY+ R V+ A +V Y
Sbjct: 267 EFLPKSEDVAMLDARDAVLAE-VRDIEDIVQMGRKCGVCPYYSTRRAVKQAQLVTLPYNL 325
Query: 212 LLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE 271
LL + ++ K VVV DEAHN+ + + S ++ L A +S++ Q +
Sbjct: 326 LLQKNAREALDIDL-KGQVVVIDEAHNLIDTILSIHSTTLTHHHLTSA---ISQLQQYLS 381
Query: 272 RFK 274
RFK
Sbjct: 382 RFK 384
>gi|340052773|emb|CCC47058.1| putative helicase [Trypanosoma vivax Y486]
Length = 968
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 148/289 (51%), Gaps = 25/289 (8%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
VL C D S +++ + S+++TSGTLSP+D + + H V S + +
Sbjct: 432 VLGYWCLDISPSLQTLVKSVHSLILTSGTLSPLDHFAAEIGIHFEVCLSGGHVIAPSQVA 491
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
+L +G ++ + RS G LV + P G++ FF SY ++ +
Sbjct: 492 GCILCKGPSGERLNGSYAFRSSLDYRIGLGMALVNISRNTPGGVLVFFPSYVALNAAVDL 551
Query: 550 W-------NDSGILKEIMQH-KLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVAR 599
W N++ + +++H K VF+E DV +T+ + ++++ D RGA+ +V R
Sbjct: 552 WRAGSGRTNETETIWAMLEHVKPVFVEPTDVRDTSTIVTSFQREVDAAPSRGAILLAVCR 611
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPF-QYT----------LSKILLARLEYLRDTFQIKEGD 648
GKV+EGI+F ++GR V++ G+PF YT +S + R + TF D
Sbjct: 612 GKVSEGINFADNHGRCVLVAGIPFANYTDLFVRLKREYVSSVAAQRPKVRGRTF--TGDD 669
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
+ +A+R QCVGRVIR K DYG+++ AD+R+S DK L GW+ S
Sbjct: 670 WYINEAMRCVNQCVGRVIRHKDDYGVVVLADERFS--DKIDALSGWLAS 716
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 142/275 (51%), Gaps = 36/275 (13%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+ V + FP+D YP Q YM + ALD + LLE PTGTGKT+ LL + +++ +
Sbjct: 6 IRGVEISFPFDP-YPAQVEYMQAVMDALDNAANALLESPTGTGKTLCLLCAVLAWLEKRQ 64
Query: 65 E---------NP--VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRK 113
+P +++YC+RT ++ + ELK +T + +A +AI + SR+
Sbjct: 65 SISFSGGATGSPGVTRVVYCSRTHTQLSHVIRELK-----KTSY--SSAFSMAI-MGSRE 116
Query: 114 NLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE-KAASAAVLP- 171
++CV+S+VL ++ + A C E+ N C F+ ++ + A +L
Sbjct: 117 HMCVHSQVLRLQSVHAQQAMCNS---------LREDKN---CHFYRGFQSRLARNEMLSK 164
Query: 172 -PGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
V+ ++DL A G + G+CPY+ R + + ++++ Y Y+ D + + ++ K+ V
Sbjct: 165 ESCVHDMEDLFAEGYKCGFCPYYWERELAKESSIIFLPYNYIFDSTLRRQLPFDL-KDCV 223
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
++ DEAHN+ +V + V+++ L A + SR
Sbjct: 224 LIVDEAHNLPSVLGSSFCVNLQPLELANAIHDCSR 258
>gi|410046333|ref|XP_003952169.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DDX12-like [Pan troglodytes]
Length = 920
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 130/270 (48%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 598 VVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGIS 657
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
P+ F R P + G++L + +V G+VCFF SY Y+ ++ A W G+L
Sbjct: 658 NQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGR 717
Query: 559 IMQHKLVFIETQ---DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + V + LA +AC R GA+ SV GK++EGI+F +
Sbjct: 718 LAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDN 777
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+PF S L ++ YL T Q G L + ++ Q +GR
Sbjct: 778 LGRCVVMVGMPFPNIRSAELQEKMTYLDQTLPRAPGQAPPGKALVENLCMKAVNQSIGRA 837
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 838 IRHQKDFASIVLLDQRYARPPVLAKLPAWI 867
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H + G +++++G SR+NLCVN V + +
Sbjct: 220 TKIYYCSRTHSQLAQ------FVHEVKKSPFGKDVRLVSLG--SRQNLCVNEDVRSLGSV 271
Query: 128 DSVDAAC---------RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C +K+ A R C F+ + + V ++
Sbjct: 272 QLINDRCVDMQRSRHEKKKGAEXRR----RQEKQAACPFYNHEQMGLLRDEALAEVKDIE 327
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 328 QLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVIIDEAHN 386
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
+ + SV V L A S++ Q +ER+
Sbjct: 387 LIDTITGMHSVEVSGSQLCQAH---SQLLQYMERY 418
>gi|320581727|gb|EFW95946.1| ATP-dependent RNA helicase Chl1, putative [Ogataea parapolymorpha
DL-1]
Length = 802
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 137/278 (49%), Gaps = 26/278 (9%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH-PVVSRSFKMSLTRDCICPMVLTR 495
D S A + V + + V++ GT+ PI + +NF P V + D I P
Sbjct: 508 DPSEAFRDVVEECKCVILAGGTMEPISDF---INFLVPYVESKQIKHFSCDHIIP---AS 561
Query: 496 GSDQLPVSTK--------FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
D PV ++ FD R+D + G+ ++EMV++VPDG+V FF SY Y+D+++
Sbjct: 562 NLDVYPVKSRQGVEFEFSFDKRNDKKMIDALGETILEMVAVVPDGMVVFFPSYKYLDQLV 621
Query: 548 ATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGID 607
W SG I Q K ++ E+++ + L NY + RGAV F+V GK++EGI+
Sbjct: 622 ELWKKSGHYHRINQVKTIYTESRENAVDNV-LQNYSQCILERRGAVLFAVVGGKMSEGIN 680
Query: 608 FDRHYGRLVIMFGVPFQYTLSKILLARLEYL----------RDTFQIKEGDFLTFDALRQ 657
F R V M G+PF +S L+A+ +Y+ R+ +F ++
Sbjct: 681 FSDELARAVAMVGLPFPNLMSGDLIAKRKYVESKTIEMGGSREDALANAREFYENICMKA 740
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q VGR IR+ DY ++ D RY R + KL GWI
Sbjct: 741 VNQSVGRAIRNIRDYSVIYLIDVRYERPHIQKKLSGWI 778
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQT-RHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ + +RT ++ + +L+L H + + K LA+G SRK LC+N +V + ++
Sbjct: 187 KIFFSSRTHSQLSQFGQQLRLTHFPSSLESVEEKTKYLALG--SRKQLCINEKVSSLKDV 244
Query: 128 DSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
++ AC RK+ + P ET + + + + +++L
Sbjct: 245 QQINEACLELQRKKDGE---KGCSYMPRPETEDLTTQFRDLTFSEI-----RDIEELHEI 296
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
G CPY+ R ++ A +V YQ LL ++ ++ K S+VV DEAHN+
Sbjct: 297 GSHYRVCPYYSLRRGMEIAEIVSMPYQLLLQKSTRQVLGLDL-KNSIVVIDEAHNL 351
>gi|395845987|ref|XP_003795698.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Otolemur garnettii]
Length = 1234
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 173/719 (24%), Positives = 290/719 (40%), Gaps = 95/719 (13%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + EL+ +T + G IL SSR + CV+ V+ NR+
Sbjct: 244 KIYFGTRTHKQIAQITKELR-----RTAYSGVPMTIL----SSRDHTCVHPEVVGNFNRN 294
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP-----PGVYTLQDLRAF 183
C + + N ++C F+ K + L + +++L +
Sbjct: 295 E---KCME---------LLDGKNGKSCYFYHGVHKISDQHTLQTLQGMSKAWDIEELVSL 342
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
GK+ CPY+ AR ++ A+++ Y YLLD ++ + + KE VV+ DEAHNI++
Sbjct: 343 GKKLKACPYYTARELIGDADIIFCPYNYLLDSQIRESMDLNL-KEQVVILDEAHNIEDCA 401
Query: 244 IEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGR---------LRAEYNRLVE--- 290
E+ S SV L A L S +N I R K + R L A L+E
Sbjct: 402 RESASYSVTEVQLRFARDELDSLVNNNI-RKKDHEPLRAVCCSLINWLEANSEHLIERDY 460
Query: 291 --------GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRR--LVQYLRG 340
G + NL ++ P IL+ HF VL++ V + G
Sbjct: 461 ESSCKIWSGSEMLLNLHRMGITTATFP--ILQG----------HFSAVLQKEEKVSAIYG 508
Query: 341 RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
+ E +E P+ I+A I K L + L D D + IQ
Sbjct: 509 KEEA----REVPI-----ISASTQIMLKGLFMVLDYL--FRQNSRFAD-DYKIAIQQTYS 556
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPV--LQLSCHDASLAVKPVFDRFQSVVITSGT 458
+ T + + + P +++ V L C + ++A + + +++V+TSGT
Sbjct: 557 WINETNTSDKNMLVALLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVRTIVLTSGT 616
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNY 518
LSP+ + L + + + + G + F
Sbjct: 617 LSPMKSFSSELGVTFTIQLEANHVIKNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEV 676
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA 578
G LL+ + V GI+CF SY ++++ W +G+ + K V +E Q +T
Sbjct: 677 GALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFD 736
Query: 579 --LDNYRKACDCG---RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QYTL 627
L Y A GA+ +V RGKV+EG+DF R VI G+PF Q L
Sbjct: 737 ELLQLYYDAIKFKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVEL 796
Query: 628 SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 687
+ LR ++ + A R Q +GR IR + D+G +I D R+ +
Sbjct: 797 KRKYNDHHSKLRGVLSGRQ--WYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRSNPN 854
Query: 688 R--SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
R S L WI ++ + + + AL EF +K + + + G+ +++ LE
Sbjct: 855 RYISGLSKWIRQQIQH---HSTFESALESLAEFSKKHQKVTNVSKKQGKYIQNNESTLE 910
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+ + V + FPY YP Q + M + R L++K HCLLE PTG+GK++ALL ++ S
Sbjct: 8 YTIGGVKINFPY-KAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQS 66
Query: 63 ---KPEN 66
KPE+
Sbjct: 67 LSGKPED 73
>gi|297486418|ref|XP_002695655.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein,
partial [Bos taurus]
gi|296477040|tpg|DAA19155.1| TPA: BRCA1 interacting protein C-terminal helicase 1 [Bos taurus]
Length = 1169
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 166/671 (24%), Positives = 269/671 (40%), Gaps = 96/671 (14%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + EL+ +T + G IL SSR + CV+ V+ NR+
Sbjct: 181 KIYFGTRTHKQIAQITRELQ-----RTAYSGVPMTIL----SSRDHTCVHPEVMGNFNRN 231
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-----GVYTLQDLRAF 183
C + + N ++C F+ K + L + +++L +
Sbjct: 232 E---KCME---------LLDGKNGKSCYFYHGVHKMSDQHTLQTFQGMHKAWDIEELVSL 279
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G++ CPY+ AR ++Q A+++ Y YLLD ++ + + KE VV+ DEAHNI++
Sbjct: 280 GRKLKACPYYTARELMQNADIIFCPYNYLLDAQIRETMDINL-KEQVVILDEAHNIEDCA 338
Query: 244 IEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGR---------LRAEYNRLVE--- 290
E+ S SV L A L S IN I R K + R L A LVE
Sbjct: 339 RESASYSVTEVQLRFARDELDSMINYNI-RKKDHEPLRAVCCSLINWLEASSEHLVERNY 397
Query: 291 --------GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRR--LVQYLRG 340
G + NL ++ P IL+ HF VL+R V + G
Sbjct: 398 ESSCKVWSGSEMLLNLHKMGITTATFP--ILQG----------HFSAVLQREEKVPSIHG 445
Query: 341 RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
+ E +E PV I+A I K L + L D D + IQ
Sbjct: 446 KEEA----REIPV-----ISASTQIMLKGLFMVLDYL--FRQNSRFAD-DYKVAIQQTYS 493
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
+ T G I+ + VL C + ++A + + ++V+TSGTLS
Sbjct: 494 WINQSDTTDHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLS 553
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGK 520
P+ + L + + + + G + F G
Sbjct: 554 PMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGA 613
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ--------DV 572
LL+ + + GI+CF SY ++++ W +G+ + K V +E Q ++
Sbjct: 614 LLLSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWYNLELVKTVIVEPQGGEKIDFDEL 673
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QYT 626
++ Y+ D GA+ +V RGKV+EG+DF R V+ G+PF Q
Sbjct: 674 LQMYYDAIKYKGEKD---GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVE 730
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
L + + LR ++ + A R Q +GR IR K D+G +I D R+ +
Sbjct: 731 LKRQYNDQHSKLRGLLPGRQ--WYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNP 788
Query: 687 KR--SKLPGWI 695
R S L W+
Sbjct: 789 SRYISGLSKWV 799
>gi|110741966|dbj|BAE98923.1| hypothetical protein [Arabidopsis thaliana]
Length = 652
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 151/677 (22%), Positives = 273/677 (40%), Gaps = 117/677 (17%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+ + + V FP++ Y Q YM + +L K H LLE PTGTGKT+ LL ++
Sbjct: 4 YSIRGINVEFPFE-AYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWRKS 62
Query: 60 ---------------VLSKPENPVK------------LIYCTRTVHEMEKTLAELKLLHN 92
S + P+ ++Y +RT ++ + + ELK +
Sbjct: 63 LGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKR-SS 121
Query: 93 YQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAEN 149
Y+ + + L SR+ LCVN V + + +A C+KR
Sbjct: 122 YRPK---------MVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGK---------- 162
Query: 150 PNIETCEFFE---NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
C F +Y K P ++DL GK G CPY++ R + + +++
Sbjct: 163 ---RQCNHFNRLPDYLKHNPHIGDEP--VDIEDLVNIGKDSGPCPYYITRELHKDVDIIF 217
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YL+ + K SV++FDEAHN++++C ++ S + L
Sbjct: 218 APYNYLISNGYRKFL-KVNWTNSVLIFDEAHNLESLCADSASFDLPSVLLSACISEAQEC 276
Query: 267 NQ-EIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAE 325
Q R + + + E +++GL L+ L I K +P +R E
Sbjct: 277 VQLAAARRDSLNDVSINPENFAILKGLLLK------------LQELISKVPIP---KRDE 321
Query: 326 HFLHVLRRLVQYLRGRLETENVEKEGPVSFVASIT-AHAGIDQKTLRFCYERLHSLMLTL 384
F + Y+ L++ N+ E + ++ A ++++ R
Sbjct: 322 GFT----KPGPYIYEMLKSLNITHETAPKLIGTVEEAAVFLEEEKQR------------- 364
Query: 385 EITDTDEFLHIQTICDFATLV-----GTYTRGFSIIIEPFDER----MPHIPDPVLQLSC 435
T T+ ++ I D L+ + + + ++ ++ M L C
Sbjct: 365 --TATNAGSKLEIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLSWWC 422
Query: 436 HDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
+ + + + S+++TSGTLSP+D + L + ++ + + V++
Sbjct: 423 FSPGITMLDIAQKGVGSIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSNQLWAGVVS 482
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW---- 550
G +++ + R P + G +V +VP+G++ FF SY MD I W
Sbjct: 483 TGPSGYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGC 542
Query: 551 --NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGI 606
N + + I + K IE +D A+ ++ + G VFF+V RGKV+EG+
Sbjct: 543 YRNSMTVWERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGL 602
Query: 607 DFDRHYGRLVIMFGVPF 623
DF GR V++ G+P+
Sbjct: 603 DFADGAGRAVVITGLPY 619
>gi|432863481|ref|XP_004070088.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oryzias latipes]
Length = 859
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 164/694 (23%), Positives = 273/694 (39%), Gaps = 138/694 (19%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAEN 126
K+ YC+RT ++ + +H Q P +K I + L SR+NLC+N V +
Sbjct: 208 TKIYYCSRTHSQL------AQFVHEVQK---SPFSKDISLVTLGSRQNLCINEEVRRLGS 258
Query: 127 RDSVDAAC---RKRTASWVR----ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
++ C +K R A P C F + + VY ++
Sbjct: 259 IQRINDRCMEMQKNKHEKQRPEDGAKRKRGPAKSVCPFNKASALQQMRDEVLGTVYDIEQ 318
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKEMQKESVVVFDEA 236
L GK CPY+ R + A +VV YQ +L + AG+ K VV+ DEA
Sbjct: 319 LIKVGKDIHSCPYYATRLAIPPAKLVVLPYQMVLHEATRRAAGV----QLKGQVVIIDEA 374
Query: 237 HNIDNV--CIEALSVSVRRQTLEGAT--RNLSRINQEIERFKATDAGRLRAE-------- 284
HN+ + CI + L G+ R S++ Q +R+K+ RL+A+
Sbjct: 375 HNLSDTLSCIHS-------SELNGSQLCRAYSQLTQYADRYKS----RLKAKNLMYIKQI 423
Query: 285 ---YNRLVEGLALR-GNLPNAWLSNPALP----SDILKEAVPGNIR--RAEHFLH---VL 331
RLV L + G P + + ++ L +A NI + + + +
Sbjct: 424 LFAIERLVRVLGGKVGQNPQSQNTQAGTEMHTINNFLFKAEIDNINWFKLQRYFEKSMIS 483
Query: 332 RRLVQYL------------RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
R+L ++ + L EN EG ++++ KTL+
Sbjct: 484 RKLSGFVEKYAGSGVTLHTQNTLNKENRRTEGLLNYL-----------KTLKSNQNSASD 532
Query: 380 LMLTLE---ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCH 436
L + E + + I+ F L + T G ++ R + + ++
Sbjct: 533 LQESAEAEKVLSASPMMQIEGF--FMALTNSNTDGRVLV-----HRQGTLSESSIKFLLL 585
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICP 490
+ ++ V +SV+I GT+ P+ D LL +V + + + I P
Sbjct: 586 NPAVHFAEVLKECRSVIIAGGTMQPVSDFKEELLLSAGVGQERIVEFACGHVIPPENILP 645
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
+V+ G + F R P + G++L + ++VP G+VCFF SY Y+ I+ W
Sbjct: 646 IVMCSGPSGQELDFTFQSRDLPCMMDETGRILSNICNVVPGGVVCFFPSYEYLRRIMCHW 705
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVA 603
SG L + K +F E + + L + + C + GA+ FSV GK++
Sbjct: 706 EASGALTRLSNKKKIFQEPKKPNQVEHVLSEFSRCIQRCAQESSGLTGALLFSVVGGKMS 765
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVG 663
EGI+F GR V+M G+P+ S L ++ YL
Sbjct: 766 EGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYL------------------------- 800
Query: 664 RVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
D +++ D+RYSR SKLP WI S
Sbjct: 801 -------DKHLVVLCDRRYSRPATLSKLPAWIRS 827
>gi|358369042|dbj|GAA85657.1| DEAD_2 protein [Aspergillus kawachii IFO 4308]
Length = 519
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 27/273 (9%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSR----SFKMSLTRDCICPMVLTRGSDQLPVSTK 505
++V++ GT+SP+ Y L + SR S+ + + + L RG
Sbjct: 39 RAVILAGGTMSPMTDYMNHLFSYVPASRLDTFSYGHVIPPENLIAHTLVRGVQGSEFDFT 98
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE------- 558
+D+R + + G+ + + ++PDG+V FF SY Y+ +++ W + ++
Sbjct: 99 YDVRDSEKMIMDLGRTIATLCHVIPDGVVAFFPSYDYLGRVLSIWKKPMLSEQGQTVYGL 158
Query: 559 IMQHKLVFIETQDVVETTLAL-DNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
I Q K + E++D+ TT L Y K D GRGA+ SV GK++EGI+F GR V+
Sbjct: 159 IGQKKPILSESRDMTVTTEELLQTYAKTVDSGRGALLLSVVGGKLSEGINFSDKLGRAVL 218
Query: 618 MFGVPFQYTLSKILLARLEYL-RDTFQIKEG--------------DFLTFDALRQAAQCV 662
+ G+PF S + A+++Y+ + T Q G DF +R QC+
Sbjct: 219 IVGLPFPNIRSAVWQAKIQYIEQKTHQQATGPEASRQSAAKAAGRDFYENSCMRAVNQCI 278
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
GR IR + DY ++ D+RY + ++KLP WI
Sbjct: 279 GRAIRHRNDYAAIVLIDRRYDKPGIQAKLPAWI 311
>gi|340721189|ref|XP_003399007.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX11-like [Bombus terrestris]
Length = 857
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 151/677 (22%), Positives = 291/677 (42%), Gaps = 91/677 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAEN 126
+K+ +C+RT ++ + + EL+ P +K + I L+SR+N C+N V ++
Sbjct: 192 IKIFFCSRTHSQLSQFIGELRK---------SPYSKNVSVITLTSRQNYCINKNVKKLKH 242
Query: 127 RDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRA 182
+ ++ C RK+ + +C F ++ + +QD+
Sbjct: 243 LNLINECCLQLQRKKATAKDEKDLKRKKMTSSCPFVP----GNQDLLIRESLMQIQDIEE 298
Query: 183 F---GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
G+ C Y+ +R V + +++ Y +L K I S K ++++ DEAHN+
Sbjct: 299 IVQKGENLKTCAYYASRKAVSYGQLILVPYNTILH-KNTRISSGINLKGNILIIDEAHNL 357
Query: 240 DNVCIEALSVSVRRQTLEGATRNL----SRINQEIERFKATDAGRLRAEYNRL------- 288
+EA+ ++ + G RNL S+++Q +RF+ + + +L
Sbjct: 358 ----LEAIE-NMHSVIITG--RNLLHCYSQLSQYQKRFQTLFSAKNILSLTQLSFCLRKL 410
Query: 289 --VEGLALRGNLPNAWLSNPALPS--DILKEAVPGNIRRAEHF--LHVLR--RLVQYLRG 340
V G ++ N P+ ++ A P I + A+ NI F L ++ RL L+G
Sbjct: 411 ITVLGATIKSN-PDDVINIEASPKLYKIEEFAIMTNIDTVNMFELLKFIKNSRLNHKLQG 469
Query: 341 ---------RLETENVEKEGPVSFVASI-TAHAGIDQKT-LRFCYERLHSLMLTLEITDT 389
++ N + G F+ SI T + D T ++ +R ++ M+T
Sbjct: 470 FIEQYDTNLKIHNYNTKTCGVKQFLNSIKTKSSEFDTITDIQLDEDRSNNPMMT------ 523
Query: 390 DEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRF 449
I F + + I I P P + +++ + + +
Sbjct: 524 --------IISFLECLRSNCSDGRIFIIP----GPTVGQSIIKFLLLNPAAHFHDIIRDA 571
Query: 450 QSVVITSGTLSPIDLYPRLL------NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
++V++ GT++P++ + L + +V+ S + + I + T G +
Sbjct: 572 RAVILAGGTMAPMNEFIDQLFIAAGASSERIVTYSCDHVIPEENIVCSITTHGPTGIEFE 631
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
F R + + G+ L+ + +I+P GI+ F SY++ + + +SGI++++ K
Sbjct: 632 FNFQNRENTKLLDELGRTLLNLCNIIPAGIIVFLPSYNFEELMYKHLENSGIIRKLSLKK 691
Query: 564 LVFIETQDVVETTLALDNY----RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
+ E + + L Y + + G++ FSV GK++EG++F GR VI+
Sbjct: 692 HILREPKSASQVHEILKEYSLHIKSPKNSQNGSLLFSVVGGKLSEGLNFSDDLGRCVIVV 751
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
G+P+ S L +++YL + + G +F ++ QC+GR IR DY +I
Sbjct: 752 GMPYPNIQSLELQEKMKYLNENIKSDAGQNFYENSCMKAVNQCIGRAIRHINDYSTVILL 811
Query: 679 DKRYSRHDKRSKLPGWI 695
DKRYS K LP WI
Sbjct: 812 DKRYSY--KIKALPQWI 826
>gi|297462303|ref|XP_002702129.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein [Bos
taurus]
Length = 1232
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 166/671 (24%), Positives = 269/671 (40%), Gaps = 96/671 (14%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + EL+ +T + G IL SSR + CV+ V+ NR+
Sbjct: 244 KIYFGTRTHKQIAQITRELQ-----RTAYSGVPMTIL----SSRDHTCVHPEVMGNFNRN 294
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-----GVYTLQDLRAF 183
C + + N ++C F+ K + L + +++L +
Sbjct: 295 E---KCME---------LLDGKNGKSCYFYHGVHKMSDQHTLQTFQGMHKAWDIEELVSL 342
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G++ CPY+ AR ++Q A+++ Y YLLD ++ + + KE VV+ DEAHNI++
Sbjct: 343 GRKLKACPYYTARELMQNADIIFCPYNYLLDAQIRETMDINL-KEQVVILDEAHNIEDCA 401
Query: 244 IEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGR---------LRAEYNRLVE--- 290
E+ S SV L A L S IN I R K + R L A LVE
Sbjct: 402 RESASYSVTEVQLRFARDELDSMINYNI-RKKDHEPLRAVCCSLINWLEASSEHLVERNY 460
Query: 291 --------GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRR--LVQYLRG 340
G + NL ++ P IL+ HF VL+R V + G
Sbjct: 461 ESSCKVWSGSEMLLNLHKMGITTATFP--ILQG----------HFSAVLQREEKVPSIHG 508
Query: 341 RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
+ E +E PV I+A I K L + L D D + IQ
Sbjct: 509 KEEA----REIPV-----ISASTQIMLKGLFMVLDYL--FRQNSRFAD-DYKVAIQQTYS 556
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
+ T G I+ + VL C + ++A + + ++V+TSGTLS
Sbjct: 557 WINQSDTTDHGLLILSKNKKRLRQKAAVRVLNFWCLNPAVAFSDINGKVWAIVLTSGTLS 616
Query: 461 PIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGK 520
P+ + L + + + + G + F G
Sbjct: 617 PMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGA 676
Query: 521 LLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ--------DV 572
LL+ + + GI+CF SY ++++ W +G+ + K V +E Q ++
Sbjct: 677 LLLSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWYNLELVKTVIVEPQGGEKIDFDEL 736
Query: 573 VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QYT 626
++ Y+ D GA+ +V RGKV+EG+DF R V+ G+PF Q
Sbjct: 737 LQMYYDAIKYKGEKD---GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVE 793
Query: 627 LSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
L + + LR ++ + A R Q +GR IR K D+G +I D R+ +
Sbjct: 794 LKRQYNDQHSKLRGLLPGRQ--WYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNP 851
Query: 687 KR--SKLPGWI 695
R S L W+
Sbjct: 852 SRYISGLSKWV 862
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+ + V + FP YP Q + M + R L++K HCLLE PTG+GK++ALL ++ S
Sbjct: 7 YTIGGVKINFPC-KAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQS 65
Query: 63 KPENPV 68
PV
Sbjct: 66 LSGKPV 71
>gi|410907467|ref|XP_003967213.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Takifugu rubripes]
Length = 979
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 18/269 (6%)
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHP------VVSRSFKMSLTRDCICPMVLTRGSD 498
+ ++VVI GT+ P+ + + L F +V S + + I P+VL G
Sbjct: 682 ILKECRAVVIAGGTMQPVSDFKQELLFSAGVGEERIVEFSCGHVIPPENILPLVLCNGPS 741
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ F R P + G++L + ++VP G+VCFF SY Y+ I + W +G L
Sbjct: 742 GQELDFTFQNRDSPHMMDETGRILSNICNVVPGGVVCFFPSYEYLRRITSHWETNGTLAR 801
Query: 559 IMQHKLVFIETQDVVETTLALDNY-----RKACDCG--RGAVFFSVARGKVAEGIDFDRH 611
+ K +F E + L ++ R A D G GA+ FSV GK++EGI+F
Sbjct: 802 LANKKKIFHEPKKSNLVEQVLKDFSRCIQRCAADSGALTGALLFSVVGGKMSEGINFSDD 861
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD-----FLTFDALRQAAQCVGRVI 666
GR V+M G+P+ S L ++ YL G + ++ Q +GR I
Sbjct: 862 LGRCVVMVGMPYPNIKSPELQEKMSYLDKHLPHNGGKSPGQALIENLCMKAVNQSIGRAI 921
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R + DY M+ D+RYSR +KLP WI
Sbjct: 922 RHRGDYSSMVLCDRRYSRPATLAKLPAWI 950
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 45/238 (18%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E+ K+ YC+RT ++ + +H Q A I + L SR+NLC+N V
Sbjct: 293 EHITKIYYCSRTHSQL------AQFVHEVQKSPF--ANDISLVTLGSRQNLCINEEVRRL 344
Query: 125 ENRDSVDAACRKRTASWVRALAAEN-------PNIETCEFFENYEKAASAAVLPP----G 173
+ ++ C + + E+ P TC Y KA + +
Sbjct: 345 GSIQHINDRCMEMQKNKHEKQHQEDGAKRKRGPAKSTCP----YNKAPALQRMRDEILGA 400
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKEMQKESV 230
V ++ L G + CPY+ AR + A +VV YQ LL + AG+ K V
Sbjct: 401 VQDIEQLLKLGSETRSCPYYSARLTIPPAQLVVLPYQMLLHEATRRAAGV----QLKGQV 456
Query: 231 VVFDEAHNIDNV--CIEALSVSVRRQTLEGAT--RNLSRINQEIERFKATDAGRLRAE 284
V+ DEAHN+ + CI + L GA R S++ Q RFK+ RL+A+
Sbjct: 457 VIIDEAHNLSDTLSCIYSAE-------LTGAQLCRAHSQLTQYTHRFKS----RLKAK 503
>gi|222642047|gb|EEE70179.1| hypothetical protein OsJ_30256 [Oryza sativa Japonica Group]
Length = 1456
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 181/822 (22%), Positives = 318/822 (38%), Gaps = 170/822 (20%)
Query: 34 AKGHCLLEMPTGTGKTIALLSLITSYVLSKP----------------------------- 64
+ H LLE PTGTGK+++LL ++ P
Sbjct: 15 GRSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAAAPDPFLHGGGFVPDDTQKQATP 74
Query: 65 ---------ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
+N + Y TRT ++ + + E + +Y+ R +AI L+SRK+
Sbjct: 75 GVPEKATRKKNVPTIYYATRTHAQITQVVREYRKT-SYRVR--------MAI-LASRKHY 124
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG-- 173
CVN V + N +D C+ + + + + C ++N +K + L G
Sbjct: 125 CVNKNVCMSGN---IDELCK----------SLLDDSAQGCPEYKNAQKLSRHPSLQIGGC 171
Query: 174 --VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KE 228
V+ ++DL G++ CPYF A+ M + A +V Y YL+ P I+ + M +
Sbjct: 172 YEVHDIEDLVRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISP----IVRRAMDIDIRG 227
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA-GRLRAEYNR 287
S++V DEAHNI+++ +A S V ++ L + QE+E +A ++ +
Sbjct: 228 SIIVLDEAHNIEDIARDAGSFDVDEES-------LLFLRQELEGLVTDEAVAKIYEPLHE 280
Query: 288 LVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENV 347
+++GL N W+ GN + F H + G + +
Sbjct: 281 VIQGL-------NGWIDE------------QGNNLQKNEFEHP----ASFWTGEEAMKEL 317
Query: 348 EKEG--PVSF-------VASITAHAGIDQKTLRFCYER---LHSLMLTLEITDTDEFLHI 395
+ G PV+F +I A + + + + L SL +L + H
Sbjct: 318 KYAGITPVNFPVLQECATKAIKAASDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRHS 377
Query: 396 Q----TICDFATLVGTYTRGFSIIIEPFDERMPHIP-DPVLQLSCHDASLAVKPVFDRFQ 450
+ FA G + +II + I V+ L C + ++ + + D
Sbjct: 378 NDYQLALQRFAKREGANVMSYDLII--CNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTL 435
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC-ICPMVLTRGSDQLPVSTKFDMR 509
SV++TSGTLSP+ + L + D + VL+ G ++ +
Sbjct: 436 SVILTSGTLSPMGSFASELGVQFEACMEAPHVINADSQVFATVLSSGPTGRRLNASYRTA 495
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE- 568
++ G L E+ +VP G + FF SY+ ++++ W+ +G + K V +E
Sbjct: 496 NEYSFQDELGATLEEICRVVPGGALVFFPSYNLLEKLQRRWSQTGQWARLEAQKHVCVEP 555
Query: 569 ------------------------------TQDVVETTLALDNYRKACDCGRGAVFFSVA 598
+ +V+ + D+ +++ GA F +V
Sbjct: 556 RGSTEELEPVLKGYYNAILGKAPPKKGRGGAKQIVKNRVTKDSSQESAK--GGAAFLAVC 613
Query: 599 RGKVAEGIDFDRHYGRLVI-------MFGVPFQYTLSKILLARL---EYLRDTFQIKEGD 648
RGKV+EGIDF R+V+ +F P + ++ L + Y + +
Sbjct: 614 RGKVSEGIDFSDDKARVVVSFVFSSYVFYAPERINDVQVKLKKRYNDSYKSSKDLLSGNE 673
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST 708
+ A R Q GR IR K DYG +I D+RY + W+ + +R+ T
Sbjct: 674 WYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGTFQET 733
Query: 709 DMAL----HIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
L A E ++ AQ + L SQ D K+
Sbjct: 734 MDGLTRFFQNAEEQIKIKAQGVSPKDRLDACVLPSQGDKRKL 775
>gi|315230899|ref|YP_004071335.1| DNA repair Rad3-like helicase [Thermococcus barophilus MP]
gi|315183927|gb|ADT84112.1| DNA repair Rad3-like helicase [Thermococcus barophilus MP]
Length = 642
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 173/731 (23%), Positives = 311/731 (42%), Gaps = 112/731 (15%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY ++ P Q ++ + A+ + ++E PTG GKTI++L+ + Y LS K+
Sbjct: 4 YFPYKSLRPNQEEFISLVDEAVRKGENLIIEAPTGFGKTISVLAGVLPYALSMG---FKV 60
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN--RD 128
+Y RT +M++ + ELK + + P + + SRK LC++S + +N D
Sbjct: 61 VYLARTHKQMDRVIEELK-----EINKINPVS---GVEFRSRKELCLHSYI---QNFVPD 109
Query: 129 SVDA--ACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQ 186
+ +A C K + EN + EF E E ++ P + + +L
Sbjct: 110 AYNAMIVC-KNLKKLHKCDYFENVKKKKDEFSEIVEYFLNSPSQPIEILSYSNLLEL--- 165
Query: 187 QGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM---QKESVVVFDEAHNIDNVC 243
CPY + R + + ANV+V SY Y+L+P + + + ++ +V+FDEAHN+ N
Sbjct: 166 ---CPYEVTRKVGEKANVIVASYLYMLNPAIRNAFIESLGVDYEDLIVIFDEAHNLPNQA 222
Query: 244 IEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEYNRLVEGLALRGNLPNAW 302
I+ LS + ++ A + N+ EI F + L YN ++ +
Sbjct: 223 IDVLSDKITLNSITRAVKEAEEYNEHEIANFLSIFLKGLENLYNERLKDREVE------- 275
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVL----RRLVQYLRGRLETENVEKEGPVSFVAS 358
P LP I H +L R LV+ LR +E + +E +
Sbjct: 276 -EIPILPESIFS-----------HVFDILNISERLLVRILREIVEVGDAIREDKIEKNKP 323
Query: 359 ITAHAGIDQKTLRFCYERLHSLMLT-LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIE 417
++ G R+ +L L + +++L I + RGFS
Sbjct: 324 PRSYVG-----------RVGEFLLNWLSVIGREDYLFIMS----------KDRGFS---- 358
Query: 418 PFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
L+L D S A+ + D QS + SGTL+P++ + ++ +
Sbjct: 359 -------------LELVALDPSKALDFIND-IQSAIFMSGTLTPLEAFKDIMGIENAKLK 404
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
F + ++ +V VST+ + R + + R + +VE V ++P + F
Sbjct: 405 KFPRMVKKENALVLVAK------DVSTRGEER-NLELYRKMAEYIVEAVKLIPKNVGVFT 457
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACDCGRGAVFF 595
SY + +++ I +E+ K VFIE ++ E + + +++ G V
Sbjct: 458 ASYEVLQGLLSANVHLRIEEEV--GKKVFIEKKNASSKENDILVRAFKEEAK-REGGVLL 514
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF--D 653
V G+ +EG D+ V++ G+P+ ++ A++ Y F ++G + +
Sbjct: 515 GVMGGRNSEGQDYSGDEMNGVVLVGIPYARPTPRVQ-AQIRYFEKKFP-RKGRYYGYYLP 572
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALH 713
A R+ Q GRV RS + G +I D R R LP W+ ++ +L M L+
Sbjct: 573 AHRKLVQAAGRVHRSAEEKGAIIILDYRVLWSSIRKDLPDWMNETMKPVNL---PRMKLY 629
Query: 714 IAREFLRKMAQ 724
+ R F R + +
Sbjct: 630 L-RRFYRNLEE 639
>gi|297715610|ref|XP_002834155.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Pongo abelii]
Length = 1248
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 169/689 (24%), Positives = 280/689 (40%), Gaps = 82/689 (11%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + EL+ +T + G IL SSR + CV+ + NR+
Sbjct: 245 KIYFGTRTHKQIAQITRELR-----RTAYSGVPMTIL----SSRDHTCVHPEAVGNFNRN 295
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-----GVYTLQDLRAF 183
C + + N ++C F+ K + L + +++L +
Sbjct: 296 E---KCME---------LLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSL 343
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
GK+ CPY+ AR ++Q A+++ Y YLLD ++ + + KE VV+ DEAHNI++
Sbjct: 344 GKKIKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNL-KEQVVILDEAHNIEDCA 402
Query: 244 IEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGRLRAEYNRLVEGLALRG------ 296
E+ S SV L A L S +N I + D LRA L+ L
Sbjct: 403 RESASYSVTEVQLRFARDELDSMVNNNIRK---KDHEPLRAVCYSLINWLEANSEYLVER 459
Query: 297 ---NLPNAWLSNPALPS----DILKEAVPGNIRRAEHFLHVLRRLVQYL--RGRLETENV 347
+ W N L + I P I + HF VL++ + L G+ ET
Sbjct: 460 DYESACKIWSGNEMLLTLHKMGITTATFP--ILQG-HFSAVLQKEEKILPIYGKEET--- 513
Query: 348 EKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGT 407
+E PV I+A I L+ + L L D + IQ + +
Sbjct: 514 -REVPV-----ISASTQI---MLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQIDI 564
Query: 408 YTRGFSIIIEPFDERMPHIPDPV--LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY 465
+ +++ P +++ V L C + ++A + + Q++V+TSGTLSP+ +
Sbjct: 565 SDKN-GLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSF 623
Query: 466 PRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEM 525
L + + + + G + F G LL+ +
Sbjct: 624 SSELGVTFTIQLEANHVIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSV 683
Query: 526 VSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA--LDNYR 583
V GI+CF SY ++++ W +G+ + K V +E Q +T L Y
Sbjct: 684 CQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYY 743
Query: 584 KACDC---GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QYTLSKILLAR 634
A GA+ +V RGKV+EG+DF R VI G+PF Q L +
Sbjct: 744 DAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDH 803
Query: 635 LEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR--SKLP 692
LR ++ + A R Q +GR IR + D+G +I D R+ + R S L
Sbjct: 804 HSKLRGLLPGRQ--WYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPGRYISGLS 861
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFLRK 721
W+ ++ + + + AL EF +K
Sbjct: 862 KWVRQQIQH---HSTFESALESLAEFSKK 887
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
+ + V +YFPY YP Q + M + R L++K HCLLE PTG+GK++ALL
Sbjct: 8 YTIGGVKIYFPY-KAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALL 57
>gi|426238589|ref|XP_004013233.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Ovis aries]
Length = 1234
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 168/673 (24%), Positives = 271/673 (40%), Gaps = 99/673 (14%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + EL+ +T + G IL SSR + CV+ V+ NR+
Sbjct: 243 KIYFGTRTHKQIAQITRELQ-----RTAYSGVPMTIL----SSRDHSCVHPEVIGNFNRN 293
Query: 129 SVDAACRKRTASWVRALAA-ENPNIETCEFFENYEKAASAAVLPP-----GVYTLQDLRA 182
R + + N ++C F+ K + L + +++L +
Sbjct: 294 E-------------RCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMHKAWDIEELVS 340
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G++ CPY+ AR ++Q A+++ Y YLLD ++ + + KE VV+ DEAHNI++
Sbjct: 341 LGRKLKACPYYTARELMQDADIIFCPYNYLLDAQIRETMDINL-KEQVVILDEAHNIEDC 399
Query: 243 CIEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGR---------LRAEYNRLVE-- 290
E+ S SV L A L S IN I R K + R L A LVE
Sbjct: 400 ARESASYSVTEVQLRFARDELDSMINYNI-RKKDHEPLRAVCCSLINWLEASSEHLVERD 458
Query: 291 ---------GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRR--LVQYLR 339
G + NL ++ P IL+ HF VL+R V +
Sbjct: 459 YESSCKVWSGSEMLLNLHKMGITTATFP--ILQG----------HFSAVLQREEKVPSIH 506
Query: 340 GRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC 399
G+ E +E PV I+A I K L + L D D + IQ
Sbjct: 507 GKEEA----REIPV-----ISASTQIMLKGLFMVLDYL--FRQNSRFAD-DYKVAIQQTY 554
Query: 400 DFATLVGTYTRGFSIIIEPFDERMPHIPD-PVLQLSCHDASLAVKPVFDRFQSVVITSGT 458
+ T + +I+ +R VL C + ++A + + ++V+TSGT
Sbjct: 555 SWINQTDTTDKNGLLILSKNKKRSRQKAAVHVLNFWCLNPAVAFSDINGKVWTIVLTSGT 614
Query: 459 LSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNY 518
LSP+ + L + + + + G + F
Sbjct: 615 LSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEV 674
Query: 519 GKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ-------- 570
G LL+ + V GI+CF SY ++++ W +G+ + K V +E Q
Sbjct: 675 GALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKIDFD 734
Query: 571 DVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------Q 624
++++ Y+ D GA+ +V RGKV+EG+DF R V+ G+PF Q
Sbjct: 735 ELLQVYYDAIKYKGEKD---GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQ 791
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 684
L K + LR ++ + A R Q +GR IR K D+G +I D R+
Sbjct: 792 VELKKQYNDQHSKLRGLLPGRQ--WYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRS 849
Query: 685 HDKR--SKLPGWI 695
+ R S L W+
Sbjct: 850 NPSRYISGLSKWV 862
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+ + V + FP YP Q + M + R L++K HCLLE PTG+GK++ALL ++ S
Sbjct: 6 YTIGGVKINFPC-KAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQS 64
Query: 63 KPENPV 68
PV
Sbjct: 65 LSGKPV 70
>gi|195049134|ref|XP_001992658.1| GH24089 [Drosophila grimshawi]
gi|229891623|sp|B4JNS2.1|RTEL1_DROGR RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193893499|gb|EDV92365.1| GH24089 [Drosophila grimshawi]
Length = 986
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 12/279 (4%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRD 486
++ C + ++ + + +SV++TSGTL+P L P + V++ + +
Sbjct: 454 IINFWCFNPGFGMEQLLNTHVRSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVNEA 511
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ G D+ + + + R +P + G+ ++ + IVPDG++ FF SY +++
Sbjct: 512 QVYVKIIGTGPDREQLISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQC 571
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGI 606
+ W SG+ +I K +F+E + + T ++ + +A +GA F +V RGKV+EG+
Sbjct: 572 VDAWQASGLWADISSRKPIFLEPRGKDQFTSTMEEFYQAIRDSKGACFMAVCRGKVSEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQ 660
DF GR VI+ G+PF ++ + YL +T + +E L+ +A R Q
Sbjct: 632 DFADRNGRAVIITGLPFPPLKDPKVILKRRYL-ETNRTRENQLLSGNEWYNLEATRAVNQ 690
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GRVIR + DYG ++ D R+ + +L WI +HL
Sbjct: 691 AIGRVIRHRNDYGAILLCDARFQDASQVQQLSKWIRNHL 729
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 65/301 (21%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-------- 59
+ V+FP++ Y Q +YM ++ L + +LE PTGTGKT++LL +
Sbjct: 9 IPVHFPFEP-YDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGWIRTRQSEV 67
Query: 60 -------------------------------VLSKPEN--PVKLIYCTRTVHEMEKTLAE 86
V+ K N K+IY +RT ++ + + E
Sbjct: 68 QLNMQKLQHDQQTQLTGAAGAGAAMGSEIAAVIGKSNNWGVPKVIYASRTHSQLTQAMRE 127
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
LK +T + A + A+ L SR LC++ V+ + + C+ + +
Sbjct: 128 LK-----RTAY----ANMRAVVLGSRDQLCIHPDVMREQGNSNKVNMCKLKVHA------ 172
Query: 147 AENPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
++C F E K P + ++DL G++ CPYF ++ +V A++
Sbjct: 173 ------KSCTFQLRVESKKDHPDFRGPSIMDIEDLVKVGQRLKMCPYFASKELVNSADIT 226
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLDPK E+ ++V+ DE HNI+ +C E+ SV +R + A +++
Sbjct: 227 FMPYNYLLDPKARKANKIELSN-AIVILDEGHNIEKICEESASVQIRSSDVAIAIEDVTH 285
Query: 266 I 266
I
Sbjct: 286 I 286
>gi|393243158|gb|EJD50674.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 801
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 143/282 (50%), Gaps = 22/282 (7%)
Query: 445 VFDRFQSVVITSGTLSPIDLYPR-LLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQL 500
+ + ++VV+ GT+SPI ++ + LL F P + S + + R+ +C +VL++
Sbjct: 511 IINEARAVVLAGGTMSPISVFEQQLLPFLPPERLASFACGHVIPRENLCALVLSKSPQGT 570
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
++ ++ RSD + + G +L+ +V IVPDG+V FF SY+++ + + +SG+ +I
Sbjct: 571 SLTFNYEKRSDKTLMSDLGMVLLNLVRIVPDGMVVFFPSYAFLATVQSQLKESGLWDKIG 630
Query: 561 QHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
K +F E D L Y A G A+ +V K++EG++F R V++ G
Sbjct: 631 ARKPLFTEPNDGSSVEEVLREYGAAIASGASALLLAVVGAKLSEGLNFSDGLARAVVLVG 690
Query: 621 VPFQYTLSKILLARLEYLRDTF-QIKEG------DFLTFDALRQAAQCVGRVIRSKADYG 673
+P+ S L R+ ++R+ K G + +R Q VGR IR K D+
Sbjct: 691 LPYANLNSPELKERMRFVREAAGPTKPGARDAGMEMYENMCMRAVNQSVGRAIRHKGDWA 750
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
+IF D RY + R+KLPGWI S D+A+H A
Sbjct: 751 ALIFVDARYGSNRVRAKLPGWI-----------SADLAVHDA 781
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 53/256 (20%)
Query: 42 MPTGTGKTIALLSLITSYVLSKPENPV--KLIYCTRTVHEMEKTLAELKLLHNYQTRHLG 99
+P T L+ + ++ +PV K+ + +RT ++ + EL + + + +
Sbjct: 155 LPEDEPATSNSLAAWRARIVEDEPDPVCTKIYFASRTHTQLSQLRVELLKTPDGRMKRVV 214
Query: 100 PAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFE 159
P L+SRKNLC+N + R VD E C
Sbjct: 215 P--------LASRKNLCINDEL----KRSGVDID-------------------EGCRAML 243
Query: 160 NYEKAASAAVLPP----------------GVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+ +K LPP ++DL G++ CPYF +R V A
Sbjct: 244 SGDKGKRCPYLPPPDELSQMLDFRDHILASPKDIEDLVTLGQELRTCPYFGSRRAVASAQ 303
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+V Y LL ++ K VV+ DEAHN+ + + SV++ +TL +L
Sbjct: 304 IVTLPYNLLLQKSAREATGIDL-KGHVVIIDEAHNLIDTMLSIHSVALNLKTLR---ESL 359
Query: 264 SRINQEIERFKATDAG 279
S++N +FK AG
Sbjct: 360 SQLNIYHGKFKKRLAG 375
>gi|383850034|ref|XP_003700633.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Megachile rotundata]
Length = 861
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 152/678 (22%), Positives = 285/678 (42%), Gaps = 92/678 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAEN 126
K+ +C+RT ++ + + ELK P +K + + L+SR+N C+N V ++
Sbjct: 196 TKIFFCSRTHSQLSQFIRELKK---------SPYSKNVSVVPLASRQNYCINKNVRKLKH 246
Query: 127 RDSVDAAC---RKRTASWVRALAAENPNIET-CEFFENYEKAASAAVLPPGVYTLQDLRA 182
++ ++ C +K+ A+ + + T C F + L + ++++
Sbjct: 247 QNLINEQCLQLQKKKATVKDEKDVKRKKVATSCPFMPGNQDLLIGETLIE-IQDIEEIVQ 305
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G+ C Y+ AR V +++ Y +L K I S K ++++ DEAHN+
Sbjct: 306 KGEDYKTCAYYAARKAVPTGQLILVPYNSVLH-KNTRISSGINLKGNILIIDEAHNL--- 361
Query: 243 CIEALSVSVRRQTLEGATRNL----SRINQEIERFKATDAGRLRAEYNRLVEGLALRGNL 298
+EA+ R ++ RNL S+++Q ++RF+ + + N+L L+ L
Sbjct: 362 -LEAIE---RMHSVMITGRNLLHCHSQLSQYLKRFQTLFSAKNLLYLNQL--SFCLKKLL 415
Query: 299 PNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS 358
+ + P D + + E F ++ ++T N+ + +
Sbjct: 416 TIFGATTKSTPDDSISAETISKSYKIEEF---------EIKTEIDTINIFE------LLK 460
Query: 359 ITAHAGIDQKTLRFCYE---RLHSLMLTLEITDTDEFLH-IQTICDFATLVGTYTRGFSI 414
H+ + K F + ++ + + FLH I+T T T +
Sbjct: 461 FIKHSRLSHKLQSFVEQYDTKIKVCKPDEKTSGIKHFLHSIKTKSSECT-----TDTVAA 515
Query: 415 IIEPFDERMPHIPD----PVLQLSCHDASLAVKPVFDRFQSV------------------ 452
++E P + LQ C D + V P QS+
Sbjct: 516 VVEEEQSNNPLLLIISFLESLQNRCTDGRIFVIPGATLGQSIIKFFLLNPAAHFHDIVQD 575
Query: 453 ----VITSGTLSPIDLYPRLLNF------HPVVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
++ GT++P++ + L +V+ S + ++ I + T G +
Sbjct: 576 SRAVILAGGTMAPMNEFTEQLFIAAGAAPERIVTFSCDHVVPKENIICSIATHGPTGVEF 635
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+ R + + G+ L+ + +IVP GIV F SY++ + + SGI+ +I
Sbjct: 636 EFNYQNRQNIKLMDELGRALLNVCNIVPAGIVVFLPSYNFEELVYKHLEKSGIITKISAK 695
Query: 563 KLVFIETQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIM 618
K VF E + + L+ Y + R G++ FSV GK++EG++F + GR +I+
Sbjct: 696 KHVFREPKSTSQVNEILEQYAAHIEKPRSPQNGSLLFSVVGGKLSEGLNFSDNLGRCIIV 755
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAA-QCVGRVIRSKADYGMMIF 677
G+P+ S L +++YL + + G L ++ +A QC+GR IR DY +I
Sbjct: 756 VGMPYPNIKSPELQEKMKYLNENVKADAGQNLYENSCMKAVNQCIGRAIRHINDYSTVIL 815
Query: 678 ADKRYSRHDKRSKLPGWI 695
DKRYS +K LP WI
Sbjct: 816 LDKRYS--NKTKALPQWI 831
>gi|296417607|ref|XP_002838444.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634383|emb|CAZ82635.1| unnamed protein product [Tuber melanosporum]
Length = 807
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPR-LLNFHP---VVSRSFKMSL 483
D L+ D + + + + ++V++ GT+ P++ Y L + P + + S +
Sbjct: 499 DTCLRYMLLDPAHHFQEIVEEARAVILAGGTMEPMNDYTNHLFPYLPKEKIRTLSCGHVI 558
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
++ + + +T+G F+ R P + G+ +V + ++P G+VCFF SY+Y+
Sbjct: 559 PKENLTALPVTKGPGGREFEFTFEKRMQPAMIEELGRAIVNLCQVIPHGVVCFFPSYAYL 618
Query: 544 DEIIATWNDS----------GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAV 593
+ +++ W + + + K VF E+ D L Y +A D G+G +
Sbjct: 619 EFVVSQWRKKPTPASNTAAKSLWERLEDRKTVFRESSDGSSVEEVLREYAQAIDSGKGGL 678
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD 653
SV GK++EGI+F+ + GR +IM G+PF + + A+LE+ + +F
Sbjct: 679 LLSVVGGKMSEGINFNDNLGRGIIMVGLPFPNSNTAEWRAKLEHAE---KAAGREFYENA 735
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+R Q +GR IR + DY ++ D+RYS SKLP WI + L
Sbjct: 736 CMRAVNQSIGRAIRHREDYAVIALFDRRYSTDRIASKLPKWIQNGL 781
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA----KILAIGLSSRKNLCVNSRVLAAE 125
+ YC+RT ++ + + EL+ + + G + ++ + L SRKNLC+N +V
Sbjct: 164 IFYCSRTHSQLTQFINELRRVKFPPSSPGGEGSALEEEVKHLSLGSRKNLCINPKVTKLG 223
Query: 126 NRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP----PGVYTLQDLR 181
N +++ C R+ A+E CEF + + + ++DL
Sbjct: 224 NPTAINERC----LELQRSGASE---ASRCEFLPGRDDQVAVRDFRDHTLAKIRDIEDLA 276
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
+ G++ G CPY+ +R ++ + +V Y LL + + K +V+ DEAHN+ N
Sbjct: 277 SLGRKMGICPYYASRPTIKPSEIVTLPYPLLLQKSAREALDLSL-KGHIVIVDEAHNLIN 335
Query: 242 VCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGR 280
S++V L+ R+ S+++ + RFK G+
Sbjct: 336 AISSIYSITVSLAQLQ---RSKSQLDIYLARFKNRLKGK 371
>gi|409095652|ref|ZP_11215676.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus zilligii
AN1]
Length = 636
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 174/715 (24%), Positives = 296/715 (41%), Gaps = 117/715 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY+ + P Q ++ + A+ + ++E PTG GKTI++L+ + Y E K+
Sbjct: 3 YFPYETLRPHQREFIELVNEAVRRGSNLIIEAPTGFGKTISVLAGVLPYA---KEAGYKV 59
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + ELK + + + L SRK LC+++ L D+
Sbjct: 60 LYLARTHRQMDRVIEELK--------EINKKTPVSGVELRSRKELCLHN-YLVEYTSDAY 110
Query: 131 DA--ACRKRTASWVRALAAENPNIETCEFFENYEKAAS-----AAVLPPGVYTLQDLRAF 183
A C+ S C+F+EN +K A G ++ +
Sbjct: 111 TAMVVCKNLKKSG------------KCQFYENEKKKREEFEEVAKFFLSGPAHPVEILDY 158
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNID 240
+ CPY L R + + A+V+V SY Y++ P + + + + +V+FDEAHN+
Sbjct: 159 AETLELCPYDLTRKVAEKADVIVASYLYMISPGIREAFLEGLGLTYSDLIVIFDEAHNLP 218
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
+ I ALS S+ T ++R +E E ++ + + + + +E L
Sbjct: 219 DQAISALSDSISIHT-------VNRAIKEAEEYREHEIANFLSIFGKGLELLYSEKFSDR 271
Query: 301 AWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRG------RLETENVEK-EGPV 353
P P I A P N+ + RRL++ L G + + +EK + P
Sbjct: 272 EVTEVPLSPESIF--AHPMNVLGIDA-----RRLIKTLNGMVTVGDSIREDRIEKNQPPR 324
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
S++ + L+L + D++L L+G +G S
Sbjct: 325 SYIGRVGEF-----------------LLLWFSLIGRDDYLF---------LMGR-EKGLS 357
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
L+L D S A+ V D +S + SGTL+P++ + ++
Sbjct: 358 -----------------LELVALDPSKALTFVRD-VKSAIFMSGTLTPLEAFRDVMGIEN 399
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
+ + F + R+ +V VST+ + RS V R +VE V I+P +
Sbjct: 400 SMLKKFPRMVKRENALVLVAR------DVSTRGEERS-LQVYRRMVDYIVEAVKIIPKNV 452
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACDCGRG 591
F SY + +++ N L+E K VFIE Q E L + + KA G
Sbjct: 453 GVFTASYEVLQGLLSA-NLQVKLEE--TGKAVFIEKQGASSKENDLLVAQF-KAHSKTNG 508
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AV V G+ +EG D+ V++ G+P+ + A++ Y F K G +
Sbjct: 509 AVLLGVMGGRNSEGQDYSGDEMNGVVLVGLPYARPTPRT-EAQVRYFEAKFPGK-GRYYG 566
Query: 652 F--DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
+ A R+ Q GRV RS + G +I D R + R LP W+ ++ L
Sbjct: 567 YYLPAHRKLVQAAGRVHRSAEERGSIIILDYRALWENVRKDLPDWLAEDMKPVDL 621
>gi|412986103|emb|CCO17303.1| predicted protein [Bathycoccus prasinos]
Length = 1048
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 184/784 (23%), Positives = 320/784 (40%), Gaps = 158/784 (20%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV----LA 123
++I+C+RT ++ + ++ELK +TR + + ++SRK LCVN +V ++
Sbjct: 286 TRIIFCSRTHSQLSQCVSELK-----RTRF---RESVSSAAIASRKQLCVNPKVNNGLMS 337
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIET---------CEFFENYEKA----ASAAVL 170
A+ + RK +AS + + + C + + KA A A++
Sbjct: 338 AQRINETCLDLRKSSASTSASTTKDKEKKKKKKGEKKEKGCPYLVSRSKAMRALADRALV 397
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ-KES 229
P +++L + + C Y+ AR + A+++ Y LL P + E+ K +
Sbjct: 398 QP--LDIEELSSMATKTKSCAYYAARQASKNADIIFMPYASLLAPDTRDALGIELDPKNT 455
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKAT-DAGRLR------ 282
VV+FDEAHN+ + + S S+ R+ + R +S I I+RFK A LR
Sbjct: 456 VVIFDEAHNVADAVRSSSSASMTRRDV---NRAISMIENYIDRFKERLTADNLRVLKVLL 512
Query: 283 AEYNRLVEGLALRGNLPNAWLSNPALPS--DILKEAVPGNIRRAE--HFLHVLRRLVQYL 338
+ RLV L + + L S D L A ++ E FL + + Q +
Sbjct: 513 SVAKRLVSVLTMSSTEKEKKTNRKKLSSLNDFLFSAKLDDVNVFELVRFLKQTK-IAQKI 571
Query: 339 RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLM--LTLEITDTDEFLH-- 394
G E KE V +I G D + +E +++ + +E DTD L
Sbjct: 572 AGYGEYVEQIKENGVDAYGTI----GSDDRDWSGAWEGAKTVITDVRMETLDTDAGLEAR 627
Query: 395 ---------------IQTICDFATLVGTYTRGFSIIIEPF---DERMPHIPDPVLQLSCH 436
+ I +F +G+ +++E +E + +L +
Sbjct: 628 VVTTKKNQHSANVASVHAIANFIHALGSEDADGRVLVEKMYGTEEEESSVKFVLLDV--- 684
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPID-LYPRLLNFHP--VVSR---------------- 477
AS + + + ++ ++ GTL+P + L +L+ + ++S
Sbjct: 685 -ASRFREDIVKKCRATLLVGGTLAPFEELLTQLVGYKESGILSSNDADITSSSSPLSPLS 743
Query: 478 ------SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS------DPGVARNYGKLLVEM 525
S + + + P+ + +G P FD S + + + G+ ++ +
Sbjct: 744 PKPMLFSCDHVVDKSNVLPLAIAKG----PSGKTFDFTSKNLKLCENDLLDDLGRCVLNL 799
Query: 526 --VSIVPDGIVCFFVSYSYMDEIIATWN---------DSGILKEIMQH--KLVFIETQDV 572
V + G++ FF S+S MD W D+ + ++M+ K V E +D
Sbjct: 800 SKVCVKTGGVIVFFPSFSLMDRCFQRWQSNSNNANTADASSMLQMMRKVGKTVLKEPRDN 859
Query: 573 VETTLALDNYRKACD---------CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
+ L + AC GA+ V GK++EGI+F + GR+VI+ G+PF
Sbjct: 860 AQLERTLFQFSSACGGENPTYELASKTGAILLCVVNGKLSEGINFKDNLGRMVIVVGLPF 919
Query: 624 QYTLSKILLARLEYLRDTFQIKEGDFLT---------FDAL--RQAAQCVGRVIRSKADY 672
+ L AR+EYL D Q + + + ++AL R Q VGR IR K DY
Sbjct: 920 ANVKDEELSARMEYL-DIQQKQAANNSSSSLTAGRAYYEALCARGVNQSVGRAIRHKDDY 978
Query: 673 GMMIFADKRYSRHDKR---------------SKLPGWILSHLRDAHLNLSTDMALHIARE 717
MIF D+R+ DKR LPGWI L+ N + H+A+
Sbjct: 979 ATMIFLDQRWCEKDKRNTTTTTQNTALGKYQQTLPGWISRELKVVDGNFG-EAVRHVAQF 1037
Query: 718 FLRK 721
F K
Sbjct: 1038 FKAK 1041
>gi|390367138|ref|XP_792082.3| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Strongylocentrotus purpuratus]
Length = 792
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 134/275 (48%), Gaps = 20/275 (7%)
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLL----NFHP--VVSRSFKMSLTRDCICPMVLTRGSD 498
V +++++ GT+ P++ + L P ++ S + + + P+ L++G
Sbjct: 492 VVKEARAIIVAGGTMQPVEDFKHQLFVCTGVQPERILEFSCGHVIPPEHLLPISLSKGPT 551
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
L + + R P + G++LV + +IVP G+VCFF SY Y +I W G+L
Sbjct: 552 GLELDFTYQHRDLPQMMDEVGRILVNISNIVPGGVVCFFPSYDYEKQIYQYWESHGVLTR 611
Query: 559 IMQHKLVFIETQDVVETTLALDNY----RKACD-CG----RGAVFFSVARGKVAEGIDFD 609
+ K ++ E + + L Y KAC C GA+ F V GK++EGI+F
Sbjct: 612 LGHRKKIYREPRKANQVDQVLGQYSATIEKACSGCTLSGLNGAMLFCVVGGKMSEGINFS 671
Query: 610 RHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF-QI--KEGDFLTFDAL--RQAAQCVGR 664
+ GR ++M G+P+ S L +++YL QI + + +D L + Q +GR
Sbjct: 672 DNLGRCIVMVGLPYANIKSPELKEKMDYLNANMPQINGRSAGQVHYDNLCMKAVNQSIGR 731
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
IR K DY M+ D RY+R RSKLP WI L
Sbjct: 732 AIRHKGDYASMLLLDHRYTRPSIRSKLPAWISERL 766
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 44/230 (19%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q K++ +G SR+NLC+N V +
Sbjct: 99 TKIFYCSRTHSQLSQ------FVHEVQKSPYHDDVKVVTLG--SRQNLCINEAVKKLRSM 150
Query: 128 DSVDAAC----------------------RKRTASWVRALAAENPNIETCEFFENYEKAA 165
++ C RKR+ ++A C F + +
Sbjct: 151 TLINDRCLEMQSKKKPAAKKDDDSTTKPKRKRSKQSLKA----------CPHFSQGQLSL 200
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
+ V ++ L GK+ CPY+ R+ V A +VV Y LL +
Sbjct: 201 YKDRVAVEVMDMEQLGKVGKELKACPYYGTRYAVPNAQLVVLPYNILLHKSTRKACRINL 260
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKA 275
K ++V+ DEAHN+ SV V L R S+++Q +++FK+
Sbjct: 261 -KGNIVIIDEAHNLIETICNVHSVEVTGAQL---CRAHSQLSQYMQKFKS 306
>gi|195420017|ref|XP_002060746.1| GK24077 [Drosophila willistoni]
gi|194156831|gb|EDW71732.1| GK24077 [Drosophila willistoni]
Length = 297
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 134/258 (51%), Gaps = 11/258 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVSTKFD 507
+SV++TSGTL+P L P + V++ + + + + ++ G D+ + F
Sbjct: 10 RSVILTSGTLAP--LKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQFISSFK 67
Query: 508 MRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFI 567
R +P + G+ ++ + IVPDG++ FF SY +++ + W SG+ +I K +F+
Sbjct: 68 NRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQTSGLWADIAAKKPIFL 127
Query: 568 ETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
E + + T ++ + +A +GA F +V RGKV+EG+DF GR VI+ G+P+
Sbjct: 128 EPRGKDQFTTTMEEFYQAIRDSKGACFMAVCRGKVSEGLDFADRNGRAVIIAGLPYPPLK 187
Query: 628 SKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQCVGRVIRSKADYGMMIFADKR 681
++ + YL + + KE LT DA R +GRVIR + DYG ++ D R
Sbjct: 188 DPKVILKRRYL-EANRTKENQLLTGQEWYNLDATRAVNHAIGRVIRHRHDYGAILLCDSR 246
Query: 682 YSRHDKRSKLPGWILSHL 699
+ + + +L WI HL
Sbjct: 247 FQDNSQVQQLSKWIRGHL 264
>gi|194912339|ref|XP_001982483.1| GG12711 [Drosophila erecta]
gi|190648159|gb|EDV45452.1| GG12711 [Drosophila erecta]
Length = 859
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 12/267 (4%)
Query: 445 VFDRFQSVVITSGTLSPID-----LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQ 499
+ + +++VI GT+ P L+ R + +V R + + D + P V++ G
Sbjct: 577 IVEEARAIVIAGGTMQPTQELKEQLFTRCQDR--LVERFYDHVVEDDAVLPFVISNGPSG 634
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
P+S KF R+ + + LL + +VP G+VCF SY Y+D++ SG L+ I
Sbjct: 635 APLSFKFAHRASAEMLQELSMLLRNLCQVVPGGVVCFLPSYEYLDKVYKYLEQSGTLETI 694
Query: 560 MQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
K VF E E LDNY A GA+ SV GK++EG++F GR V+
Sbjct: 695 QCRKSVFREVSGSAEQL--LDNYALAIKKPASGGALLLSVVGGKLSEGLNFADDLGRAVL 752
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMI 676
+ G+P+ S L R++YL G ++ ++ QC+GR +R DY +
Sbjct: 753 VVGLPYSNRQSPELGQRMQYLDAKLGPGAGNEYYENLCVKAVNQCIGRAVRHIKDYACVY 812
Query: 677 FADKRYSRHDKRSKLPGWILSHLRDAH 703
DKR+S R KLP WI H+ +++
Sbjct: 813 LVDKRFSDPKIRGKLPKWISRHIVESN 839
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV----- 121
PV++ +C+RT ++ + +AEL+ + Q+ + + L SR+ LC N +V
Sbjct: 187 PVQIFFCSRTHSQLAQIVAELRKTPHGQS--------VRCVSLGSRQQLCGNPQVRRLKH 238
Query: 122 LAAENRDSVDAACRKR-----TASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+ N +D A +K S + A A + E+ A + L
Sbjct: 239 VGLMNERCLDMATKKSRPNPSKKSRLTAEANSRCPFKAAPLVESLRDLALSEPL-----D 293
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
+++L G G C Y+ +R V+ A +++ YQ LL + + K S+V+ DEA
Sbjct: 294 IEELANEGAACGGCSYYASRSAVEHAQLILLPYQLLLQKSARNQLGISL-KGSIVIVDEA 352
Query: 237 HNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQEI 270
HN+ + + + RQ LE A T+NL +INQ I
Sbjct: 353 HNLLDSVAQLHGSEINRQQLERAKVQISCYKEHFQKRFNTKNLLKINQII 402
>gi|253742830|gb|EES99497.1| TFIIH basal transcription factor complex helicase subunit [Giardia
intestinalis ATCC 50581]
Length = 1060
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 28/320 (8%)
Query: 410 RGFSIIIEPFDER--------MPHIPDPVLQLSCHDASLAVKPVF--DRFQSVVITSGTL 459
RG S + F E+ +P + L C +K + +R +SV++TSGTL
Sbjct: 582 RGMSEFLNNFIEKRSADAASALPSQTGWQVHLLCMTPQSILKTIIMGERVRSVILTSGTL 641
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLTRGSDQLPVSTKFDMRSDPG 513
+P L F +S++ I P V+T G+ P+ + R
Sbjct: 642 APFSALQAELGL------PFGVSISCPHIVPSSNYLFRVIT-GTTGAPLLGTYTHRESGS 694
Query: 514 VARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ-----HKLVFIE 568
R G L V V G + FF SY YM +++ +W G + + +F+E
Sbjct: 695 YQRLLGYALQVCVRGVIGGTLVFFSSYKYMAQVLDSWKTDGTEAALRSGAHGDSRDLFVE 754
Query: 569 TQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+ + + Y+ +C+ G + F V RGK+AEGIDF +Y R ++ +P+
Sbjct: 755 PVRQQDCDIVVKKYKDSCNAGGCPILFVVCRGKLAEGIDFSNNYCRCALVISLPYPNISD 814
Query: 629 KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+L A++++L +K GD+ + A R Q +GRV+R K DYG M D+RYS R
Sbjct: 815 PLLKAKMDWLDKHSALKGGDWYSVHAYRSVNQALGRVLRHKDDYGCMFLLDQRYSTEASR 874
Query: 689 SKLPGWILSHLRDAHLNLST 708
+L GW+ HL L+ S+
Sbjct: 875 KQLSGWLADHLVSVELSESS 894
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 59 YVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-----LSSRK 113
+V+ +P P K++Y RT ++E+ + +LK + + PA ++ L SR+
Sbjct: 138 WVVEQP--PPKILYAARTHAQIEQAIKQLK--KHVEVISSVPADTNSSLSWPIAMLGSRR 193
Query: 114 NLCVNSRV--LAAENRDSVDAACRKRTAS-WVRALAAENPNIETCEFFENYEKAASAAVL 170
C+N R AA ++D AC+K R E + + Y S L
Sbjct: 194 VFCINERTHTYAAAANITLDMACKKVCDDRQCRYYFGEGDGEAVAQKYRQYYYEGSNERL 253
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
L+D + K + CPY+L R +V A ++ Y Y+L K +M S+
Sbjct: 254 D----DLEDFLGYCKNESRCPYYLGRALVPQAKIITTPYNYILSSKSRTAELCDMLNNSI 309
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVE 290
++ DE HNI C + S S+ TL AT + R Q+I + G A
Sbjct: 310 LLIDEGHNIGQACCDVFSSSIAVNTLLEATNEI-RYLQKIVTTQRLGPGDKAAT------ 362
Query: 291 GLALRGNLPNAWLSNP 306
+ L GN W S P
Sbjct: 363 -IELEGN----WFSKP 373
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
+++ V FP++ YP Q YM L AL+ K + LLE PTGTGKT++LL
Sbjct: 5 LRIKGVEFQFPFEP-YPSQIEYMNSLITALNGKENALLESPTGTGKTLSLL 54
>gi|345805276|ref|XP_852649.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Canis lupus familiaris]
Length = 1247
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 172/698 (24%), Positives = 283/698 (40%), Gaps = 100/698 (14%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + EL+ +T + G IL SSR + CV+ V+ NR+
Sbjct: 244 KIYFGTRTHKQIAQITRELR-----RTAYSGVPMTIL----SSRDHTCVHPEVVGNFNRN 294
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-----GVYTLQDLRAF 183
C + + N ++C F+ K ++ L + +++L +
Sbjct: 295 E---KCME---------LLDGKNGKSCYFYHGVHKISNQHTLQTLQGMCKAWDIEELVSL 342
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
GK+ CPY+ AR +++ A+++ Y YLLD ++ + + KE VV+ DEAHNI++
Sbjct: 343 GKKLKACPYYTARELIEDAHIIFCPYNYLLDAQIRESMDINL-KEQVVILDEAHNIEDCA 401
Query: 244 IEALSVSVRRQTLEGATRNL-SRINQEIERFKATDAGR---------LRAEYNRLVE--- 290
E+ S SV L A L S +N I R K + R L A LVE
Sbjct: 402 RESASYSVTEVQLRFARDELDSMVNNNI-RKKNHEPLRAVCYSLINWLEANSEHLVERDY 460
Query: 291 --------GLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYL--RG 340
G + NL ++ P IL+ HF VL++ + L G
Sbjct: 461 ESSCKIWSGSEMVLNLHKMGITTATFP--ILQG----------HFSAVLQKEEKVLPIHG 508
Query: 341 RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD 400
+ ET +E P+ I+A I K L ++ L D D + IQ
Sbjct: 509 KEET----REVPI-----ISASTQIMLKGLFMVFDYL--FRQNSRFAD-DYKVAIQQTYS 556
Query: 401 FATLVGTYTR-GFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTL 459
+ T + GF + VL C + ++A + + ++V+TSGTL
Sbjct: 557 WINQTDTSDKNGFFAPAKNKKHLRQKTAVHVLNFWCLNPAVAFSDINGKVLTIVLTSGTL 616
Query: 460 SPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
SP+ + L + + + + G + F G
Sbjct: 617 SPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVG 676
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ--------D 571
LL+ + V GI+CF SY ++++ W +G+ + K V +E Q +
Sbjct: 677 ALLLSVCQTVNQGILCFLPSYKLLEKLKERWLYTGLWHNLELVKTVIVEPQGGEKTDFNE 736
Query: 572 VVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF------QY 625
+++ Y+ D GA+ +V RGKV+EG+DF R VI G+PF Q
Sbjct: 737 LLQVYYDAIKYKGEKD---GALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQV 793
Query: 626 TLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
L + + LR ++ + A R Q +GR IR K D+G +I D R+ +
Sbjct: 794 ELKRQYNDQHSKLRGLLPGRQ--WYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSN 851
Query: 686 DKR--SKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
R S L WI ++ + + + AL +F RK
Sbjct: 852 PSRYISGLSKWIRQQIQH---HSTFESALESLSDFSRK 886
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
+ + V + FPY YP Q + M + R L++K HCLLE PTG+GK++ALL
Sbjct: 8 YTIGGVKITFPY-KAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALL 57
>gi|350584454|ref|XP_003126634.3| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Sus scrofa]
Length = 693
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 396 VVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGPA 455
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W+ SG+L
Sbjct: 456 NQQLEFTYQKRELPQMMDETGRILCNLCNVVPGGVVCFFPSYEYQRQVHAHWDRSGLLAR 515
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y + CG+ GA+ SV GK++EGI+F
Sbjct: 516 LAVRKKIFQEPKRANQVEQVLKEYSRCIKHCGQAEGMVTGALLLSVVGGKMSEGINFSDS 575
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T G AL + Q +GR
Sbjct: 576 LGRCVVMVGMPYPNIRSAELQEKMAYLDQTLPRAPGQAAPGKALVENLCMKAVNQSIGRA 635
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R +KLP WI
Sbjct: 636 IRHQKDFASIVLLDQRYARPPILAKLPAWI 665
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAE 125
+ V++ YC+RT ++ + +H Q G +++++G SR+NLCVN V
Sbjct: 11 DSVQIYYCSRTHSQLAQ------FVHEVQRSPFGKDTRLVSLG--SRQNLCVNDDVRKLG 62
Query: 126 NRDSVDAAC---------RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+ ++ C +K A + + C F+ + + G
Sbjct: 63 SVQLINDRCVDMQRSRRGKKSIAEEAKPRRRKQEQRTACPFYSHERLQLLRDEVLVGAKD 122
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++ L A GK+ CPY+ +R + A +VV YQ +L +Q + VV+ DEA
Sbjct: 123 IEQLVALGKEARACPYYGSRFAIPAAQLVVLPYQMVLHAATRQAAGIRLQGQ-VVLVDEA 181
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
HN+ + SV V L A S++ Q +ER+
Sbjct: 182 HNLMDTITGIHSVEVSGSQLCQAH---SQLLQYMERY 215
>gi|395324700|gb|EJF57135.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 879
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 157/631 (24%), Positives = 263/631 (41%), Gaps = 80/631 (12%)
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
A+ L SRK LC+N R+ E +D ACR+ + P++E +
Sbjct: 262 AVSLGSRKQLCINERL--KERAGDLDEACRQMLGEKGKKRCPHLPSVEEEARMLDLRDQI 319
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
A ++DL G+ CPYF +R + A +V+ Y LL + ++
Sbjct: 320 LATP-----KDIEDLYQIGQAADTCPYFGSRRAIPKAQLVLLPYNLLLQKTAREALGIDL 374
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL----SRINQEIERFKATDAGRL 281
+ VV+ DEAHN+ + + + + +TL A L SR + A RL
Sbjct: 375 T-DQVVIIDEAHNLTSTLLSLSATRLPLRTLSAARHQLSIYLSRFRNRLSTVHALHLKRL 433
Query: 282 RAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFL---HVLRRLVQYL 338
++EGL+ W A P++ K V G + ++ RL +
Sbjct: 434 ----TNVLEGLS---KYAEDWREAQAKPAEDGK--VKGRAGPEVEVITSGELMTRLGRKA 484
Query: 339 RG--RLETENVEKEGPVS------FVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
G LE E +E ++ V + AG Q T++ L + +T
Sbjct: 485 EGVNLLEIEKYLRESKIARKISGYSVKELEKAAG--QDTVK--------LAKLARLANTT 534
Query: 391 EFLHIQTICDF-ATLVGTYTRG---FSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVF 446
LH + F L + G FS++ + + H+ +P + V
Sbjct: 535 PPLH--AVESFIVALTASSDDGRVTFSLVDGSVEIKYQHL-NPATHF---------QEVV 582
Query: 447 DRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPV 502
D +SVV+ GT+SP+ D+ +L + P + + S + + +VL +G +
Sbjct: 583 DAARSVVLAGGTMSPMSDVVNQLFSSLPSERLTTFSCGHIIPTSNLQTLVLKKGPRGGEL 642
Query: 503 STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQH 562
+ KF R D + G++L+ ++VP G+V F SY +++ I W SG+L+++
Sbjct: 643 TFKFQQRGDDSLIAELGQILLNFTNVVPGGMVVFVPSYGFLNVITERWKASGMLEKLSAK 702
Query: 563 KLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
K VF E Q+ + L +Y RGA+ F+V K++EG++F R VI+ G
Sbjct: 703 KKVFSEPQESKQVEAVLRDYAAEIKDSSRRGALLFAVVGAKLSEGLNFTDDLARAVIIVG 762
Query: 621 VPFQYTLSKILLARLEYLR--DTFQIKEG-----DFLTFDA---------LRQAAQCVGR 664
+PF S L R+ Y+ + Q+ G T DA + Q +GR
Sbjct: 763 LPFANLGSPELRERMNYVTRLEQRQLASGARKAKTSSTKDAGTELYENMCMNAVNQSIGR 822
Query: 665 VIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D RY+ R KLP W+
Sbjct: 823 AIRHRGDWAALVLVDCRYASPRIRGKLPKWL 853
>gi|255574578|ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
gi|223532412|gb|EEF34207.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
Length = 1049
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%)
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
S+++TSGTLSP+D + + L + ++ I V+ G ++ + R
Sbjct: 437 SIILTSGTLSPMDSFAQELKLDFPIRLENPHVISSKQIWAGVVPVGPSGRSFNSSYRNRD 496
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND------SGILKEIMQHKL 564
+ G +V IVPDG++ FF SY +D+ I W + + I + I +HK
Sbjct: 497 SLEYKQELGNAIVNFARIVPDGLLVFFPSYYLLDQCIGCWKNVTHASSTTIWERICKHKQ 556
Query: 565 VFIETQDVVETTLALDNY-RKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
+E + LA+++Y K D GAVFF+V RGKV+EG+DF H GR V++ G+P
Sbjct: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHTGRAVMIIGMP 616
Query: 623 FQYTLSKILLARLEYL-------RDTF--QIKEGD-FLTFDALRQAAQCVGRVIRSKADY 672
F + + E+L RD + Q+ G+ + T A R Q VGRVIR + DY
Sbjct: 617 FPSRNDPKVRLKREFLDEQLCLQRDAYKSQLLTGESWYTQQASRAVNQAVGRVIRHRHDY 676
Query: 673 GMMIFADKRYSRHDKRSKLPGWILSHLR 700
G +IF D+R++ + +S++ WI H++
Sbjct: 677 GAIIFCDERFAHSNSQSQISLWIQPHIK 704
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 55/277 (19%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+K+ + V FPY+ Y Q YM ++ ++L ++ + LLE PTGTGKT+ LL ++ S
Sbjct: 4 YKIRGIDVDFPYE-AYDCQLVYMEKVIQSLQSRCNALLESPTGTGKTLCLLCATLAWRKS 62
Query: 63 ----------------------KPENPVK------LIYCTRTVHEMEKTLAELKLLHNYQ 94
P +P + ++Y +RT ++ + + ELK +Y+
Sbjct: 63 LGPFTTGKIERNGRTAGSKSDDTPPSPSEGTALPTIVYTSRTHSQLRQVVQELKR-SSYR 121
Query: 95 TRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAENPN 151
+ + L SR+ LC++ V + +A C++R A
Sbjct: 122 PK---------MVILGSREQLCIHDEVSLLRGKAQTNACHYVCKRREKRQCTHFA----- 167
Query: 152 IETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQY 211
++ V ++DL G++ G CPY+++R + + +++ Y Y
Sbjct: 168 -RVSDYVRKNPHLGDEPV------DIEDLVKMGRRFGPCPYYVSRELHKVVDILFAPYNY 220
Query: 212 LLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
L+D + + K S+++FDEAHN++++C +A S
Sbjct: 221 LIDRSYRKSLKIDWDK-SILIFDEAHNLESLCADAAS 256
>gi|397614354|gb|EJK62748.1| hypothetical protein THAOC_16627, partial [Thalassiosira oceanica]
Length = 1353
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 191/863 (22%), Positives = 320/863 (37%), Gaps = 209/863 (24%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
+ + ++FP+ Y Q+ YM + AL A H LLE PTGTGKT+ LL
Sbjct: 45 INGIDIHFPF-QPYNVQHQYMSSVITALQASQHALLESPTGTGKTLCLLCSALAWQIREK 103
Query: 54 --------------------------------SLITSYVLSKPENPVKLIYCTRTVHEME 81
+++ + + + PV +IY +RT ++
Sbjct: 104 SRMSVELEGIQSQQEGKTDELAPGPDQSQDGSDEFSNHSVPRKKAPV-IIYASRTHSQLS 162
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + EL+ TR+ P IL SR++ C++ +V + +T++
Sbjct: 163 QVMGELR-----NTRYR-PKHSILG----SREHSCIHPKVNPIVAKGKGSPGVEPKTSTE 212
Query: 142 VRALAAENPNIETCEFFENYEKA--ASAAVLPPGVY-------------TLQDLRAFGKQ 186
V ++ C F N E A S LPP V ++DL A GKQ
Sbjct: 213 VNNGCSKLCKERKCMFRNNLEDAQGKSGVWLPPTVQRADENKSFEQPVLDIEDLVALGKQ 272
Query: 187 QGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ-KESVVVFDEAHNIDNVCIE 245
CP++ +R ++ A +++ Y YL D E+ +V++FDEAHN++ E
Sbjct: 273 HKICPFYHSRSHLKEAELILVPYNYLFDRDARETTLAEVDFSNAVLIFDEAHNLEEFASE 332
Query: 246 ALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSN 305
+ S + + G ++R Q +E T R E L L+ L N
Sbjct: 333 SSSFDLSSADIAGCISEVTRGVQLLEMNPETGDERCNKE-----NLLRLKSMLIN----- 382
Query: 306 PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHA-- 363
F L + + G+ + + E P F+ I
Sbjct: 383 ---------------------FESYLIEGISHRPGQKLSADAESSQPGEFIFDIFKEGLR 421
Query: 364 --GIDQKTLRFCYERLHSLMLTLEITDTD---EFLHIQTICDFATLVGTY------TRGF 412
G ++ L +RL ++L + T+T + H + A GT+ ++ +
Sbjct: 422 VNGENKTLLIDLIQRLSDVVLEFKGTNTSGTPKLDHFVSCVKRAFGKGTFLLALARSKSY 481
Query: 413 SIIIEPFDERMPHIPDPVLQLSCHDASLAVKPV-FDRFQSVVITSGTLSPIDLYPRLLNF 471
+ I + + C SLA++ + F +S++ITSGTLSP+ + L
Sbjct: 482 RVHISKVNRGGGFDTGRTISFWCFAPSLAMRELTFLNVRSILITSGTLSPLPSFSMELGL 541
Query: 472 HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD 531
V + D I VL +G +S+K+ R DP + G L + +P
Sbjct: 542 DFPVQLENDHVIKPDQIFVRVLGKGVSGKELSSKYGRRDDPEYIKELGDTLASLAGNIPA 601
Query: 532 GIVCFFVSYSYMDEIIATW-------NDSG------------------------------ 554
G++ FF SY M I W N SG
Sbjct: 602 GVLVFFTSYGAMQTAIGRWGGPASGSNQSGGGRGASSFFAARRKKQAATPRYAFPQTNQH 661
Query: 555 -------ILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFF-------SVA 598
+ ++ K + IE + + + A+ Y+K A GA+ S+
Sbjct: 662 FAGPTNNTWQRLLSKKAIVIEPRSTSDLSDAIGEYKKFIALPKSNGAIMMGARFRKESIL 721
Query: 599 RG------KVAEGID-------FDRHYGRLVIMFGVPFQ-YTLSKILLAR--LEYLRDTF 642
R + A GID + R V++ G+PF Y K+ L R L+ R +
Sbjct: 722 RVSAQVSLRAAIGIDAVQFLITYPDDMARAVVVTGLPFAPYLDPKVKLKREFLDAARASA 781
Query: 643 QIK---EGDFLTFD---------------------ALRQAAQCVGRVIRSKADYGMMIFA 678
+ + +G F + D A R Q +GRVIR + DYG ++
Sbjct: 782 KSRPSTDGGFGSGDIKSLPRAPPKSLGGQEWYSQQAHRAVNQALGRVIRHRHDYGAVLLL 841
Query: 679 DKRYSRHDKRSKLPGWILSHLRD 701
D R++ + L W+ HL++
Sbjct: 842 DYRFAEPGNTNGLSKWLKPHLKN 864
>gi|345792101|ref|XP_543872.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Canis
lupus familiaris]
Length = 905
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+++ G
Sbjct: 608 VVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPDNILPLIICSGPS 667
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W+ SG+L
Sbjct: 668 SQQLEFTYQKRELPQMMDETGRILCNLCTVVPGGVVCFFPSYEYQRQVYAHWDKSGLLAR 727
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y + CG+ GA+ SV GK++EGI+F
Sbjct: 728 LAVRKKIFQEPKRANQVEQVLMEYSRCIKCCGQAGGTVTGALLLSVVGGKMSEGINFSDD 787
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T Q G L + ++ Q +GR
Sbjct: 788 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRVPGQPPPGKALVENLCMKAVNQSIGRA 847
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D+RY+R KLP WI RD + + A R+F R+ +
Sbjct: 848 IRHQKDFASIVLLDQRYARPPILEKLPAWI----RDRVEVRATFGPAFATMRKFHREKSV 903
Query: 725 P 725
P
Sbjct: 904 P 904
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V +
Sbjct: 227 TKIYYCSRTHSQLAQ------FVHEVQRSPFGKDTRLVSLG--SRQNLCVNEDVKTLGSV 278
Query: 128 DSVDAACR--KRTASWVRALAAENP------NIETCEFFENYEKAA--SAAVLPPGVYTL 177
++ C +R+ RA E P + C F+ NYE+ VL GV +
Sbjct: 279 QLINDRCMEMQRSKHENRA-EEEKPKRRRQEHQAACPFY-NYEQLQLLRDQVLV-GVKDI 335
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+ L A GK+ CPY+ +R + A +VV YQ LL +Q + VVV DEAH
Sbjct: 336 EQLVALGKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQ-VVVIDEAH 394
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
N+ + SV V L A S++ Q +ER+ RL+A+
Sbjct: 395 NLIDTITGIHSVEVSGSQLCQAH---SQLLQYMERY----GKRLKAK 434
>gi|91081131|ref|XP_975541.1| PREDICTED: similar to regulator of telomere elongation helicase 1
rtel1 [Tribolium castaneum]
Length = 861
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 158/671 (23%), Positives = 281/671 (41%), Gaps = 84/671 (12%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAE 125
P K+ C+RT ++ + + E+ P K I L+SR+N C+N V +
Sbjct: 173 PTKIFICSRTHSQLSQFIGEI---------LKSPFGKNIRVASLASRQNYCINPNVNKLK 223
Query: 126 NRDSVDAAC---RKRTASWVRA----LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
N ++ C +K++ S A + C +++ + V ++
Sbjct: 224 NNSLINEKCLDMQKQSKSQKDADGKTIKKPRGTTTKCPYYKQSTIEDLKDLTLTEVQDVE 283
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DL GK+ CPY+ +R + A VV+ Y +L ++ K++V++ DEAHN
Sbjct: 284 DLVKSGKELNACPYYSSRLAAEDAEVVLVPYNTILHKATREANGIDL-KDNVIIIDEAHN 342
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQ---EIERFKATDAGRLRAEYNRLVEGLALR 295
+ +EA+ + + S+I+Q +++ +K R A L+ L
Sbjct: 343 L----LEAMG------QMYSSELTYSQIDQGLLQVKCYKQRFNTRFSAPNLLLINQLIFV 392
Query: 296 -GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR-GRLET--------- 344
L N +D+ + + A+ + RLV++ + GR+
Sbjct: 393 ITKLQQLLDQNSEEKTDVF--TIENFVLTAKIDNFNMFRLVKFCKDGRIAQKVRSYALKY 450
Query: 345 -------ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
E K+G F++SIT +T+ E+ + LT + FL
Sbjct: 451 PFDKSIIEKPAKKGVKDFLSSITNK----NETVEQNIEKPAAFALTNPLLAIISFLE--- 503
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
TL +Y G + D+ LQ + + + + +SV++ G
Sbjct: 504 -----TLTYSYKDGRIFVHTNQDKSKIK-----LQFLLLNPTQNFEDIVKLARSVIVCGG 553
Query: 458 TLSPIDLYPRLLNFHPVVS--RSFKMS----LTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P + + L VS R F+ S + + I P+++T G+++ + F+ R
Sbjct: 554 TMKPNEEFRNRLFISSGVSPERIFEFSCGHIIPPENILPVIMTEGANKEKLLFNFERRMS 613
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD 571
G ++LVE+ +V GIV FF SY+Y + + W +K++ +LVF E QD
Sbjct: 614 MGGC--IKRILVEVCKVVKGGIVVFFPSYNYENWV---WQQ---IKDVSFGRLVFREPQD 665
Query: 572 VVETTLALDNYRKAC-DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
L +Y A GA+ SV GK++EG++F GR VI+ G+P+ +
Sbjct: 666 SGSVDSVLKSYSDAVHKSNSGALLLSVVGGKLSEGLNFSDDLGRCVIVVGLPYANITAPD 725
Query: 631 LLARLEYLRDTFQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS 689
L ++ +L G F ++ Q +GR +R K DY ++ D+RY+R +
Sbjct: 726 LKEKMSHLDKIEGSGAGKRFYESLCMKAVNQSIGRAVRHKNDYATILLLDERYNRTATKE 785
Query: 690 KLPGWILSHLR 700
LP WI L+
Sbjct: 786 ALPDWIKKSLK 796
>gi|242399192|ref|YP_002994616.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sibiricus
MM 739]
gi|242265585|gb|ACS90267.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sibiricus
MM 739]
Length = 643
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 159/709 (22%), Positives = 295/709 (41%), Gaps = 105/709 (14%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY ++ P Q ++ + + + ++E PTG GKTI++L+ Y E K+
Sbjct: 4 YFPYQSLRPNQEDFIKLVDTVVRNGENLVIEAPTGFGKTISVLAGALPYA---KEMGYKI 60
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
IY RT +M++ + ELK + N ++ + SRK LC++ V +
Sbjct: 61 IYLARTHKQMDRVIEELKAISN--------KTQVSGVEFRSRKELCLHQYV----QNFAP 108
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFEN-------YEKAASAAVLPPGVYTLQDLRAF 183
DA ++ L CEFFEN +++ A V P + +
Sbjct: 109 DAYNAMIVCKNLKKLG-------KCEFFENLKKKKEEFDELAQYFVQKPAEPMM--ILTH 159
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNID 240
K +CPY L R + ++V+V SY Y++DP + + +V+FDEAHN+
Sbjct: 160 SKMLDFCPYELTRKIAFNSDVIVASYLYMIDPAIRENFMAYFDFDYSDLIVIFDEAHNLP 219
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
N I ALS + + +++R +E + +K + + + + +E L + L +
Sbjct: 220 NQAINALSDRL-------SVYSINRAIKEADEYKEHEIANFLSIFLKGLENL-YQEKLRD 271
Query: 301 AWLSN-PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI 359
+ P +P I + + +L ++V+ E + P S+V +
Sbjct: 272 LKIDEVPIIPESIFYHVFDVLKINEKQLIRILDQMVKAGDAIREDKIERSLPPRSYVGRV 331
Query: 360 TAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPF 419
L+L + +++L + + +GFS
Sbjct: 332 GEF-----------------LLLWFALIGKEDYLFLM----------SREKGFS------ 358
Query: 420 DERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSF 479
L+L D S A+ V QS + SGT++P++ + ++ + +
Sbjct: 359 -----------LELVALDPSKALSFV-KNVQSAIFMSGTMTPLEAFADIMGIEGKLKKFP 406
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
++ + I + VST+ D RS + + K +VE V ++P + F S
Sbjct: 407 RIVKKENAIVLVAKD-------VSTRGDERS-LELYKKMAKYIVEAVKLIPKNVGVFTAS 458
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACDCGRGAVFFSV 597
Y ++ +++ D I + + K VFIE + E L + +++ GAV V
Sbjct: 459 YEVLEGLLSANVDIQIQE--VSGKKVFIEKRGASSKENDLLVMAFKEEAKRD-GAVLLGV 515
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF--DAL 655
G+ +EG D+ VI+ G+P+ K+ A++ Y + F ++G + + A
Sbjct: 516 MGGRNSEGQDYSGDEMNGVILVGIPYARPTPKV-QAQIRYFENKFP-RKGRYYGYVLPAH 573
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
++ Q GRV RS+ + G ++ D R + R LP W+ ++ L
Sbjct: 574 KKLVQAAGRVHRSEEEKGAVVVLDYRLLWSNVRKDLPDWMKETIKPVTL 622
>gi|301756631|ref|XP_002914172.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like [Ailuropoda melanoleuca]
Length = 908
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 139/297 (46%), Gaps = 24/297 (8%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + + I P+V+ G
Sbjct: 610 VVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPENILPLVICSGPS 669
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W+ SG+L
Sbjct: 670 SQQLEFTYQKRELPQMMDETGRILCNLCTVVPGGVVCFFPSYEYQRQVYAHWDKSGLLAR 729
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y + CG+ GA+ SV GK++EGI+F +
Sbjct: 730 LAVRKKIFQEPKRANQVEQVLMEYSRCIKCCGQAGGTVTGALLLSVVGGKMSEGINFSDN 789
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T G AL + Q +GR
Sbjct: 790 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRGPGQPPPGKALVENLCMKAVNQSIGRA 849
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRK 721
IR + D+ ++ D+RY+R KLP WI RD + + +A R+F R+
Sbjct: 850 IRHQKDFASIVLLDQRYARPSILGKLPAWI----RDRVEVKATFGLAFAAMRKFHRE 902
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLC+N V +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVQRSPFGKDTRLVSLG--SRQNLCINEDVKTLSSA 278
Query: 128 DSVDAAC---------RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C +K A + + C F+ + + GV ++
Sbjct: 279 QLINDRCMEMQRSKHGKKNRAEEEKPKRRRQEHRAACPFYSYEQLHLLRDQVLVGVKDIE 338
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN
Sbjct: 339 QLVALGKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQ-VVLIDEAHN 397
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ + S V L A S++ Q +ER+ RL+A+
Sbjct: 398 LIDTITSIHSAEVSGAQLCQAH---SQLLQYMERY----GKRLKAK 436
>gi|241623164|ref|XP_002407529.1| CHL1 protein, putative [Ixodes scapularis]
gi|215501004|gb|EEC10498.1| CHL1 protein, putative [Ixodes scapularis]
Length = 429
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 15/290 (5%)
Query: 443 KPVFDRFQSVVITSGTLSPID------LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
K V + ++V++ GT+ P L P + ++ + + + +C + L++G
Sbjct: 136 KDVVSQARAVILAGGTMEPTSEFVDQLLIPAGVPPERILHFACGHVVPKSNLCALALSQG 195
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
+ + R+D R G LL+ + +VP G+VCFF SY Y + W SG+L
Sbjct: 196 PSGKTLEFTYQNRADVETIRELGNLLINVARVVPGGVVCFFPSYEYEKVVSEKWKSSGLL 255
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
+++ K +F E E L Y + GA+ F+V GK++EGI+F GR V
Sbjct: 256 EKLAARKPIFREPVKSSELEKMLALYGQCAKSSTGALLFAVVGGKMSEGINFSDDMGRCV 315
Query: 617 IMFGVPFQYTLSKILLARLEYLRDTF-QIKEG---DFLTFD--ALRQAAQCVGRVIRSKA 670
+M G+PF S + +++++L T+ Q +G + +D ++ Q +GR IR K
Sbjct: 316 VMVGLPFPNARSPEMKSKIDFLNATYPQSSDGRSAGKVYYDNVCMKAVNQSIGRAIRHKD 375
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
DY ++ D+RY R LP WI L AH T A ++F R
Sbjct: 376 DYATILLVDQRYQRPSISKALPSWIRDSLA-AHSKFGT--AFAAIQQFFR 422
>gi|403222902|dbj|BAM41033.1| uncharacterized protein TOT_030000294 [Theileria orientalis strain
Shintoku]
Length = 745
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 165/687 (24%), Positives = 279/687 (40%), Gaps = 136/687 (19%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA-A 124
N +++ C+RT ++ + + E + L + L + LAIG R ++C+N + +
Sbjct: 164 NKTQIVICSRTFSQLNQFVKEFRKL-----KELNGNVR-LAIG-CRRSHVCINDGIKSKC 216
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
+N D ++ CR+ + R+ E I TC + L+DL G
Sbjct: 217 KNSDELNEECRRSKCEY-RSDTMELSEIATCYALD-----------------LEDLVRLG 258
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
K C Y+ V A+VV+ Y +++ + + + K+++V+FDE HN+ I
Sbjct: 259 KDLNSCAYYSNLTTVPNADVVLAPYVTIINESIRENMGLRI-KDNIVIFDEGHNL----I 313
Query: 245 EALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWL 303
EA++ S + L G L ++ + +FK+ G L R+ E + L L +
Sbjct: 314 EAITESHSCKLNLRGLKDLLEQLKGYLNKFKSEIKGVL---LERITEIMKLVKGLVDGL- 369
Query: 304 SNPALPSDILKEAVPGNIRRAEHF-LHVL------RRLVQYLRGRLETENVEKEGPVSFV 356
A+ S+ +K E F H + + ++LRG E +
Sbjct: 370 -ERAVESENMKITTFNVKYGLEDFKFHEIISFLSSTQFCRHLRGYAERQ----------- 417
Query: 357 ASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIII 416
I +A + +K CY S++ L+ F+++ CD + I+
Sbjct: 418 YHIKVNAELGEKVA--CYT---SMIYALK-----SFIYLLLYCDTNDQILVSKDESDTIL 467
Query: 417 EPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLY---------PR 467
E F PV S DA +SV++ SGTLSPI+ + P
Sbjct: 468 EIF---------PVA--SVRDA-----------RSVIVMSGTLSPIEEFLSLVPAKTEPY 505
Query: 468 LLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+ PV + M+ D M L D L+ +V
Sbjct: 506 IHKSPPVFANDRFMTAIIDRALIMALEYLCD----------------------LIENLVE 543
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
+VP+GIVCFF SYSY++ + SG + ++ K VF E ++V Y + C
Sbjct: 544 VVPNGIVCFFASYSYLNVFYNFFVKSGTMDKVSSKKTVFREQKNVN----VFPEYSRNC- 598
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF-----------QYTLSKILLARLE 636
RGA+ +V G +EG+DF RLV++ G+P+ +Y K L E
Sbjct: 599 LERGAILLAVFGGNQSEGVDFSDELARLVLLVGIPYPPDSIKLKIKREYYSKKALECANE 658
Query: 637 YLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIL 696
D + + T + QC+GR +R K DY +I D RY R + L ++
Sbjct: 659 SSSDNYMKLSKEQRTLMCYKTINQCIGRAMRHKGDYAAVILLDSRYRRREASLYLMNYVR 718
Query: 697 SHLRDAHLNLSTDMALHIAREFLRKMA 723
+ + L + AL +EF +K++
Sbjct: 719 KSISEHELKSTKFTAL--LQEFYKKLS 743
>gi|392560811|gb|EIW53993.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 875
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 156/623 (25%), Positives = 266/623 (42%), Gaps = 57/623 (9%)
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
A+ L SRK LC++ R+ E +D ACR+ + P +E E + +
Sbjct: 248 AVSLGSRKQLCIHERL--REKASDLDEACRQMLGEKGKKRCPHLPTVE--EETKMLDLRD 303
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
+P + +DL G+ CPYF AR + A +V+ Y LL + ++
Sbjct: 304 QILAVPKDI---EDLFLTGQAADTCPYFGARKAIPQAQLVLLPYNLLLQRTAREALGIDL 360
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS-RINQEIERFKATDAGRLRAE 284
+ VV+ DEAHN+ + + + + +TL A LS +++ R T A L+
Sbjct: 361 TGQ-VVIIDEAHNLTSTLLSLSTTRLPLRTLVNARHQLSIYLSRFRNRLSTTHALHLK-- 417
Query: 285 YNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLET 344
RL+ L W + L D A G R +E + L+Q L + E
Sbjct: 418 --RLMNLLDALVQYAEEW-RDAQLKVDKGNGAA-GKARASEVEVMTSAELLQRLGRKAEG 473
Query: 345 EN---VEKEGPVSFVASITAHAGIDQKTL-RFCYERLHSLMLTLEITDTDEFLHIQTICD 400
N VEK S +A + G KTL + + + L + T LH +
Sbjct: 474 VNLLEVEKYLRESKIARKIS--GYSVKTLEKAAGQDIAKLAKLARLASTTPPLH--AVES 529
Query: 401 FATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLS 460
F T + + + + D ++ ++ + + + V D ++V++ GT+S
Sbjct: 530 FITALSASSDDGRVTLSMVDGQVE------IKYQHLNPATYFQEVIDSARAVILAGGTMS 583
Query: 461 PID-LYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
PID + +L + P + + S + + + +VL +G + K+ R D G+
Sbjct: 584 PIDDVVHQLFSALPADRLSTFSCGHIIPPENLQTLVLKKGPRGGELQFKYQQRGDEGLIA 643
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
G++L+ ++VP G+V F SY++++ + W G+L+++ K VF E Q E
Sbjct: 644 ELGQILLNFTNVVPGGMVVFVPSYAFLNTVTKQWQAGGLLEKLNAKKKVFSEPQQSNEVE 703
Query: 577 LALDNYRKACDCG--------RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
L +Y G RGA+ F+V K++EG++F R V++ G+PF S
Sbjct: 704 AVLRDYSAQIQSGDDSAGGKKRGALLFAVVGAKLSEGLNFADDLARAVVIIGLPFANLGS 763
Query: 629 KILLARLEYLRDTFQ--------------IKEGDFLTFDALRQAA--QCVGRVIRSKADY 672
L R+ Y+ Q K+ ++ + A Q +GR IR + D+
Sbjct: 764 PELRERMNYVNRLEQRRRAAAAPSSRPGGAKDAGTELYENMCMNAVNQSIGRAIRHRGDW 823
Query: 673 GMMIFADKRYSRHDKRSKLPGWI 695
+I D RY+ RSKLP WI
Sbjct: 824 AALILVDGRYASPRIRSKLPKWI 846
>gi|281349618|gb|EFB25202.1| hypothetical protein PANDA_002012 [Ailuropoda melanoleuca]
Length = 897
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + + I P+V+ G
Sbjct: 609 VVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPENILPLVICSGPS 668
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W+ SG+L
Sbjct: 669 SQQLEFTYQKRELPQMMDETGRILCNLCTVVPGGVVCFFPSYEYQRQVYAHWDKSGLLAR 728
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y + CG+ GA+ SV GK++EGI+F +
Sbjct: 729 LAVRKKIFQEPKRANQVEQVLMEYSRCIKCCGQAGGTVTGALLLSVVGGKMSEGINFSDN 788
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T G AL + Q +GR
Sbjct: 789 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRGPGQPPPGKALVENLCMKAVNQSIGRA 848
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D+RY+R KLP WI
Sbjct: 849 IRHQKDFASIVLLDQRYARPSILGKLPAWI 878
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 24/225 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLC+N V +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVQRSPFGKDTRLVSLG--SRQNLCINEDVKTLSSA 278
Query: 128 DSVDAACR--KRTASWVRALAAENPNIE------TCEFFENYEKAASAAVLPPGVYTLQD 179
++ C +R+ E P C F+ + + GV ++
Sbjct: 279 QLINDRCMEMQRSKHEKNRAEEEKPKRRRQEHRAACPFYSYEQLHLLRDQVLVGVKDIEQ 338
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+ DEAHN+
Sbjct: 339 LVALGKEARACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQ-VVLIDEAHNL 397
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ S V L A S++ Q +ER+ RL+A+
Sbjct: 398 IDTITSIHSAEVSGAQLCQAH---SQLLQYMERY----GKRLKAK 435
>gi|414881660|tpg|DAA58791.1| TPA: hypothetical protein ZEAMMB73_410850, partial [Zea mays]
Length = 941
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 148/291 (50%), Gaps = 21/291 (7%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L C + LA++ +S+++TSGTLSP+D LN V ++ D +
Sbjct: 431 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISSDQV 490
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ G +++ + R+ + G +V IVPDG++ FF SYS MD +
Sbjct: 491 WVGVVPVGPSGHALNSSYRTRNTIQYKQELGTAIVNFARIVPDGLLVFFPSYSMMDMCVD 550
Query: 549 TW---------NDSGILKEIMQHKLVFIETQDVVETTLALDNYR-KACDCGRGAVFFSVA 598
W +++ I + I +HK IE + A+++YR K D GA+FF+V
Sbjct: 551 FWKNRNHSNSASENTIWQRICKHKQPVIEPRQSSNFQSAIEDYRAKLHDSSSGAIFFAVC 610
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQY-TLSKILLARLEYL--------RDTFQIKEGDF 649
RGKV+EG+DF GR VI+ G+PF T +K+ L R EYL ++T + ++
Sbjct: 611 RGKVSEGLDFADRAGRAVIVTGMPFATPTDAKVRLKR-EYLDKQGTPSNKNTKMLTGEEW 669
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q VGRVIR + DYG +I+ D+R+ + +S++ W+ H++
Sbjct: 670 YVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWPNYQSQMSYWLRPHIK 720
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 68/288 (23%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL--SLI--- 56
++ + V V FP+D Y Q +YM + +L + LLE PTGTGKT+ LL SL
Sbjct: 3 VYSIRGVNVDFPFD-AYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWRR 61
Query: 57 ---------------------------------TSYVLSKPENPVKLIYCTRTVHEMEKT 83
TS + PV +IY +RT ++ +
Sbjct: 62 TFGEFLRVGRGGGGTKQLPYGSQPSASQQSEDSTSQKQQQSRYPV-IIYASRTHSQLRQV 120
Query: 84 LAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTAS 140
+ ELK +Y+ + +A+ L SR+ +C++ V R +A C+KR
Sbjct: 121 IKELKAT-SYRPK--------MAV-LGSREQMCIHDEVSKLHGRAQNNACHFLCKKRRCP 170
Query: 141 WVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQ 200
N EF +N + + + ++DL G+ +G CPY+++R + +
Sbjct: 171 H---------NNHVAEFIKNKPELGNEP------FDIEDLINIGRHKGPCPYYISRELSK 215
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
+++ Y YL+DP ++ +V++FDEAHN++++C +A S
Sbjct: 216 SVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAAS 263
>gi|327272138|ref|XP_003220843.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Anolis carolinensis]
Length = 914
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 129/275 (46%), Gaps = 24/275 (8%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSR-----SFKMSLTRDCICPMVLTRGSD 498
V ++V+I GT+ PI D +LL + S + D I P++L G
Sbjct: 613 VLKECRAVIIAGGTMQPIADFREQLLQSAGASADRIEEFSCGHVIPPDNILPIILCSGPS 672
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ ++ R P + G++L + +IVP G+VCFF SY Y ++ W +G+L +
Sbjct: 673 NQQLDFTYEKRGLPQMMEETGRILCNLCNIVPGGMVCFFPSYEYEKQVYMHWGKTGLLTQ 732
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K C + GA+ FSV GK++EGI+F
Sbjct: 733 LAAKKKIFQEPKRANQVEQVLAEYAKCIKRCNQTGGPMTGALLFSVVGGKMSEGINFSDD 792
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG--------DFLTFDALRQAAQCVG 663
GR VIM G+P+ S L ++ YL T G D L A+ Q+ +G
Sbjct: 793 LGRCVIMVGMPYPNIKSPELQEKIAYLNKTMPKAAGQAPGRMLIDNLCMKAVNQS---IG 849
Query: 664 RVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSH 698
R IR + D+ ++ D RYSR +KLP WI S
Sbjct: 850 RAIRHQKDFASIVLLDHRYSRPAIFNKLPQWIKSQ 884
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E+ K+ YC+RT ++ + +H Q G ++ ++G SR+NLCVN V
Sbjct: 224 EHVTKIYYCSRTHSQL------AQFVHEVQKSPFGKEIRLASLG--SRQNLCVNEEVRRM 275
Query: 125 ENRDSVDAACR--KRTASWVRALAAENPNIET------CEFFENYEKAA--SAAVLPPGV 174
++ C ++ ++ E +T C F+ +YE VL V
Sbjct: 276 GAVQLINDRCMEMQKNKHEKKSTGEETEKKKTRVSRTVCPFY-SYEHMQFLRDEVLVQ-V 333
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++ L GK+ CPY+ +RH + A +VV YQ LL ++ K+ VV+ D
Sbjct: 334 KDIEQLVTLGKEMKACPYYGSRHAIPAAQLVVLPYQMLLHDATRNASGIKL-KDQVVIID 392
Query: 235 EAHN-IDNV-CIEALSVS 250
EAHN ID + CI + VS
Sbjct: 393 EAHNLIDTITCIYSAQVS 410
>gi|218202591|gb|EEC85018.1| hypothetical protein OsI_32311 [Oryza sativa Indica Group]
Length = 1265
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 182/826 (22%), Positives = 314/826 (38%), Gaps = 174/826 (21%)
Query: 34 AKGHCLLEMPTGTGKTIALLSLITSYVLSKP----------------------------- 64
+ H LLE PTGTGK+++LL ++ P
Sbjct: 15 GRSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAAAAAAAPDPFLHGGGFVPDDTQK 74
Query: 65 -------------ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSS 111
+N + Y TRT ++ + + E + +Y+ R +AI L+S
Sbjct: 75 QATPGVPEKATRKKNVPTIYYATRTHAQITQVVREYRKT-SYRVR--------MAI-LAS 124
Query: 112 RKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP 171
RK+ CVN V + N +D C+ + + + + C ++N +K + L
Sbjct: 125 RKHYCVNKNVCMSGN---IDELCK----------SLLDDSAQGCPEYKNAQKLSRHPSLQ 171
Query: 172 PG----VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK 227
G V+ ++DL G++ CPYF A+ M + A +V Y YL+ P V + ++ +
Sbjct: 172 IGGCYEVHDIEDLIRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISPIVRRAMDIDI-R 230
Query: 228 ESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA-GRLRAEYN 286
S++V DEAHNI+++ +A S V ++ L + QE+E +A ++ +
Sbjct: 231 GSIIVLDEAHNIEDIARDAGSFDVDEES-------LLFLRQELEGLVTDEAVAKIYEPLH 283
Query: 287 RLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETEN 346
+++GL N W+ GN + F H + G +
Sbjct: 284 EVIQGL-------NGWIDE------------QGNNLQKNEFEHP----ASFWTGEEAMKE 320
Query: 347 VEKEG--PVSF------------VASITAHAGI-----DQKTLRFCYERLHSLMLTLEIT 387
++ G PV+F AS G+ TL + L
Sbjct: 321 LKYAGITPVNFPVLQECATKAIKAASDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRH 380
Query: 388 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIP-DPVLQLSCHDASLAVKPVF 446
D L +Q FA G + +II + I V+ L C + ++ + +
Sbjct: 381 SNDYQLALQR---FAKCEGANMMSYDLII--CNSVTSFIGWKCVMSLWCLNPAVVFRDIA 435
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC-ICPMVLTRGSDQLPVSTK 505
D SV++TSGTLSP+ + L + D + VL+ G ++
Sbjct: 436 DLTLSVILTSGTLSPMGSFASELGVQFEACMEAPHVINADSQVFATVLSSGPTGRRLNAS 495
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLV 565
+ ++ G L E+ +VP G + FF SY+ ++++ W +G + K V
Sbjct: 496 YRTANEYSFQDELGATLEEICRVVPGGALVFFPSYNLLEKLQRRWYQTGQWARLEAQKHV 555
Query: 566 FIE-------------------------------TQDVVETTLALDNYRKACDCGRGAVF 594
+E + +V+ + D+ +++ GA F
Sbjct: 556 CVEPRGSTEELEPVLKGYYNAILGKVPPKKGRGGAKQIVKNRVTKDSSQESAK--GGAAF 613
Query: 595 FSVARGKVAEGIDFDRHYGRLVI-------MFGVPFQYTLSKILLARL---EYLRDTFQI 644
+V RGKV+EGIDF R+V+ +F P + ++ L + Y +
Sbjct: 614 LAVCRGKVSEGIDFSDDKARVVVSFVFSSYVFYAPERINDVQVKLKKRYNDSYKSSKDLL 673
Query: 645 KEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
++ A R Q GR IR K DYG +I D+RY + W+ + +R+
Sbjct: 674 SGNEWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGT 733
Query: 705 NLSTDMAL----HIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKM 746
T L A E ++ AQ + L SQ D K+
Sbjct: 734 FQETMDGLTRFFQNAEEQIKIKAQGVSPKDRLDACVLPSQGDKRKL 779
>gi|195347574|ref|XP_002040327.1| GM18989 [Drosophila sechellia]
gi|194121755|gb|EDW43798.1| GM18989 [Drosophila sechellia]
Length = 868
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 8/260 (3%)
Query: 450 QSVVITSGTLSPI-DLYPRLLNF--HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+++VI GT+ P +L +L +V R + + D + P V++ G P+S KF
Sbjct: 591 RAIVIAGGTMQPTQELKEQLFTGCQDRLVERFYNHVVADDAVLPFVISNGPSGAPLSFKF 650
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
R+ + R +L + +VP G+VCF SY Y+D++ SG L+ I K VF
Sbjct: 651 AHRASAEMLRELSMVLRNLCQVVPGGVVCFLPSYEYLDKVYKYLEQSGTLETISCRKSVF 710
Query: 567 IETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
E E LDNY A GA+ SV GK++EG++F GR V++ G+P+
Sbjct: 711 REVSGSAEQL--LDNYALAIKRPASGGALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYS 768
Query: 625 YTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
+ S L R+++L + G ++ ++ QC+GR +R DY + DKR++
Sbjct: 769 NSQSPELRQRMQHLDEKLGPGAGNEYYENLCVKAVNQCIGRAVRHINDYACVYLLDKRFA 828
Query: 684 RHDKRSKLPGWILSHLRDAH 703
R KLP WI H+ +++
Sbjct: 829 DPKIRGKLPKWISRHIVESN 848
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV----- 121
PV++ +C+RT ++ + + EL+ + Q+ + I L SR+ LC N V
Sbjct: 194 PVQIFFCSRTHSQLAQIVTELRKTPHGQS--------VRCISLGSRQQLCRNPAVRKLKH 245
Query: 122 LAAENRDSVDAACRKR--TASWVRALAAENPNIETCEFFENYEKAASA-------AVLPP 172
+ N +D A +K S L AE + C F KAAS A+ P
Sbjct: 246 VGLMNERCLDMATKKARPNPSKKSRLTAETNS--RCPF-----KAASLVESLRDLALTEP 298
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+++L G G C Y+ +R V+ A +++ YQ LL + + K S+V+
Sbjct: 299 --LDIEELANEGTACGGCSYYASRSAVEHAQLILLPYQLLLQKSARNQLGISL-KASIVI 355
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKAT 276
DEAHN+ + + + RQ LE A +S + ++ AT
Sbjct: 356 VDEAHNLLDSVAQLHGSEINRQQLERAKVQISAYKEHFQKRFAT 399
>gi|390986509|gb|AFM35774.1| hypothetical protein, partial [Oryza eichingeri]
Length = 62
Score = 132 bits (332), Expect = 6e-28, Method: Composition-based stats.
Identities = 61/62 (98%), Positives = 61/62 (98%)
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL DAHLNLSTDMALHIA
Sbjct: 1 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIA 60
Query: 716 RE 717
RE
Sbjct: 61 RE 62
>gi|359482607|ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like [Vitis
vinifera]
Length = 1084
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 39/329 (11%)
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
S+++TSGTLSP++ + + L V ++ + I V+ G ++ + R
Sbjct: 443 SIILTSGTLSPLESFAQELKLEFPVRLENPHVISSNQIWAGVVPAGPSGCSFNSSYRTRD 502
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW---------NDSGILKEIMQ 561
+ G +V IVPDG++ FF SY +++ + W N S I + I +
Sbjct: 503 SLEYKQELGNAIVNFARIVPDGLLVFFPSYYILEQCVGCWKNKSHANSTNSSTIWERICK 562
Query: 562 HKLVFIETQDVVETTLALDNY-RKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
HK IE + ++++Y K D GAVFF+V RGKV+EG+DF H GR V++
Sbjct: 563 HKQPVIEPRQSSLFPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 622
Query: 620 GVPFQY-TLSKILLARLEYLRDTFQIKEG------------DFLTFDALRQAAQCVGRVI 666
G+PF T K+ L R + KEG ++ T A R Q VGRVI
Sbjct: 623 GIPFAMRTDPKVRLKREFLDQRGLSQKEGCKTLPIQVLTGEEWYTQQASRAVNQAVGRVI 682
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPY 726
R D+G +IF D+R++ +++S++ WI H++ + D+ + R F R
Sbjct: 683 RHCHDFGAIIFCDERFAHPNRQSQISLWIQPHIK--CYSKFGDVVFTLTR-FFR------ 733
Query: 727 DKAGSIGRKTLLSQADLEKMTNDGSINEM 755
AG+ G L S+A+ + G +NEM
Sbjct: 734 -DAGTHGPPQLKSRAE-----DRGDVNEM 756
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 62/282 (21%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-- 59
I+K+ + V FP++ Y Q YM ++ ++L + + LLE PTGTGKT+ LL ++
Sbjct: 3 IYKIRGIDVDFPFE-AYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAWRK 61
Query: 60 --------------------------VLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNY 93
S N +IY +RT ++ + + ELK +Y
Sbjct: 62 SLGGFSTGRSEWNGQIMGSQHSDVPHSQSAKTNLPTIIYASRTHSQLRQVIQELKRT-SY 120
Query: 94 QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAENP 150
+ + + L SR+ LC++ V R +A CRKRT
Sbjct: 121 RPK---------MVVLGSREQLCIHEEVSLLRGRAQTNACHSLCRKRTKKG--------- 162
Query: 151 NIETCEFFENYEKAASAAVLPPGV----YTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+ +Y + + PG+ ++DL G+ G CPY+++R + + +++
Sbjct: 163 ------YCGHYSRVSDFMKYNPGLGDDPIDIEDLVNIGRSNGPCPYYVSRELHKVVDILF 216
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
Y YL+D +S S+++FDEAHN++ +C +A S
Sbjct: 217 APYNYLIDRGNRKSLSV-CWNNSILIFDEAHNLEGLCADAAS 257
>gi|428173640|gb|EKX42541.1| hypothetical protein GUITHDRAFT_111516 [Guillardia theta CCMP2712]
Length = 1115
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 154/677 (22%), Positives = 293/677 (43%), Gaps = 123/677 (18%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + +RT ++ + + EL+ +T++ + +I +G SR++ C+N RV+A+E
Sbjct: 152 KIYFASRTHSQIAQLVRELR-----KTKY---SPRICVLG--SREHYCINPRVMASE--- 198
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-GVYTLQDLRAFGK-- 185
K +A EN +C F+ ++ + L P G L D+ +
Sbjct: 199 -------KPKGEECKAKLKEN----SCSFYHGVQRLENHKDLQPHGKLRLHDIEGRDRPP 247
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIE 245
+ CPYF AR + + ANV+ Y YL++P + + E++ +V++ DEAHNI++VC E
Sbjct: 248 KVHGCPYFAARSLAKRANVIFCPYNYLVEPAIRDAMGVELEGNTVII-DEAHNIEDVCRE 306
Query: 246 ALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSN 305
A S+ ++ + L E NR E + + N
Sbjct: 307 AASLELKHEDL--------------------------VETNRQWEEMQFAEDAHNY---- 336
Query: 306 PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS-ITAHAG 364
+L +AV N+ A + + L+Q + L + ++ F+A+ + +AG
Sbjct: 337 ------MLLDAVVRNL--ASYMKEQSQNLIQ--QNHLYSYKIQS----GFIATDVFRNAG 382
Query: 365 IDQKTLRFCYERLHSLMLTLEITDT---DEFLHIQTICDFATLVGTYTRGFSIIIEPFD- 420
I+++TL+ L + L+ + +E + + +++ + PFD
Sbjct: 383 INEETLKPLNSFLQKAIKKLDEVENQREEESSPLPPAKSLKLVQDIFSKAQLLFQNPFDY 442
Query: 421 -----------ERMPHIPDPV-----LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL 464
ER P + L C + ++A K V + ++V++TSGTLSPI
Sbjct: 443 RLAIEQRTTREERGGRRPGQAKLELSMSLWCLNPAVAFKAVSSQTRAVILTSGTLSPITS 502
Query: 465 YPRLLN--FH------PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVAR 516
+ L FH V+ S ++ + C P G+ L ++ + +
Sbjct: 503 FATELGTTFHMTYQAPHVIDTSKQVFVGSVCSVP-----GNPLLKLNGSYKHQDSVIYQD 557
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
N G ++E+ I+P G++CFF SY ++++ + W +G ++I + K + +E + +
Sbjct: 558 NLGAAVLELCKIIPFGVLCFFPSYGLLEKVKSRWMATGQYEKIDEVKDIIVEPRTGEDFD 617
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLA--- 633
A+++Y A +G + + F + G+ V P + + LA
Sbjct: 618 RAMESYYDAIARSKGEAAPKATKKAAS--KSFFKKAGQKVP---TPGKAKTGAVFLAVCR 672
Query: 634 ---RLEYLRDTFQIKEG-----DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
+++ + ++ +G ++ + A R Q VGR IR DYG +IF D+RY +
Sbjct: 673 GKVKVKKTYNDNKVGDGLLNGDEWYSLQAFRAINQAVGRCIRHVNDYGSIIFLDERYQQK 732
Query: 686 DK-RSKLPGWILSHLRD 701
+S L W+ L D
Sbjct: 733 SSIKSNLSKWVRECLVD 749
>gi|297743289|emb|CBI36156.3| unnamed protein product [Vitis vinifera]
Length = 777
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 136/269 (50%), Gaps = 19/269 (7%)
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
S+++TSGTLSP++ + + L V ++ + I V+ G ++ + R
Sbjct: 474 SIILTSGTLSPLESFAQELKLEFPVRLENPHVISSNQIWAGVVPAGPSGCSFNSSYRTRD 533
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW---------NDSGILKEIMQ 561
+ G +V IVPDG++ FF SY +++ + W N S I + I +
Sbjct: 534 SLEYKQELGNAIVNFARIVPDGLLVFFPSYYILEQCVGCWKNKSHANSTNSSTIWERICK 593
Query: 562 HKLVFIETQDVVETTLALDNY-RKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
HK IE + ++++Y K D GAVFF+V RGKV+EG+DF H GR V++
Sbjct: 594 HKQPVIEPRQSSLFPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 653
Query: 620 GVPFQY-TLSKILLARLEYLRDTFQIKEG-------DFLTFDALRQAAQCVGRVIRSKAD 671
G+PF T K+ L R + KEG ++ T A R Q VGRVIR D
Sbjct: 654 GIPFAMRTDPKVRLKREFLDQRGLSQKEGCKVLTGEEWYTQQASRAVNQAVGRVIRHCHD 713
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+G +IF D+R++ +++S++ WI H++
Sbjct: 714 FGAIIFCDERFAHPNRQSQISLWIQPHIK 742
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 40/260 (15%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVL 61
I+K+ + V FP++ Y Q YM ++ ++L + + LLE PTGTGKT+ LL ++
Sbjct: 3 IYKIRGIDVDFPFE-AYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAWRK 61
Query: 62 SKPE------NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
+ P N +IY +RT ++ + + ELK +Y+ + + L SR+ L
Sbjct: 62 NVPHSQSAKTNLPTIIYASRTHSQLRQVIQELKRT-SYRPK---------MVVLGSREQL 111
Query: 116 CVNSRVLAAENRDSVDAA---CRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP 172
C++ V R +A CRKRT + +Y + + P
Sbjct: 112 CIHEEVSLLRGRAQTNACHSLCRKRTKK---------------GYCGHYSRVSDFMKYNP 156
Query: 173 GV----YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
G+ ++DL G+ G CPY+++R + + +++ Y YL+D +S
Sbjct: 157 GLGDDPIDIEDLVNIGRSNGPCPYYVSRELHKVVDILFAPYNYLIDRGNRKSLSV-CWNN 215
Query: 229 SVVVFDEAHNIDNVCIEALS 248
S+++FDEAHN++ +C +A S
Sbjct: 216 SILIFDEAHNLEGLCADAAS 235
>gi|303289303|ref|XP_003063939.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454255|gb|EEH51561.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 770
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 139/286 (48%), Gaps = 28/286 (9%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL--NFHPVVSR----------SFKMSLT 484
DA+ K V D ++VV+ GTLSPID R L + PV S+ S +
Sbjct: 482 DAAARFKSVVDESRAVVLVGGTLSPIDELARALFPSAAPVGSKIASETTLSSLSLGHVVP 541
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
++ + P+ + +G + F R V G+LL+ ++ P G+V FF S+ Y D
Sbjct: 542 KESLLPIAVGKGPGGVRFDFSFGKRDAFDVVDELGRLLINASAVTPGGVVVFFPSFKYAD 601
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDV-------VETTLALDNYRKACDCGR-GAVFFS 596
++ W +G + ++ +HK VF E + TT + N + G+ GAV
Sbjct: 602 DVYQRWVRTGAVGQLAKHKAVFREPRKARSPIHTGSRTTPSACNPKGGGGGGQTGAVMLC 661
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL----RDTFQIKEGDFLTF 652
V GK++EGI+F GRLVIM G+P+ L AR+++L T + G +
Sbjct: 662 VCGGKLSEGINFKDDLGRLVIMVGLPYANPDDPELSARMKHLDAMDAATLDVPRGRAY-Y 720
Query: 653 DAL--RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRS-KLPGWI 695
+AL R Q VGR IR DY ++FAD RY D S +LPGWI
Sbjct: 721 EALCMRSVNQSVGRAIRHARDYAAILFADHRYVNPDGASAQLPGWI 766
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 25/232 (10%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
P ++I+C+RT ++ + + EL T GP + AI ++SR LCVN V +
Sbjct: 113 PTQVIFCSRTHSQLTQVVGELN-----STSFGGPEGTVNAIAIASRAQLCVNPEVRSVGV 167
Query: 127 RDS-VDAAC----RKRTASWVRALAAENPNIET--------CEFFENYEKAASAAVLP-- 171
++ ++ C + T + A +P C F +N A +
Sbjct: 168 SNARLNERCLELGKPTTTKSSSSATATDPATGKKKKKTAGGCPFLKNRRAAVAELADAAL 227
Query: 172 PGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
++DL A G ++ CPY+ AR + A++V Y LL + + + K +VV
Sbjct: 228 SQPMDIEDLAALGVRRRACPYYAARRALPRADLVFAPYASLLHAETRESLGINL-KGAVV 286
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF-KATDAGRLR 282
VFDEAHN+ A + ++ L +ERF K AG LR
Sbjct: 287 VFDEAHNLQEAVHGAYGAVITGSQIKAVKAMLVAY---VERFHKRLAAGNLR 335
>gi|326478541|gb|EGE02551.1| DNA helicase [Trichophyton equinum CBS 127.97]
Length = 850
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 31/298 (10%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLY-PRLLNFHP---VVSRSFKMSLTRDCICPMV 492
D + K + + ++V++ GT+ P+D Y LL++ P + + ++ + +D + +
Sbjct: 537 DPTSRFKELVEDARAVILAGGTMEPMDDYVNHLLSYVPRDKIKTFTYGHVIPKDNLMAIP 596
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
+ RG D + FD R + + G+ + SI+PDG+V FF SY Y+ ++ W+
Sbjct: 597 IDRGMDGTEFNFTFDQRRSEKMIISLGRTISRYCSIIPDGVVVFFPSYDYLATVLKVWSS 656
Query: 553 SGILKEIMQH-KLVFIETQDVVETTLA----------LDNYRKACDCGRGAVFFSVARGK 601
S + + K +F E Q T + L Y + D G+G + SV GK
Sbjct: 657 SSGILSSLSRLKPIFHEPQSTGSTNGSANANTNTDSLLSQYSASVDAGKGGLLLSVMGGK 716
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEGD------------ 648
++EGI+F GR VI+ G+PF T + I A+L+++ + +++ +
Sbjct: 717 LSEGINFSDALGRGVIVVGLPFPNTRNAIWQAKLQHVEKKAYELADPSRSEERRACGKAA 776
Query: 649 ---FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
F +R QC+GR IR K DY ++ D+RY + KLPGWI L H
Sbjct: 777 SRAFYENTCMRTVNQCIGRAIRHKGDYAAILMIDRRYQTERIQGKLPGWIRGSLLKGH 834
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 42/272 (15%)
Query: 46 TGKTIALLSLITSYV----LSKPENPVKLIYCTRTVHEMEKTLAELK-----------LL 90
+ T+ALL + L + E VK+IYC+RT ++ + E++ L
Sbjct: 157 SSDTLALLEKLKGPARQIELEEDEESVKIIYCSRTHSQLIQFAQEMRRVMPISSIPPELD 216
Query: 91 HNYQTRHLG----PAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
N + G I L+SRK LC+N V + + +++ C L
Sbjct: 217 DNLEEEKKGNQQDEGEWIKHTPLASRKTLCINPSVRSLSSATAINERC----------LE 266
Query: 147 AENPNI---ETCEFFENYEKAASAAV----LPPGVYTLQDLRAFGKQQGWCPYFLARHMV 199
+ PN+ C + + + L V ++DL G + CPY+ AR +
Sbjct: 267 IQRPNVAAEHKCPYLPTKDNELKTSQFQDHLLARVNDIEDLPPLGTKMSICPYYAARTAM 326
Query: 200 QFA--NVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLE 257
+ + VV Y LL ++ K SV+V DEAHN+ + + SV+V L+
Sbjct: 327 RASATEVVTLPYPLLLQQSAREALNLSA-KNSVIVIDEAHNLIDAIVNIHSVTVSLSQLK 385
Query: 258 GATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
A L++I RFK+ GR R +L+
Sbjct: 386 TA---LAQITTYARRFKSRLKGRNRVYIAQLI 414
>gi|218188567|gb|EEC70994.1| hypothetical protein OsI_02661 [Oryza sativa Indica Group]
Length = 984
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L C + LA++ +S+++TSGTLSP+D LN V + D I
Sbjct: 408 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIASDQI 467
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ G P+++ + R + G +V IVPDG++ FF SYS MD+ I
Sbjct: 468 WVGVVPVGPSGHPLNSSYRTRETLKYKQELGITIVNFARIVPDGLLVFFPSYSMMDKCIN 527
Query: 549 TWNDSG---------ILKEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSV 597
W D I + I +HK IE + A+++Y GA+FF+V
Sbjct: 528 CWKDRNHENSSDEHTIWQRICKHKQPVIEPRQSSNFPNAIEDYAAKLRDSSTTGAIFFAV 587
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL--------RDTFQIKEGDF 649
RGKV+EG+DF GR VI+ G+PF + + +YL +++ + ++
Sbjct: 588 CRGKVSEGLDFADRAGRAVIVTGMPFATPTDPKVRLKRDYLDKLGSASNKNSKALTGEEW 647
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q VGRVIR + DYG +I+ D+R+ + +S++ W+ +++
Sbjct: 648 YVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWQNYQSQMSYWLRPYIK 698
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 67/259 (25%)
Query: 31 ALDAKGHCLLEMPTGTGKTIALLSLITSY------------------------VLSKPEN 66
+L + LLE PTGTGKT+ LL ++ S+P
Sbjct: 7 SLQQGKNALLESPTGTGKTLCLLCSALAWRRTFGEFLRGGGGGGGGGGSQQPPYGSQPSG 66
Query: 67 --------------PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSR 112
PV +IY +RT ++ + + ELK +Y+ + +A+ L SR
Sbjct: 67 SQHSGGSASQSSRYPV-IIYASRTHSQLRQVIKELKAT-SYRPK--------MAV-LGSR 115
Query: 113 KNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAENPNIETCEFFENYEKAASAAV 169
+ +C++ V R +A C+KR W R + EF N + S A
Sbjct: 116 EQMCIHEEVSKLRGRQQNNACHYLCKKR---WCRH------HNSVAEFMRNNSELGSEAC 166
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
++DL G+ +G CPY+++R + + +++ Y YL+DP ++ +
Sbjct: 167 ------DIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNA 220
Query: 230 VVVFDEAHNIDNVCIEALS 248
V++FDEAHN++++C +A S
Sbjct: 221 VLIFDEAHNLESICADAAS 239
>gi|222618779|gb|EEE54911.1| hypothetical protein OsJ_02439 [Oryza sativa Japonica Group]
Length = 1025
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L C + LA++ +S+++TSGTLSP+D LN V + D I
Sbjct: 449 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIASDQI 508
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ G P+++ + R + G +V IVPDG++ FF SYS MD+ I
Sbjct: 509 WVGVVPVGPSGHPLNSSYRTRETLKYKQELGITIVNFARIVPDGLLVFFPSYSMMDKCIN 568
Query: 549 TWNDSG---------ILKEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSV 597
W D I + I +HK IE + A+++Y GA+FF+V
Sbjct: 569 CWKDRNHENSSDEHTIWQRICKHKQPVIEPRQSSNFPNAIEDYAAKLRDSSTTGAIFFAV 628
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL--------RDTFQIKEGDF 649
RGKV+EG+DF GR VI+ G+PF + + +YL +++ + ++
Sbjct: 629 CRGKVSEGLDFADRAGRAVIVTGMPFATPTDPKVRLKRDYLDKLGSASNKNSKALTGEEW 688
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q VGRVIR + DYG +I+ D+R+ + +S++ W+ +++
Sbjct: 689 YVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWQNYQSQMSYWLRPYIK 739
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 83/304 (27%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYML----------ELKRALDAKGHCLLEMPTGTGKTIA 51
++++ V V FP +++ EL ++ + LLE PTGTGKT+
Sbjct: 3 VYRIRGVDVDFPTTPTTARSHTWTASSNPSSSDGGELAGSIRQGKNALLESPTGTGKTLC 62
Query: 52 LLSLITSY------------------------------VLSKPEN--------------P 67
LL ++ S+P P
Sbjct: 63 LLCSALAWRRTFGEFLRGGGGGGGGGGGGGGAGSQQPPYGSQPSGSQHSGVSASQSSRYP 122
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
V +IY +RT ++ + + ELK +Y+ + +A+ L SR+ +C++ V R
Sbjct: 123 V-IIYASRTHSQLRQVIKELKAT-SYRPK--------MAV-LGSREQMCIHEEVSKLRGR 171
Query: 128 DSVDAA---CRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
+A C+KR W R + EF N + S A ++DL G
Sbjct: 172 QQNNACHYLCKKR---WCRH------HNSVAEFMRNNSELGSEAC------DIEDLVNIG 216
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
+ +G CPY+++R + + +++ Y YL+DP ++ +V++FDEAHN++++C
Sbjct: 217 RTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICA 276
Query: 245 EALS 248
+A S
Sbjct: 277 DAAS 280
>gi|255088938|ref|XP_002506391.1| predicted protein [Micromonas sp. RCC299]
gi|226521663|gb|ACO67649.1| predicted protein [Micromonas sp. RCC299]
Length = 644
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 172/684 (25%), Positives = 276/684 (40%), Gaps = 126/684 (18%)
Query: 6 EDVT--VYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY---- 59
E+VT V FPYD Y Q + M + AL A + LLE PTGTGKT+ LL +
Sbjct: 13 EEVTYSVDFPYD-AYDCQVTMMERVVEALHAGENALLESPTGTGKTLCLLCAALGWREKA 71
Query: 60 -----------------------VLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTR 96
P+ ++Y +RT ++ + + EL+ Y+ R
Sbjct: 72 HAGGGPDDVTVGPDARAAAAARGDDRAPDRGPLIVYASRTHSQLAQVIRELRATR-YRPR 130
Query: 97 HLGPAAKILAIGLSSRKNLCVNS--RVLAAENRDSVDAACRKRTASWVRALAAENPNIET 154
+AI + SR+ +CV+ RVLA ++ AAC+ RT S R+ A N
Sbjct: 131 --------MAI-MGSRQQMCVHKDVRVLAGAAQN---AACKARTQS--RSCAHHN----E 172
Query: 155 CEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCP------YFLARHMVQFANVVVYS 208
E F E ++DL G++ YF++ M + A++V
Sbjct: 173 LEHFRRREPNFGR----DDPVDIEDLVKLGERGVVGGGCGPCPYFMSLDMYKEADIVFMP 228
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y Y++DP + ++ + ++V+FDEAHNI++VC +A + L A IN+
Sbjct: 229 YNYVVDPAMRDVLGDRLDG-AIVLFDEAHNIESVCSDAAGFDIPASHLAQA------INE 281
Query: 269 EIERFKATDAG---------RLRAEYNRLVEGLALRGNLPNAWLSNPA----LPSDILKE 315
E F+A A R AEY +L L + A + N P + L E
Sbjct: 282 AQEAFEAAGADPGADARKPPRPAAEYKQLRGVLLALEDKVAAQVGNNGEECVKPGEWLFE 341
Query: 316 AVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYE 375
+ +++ E L +++ + Q S +A A G + Y
Sbjct: 342 LL-ASLKITEQTLEMIKSIAQ--------------DAASLLAGEAAAVGQRSRARASGY- 385
Query: 376 RLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPD----PVL 431
R++ L LE+ F + F + I + R P L
Sbjct: 386 RINELAEALELA-------------FRARREGHVGSFRLRIGADESRGGFGAGHGAGPTL 432
Query: 432 QLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP 490
C S+ + + ++ +SV++TSGTLSP+ + L + V + +
Sbjct: 433 SFWCFSPSVTMSHLAEKGVKSVILTSGTLSPMSSFASELGLNFRVRLENPHVVAPHQVWG 492
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
V+ G +++ + R G ++V IVPDG++ FF SY M + W
Sbjct: 493 GVVPVGPSGKRLNSTYRFRDTDEYKSELGNVVVNFARIVPDGMLVFFPSYGVMRACVEHW 552
Query: 551 NDSG---ILKEIMQHKLVFIETQDVVETTLALDNYRKACDC--------GRGAVFFSVAR 599
++G I + I K +E E A + A + GA FF+V R
Sbjct: 553 RNTGTPSIWERICASKHAVVEPSGKEEFREAFKEFNDALEATPGGGAGGRNGAAFFAVCR 612
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPF 623
GKV+EGIDF GR V++ G+P+
Sbjct: 613 GKVSEGIDFADKAGRCVVLTGIPY 636
>gi|354492614|ref|XP_003508442.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Cricetulus griseus]
Length = 771
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
VV S + D I P+++ G + + R P + G++L + ++VP G+
Sbjct: 507 VVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRDLPQMMEETGRVLCNLCNVVPGGV 566
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA--CDCGR- 590
VCFF SY Y+ +I A W+ +G+L + K +F E + + L Y K C CG+
Sbjct: 567 VCFFPSYEYLRQIHAHWDKTGLLARLSVKKKLFQEPKRASQVEQVLMAYSKCIMC-CGQA 625
Query: 591 -----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF--- 642
GA+ SV GK++EGI+F GR V+M G+P+ S L ++ YL T
Sbjct: 626 GGHLTGALLLSVVAGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRT 685
Query: 643 --QIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
Q G L + ++ Q +GR IR + D+ ++F D RY+R +KLP WI
Sbjct: 686 QGQAPPGKVLVENLCMKAVNQSIGRAIRHQRDFASIVFLDHRYARPPVLAKLPAWI---- 741
Query: 700 RD-AHLNLSTDMALHIAREFLRKMAQP 725
RD + + A R+F R+ AQP
Sbjct: 742 RDRVEVKATFGPAFAALRKFHREKAQP 768
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V + +
Sbjct: 222 TKIYYCSRTHSQLAQ------FIHEVQKSPFGKETRLVSLG--SRQNLCVNEDVKSLGSV 273
Query: 128 DSVDAAC-------RKRTASWVRALAAENPNIETCEFFENYEKAA---SAAVLPPGVYTL 177
++ C ++T + I+T F N+E+ +L V +
Sbjct: 274 QLMNDRCVDMQRSKHEKTGAGEDMPKKRRRRIQTSCPFHNHEQMQLLRDEILLE--VKDM 331
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+ L A GK+ CPY+ +R + A +VV Y LL +Q + VV+ DEAH
Sbjct: 332 EQLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQ-VVIIDEAH 390
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
N+ + S V L + S++ Q +ER+ RL+A+
Sbjct: 391 NLIDTITSIYSTEVNGSQL---CQAYSQLLQYMERY----GKRLKAK 430
>gi|297597115|ref|NP_001043456.2| Os01g0592900 [Oryza sativa Japonica Group]
gi|53791584|dbj|BAD52706.1| DEAH helicase isoform 5-like [Oryza sativa Japonica Group]
gi|255673416|dbj|BAF05370.2| Os01g0592900 [Oryza sativa Japonica Group]
Length = 876
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 430 VLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L C + LA++ +S+++TSGTLSP+D LN V + D I
Sbjct: 300 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIASDQI 359
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ G P+++ + R + G +V IVPDG++ FF SYS MD+ I
Sbjct: 360 WVGVVPVGPSGHPLNSSYRTRETLKYKQELGITIVNFARIVPDGLLVFFPSYSMMDKCIN 419
Query: 549 TWNDSG---------ILKEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSV 597
W D I + I +HK IE + A+++Y GA+FF+V
Sbjct: 420 CWKDRNHENSSDEHTIWQRICKHKQPVIEPRQSSNFPNAIEDYAAKLRDSSTTGAIFFAV 479
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL--------RDTFQIKEGDF 649
RGKV+EG+DF GR VI+ G+PF + + +YL +++ + ++
Sbjct: 480 CRGKVSEGLDFADRAGRAVIVTGMPFATPTDPKVRLKRDYLDKLGSASNKNSKALTGEEW 539
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q VGRVIR + DYG +I+ D+R+ + +S++ W+ +++
Sbjct: 540 YVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWQNYQSQMSYWLRPYIK 590
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 18/143 (12%)
Query: 109 LSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAENPNIETCEFFENYEKAA 165
L SR+ +C++ V R +A C+KR W R + EF N +
Sbjct: 4 LGSREQMCIHEEVSKLRGRQQNNACHYLCKKR---WCRH------HNSVAEFMRNNSELG 54
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
S A ++DL G+ +G CPY+++R + + +++ Y YL+DP ++
Sbjct: 55 SEAC------DIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIP 108
Query: 226 QKESVVVFDEAHNIDNVCIEALS 248
+V++FDEAHN++++C +A S
Sbjct: 109 WDNAVLIFDEAHNLESICADAAS 131
>gi|452981101|gb|EME80861.1| hypothetical protein MYCFIDRAFT_20311, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 788
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 156/652 (23%), Positives = 273/652 (41%), Gaps = 89/652 (13%)
Query: 70 LIYCTRTVHEMEKTLAELKLLH-----------NYQTRHLGPAAKILAIGLSSRKNLCVN 118
+ +C+RT ++ + + ELK + Q+ L K L +G SRKNLC+N
Sbjct: 192 VFFCSRTHSQLSQFIGELKRVSLPPGLPPEDNTGEQSSKLTEELKHLTLG--SRKNLCIN 249
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP------P 172
+V +++ C + + + C F K VL
Sbjct: 250 PKVNKLAGLTAINERC-------IELQQSNRAGDKKCSFLPT--KDQQDVVLDFRDHALS 300
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+ ++DL G + CPY+ +R + A + S + L + G VVV
Sbjct: 301 RIRDIEDLAKLGSKLELCPYYASRAGIGPAEM---SAREALGISLKG---------HVVV 348
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI-ERFKATDAGRLRAEYNRLVEG 291
DEAHN+ N S + L A L Q+ R K ++ + + R+++
Sbjct: 349 IDEAHNLMNAVEGIHSARITENQLRRAKEGLITYLQKFRNRLKGSNRTYV-TQVVRVIDS 407
Query: 292 L-ALRGNLPNAWLS-NPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEK 349
L + ++ + +S N PS +L I L +L +Y+ E++ K
Sbjct: 408 LLSFVASVKDHNMSGNVTSPSALLAGKAVDQIN--------LSKLSRYID---ESKLARK 456
Query: 350 -EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTY 408
EG ++FVA + T+ + +LM H+Q+ L+
Sbjct: 457 VEGYIAFVAQSDTAIKKEPSTIHHAAADVPTLM------------HLQSF--LLCLMNPS 502
Query: 409 TRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRL 468
G + + + ++ L L + S + + + ++V++ GT+SP++ Y +
Sbjct: 503 KEGRFL----WSKESGNVEVQYLLL---NGSEHFRGIVEDARAVILAGGTMSPMEEYKQE 555
Query: 469 LNFHPVVSRSFKMSLTRDCICPMVL----TRGSDQLPVSTKFDMRSDPGVARNYGKLLVE 524
L P ++ K I P L Q + F R+D R G+ L++
Sbjct: 556 L--FPYLTNEIKTFSCGHLIPPGNLFVRAISADSQGRLDFSFKSRNDTTAMR-LGQALIK 612
Query: 525 MVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV-VETTLALDNYR 583
+ S V G+V FF SYSY++ ++ TW ++ + K +F +++ V E T
Sbjct: 613 IASKVQGGMVVFFPSYSYLETVLRTWTSQPLIPPLSSLKPLFSDSRSVSAEETFRSFTSA 672
Query: 584 KACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ 643
+ RGA+ FSV GK++EGI+F GR V++ G+P+ + L A++EYL
Sbjct: 673 IHTNPSRGALLFSVIGGKLSEGINFSDDLGRCVVVVGLPYPNLQAPDLKAKMEYL----G 728
Query: 644 IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+ G++ +R Q +GRVIR K D+ ++ D R+ + KLPGWI
Sbjct: 729 ARGGEYAENLCMRSVNQAIGRVIRHKGDWASILLFDARFEDLRIKKKLPGWI 780
>gi|156379412|ref|XP_001631451.1| predicted protein [Nematostella vectensis]
gi|156218492|gb|EDO39388.1| predicted protein [Nematostella vectensis]
Length = 1082
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 15/279 (5%)
Query: 435 CHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVL 493
C A+K + + SV++TSGTLSP++ + + + + + + V+
Sbjct: 458 CFSPGHAMKDLMSQGVSSVILTSGTLSPLNSFTAEMQIPFPIRLENPHVIEKHQMMVAVV 517
Query: 494 TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
T+ D +++ ++ RS PG G + +P+G++ FF SY M++ + W ++
Sbjct: 518 TKAPDGATLNSSYEFRSTPGYMTGLGNTIANFARTIPNGLLVFFPSYPVMNKCLEHWQNT 577
Query: 554 GILKEIMQHKLVFIETQ---DVVETTLALDNYRKACDCG-RGAVFFSVARGKVAEGIDFD 609
GI + Q+K +F E + D V+T D Y K D GA FF+V RGKV+EG+DF
Sbjct: 578 GIWARLSQYKPMFAEPRGKGDFVQTM--EDFYAKINDPSLNGATFFAVCRGKVSEGLDFS 635
Query: 610 RHYGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIK---EGDFLTFDALRQAAQC 661
GR V++ G+PF + + ++ +L +D IK ++ A R Q
Sbjct: 636 DINGRAVVITGLPFPPMMDAKVKLKMSFLDEMSRKDKSAIKGLTGREWYRQQASRAVNQA 695
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
VGRVIR + D+G ++ D R++ D +LP W+ ++
Sbjct: 696 VGRVIRHRQDFGAILLCDVRFTYPDALRELPSWVKPQVK 734
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 72/288 (25%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLI----TSYVL-- 61
V V FP+ Y Q +YM ++ L + + +LE PTGTGKT+ LL SYV
Sbjct: 7 VDVDFPF-KPYDCQVAYMEKVIECLQTRKNAVLESPTGTGKTLCLLCATLAWRQSYVANL 65
Query: 62 -----------------------------------------SKPENPVKLIYCTRTVHEM 80
S E P K+IY +RT ++
Sbjct: 66 QLQQRGLCAAKEEEDGFQKSLGNKLAEAASGTWDDSCSNKGSNFEIP-KIIYASRTHSQL 124
Query: 81 EKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTAS 140
+ + ELK Y+ R + IG SR+ LC+NS VL ++ + CR + +
Sbjct: 125 SQAVQELKATV-YRPR-------VSIIG--SREQLCINSDVLKQDSNSAKVHMCRAKVTA 174
Query: 141 WVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQ 200
TC F+ N E S + ++DL G++ CPY++AR +
Sbjct: 175 ------------RTCHFYNNLEGNKSNPAFTTEILDIEDLVRLGQKHKVCPYYMARELKT 222
Query: 201 FANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
A+++ Y YLLDPK + ++ S+VVFDEAHN++ VC E +S
Sbjct: 223 SADIIFMPYNYLLDPKSRKAHNLDISG-SIVVFDEAHNLEKVCEETVS 269
>gi|336466792|gb|EGO54956.1| hypothetical protein NEUTE1DRAFT_147626 [Neurospora tetrasperma
FGSC 2508]
gi|350288617|gb|EGZ69853.1| DNA repair helicase [Neurospora tetrasperma FGSC 2509]
Length = 1068
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 160/649 (24%), Positives = 264/649 (40%), Gaps = 124/649 (19%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLH--------NYQTRHLGPAAKILA-IGLSSRKNL 115
E +K+ Y +RT ++ + + EL+ N Q PA +I+ I LSSR+ L
Sbjct: 331 EEEIKIFYTSRTHSQLTQFIQELRRPEFPASVPTPNPQEE---PAKEIVKQIPLSSRQKL 387
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE--------KAASA 167
C+N V N+ AA +R S ++ + P + C + N + +
Sbjct: 388 CINPTV----NKLGTLAAINERCQSLQQS---KTPKEQRCPYLPNAANLKATHEFRDTAL 440
Query: 168 AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK 227
A LP ++DL GKQ CPY+ +R + A V+ Y LL + +++
Sbjct: 441 ATLP----DIEDLYQTGKQLQICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIKLEG 496
Query: 228 ESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNR 287
++V+ DEAHNI + + ++ L+ A +L Q + + + A+ R
Sbjct: 497 -NIVIIDEAHNIMDAVSNVHAAEIKYTDLKRAKLSLGMYYQRFHQKLTGENKVMVAQLQR 555
Query: 288 LVE--GLALRGNLPNAWLSNPALPSDI-------LKEAVPGNIRRAEHFLHVLRRLVQYL 338
+VE G+ ++ L A L + A I LK I L +L++Y+
Sbjct: 556 VVEALGVYIKTKLDKAALGHKADQEGIVLDTSLLLKTGGADQIN--------LYKLIRYV 607
Query: 339 RGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDE------- 391
+E ++F I + + +C E E DTD+
Sbjct: 608 ----------QESKLAF--KIEGY-------ISYCEE---------EGRDTDDEEAETEI 639
Query: 392 --------FLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVK 443
LH T+C F T + + I E + D L + A
Sbjct: 640 KARQGRPPVLH--TLCSFLTALTNLSSEGRIFYEKIPPPRGELQDMKLSYMLLSPTHAFS 697
Query: 444 PVFDRFQSVVITSGTLSPIDLYPRLL--NFHP--VVSRSFKMSLTRDCICPMVLTRGSDQ 499
+ + ++V++ GT+SP + Y L + P + + S + D +C L +
Sbjct: 698 SIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPDNLCVWTLGSIAPN 757
Query: 500 LPVST---------KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
V T F RS+P + G +L+ + S+VPDG+V FF SY Y++E+I W
Sbjct: 758 PKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFFPSYGYLEEVIGVW 817
Query: 551 -------NDSGILKEIMQHKLVFIETQ-DVVETTLAL------DNYRKACDCG---RGAV 593
I + + K +FI+++ + E TL R G +GA+
Sbjct: 818 KTHEQAMGPKTIWERLESKKALFIDSKTESSEQTLQKYSDVIHSEVRPLSPAGSRVKGAM 877
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF 642
SV GK++EGI+F GR VI+ G+P+ S LAR EYL F
Sbjct: 878 LLSVIGGKMSEGINFSDRLGRCVIVVGMPYPNPHSPEWLARREYLEANF 926
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
RD+ Q F LR Q +GR IR + DY ++ D R+ + R+KLPGWI
Sbjct: 981 RDSHQ-----FYENATLRAVNQSIGRAIRHQNDYAAIVLIDNRFEKEHVRAKLPGWI 1032
>gi|326470360|gb|EGD94369.1| DNA repair helicase (rad3) [Trichophyton tonsurans CBS 112818]
Length = 847
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 31/298 (10%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLY-PRLLNFHP---VVSRSFKMSLTRDCICPMV 492
D + K + + ++V++ GT+ P+D Y LL++ P + + ++ + +D + +
Sbjct: 534 DPTSRFKELVEDARAVILAGGTMEPMDDYVNHLLSYVPRDKIKTFTYGHVIPKDNLMAIP 593
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
+ RG D + FD R + + G+ + SI+PDG+V FF SY Y+ ++ W+
Sbjct: 594 IDRGMDGTEFNFTFDQRRSEKMIISLGRTISRYCSIIPDGVVVFFPSYDYLATVLKVWSS 653
Query: 553 SGILKEIMQH-KLVFIETQDVVETTLA----------LDNYRKACDCGRGAVFFSVARGK 601
S + + K +F E Q T + L Y + D G+G + SV GK
Sbjct: 654 SSGILSSLSRLKPIFHEPQSTGSTNGSANANTNTDSLLSQYSASVDAGKGGLLLSVMGGK 713
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEGD------------ 648
++EGI+F GR VI+ G+PF T + I A+L+++ + +++ +
Sbjct: 714 LSEGINFSDALGRGVIVVGLPFPNTRNAIWQAKLQHVEKKAYELADPSRSEERRACGKAA 773
Query: 649 ---FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
F +R QC+GR IR K DY ++ D+RY KLPGWI L H
Sbjct: 774 SRAFYENTCMRTVNQCIGRAIRHKGDYAAILMIDRRYQTERIHGKLPGWIRGSLLKGH 831
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 46 TGKTIALLSLITSYV----LSKPENPVKLIYCTRTVHEMEKTLAELK-----------LL 90
+ T+ALL + L + VK+IYC+RT ++ + E++ L
Sbjct: 154 SSDTLALLEKLKGPARQIELEEDGESVKIIYCSRTHSQLIQFAQEMRRVMPISSIPPELD 213
Query: 91 HNYQTRHLG----PAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
N + G I L+SRK LC+N V + + +++ C L
Sbjct: 214 DNLEEEKKGNQQDEGEWIKHTPLASRKTLCINPSVRSLSSATAINERC----------LE 263
Query: 147 AENPNI---ETCEFFENYEKAASAAV----LPPGVYTLQDLRAFGKQQGWCPYFLARHMV 199
+ PN+ C + + + L V ++DL G + CPY+ AR +
Sbjct: 264 IQRPNVAAEHKCPYLPTKDNELKTSQFQDHLLARVNDIEDLPPLGTKMSICPYYAARTAM 323
Query: 200 QFA--NVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLE 257
+ + VV Y LL ++ K SV+V DEAHN+ + + SV+V L+
Sbjct: 324 RASATEVVTLPYPLLLQQSAREALNLSA-KNSVIVIDEAHNLIDAIVNIHSVTVSLSQLK 382
Query: 258 GATRNLSRINQEIERFKATDAGRLRAEYNRLV 289
A L++I RFK+ GR R +L+
Sbjct: 383 TA---LAQITTYARRFKSRLKGRNRVYIAQLI 411
>gi|301629712|ref|XP_002943978.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Xenopus (Silurana) tropicalis]
Length = 688
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 133/260 (51%), Gaps = 12/260 (4%)
Query: 452 VVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
V++TSGTL P+ + + VS + + I ++ RG D +S+ +D R
Sbjct: 72 VILTSGTLCPLSSFTMEMQIPFPVSLENPHVIDKHQIWVGIVPRGPDGSQLSSSYDRRFS 131
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQD 571
+ GK + + +VP G++ FF SY +D+ I W + G+ +I K +F+E +
Sbjct: 132 EEYLSSLGKTIGNIARVVPHGLLVFFPSYPVLDKSIEFWKERGLSAKIDDVKPMFVEPRG 191
Query: 572 VVETTLALDNYRKACDC--GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 629
T +D Y + G GA F +V RGK +EG+DF + GR VI+ G+PF +
Sbjct: 192 KGSFTEVIDAYYEKIRSANGSGASFLAVCRGKASEGLDFADNNGRGVIITGLPFPPRMDP 251
Query: 630 ILLARLEYLRDTFQIKEG---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADK 680
++ ++++L D + +G ++ A R Q +GRVIR + DYG + D
Sbjct: 252 RVVLKMQFL-DEMRRSQGSAGLYLSGQEWYRQQASRAVNQAIGRVIRHRNDYGAIFLCDH 310
Query: 681 RYSRHDKRSKLPGWILSHLR 700
R+++ D R++LP W+ ++R
Sbjct: 311 RFNQSDARAQLPSWVRPYVR 330
>gi|319411548|emb|CBQ73592.1| related to CHL1-protein of the DEAH box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 34/286 (11%)
Query: 443 KPVFDRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSD 498
K + D +SV++ GT+ P+ D +LL F P +V+ S + + VL+
Sbjct: 622 KSLVDEARSVILAGGTMEPMSDFRQQLLPFVPPDRLVTFSCGHVIPPSNLMVSVLSASPK 681
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS---GI 555
LP KFD R + + G+ L + +I+P G+V F SY+++D+++A W D+ G+
Sbjct: 682 GLPFEFKFDSRDNLELVDELGRTLANLCNIIPAGLVVFVPSYAFLDKVMARWKDAASGGV 741
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG---------AVFFSVARGKVAEGI 606
L+ + K +F E + +E L Y A A+ F+V K++EGI
Sbjct: 742 LQRLGSKKKIFTEPKTTMEVDKVLGEYTAAIRAKDAKTGAAGGGGAIMFAVVGAKLSEGI 801
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAA------- 659
+F R V+M G+PF S L R++Y+R+ +K T + +AA
Sbjct: 802 NFSDDLARGVVMVGMPFANMHSPELAERMKYVRE-LGVKSESNGTSSSTNKAAIDPGHEL 860
Query: 660 ----------QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q +GR +R + DY +I D+RY+R + R +LPGWI
Sbjct: 861 YTNLCMKAVNQSIGRAVRHQNDYAALILLDRRYARPEIRQRLPGWI 906
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLG-PAAKILAIGLSSRKNLCVNSRV 121
+PE ++IY +RT ++ + +AELK Q L + IGL SRK +C+N V
Sbjct: 239 EPETLPRVIYASRTHSQLSQFVAELKKTLFGQVDILDFEKLPVRTIGLGSRKQMCINEEV 298
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP------PGVY 175
R A +R ++A + C +++ A VL V
Sbjct: 299 QRI-GRSRGSEAMNERCLELMKAKKGKT----KCPSLPPFDQVGRAQVLEFRDAAMAEVG 353
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLL--DPKVAGIISKEMQKESVVVF 233
++DL GKQ CPYF AR + A +V Y LL D + A IS E +V+
Sbjct: 354 DIEDLVQLGKQTKTCPYFAARSSAKQAELVTLPYNLLLQKDARNALGISLE---GCIVLI 410
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
DEAHN+ + + SV+V + + A++ +I+ +E+F
Sbjct: 411 DEAHNLIDTILSTHSVTVDSRQIAQASK---QIDTYLEKF 447
>gi|195132879|ref|XP_002010867.1| GI21782 [Drosophila mojavensis]
gi|193907655|gb|EDW06522.1| GI21782 [Drosophila mojavensis]
Length = 852
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 5/260 (1%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+ ++++I GT+ P +L +L P VV R + + D + P +L G
Sbjct: 571 IVKEARALIIAGGTMRPTQELTEQLFAHCPERVVERFYDHVVPADAVLPFILPTGPTGAR 630
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ + R+ P + + +L + ++P G+VCF SY+Y+D + SG L+ I Q
Sbjct: 631 LCFSYAERTSPAMLKELSMVLQNLCGVLPAGVVCFLPSYAYLDTVYGHLEQSGALQRIGQ 690
Query: 562 HKLVFIETQDVVETTLALDNYRKACD-CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
K +F ET L Y A D GA+ SV GK++EG++F GR VI+ G
Sbjct: 691 RKRIFRETAGGAGVEQLLQQYANAIDQTAGGALLLSVVGGKLSEGLNFADQLGRGVIVVG 750
Query: 621 VPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
+P+ S L R+ +L T G ++ ++ QC+GR +R DY + D
Sbjct: 751 LPYPNRTSPELKERMRHLDATLGNGAGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLD 810
Query: 680 KRYSRHDKRSKLPGWILSHL 699
+RY + KLP WI H+
Sbjct: 811 ERYGSERIQQKLPAWIARHI 830
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 31/221 (14%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
V++ +C+RT ++ + +AEL+ +T H + I L SR+ LC+N++V N
Sbjct: 193 VQIFFCSRTHSQLSQIVAELR-----KTPH---GQNVRCIALGSRQQLCINAQVRKLPNI 244
Query: 128 DSVDAACRKRTASWV--RALAAENPNIETCEFFEN--YEKAASAAVLPPGVYTLQDLRAF 183
++ C S + A++ + C + + ++ ++AA+ P + +++L A
Sbjct: 245 GLINERCLDMAQSKISANAISKSRQTLSRCVYKSSAQLQRLSNAALCEP--FDIEELVAE 302
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G G CPY+ R A +++ Y LL + ++ + ++++ DEAHN+ +
Sbjct: 303 GSACGGCPYYATRAAQSQAQLLLLPYPMLLQRSARQQLGLDL-RGAIIIVDEAHNLLDTI 361
Query: 244 IEALS-------VSVRRQTLEG---------ATRNLSRINQ 268
+ S + + +Q L G ++ NL RINQ
Sbjct: 362 AQLHSSELSLAQLQLAKQQLAGYKQRYARRLSSANLLRINQ 402
>gi|159118615|ref|XP_001709526.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
gi|157437643|gb|EDO81852.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
Length = 1059
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 125/272 (45%), Gaps = 24/272 (8%)
Query: 447 DRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGS--------- 497
+ S+V+TSGTL+P L SF +S++ CP ++ +
Sbjct: 628 ESVHSLVLTSGTLAPFSALQAELGL------SFGISVS----CPHIVPPSNYLFRAITAI 677
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
P+ + R + G L V V G + FF SY YM +++ +W G
Sbjct: 678 TGTPLLGIYKNRESKSYQKQLGYALQACVRGVVGGTLVFFPSYKYMAQVLDSWKADGTEA 737
Query: 558 EIMQH-----KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHY 612
E+ + +F+E + + YR +CD GR + F + RGK+AEGIDF +Y
Sbjct: 738 ELKSSTHGDPRDLFVEPLRQQDCNAVIKKYRDSCDAGRSPILFVICRGKLAEGIDFSNNY 797
Query: 613 GRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADY 672
R ++ +P+ +L A++++L +K GD+ + A R Q +GRV+R K DY
Sbjct: 798 CRCALVISLPYPNISDPLLKAKMDWLDKHSVLKGGDWYSVHAYRSVNQALGRVLRHKDDY 857
Query: 673 GMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
G M D+RYS R +L GW+ L L
Sbjct: 858 GCMFLLDQRYSIEISRKQLSGWLADQLVSTEL 889
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 59 YVLSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKIL---AIGLSSRKNL 115
+V +P P K++Y RT ++E+ + +LK H + G + L L SR+
Sbjct: 138 WVAERP--PPKILYAARTHAQIEQAIRQLKK-HVTISDASGDSRSFLLWPIAMLGSRRIF 194
Query: 116 CVNSR--VLAAENRDSVDAACRKRTAS-WVRALAAENPNIETCEFFENYEKAASAAVLPP 172
C+N R AA ++ AC+K R +++ + + + + Y S L
Sbjct: 195 CINERAHTYAAAANITLGMACKKLCDDRQCRYYSSDGDSDDLAQKYREYYCENSNGRLD- 253
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
L+D + K + CPY+L R +V A VV Y Y+L K M + S+++
Sbjct: 254 ---DLEDFLGYCKNESRCPYYLGRALVPQARVVTAPYNYILSSKNRTSELSSMLRNSILL 310
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
DE HNI C + S SV T L + ++EI+ + A + N+ +
Sbjct: 311 VDEGHNIGQACCDTFSGSV-------TTDALLKASEEIQYLQKVAAAQRMGPGNK-AATI 362
Query: 293 ALRGNLPNAWLS--NPALPS 310
L GN WLS NP P+
Sbjct: 363 ELEGN----WLSKTNPCGPA 378
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
+ K++ V FP++ YP Q YM L AL+ K + LLE PTGTGKT++LL
Sbjct: 4 MLKIKGVHFQFPFEP-YPSQIEYMSSLITALNKKENALLESPTGTGKTLSLL 54
>gi|164429296|ref|XP_001728521.1| hypothetical protein NCU11409 [Neurospora crassa OR74A]
gi|206557740|sp|A7UXD4.1|CHL1_NEUCR RecName: Full=ATP-dependent RNA helicase chl-1; AltName:
Full=Chromosome loss protein 1
gi|157073424|gb|EDO65430.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1073
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 155/655 (23%), Positives = 258/655 (39%), Gaps = 136/655 (20%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLH--------NYQTRHLGPAAKILA-IGLSSRKNL 115
E +K+ Y +RT ++ + + EL+ N Q + PA +I+ I LSSR+ L
Sbjct: 331 EEEIKIFYTSRTHSQLTQFIQELRRPEFPASVPTPNPQEK---PAKEIVKQIPLSSRQKL 387
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE--------KAASA 167
C+N V N+ AA +R S + + P + C + N + +
Sbjct: 388 CINPTV----NKLGTLAAINERCQSLQQP---KTPKDQRCPYLPNAANLKATHEFRDTAL 440
Query: 168 AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK 227
A LP ++DL GKQ CPY+ +R + A V+ Y LL + ++
Sbjct: 441 ATLP----DIEDLYQTGKQLQICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIRLEG 496
Query: 228 ESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNR 287
++V+ DEAHNI + + ++ L+ A +L Q + + + A+ R
Sbjct: 497 -NIVIIDEAHNIMDAVSNVHAAEIKYTDLKRAKLSLGMYYQRFHQKLTGENKVMVAQLQR 555
Query: 288 LVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETE-- 345
+VE L + YL+ +L+
Sbjct: 556 VVEALGV------------------------------------------YLKTKLDKAAL 573
Query: 346 --NVEKEGPVSFVASITAHAGIDQ----KTLRFCYERLHSLMLTLEIT-------DTDE- 391
++EG V + + G DQ K +R+ E + + I+ DTD+
Sbjct: 574 GLKADQEGIVLDTSLLLKTGGADQINLYKLIRYVQESKLAFKIEGYISYCEEEGRDTDDE 633
Query: 392 --------------FLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHD 437
LH T+C F T + + I E + D L
Sbjct: 634 EAETEIKARQGRPPVLH--TLCSFLTALTNLSSEGRIFYEKIPPPRGELQDMKLSYMLLS 691
Query: 438 ASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL--NFHP--VVSRSFKMSLTRDCICPMVL 493
+ A + + ++V++ GT+SP + Y L + P + + S + D +C L
Sbjct: 692 PTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPDNLCVWTL 751
Query: 494 TRGSDQLPVST---------KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ V T F RS+P + G +L+ + S+VPDG+V FF SY Y++
Sbjct: 752 GSIAPNPKVDTGIGEDCFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFFPSYGYLE 811
Query: 545 EIIATW-------NDSGILKEIMQHKLVFIETQ-DVVETTLAL------DNYRKACDCG- 589
E+I W I + + K +FI+++ + E TL R G
Sbjct: 812 EVIGVWKTHEQAMGPKTIWERLESKKALFIDSKTESSEQTLQKYSDVIHSEVRPLSPAGS 871
Query: 590 --RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF 642
+GA+ SV GK++EGI+F GR V++ G+P+ S LAR EYL F
Sbjct: 872 RVKGAMLLSVIGGKMSEGINFSDRLGRCVVVVGMPYPNPHSPEWLARREYLEANF 926
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 639 RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
RD+ Q F LR Q +GR IR + DY ++ D R+ + R+KLPGWI
Sbjct: 981 RDSHQ-----FYENATLRAVNQSIGRAIRHQNDYAAIVLIDNRFEKEHVRAKLPGWI 1032
>gi|348532245|ref|XP_003453617.1| PREDICTED: Fanconi anemia group J protein [Oreochromis niloticus]
Length = 1236
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 168/735 (22%), Positives = 274/735 (37%), Gaps = 152/735 (20%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ + TRT ++ + ELK +T + G IL SSR + CVN V+ NR+
Sbjct: 260 KIFFGTRTHKQITQITHELK-----RTVYSGVPMTIL----SSRDHTCVNPDVVPHTNRN 310
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP-----GVYTLQDLRAF 183
C+ E + +C ++ ++ L + ++DL
Sbjct: 311 E---RCKD---------LLEAKDGRSCRYYHGVQRMRDQNTLQHVHGLRAAWDIEDLVTL 358
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
GK+ C YF AR ++Q A ++ Y YLLDP + + +++ + ++V DEAHNI+
Sbjct: 359 GKRLRSCSYFAARELMQSAWIIFCPYNYLLDPMIRESMEIDLEGQ-ILVLDEAHNIE--- 414
Query: 244 IEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWL 303
D R A Y + L +
Sbjct: 415 ---------------------------------DCARESASYTLDYKSLLMS-------- 433
Query: 304 SNPALPSDILKEAVPGNIRRAEH-----FLHVLRRLVQYLRGRLETENVEKEGPV---SF 355
D L V NIRR++H F + L +Q + + E G V
Sbjct: 434 ------RDELDSMVNNNIRRSKHELLRGFCYSLINWIQESQSLMSERGYETAGKVWSGKE 487
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLE----ITDTDEFLHIQTI------------- 398
+ I GI T + L +++ E + ++ + I TI
Sbjct: 488 IVGIFHTLGITADTFNILKQNLAAVLEKEEHAGVVNGREDVVQIPTISPPTATVLKNLFM 547
Query: 399 ---------CDFA-----TLVGTYT------------RGFSIIIEPFDERMP-HIPDPVL 431
C FA L +Y +GF I+ P R + VL
Sbjct: 548 VLDFLFRDSCRFADDYRVALQKSYAWTNQVPPDVPNAQGF--IVRPRGRRQTVRVKTEVL 605
Query: 432 QLS--CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
LS C + ++A + S+V+TSGTLSP+D + L + + + +
Sbjct: 606 TLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMDSFSSELGVKFSIQLEANHVINKSQVW 665
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
+ G + F G LL+ + ++ G++CF SY +D++
Sbjct: 666 VGTVGAGPQGRKLCATFQNAETYAFQDEVGGLLLHVCQVMAKGVLCFLPSYKMLDKLRDR 725
Query: 550 WNDSGILKEIMQHKLVFIETQ------DVVETTLALDNYRKACDCGRGAVFFSVARGKVA 603
W +G+ ++ Q K V E + D E + K C+ GA+ +V RGKV+
Sbjct: 726 WTKTGLWDKLEQQKTVITEPRGGGGKGDFDELLHTYYSAIKYCEEKDGALLIAVCRGKVS 785
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL------TFDALRQ 657
EG+DF R V+ G+PF K L L+ + K L A R
Sbjct: 786 EGLDFTDDNARAVVAVGIPFPNI--KDLQVELKMKYNDLHSKSRGLLPGSRWYEIQAYRA 843
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKR--SKLPGWILSHLRDAHLNLSTDMALHIA 715
Q +GR IR + D+G ++ D RY + + + L W+ L H S M +A
Sbjct: 844 LNQALGRCIRHRNDWGALVLVDDRYRNNPNKYITGLSKWV-RQLVQHHSTFSDAMQSLVA 902
Query: 716 -REFLRKM-AQPYDK 728
+ +KM P D+
Sbjct: 903 FSQVQKKMDGAPADR 917
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+ + V ++FP YP Q + M + R L+ +CLLE PTG+GK++ALL + +
Sbjct: 8 YTIGGVKIHFPC-KAYPSQLAMMNLIVRGLNTGQYCLLESPTGSGKSLALLCSALGWQHA 66
Query: 63 KPENPVKL 70
+ P KL
Sbjct: 67 QFGKPAKL 74
>gi|346326897|gb|EGX96493.1| DNA helicase, putative [Cordyceps militaris CM01]
Length = 774
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 40/287 (13%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL--------TRDCICPMVLTRGSDQLP 501
++V++ GT+SP D Y + P++ S +L T C+ + +R P
Sbjct: 467 RAVILAGGTMSPFDDYKD--HLFPMLDESKITTLSCGHVIPSTNLCVRTLAASRAGGP-P 523
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGI 555
+ R D + G ++ M S+VPDG+V FF SY Y+DE++ W +
Sbjct: 524 FEFSYQRRGDQEMIGQLGLAILNMCSVVPDGVVIFFPSYGYLDEVVQVWKTKRAGDAQST 583
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKA---CDCGRGAVFFSVARGKVAEGIDFDRHY 612
+ + K +F ET+ + L Y +A G GA+ SV GK++EGI+F
Sbjct: 584 WERLKSKKTIFQETKGASSDEV-LQKYSEAIFGAQAGGGALLLSVVGGKMSEGINFSDRL 642
Query: 613 GRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK-------------------EGDFLTFD 653
GRLV + G+P+ S A++EY+ + + + DF
Sbjct: 643 GRLVAVVGLPYPNIASPDWKAKMEYIESSTRTRLLERGGIPPAEATSRAKQTARDFYENS 702
Query: 654 ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+R Q +GR IR K DY ++ D+RY+ RSKLPGWI L+
Sbjct: 703 CMRAVNQSIGRAIRHKGDYAAIVLLDRRYTSERIRSKLPGWIQGGLQ 749
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 46/221 (20%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK---LLHNYQTRHLGPAAK-----ILAIGLSSRKNLC 116
E +K+ Y +RT ++ + +AEL+ + G AK + + LSSR+ LC
Sbjct: 111 EEEIKIYYTSRTHSQLSQFIAELRRPTFPASLPQDLSGSGAKTQDELVKLLPLSSRQKLC 170
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE--------KAASAA 168
+N V + +++ C A + + CEF E + + A
Sbjct: 171 INPSVSRLKTVQAINDRC---------AELQQPKSGRKCEFVPREELLAQTHEFRDTALA 221
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
+P ++DL GK CPY+ +R + A +V Y LL + +++
Sbjct: 222 TVP----DIEDLYQLGKALRVCPYYASRTALPGAEIVTLPYPLLLQKSARDALGIKLEG- 276
Query: 229 SVVVFDEAHNI----DNV------------CIEALSVSVRR 253
+VV+ DEAHNI NV C E L V VR+
Sbjct: 277 NVVIVDEAHNIMDAVSNVYAADLKLSDLRRCREMLGVYVRK 317
>gi|363728123|ref|XP_416375.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Gallus
gallus]
Length = 941
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 18/274 (6%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-----VSRSFKMSLTRDCICPMVLTRGSD 498
V ++V+I GT+ P+ D +LL++ V V S + + I P++L G
Sbjct: 647 VVKECRAVIIAGGTMQPVADFREQLLSYAGVDPARIVEFSCGHVIPPENILPIILCSGPS 706
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W +G+L
Sbjct: 707 NQQLEFTYQTRDLPQMMDETGRILCNLCNVVPGGVVCFFPSYDYEKQVYAHWEKTGLLTR 766
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K CG+ GA+ SV GK++EGI+F
Sbjct: 767 LATKKKIFQEPKKANQVEQVLAEYAKCIKRCGQAGGQMTGALLLSVVGGKMSEGINFSDD 826
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFDALRQAAQCVGRVI 666
GR VIM G+P+ S L ++ +L R Q + ++ Q +GR I
Sbjct: 827 LGRCVIMVGMPYPNIKSPELQEKMTWLDKTMPRSASQAPSRVLIENLCMKAVNQSIGRAI 886
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R + DY ++ D RY+R +KLP WI ++
Sbjct: 887 RHQKDYASILLLDHRYARPAILNKLPQWIRERIQ 920
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 50/208 (24%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV--LAA- 124
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V L A
Sbjct: 261 TKIYYCSRTHSQLSQ------FVHEVQKSPFGKDTRLVSLG--SRQNLCVNEEVRRLGAL 312
Query: 125 ---------------ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA--SA 167
E + + +KR S C F+ +YE+
Sbjct: 313 QLINDRCTEMQKNKHEKKSDAEVEGKKRRVSRT-----------VCPFY-SYEQMQFLRD 360
Query: 168 AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKE 224
VL V ++ L GK+ CPY+ +R+ + A +VV YQ LL AGII
Sbjct: 361 EVLVE-VKDIEQLVTLGKETKACPYYGSRYAIPAAQLVVLPYQMLLHEATRSAAGIIL-- 417
Query: 225 MQKESVVVFDEAHN-IDNV-CIEALSVS 250
K+ VV+ DEAHN ID + CI + VS
Sbjct: 418 --KDQVVIIDEAHNLIDTITCIYSAEVS 443
>gi|410963605|ref|XP_003988355.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Felis catus]
Length = 907
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 137/301 (45%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+V+ G
Sbjct: 610 VVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGPS 669
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W+ SG+L
Sbjct: 670 SQQLEFTYQKRELPQMMDETGRILYNLCNVVPGGVVCFFPSYEYQRQVHAHWDKSGLLAR 729
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCG-------RGAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y + C GA+ SV GK++EGI+F
Sbjct: 730 LAVRKKIFQEPKRANQVEQVLLEYSRCIKCCGHAGGAVTGALLLSVVGGKMSEGINFSDD 789
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T Q G L + ++ Q +GR
Sbjct: 790 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRIPGQPPPGKALVENLCMKAVNQSIGRA 849
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D RY+R KLP WI RD + + A R+F R+
Sbjct: 850 IRHQKDFASIVLLDHRYARPPVLGKLPAWI----RDRVEVKATFGPAFAAMRKFHRERPG 905
Query: 725 P 725
P
Sbjct: 906 P 906
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLC+N V +
Sbjct: 227 TKIYYCSRTHSQL------AQFVHEVQRSPFGKDTRLVSLG--SRQNLCINEDVKNLGSA 278
Query: 128 DSVDAAC----RKRTASWVRALAAENP------NIETCEFFENYEKAASAAVLPPGVYTL 177
++ C R + RA E P + C F+ + + GV +
Sbjct: 279 QLINDRCMEMQRSKHGKKSRA-EDEKPKRRRQEHQAACPFYSYEQLQLLRDEVLVGVKDI 337
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+ L + GK+ CPY+ +R + A +VV YQ LL +Q + VVV DEAH
Sbjct: 338 EQLVSLGKEARACPYYGSRFAIPAAQLVVLPYQMLLHGATRQAAGIRLQGQ-VVVIDEAH 396
Query: 238 NI 239
N+
Sbjct: 397 NL 398
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 6 EDVTVYFPYD-NIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
ED ++FP+ Y Q +M EL R LDA + E PTGTGK+++L+ S++
Sbjct: 7 EDGGIHFPFPFTPYSIQKDFMAELYRVLDAGKIGIFESPTGTGKSLSLICGALSWL 62
>gi|353232615|emb|CCD79969.1| putative regulator of telomere elongation helicase 1 rtel1
[Schistosoma mansoni]
Length = 1165
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 159/324 (49%), Gaps = 32/324 (9%)
Query: 452 VVITSGTLSPIDLYPRLLNFH-PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
+++TSGTL P++ LN P+ R+ + + D + ++ RG D ++ + +R
Sbjct: 506 IILTSGTLYPVEPIEAELNLKFPITLRNPHV-INPDQLNLSIIPRGPDGEKLNATYSVRE 564
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ 570
+ G LL+++ +VP G++ FF SYS+M + I W D + +++ + K +FIE +
Sbjct: 565 TSAYRNSLGLLLIQLADVVPAGLLIFFPSYSFMSQCIEYWKDGDVYEKLSRSKHIFIEPR 624
Query: 571 DVVETTLALDNYRK-AC-DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+ + + YRK AC + GA+ F+V RG+V+EG+D + GR V + G+P+
Sbjct: 625 EKNQFNKIFNEYRKTACIENSVGAILFAVMRGRVSEGLDLADNAGRGVFILGIPYAPIHD 684
Query: 629 KILLARLEYLRDTF----------QIKEG---------DFLTFDALRQAAQCVGRVIRSK 669
+ ++ YL + F Q+++ + A R Q VGRVIR
Sbjct: 685 PRVSLKMAYLDEQFVKLKSNSTHDQLQKTLIDKYPTGRQWYNLQAWRAINQAVGRVIRHY 744
Query: 670 ADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYD-- 727
DYG++ D+R++ ++ + L GW+ + + + + ++ + EF R M Y
Sbjct: 745 KDYGIIYLCDERFASNNAQLNLAGWMQTKCKVYN---NVELVVKDTDEFFRNMRNKYPST 801
Query: 728 ----KAGSIGRKTLLSQADLEKMT 747
++ SI TL + + L +
Sbjct: 802 DRPLESTSIVNNTLTATSSLRSVN 825
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 52/292 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ V + FPY Y Q+ YM ++ +L+ H +LE PTGTGKT+ LL ++ L K
Sbjct: 6 IDGVEIDFPYQ-PYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAW-LDKQ 63
Query: 65 ENPVKLIYCTRTVHE-----------------MEKTLAELKLLHN-----YQTR-HLGPA 101
N V+LI T H+ + LA L ++N Y +R H A
Sbjct: 64 ANSVQLISATDAKHQNTMGKRPTSDNVDNALSHQNFLASLGKVNNGCKIIYASRTHSQLA 123
Query: 102 AKILAIG-----------LSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP 150
I A+ + SR LC+ V + E+ + ACR R +
Sbjct: 124 QAINALKGTVYSRRSVSVVGSRDQLCLLPDVTSLESNSAKIYACRMRVQT---------- 173
Query: 151 NIETCEFFENYEKAASAAVL---PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
TCE+F N++ + G+ ++DL +G++ CPYF++R + ++++
Sbjct: 174 --RTCEYFRNFDSKRDEILTNLKSEGIVDIEDLSNYGQKIKCCPYFISRELKTDSSLIFM 231
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGA 259
Y Y+LDP++ + + ++ + V+FDEAHNI+ VC +A SV++ L A
Sbjct: 232 PYNYVLDPRIRSLYNINLEN-TTVIFDEAHNIEQVCEDASSVTLSSALLASA 282
>gi|357622566|gb|EHJ73993.1| fanconi anemia group J protein [Danaus plexippus]
Length = 950
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSP---------IDLYPRLLNFHPVVSRSF 479
VL C +K + ++ +S+++TSGTL+P I + +L N H V S
Sbjct: 442 VLSYWCFSPGFGMKQLLEQNVRSIILTSGTLAPLKPLISELGIPIGVQLENPHIVKSNQI 501
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVS 539
+ ++ +G D +++ + R++P + G+ ++ ++PDG++ FF S
Sbjct: 502 HVK---------IIGQGPDSETLNSNYQNRNNPKYISSLGRTILSFSRVIPDGLLVFFPS 552
Query: 540 YSYMDEIIATWNDSGILKEIMQHKLVFIETQ--DVVETTLALDNYRKACD-CGRGAVFFS 596
Y M + W GI I K +F+E Q D + + D Y K D RGA F +
Sbjct: 553 YPIMTKCQEMWQAEGIWSSINSIKPIFVEPQRKDTFNSIIN-DYYSKIRDPNSRGACFMA 611
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFD--- 653
V RGKV+EG+DF GR VI+ G+PF ++ + +YL + ++ + ++L+ D
Sbjct: 612 VCRGKVSEGLDFADMNGRAVIITGLPFPPLKDPRIILKKKYLEE-LRVNQKEYLSGDEWY 670
Query: 654 ---ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
A R Q +GRVIR + DYG ++ D R++ +++L W+ H+
Sbjct: 671 SLEASRAVNQAIGRVIRHQNDYGAILLCDTRFNNPKLKNQLSAWLRDHI 719
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 62/284 (21%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP--- 64
+ V FP++ Y Q SYM ++ +L + +LE PTGTGKT++LL +++L K
Sbjct: 9 IPVTFPFE-PYEVQKSYMEKVIESLQNNTNAVLESPTGTGKTLSLLCSSLAWLLVKKAQL 67
Query: 65 ---------------ENPV--------------------KLIYCTRTVHEMEKTLAELKL 89
N + K+IY +RT ++ + + ELK
Sbjct: 68 QMNAQLGNFSEHSGYSNALRDNLKSNAGKSKDNTSWGMPKIIYSSRTHSQLTQAMQELK- 126
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
RH+ A L SR +C++ V N + C+ + S
Sbjct: 127 --RSSYRHVKAAV------LGSRDQMCIHPEVSKETNNMNKVHMCQLKVKS--------- 169
Query: 150 PNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYS 208
TC F+ N E K +V + ++DL + GK+ CPY+L++ + Q A+++
Sbjct: 170 ---RTCHFYNNVESKKDDRSVKGDDILDIEDLVSVGKKLKCCPYYLSKELKQDADIIFMP 226
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVR 252
Y YLLDPK E+ ++++ DEAHN++ +C E+ S+ +R
Sbjct: 227 YNYLLDPKSRRANGVELM-NNIIILDEAHNVEKMCEESASLQIR 269
>gi|198421637|ref|XP_002120480.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1008
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 8/257 (3%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++++TSGTLSP++ + L ++ + + + + LT G +++ F R
Sbjct: 467 RNLILTSGTLSPLESFTSELQIDFPITLENDHVIDKHQVFVITLTHGKKGGLLNSTFKTR 526
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND-SGILKEIMQHKLVFIE 568
D + G + +M++ P G + FF SYS M E + W + S ++ + + K +E
Sbjct: 527 KDVNQVQELGLTVADMIAAAPGGALVFFPSYSAMAEYLTIWKENSNVMTLVEKVKPCTVE 586
Query: 569 TQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
++ E A+D Y + G G F +V RGKV+EG+DF GR VI+ G+P+
Sbjct: 587 PKNKHELRTAIDKYYTDVNTG-GGTFLAVCRGKVSEGLDFSDDNGRTVIIVGIPYPPAFD 645
Query: 629 KILLARLEYLRDTFQIKEGDFLTF------DALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+ ++ +L D LT A R Q +GRVIR + DYG ++ D RY
Sbjct: 646 PRIKMKMAFLDDLRTKGATSLLTGREWYRQQACRAVNQAIGRVIRHRYDYGAIVLCDHRY 705
Query: 683 SRHDKRSKLPGWILSHL 699
+ D+ S+LP W+ H+
Sbjct: 706 AGRDQLSELPKWVQPHV 722
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 50/272 (18%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
+ + V FP+ Y Q SYM ++ +AL+ + LE PTGTGKT+ LL ++
Sbjct: 6 IHGIKVEFPF-TAYEVQKSYMTKVIQALNTHQNAALESPTGTGKTLCLLCSTLAWRRQHL 64
Query: 60 -VLSKPENPV--------------------KLIYCTRTVHEMEKTLAELKLLHNYQTRHL 98
L K NPV K+IY +RT ++ + + ELK
Sbjct: 65 NELKKHTNPVSQEDAWSSSEKSKDSAIPAPKIIYASRTHSQISQVVKELKRT------DY 118
Query: 99 GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFF 158
G I +G SR+ +C++ V + ++ CR + N TC+F+
Sbjct: 119 GKDITISILG--SREQMCIHPEVSKQTSNQAMVHMCRGKI------------NKHTCQFY 164
Query: 159 ENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF--ANVVVYSYQYLLDPK 216
N E A + V +++L GK + CPY+ R + + ++ Y YLLD K
Sbjct: 165 NNVEDAKKNNIFTTKVMDIEELVTVGKSRTVCPYYSEREVSKQNECGIIFTPYNYLLDRK 224
Query: 217 VAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
+ E+ + ++V+FDEAHN++ +C E+ S
Sbjct: 225 SRATNNLEI-RGNIVIFDEAHNLEKLCEESTS 255
>gi|148706380|gb|EDL38327.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 942
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-----VSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL V V S + D I P+++ G
Sbjct: 643 VVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPS 702
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCF SY Y+ ++ A W+ +G+L
Sbjct: 703 NQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTR 762
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKAC-DCGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K C GA+ SV GK++EGI+F
Sbjct: 763 LSVRKKIFQEPKRASQVEQVLMAYSKCIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDD 822
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T +G L L + Q +GR
Sbjct: 823 LGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRA 882
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D RY+R +KLP WI RD + + A R+F R+ +
Sbjct: 883 IRHQRDFASIVLLDHRYARPSILAKLPAWI----RDRVEVKATFGPAFAAVRKFHREKSH 938
Query: 725 P 725
P
Sbjct: 939 P 939
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAE-LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
K+ YC+RT ++ + + E LK +TR + L SR+ LCVN V +
Sbjct: 261 TKIYYCSRTHSQLAQFVREVLKSPFGKETR---------LVSLGSRQTLCVNEDVKNLGS 311
Query: 127 RDSVDAAC-------RKRTASWVRALAAENPNIET-CEFFENYEKAASAAVLPPGVYTLQ 178
++ C R++ + + I+T C F+ + + + V ++
Sbjct: 312 VQLMNDRCVDMQRSKREKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLEVKDME 371
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV Y LL +Q + VV+ DEAHN
Sbjct: 372 QLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQ-VVIIDEAHN 430
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ + S V L A S++ Q +ER++ RL+A+
Sbjct: 431 LIDTITNIHSTEVNGSQLCQAH---SQLLQYMERYRK----RLKAK 469
>gi|51491862|ref|NP_001003919.1| probable ATP-dependent RNA helicase DDX11 [Mus musculus]
gi|81884425|sp|Q6AXC6.1|DDX11_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=DEAD/H box protein 11
gi|50926041|gb|AAH79656.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae) [Mus musculus]
Length = 880
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-----VSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL V V S + D I P+++ G
Sbjct: 581 VVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPS 640
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCF SY Y+ ++ A W+ +G+L
Sbjct: 641 NQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTR 700
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKAC-DCGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K C GA+ SV GK++EGI+F
Sbjct: 701 LSVRKKIFQEPKRASQVEQVLMAYSKCIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDD 760
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T +G L L + Q +GR
Sbjct: 761 LGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRA 820
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D RY+R +KLP WI RD + + A R+F R+ +
Sbjct: 821 IRHQRDFASIVLLDHRYARPSILAKLPAWI----RDRVEVKATFGPAFAAVRKFHREKSH 876
Query: 725 P 725
P
Sbjct: 877 P 877
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAE-LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
K+ YC+RT ++ + + E LK +TR + L SR+ LCVN V +
Sbjct: 199 TKIYYCSRTHSQLAQFVREVLKSPFGKETR---------LVSLGSRQTLCVNEDVKNLGS 249
Query: 127 RDSVDAAC-------RKRTASWVRALAAENPNIET-CEFFENYEKAASAAVLPPGVYTLQ 178
++ C R++ + + I+T C F+ + + + V ++
Sbjct: 250 VQLMNDRCVDMQRSKREKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLEVKDME 309
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV Y LL +Q + VV+ DEAHN
Sbjct: 310 QLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQ-VVIIDEAHN 368
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ + S V L A S++ Q +ER++ RL+A+
Sbjct: 369 LIDTITNIHSTEVNGSQLCQAH---SQLLQYMERYRK----RLKAK 407
>gi|170029991|ref|XP_001842874.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|167865334|gb|EDS28717.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 873
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 6/256 (2%)
Query: 450 QSVVITSGTLSPID-LYPRLLN--FHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+S+++ GT+ PID L +L V RS++ + D + P+ + +G + +
Sbjct: 592 RSIILAGGTMHPIDELTEQLFKDCAERVEIRSYRHVVPADAVLPLAIGKGPSGKELLFNY 651
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
R + + +L + +VP GIVCFF SY Y+D+ AT +G L I + K VF
Sbjct: 652 ANRQNKELLNELSSVLANLCQVVPHGIVCFFASYDYLDQFYATIQTNGRLDRITERKRVF 711
Query: 567 IETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
E + L Y +A GA+ SV GK++EG++F GR V++ G+P+
Sbjct: 712 REPRGTTNVDSILAEYAQAARHS-GALMLSVVGGKLSEGLNFADELGRCVVVVGLPYPNR 770
Query: 627 LSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 685
S L R+ YL T + G ++ ++ QC+GR +R DY ++ D RY
Sbjct: 771 TSPELAERMRYLDRTLKPPAGNEYYENLCMKAVNQCIGRAVRHIRDYASVVLLDSRYGTS 830
Query: 686 DK-RSKLPGWILSHLR 700
++ R KLP WI L+
Sbjct: 831 ERIRKKLPVWIADGLQ 846
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 42/232 (18%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
PV++I+C+RT ++ + + E+ R +I ++SR+NLC+N V +
Sbjct: 194 PVQVIFCSRTHSQLSQVVNEV--------RRTEFGKQIRLTMIASRQNLCINQEVRKLKT 245
Query: 127 RDSVDAACRKRTASWVRALAA-ENPNI----------ETCEFFENYEKAASAAVLPPGVY 175
V+ C + + +A E+ N+ + C F Y + A + ++
Sbjct: 246 NTLVNERCLEMQKNSGKATCKDEDGNVSKKRKVSSSAQKCPF---YNREAIEELKNNSLF 302
Query: 176 TLQDLR---AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+QD+ +F KQ+ CPY+ +R V +++ YQ LL K ++ K +V++
Sbjct: 303 EVQDIEELVSFAKQEKACPYYASRAAVGDTQLLMVPYQNLLHRKTREQTGLDI-KNAVII 361
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQ 268
DEAHN+ + S V + L+ A T+NL +INQ
Sbjct: 362 VDEAHNLLDTISSIHSQEVSLECLQQARLQLTAYKKQYFQRFSTKNLLKINQ 413
>gi|256075476|ref|XP_002574045.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 1120
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 159/324 (49%), Gaps = 32/324 (9%)
Query: 452 VVITSGTLSPIDLYPRLLNFH-PVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
+++TSGTL P++ LN P+ R+ + + D + ++ RG D ++ + +R
Sbjct: 461 IILTSGTLYPVEPIEAELNLKFPITLRNPHV-INPDQLNLSIIPRGPDGEKLNATYSVRE 519
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ 570
+ G LL+++ +VP G++ FF SYS+M + I W D + +++ + K +FIE +
Sbjct: 520 TSAYRNSLGLLLIQLADVVPAGLLIFFPSYSFMSQCIEYWKDGDVYEKLSRSKHIFIEPR 579
Query: 571 DVVETTLALDNYRK-AC-DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
+ + + YRK AC + GA+ F+V RG+V+EG+D + GR V + G+P+
Sbjct: 580 EKNQFNKIFNEYRKTACIENSVGAILFAVMRGRVSEGLDLADNAGRGVFILGIPYAPIHD 639
Query: 629 KILLARLEYLRDTF----------QIKEG---------DFLTFDALRQAAQCVGRVIRSK 669
+ ++ YL + F Q+++ + A R Q VGRVIR
Sbjct: 640 PRVSLKMAYLDEQFVKLKSNSTHDQLQKTLIDKYPTGRQWYNLQAWRAINQAVGRVIRHY 699
Query: 670 ADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYD-- 727
DYG++ D+R++ ++ + L GW+ + + + + ++ + EF R M Y
Sbjct: 700 KDYGIIYLCDERFASNNAQLNLAGWMQTKCKVYN---NVELVVKDTDEFFRNMRNKYPST 756
Query: 728 ----KAGSIGRKTLLSQADLEKMT 747
++ SI TL + + L +
Sbjct: 757 DRPLESTSIVNNTLTATSSLRSVN 780
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 51/250 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
++ V + FPY Y Q+ YM ++ +L+ H +LE PTGTGKT+ LL ++ L K
Sbjct: 6 IDGVEIDFPYQP-YDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAW-LDKQ 63
Query: 65 ENPVKLIYCTRTVHE-----------------MEKTLAELKLLHN-----YQTR-HLGPA 101
N V+LI T H+ + LA L ++N Y +R H A
Sbjct: 64 ANSVQLISATDAKHQNTMGKRPTSDNVDNALSHQNFLASLGKVNNGCKIIYASRTHSQLA 123
Query: 102 AKILAIG-----------LSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENP 150
I A+ + SR LC+ V + E+ + ACR R +
Sbjct: 124 QAINALKGTVYSRRSVSVVGSRDQLCLLPDVTSLESNSAKIYACRMRVQT---------- 173
Query: 151 NIETCEFFENYEKAASAAVL---PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
TCE+F N++ + G+ ++DL +G++ CPYF++R + ++++
Sbjct: 174 --RTCEYFRNFDSKRDEILTNLKSEGIVDIEDLSNYGQKIKCCPYFISRELKTDSSLIFM 231
Query: 208 SYQYLLDPKV 217
Y Y+LDP+V
Sbjct: 232 PYNYVLDPRV 241
>gi|302829651|ref|XP_002946392.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
gi|300268138|gb|EFJ52319.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
Length = 700
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 26/300 (8%)
Query: 426 IPDPVLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
+P P L C +A + + R +S ++TSGTLSP+D + L V +
Sbjct: 383 LPAPTLSYWCFIPGMAFRRLAALRLRSFLLTSGTLSPMDSFAGELQIPFQVRLENPHVIE 442
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ VL G P+++ + R G LV + +VPDG++ FF SY+ MD
Sbjct: 443 PSQVWVGVLPTGPSGAPLNSTYASRDSATYKDELGNALVNVARLVPDGLLVFFASYAAMD 502
Query: 545 EIIATWNDSG-------ILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFF 595
I W +G + I++HK +E ++ A++ +R D +GAVFF
Sbjct: 503 SAINHWKQNGGAGGVGSTWERIVRHKAPVVEPRESSAFGAAIEEFRSKLDDPATQGAVFF 562
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQY-TLSKILLARLEYLRDTFQIKEGD------ 648
+V RGKV+EG+DF GR V++ G+P+ K+ L R + + G
Sbjct: 563 AVCRGKVSEGLDFSDRAGRAVVITGIPYAVKNDPKVRLKRDVLDEEARALSSGSSALAGE 622
Query: 649 ---------FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+ T A+R Q +GRVIR + DYG ++ AD R+ + + + W+ H+
Sbjct: 623 GVEPLTGEAWYTNTAMRAVNQAMGRVIRHRYDYGAILLADDRFRNPNTQRNMSRWVREHV 682
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 41/274 (14%)
Query: 4 KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS- 62
++ + V FP++ Y Q +YM + +AL + LLE PTGTGKT+ LL ++ S
Sbjct: 1 QIAGIPVEFPFEP-YACQRNYMESVIKALQEGRNALLESPTGTGKTLCLLCSTLAWRESL 59
Query: 63 -------------KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGL 109
KPE P+ +IY +RT ++ + + EL+ +Y+ R + + L
Sbjct: 60 KVGRTSWMSGGAGKPELPI-IIYSSRTHSQLAQVMKELRN-SSYKDR-------VRSTVL 110
Query: 110 SSRKNLCVN---SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAAS 166
SSR+ C++ +++ + A R SW L F Y AA+
Sbjct: 111 SSRQQTCLHPTANKLSGGAANQACKALTSARKCSWHNQLK-----------FGKYRNAAA 159
Query: 167 AAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226
+ V V +++L GK G CP+FL R + A++V Y YLLDP ++ +
Sbjct: 160 SLV--SSVPDIEELVTVGKTHGVCPFFLGRDAGKEADIVFLPYNYLLDPATRRTMADSIN 217
Query: 227 -KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGA 259
+VV+FDEAHN+++V +A S + + L A
Sbjct: 218 WNNAVVIFDEAHNVESVSSDACSFDITAKQLTDA 251
>gi|67623207|ref|XP_667886.1| helicase [Cryptosporidium hominis TU502]
gi|54659060|gb|EAL37657.1| helicase, belonging to UvrD family [Cryptosporidium hominis]
Length = 1100
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 49/336 (14%)
Query: 431 LQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
L C A+ A+ + +S++ITSGTLSP+D + + V +F + L D +
Sbjct: 525 LSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFSSSNV---TFDVFLENDHVI 581
Query: 490 -------PMVLTRG--SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
L RG ++ + ++ R++P + G ++ + V +PDGI+ FF SY
Sbjct: 582 DSESQLWAATLERGNSANNTHLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSY 641
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY----RKACD--------- 587
S MD+ + W D G+++ I K VFIE ++ E LD+Y +K D
Sbjct: 642 SLMDQAVKHWTDQGLIERIKAFKSVFIEPRNSFELGSVLDSYMDCIKKGADSSSQNDGYF 701
Query: 588 -------------------CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
G++ +V RGKV+EGI+F + R VI+ G+PF
Sbjct: 702 KDKKAKSGLSDFVLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPSIAD 761
Query: 629 KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ + +Y+ D ++ + A+R Q +GRV+R + DYG +I ADKR+++ +
Sbjct: 762 ARVCLKKQYM-DESKMDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKRFNQPNIY 820
Query: 689 SKLPGWILSHLRDAHL-NLSTDMALHIAREFLRKMA 723
++L WI ++ + HL L + +I+ F +K++
Sbjct: 821 TRLSKWIRTNTK--HLPQLDSRQLDNISDFFEKKLS 854
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 133/321 (41%), Gaps = 89/321 (27%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------L 55
+E +V FPYD Y Q +YM ++ +L K H LLE PTGTGKT+ LL+ L
Sbjct: 10 IEGYSVPFPYD-AYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAFQKHFL 68
Query: 56 ITSYVLSKP-ENPV-----------------------------------KLIYCTRTVHE 79
I+ L KP EN ++IY +RT +
Sbjct: 69 ISHGSLKKPIENTSSAGVIKSEGGSIELMGVPRTVLENSKETKMDMLIPRIIYSSRTHSQ 128
Query: 80 MEKTLAELKL-----------------------LHNYQTRHLGPAAKIL--AIGLSSRKN 114
+ + + ELK + R + K L A L SR
Sbjct: 129 LSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTSKKRPVIKGGKKLFKATILGSRDQ 188
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV 174
LCV+ ++ + +++ CRK T C++ N ++A ++ V +
Sbjct: 189 LCVHPKI-SKFRGNALIKNCRKITKEG------------KCKYHNNLKQANTSGV-AADI 234
Query: 175 YTLQDLR--AFGKQQGW-CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
++DL+ A G+ CP++ R + NVV+ Y YLLD + ++ +V+
Sbjct: 235 QDIEDLKNIASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNLKIDLNN-TVL 293
Query: 232 VFDEAHNIDNVCIEALSVSVR 252
+ DEAHN+++V EA S +R
Sbjct: 294 ILDEAHNVESVSEEAYSFDLR 314
>gi|66475604|ref|XP_627618.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
gi|46229294|gb|EAK90143.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
Length = 1108
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 49/336 (14%)
Query: 431 LQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
L C A+ A+ + +S++ITSGTLSP+D + + V +F + L D +
Sbjct: 533 LSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFSSSNV---TFDVFLENDHVI 589
Query: 490 -------PMVLTRG--SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
L RG ++ + ++ R++P + G ++ + V +PDGI+ FF SY
Sbjct: 590 DSESQLWAATLERGNSTNNTHLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSY 649
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY----RKACD--------- 587
S MD+ + W D G+++ I K VFIE ++ E LD+Y +K D
Sbjct: 650 SLMDQAVKHWTDQGLIERIKAFKSVFIEPRNSFELGSVLDSYMDCIKKGADSSSQNDGYF 709
Query: 588 -------------------CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
G++ +V RGKV+EGI+F + R VI+ G+PF
Sbjct: 710 KDKKAKSGLSDFVLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPSIAD 769
Query: 629 KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ + +Y+ D ++ + A+R Q +GRV+R + DYG +I ADKR+++ +
Sbjct: 770 ARVCLKKQYM-DESKMDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKRFNQPNIY 828
Query: 689 SKLPGWILSHLRDAHL-NLSTDMALHIAREFLRKMA 723
++L WI ++ + HL L + +I+ F +K++
Sbjct: 829 TRLSKWIRTNTK--HLPQLDSRQLDNISDFFEKKLS 862
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 133/321 (41%), Gaps = 89/321 (27%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------L 55
+E +V FPYD Y Q +YM ++ +L K H LLE PTGTGKT+ LL+ L
Sbjct: 18 IEGYSVPFPYD-AYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAFQKHFL 76
Query: 56 ITSYVLSKP-ENPV-----------------------------------KLIYCTRTVHE 79
I+ L KP EN ++IY +RT +
Sbjct: 77 ISHGSLKKPIENTSSAGVIKSEGGSIELMGVPRTVLENNKETKMDMLIPRIIYSSRTHSQ 136
Query: 80 MEKTLAELKLL-----------------------HNYQTRHLGPAAKIL--AIGLSSRKN 114
+ + + ELK + R + K L A L SR
Sbjct: 137 LSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTSKKRPVIKGGKKLFKATILGSRDQ 196
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV 174
LCV+ ++ + +++ CRK T C++ N ++A ++ V +
Sbjct: 197 LCVHPKI-SKFRGNALIKNCRKITKEG------------KCKYHNNLKQANTSGV-AADI 242
Query: 175 YTLQDLR--AFGKQQGW-CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
++DL+ A G+ CP++ R + NVV+ Y YLLD + ++ +V+
Sbjct: 243 QDIEDLKNIASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNLKIDLNN-TVL 301
Query: 232 VFDEAHNIDNVCIEALSVSVR 252
+ DEAHN+++V EA S +R
Sbjct: 302 ILDEAHNVESVSEEAYSFDLR 322
>gi|209878272|ref|XP_002140577.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556183|gb|EEA06228.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 1091
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 141/291 (48%), Gaps = 50/291 (17%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVST----- 504
+S+++TSGTLSP+D + + SF++ L D + G++QL V+
Sbjct: 555 RSLIVTSGTLSPLDTLAQQF---SCANFSFEVFLENDHV-----INGNEQLWVAAIEQGA 606
Query: 505 ---------KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI 555
F+ RS+P G +++ V +P G++ FF SY+ MD+ I W G+
Sbjct: 607 PENKTQLIGSFESRSNPAYFEALGSTVLDSVKRIPGGVLLFFASYTLMDQAINLWTIQGL 666
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKAC-------------------------DCGR 590
+ I K VF+E ++ E L++Y K C C
Sbjct: 667 MDRIKALKSVFVEPRNSYELNSILESY-KGCIELKSKNNVKSNSLDKLTDFTNITKKCAN 725
Query: 591 -GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF 649
G++ +V RGK++EGIDF R VI+ G+PF + + +Y+ D +++ +
Sbjct: 726 FGSLLIAVCRGKISEGIDFSDDTCRGVIIAGMPFPSIADPRVCLKKQYM-DEYRMDSRRW 784
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A+R Q VGRV+R + DYG +IFADKR++ + R++L W+ ++R
Sbjct: 785 YNQQAIRAVNQAVGRVVRHRLDYGAVIFADKRFTHTNIRNQLSKWLRGYIR 835
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 99 GPAAKIL-AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEF 157
P K+ A L SR LCV+ ++ + ++ CRK T C +
Sbjct: 187 NPGNKLFKATILGSRDQLCVHPKI-SKYRGSALVKNCRKTTKEG------------KCRY 233
Query: 158 FENYEKAASAAVLPPGVYTLQDLRAFGKQQG--WCPYFLARHMVQFANVVVYSYQYLLDP 215
N K A+ + + ++DL+ +CP++ R + NV++ Y YLLD
Sbjct: 234 HNNL-KQANMTGIAGDIEDIEDLKRIASTDSGYFCPFYATREIANICNVILLPYNYLLDS 292
Query: 216 KVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVR 252
+ ++ ++++ DEAHN+++V EA S +R
Sbjct: 293 ITRQNLKLDLNN-TIIILDEAHNVESVAEEAYSYDLR 328
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS 54
++ ++ +V FPY Y Q +YM ++ +L + H LLE PTGTGKT+ LL+
Sbjct: 7 VYTIDGYSVNFPYK-AYDCQITYMEKVLYSLKHRKHALLESPTGTGKTMCLLA 58
>gi|32398845|emb|CAD98555.1| similar to helicase-like protein nhl, possible [Cryptosporidium
parvum]
Length = 1100
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 49/336 (14%)
Query: 431 LQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
L C A+ A+ + +S++ITSGTLSP+D + + V +F + L D +
Sbjct: 525 LSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFSSSNV---TFDVFLENDHVI 581
Query: 490 -------PMVLTRG--SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
L RG ++ + ++ R++P + G ++ + V +PDGI+ FF SY
Sbjct: 582 DSESQLWAATLERGNSTNNTHLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSY 641
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY----RKACD--------- 587
S MD+ + W D G+++ I K VFIE ++ E LD+Y +K D
Sbjct: 642 SLMDQAVKHWTDQGLIERIKAFKSVFIEPRNSFELGSVLDSYMDCIKKGADSSSQNDGYF 701
Query: 588 -------------------CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
G++ +V RGKV+EGI+F + R VI+ G+PF
Sbjct: 702 KDKKAKSGLSDFVLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPSIAD 761
Query: 629 KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ + +Y+ D ++ + A+R Q +GRV+R + DYG +I ADKR+++ +
Sbjct: 762 ARVCLKKQYM-DESKMDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKRFNQPNIY 820
Query: 689 SKLPGWILSHLRDAHL-NLSTDMALHIAREFLRKMA 723
++L WI ++ + HL L + +I+ F +K++
Sbjct: 821 TRLSKWIRTNTK--HLPQLDSRQLDNISDFFEKKLS 854
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 133/321 (41%), Gaps = 89/321 (27%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------L 55
+E +V FPYD Y Q +YM ++ +L K H LLE PTGTGKT+ LL+ L
Sbjct: 10 IEGYSVPFPYD-AYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAFQKHFL 68
Query: 56 ITSYVLSKP-ENPV-----------------------------------KLIYCTRTVHE 79
I+ L KP EN ++IY +RT +
Sbjct: 69 ISHGSLKKPIENTSSAGVIKSEGGSIELMGVPRTVLENNKETKMDMLIPRIIYSSRTHSQ 128
Query: 80 MEKTLAELKL-----------------------LHNYQTRHLGPAAKIL--AIGLSSRKN 114
+ + + ELK + R + K L A L SR
Sbjct: 129 LSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTSKKRPVIKGGKKLFKATILGSRDQ 188
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV 174
LCV+ ++ + +++ CRK T C++ N ++A ++ V +
Sbjct: 189 LCVHPKI-SKFRGNALIKNCRKITKEG------------KCKYHNNLKQANTSGV-AADI 234
Query: 175 YTLQDLR--AFGKQQGW-CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
++DL+ A G+ CP++ R + NVV+ Y YLLD + ++ +V+
Sbjct: 235 QDIEDLKNIASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNLKIDLNN-TVL 293
Query: 232 VFDEAHNIDNVCIEALSVSVR 252
+ DEAHN+++V EA S +R
Sbjct: 294 ILDEAHNVESVSEEAYSFDLR 314
>gi|50312507|ref|XP_456289.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636409|sp|Q6CIF0.1|CHL1_KLULA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49645425|emb|CAG98997.1| KLLA0F27181p [Kluyveromyces lactis]
Length = 807
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 141/651 (21%), Positives = 270/651 (41%), Gaps = 86/651 (13%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
++P+K+ + +RT ++ + ++L L + +I + L+SRK LC++++V
Sbjct: 198 KSPLKIYFSSRTHSQLTQFASQLTLPSFPPSSPTLEKERIKFLPLASRKQLCIHAKVSKL 257
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT----LQDL 180
++ D ++ AC E + C+F+ N S+ ++ ++DL
Sbjct: 258 KS-DLINDAC------------VETVKRQECQFYTNSRDLISSKQFRDYTFSEISDIEDL 304
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
G CPY+ +R ++ A +V YQ++L ++ + + K+S+V+ DEAHN+
Sbjct: 305 VQLGHSLHVCPYYSSRTALEGAEIVTLPYQHILSFEIRESLGINL-KDSIVIIDEAHNLM 363
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPN 300
+ S + ++ + L +I + +FK G+ R +L++ L +
Sbjct: 364 DTITSIYSCEISLSDIK-ICKKLMKI--YLNKFKRKLNGKNRVNIMKLMKLLDILQAFIE 420
Query: 301 AWLSNPALPSDILKEAVPGNI-RRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASI 359
+ KE P ++ R + L + LV Y+RG ++ +
Sbjct: 421 SHFEKG-------KEISPQSMFRDSNADLLNIHELVTYMRGSKIAYKIDSYADSKLKSDE 473
Query: 360 TAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPF 419
+ + Q L ++ +L+L + G++ F
Sbjct: 474 SNTNSVKQPILF----KISKFVLSL---------------SNPSFEGSFF---------F 505
Query: 420 DERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSF 479
+E M +++ + + K + + + V++ GT+ P + + N P V
Sbjct: 506 EEGM------IIKYMLLEPNQIFKTIVNDSKCVILAGGTMQPTSEF--IENLLPFVPSKD 557
Query: 480 KMSLTRDCICPMVLTRGSDQLPVSTKFDM----RSDPGVARNYGKLLVEMVSIVPDGIVC 535
+ + + I P D VS F+ R++ V L+E+ VP GIV
Sbjct: 558 IVQFSCNHIIP---ESNLDTFIVSEGFNFNYESRNNESVMCKLYDFLLELGCRVPHGIVV 614
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC-DCGRGAVF 594
FF SY Y++ +I W I +++ +K +F ET + L Y D +GA
Sbjct: 615 FFPSYGYLEHVIKFWQLEEIFEKLSMNKRIFYETPGGSDI---LPQYSSTILDKKKGAFL 671
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDF 649
FSV GK++EGI+F + R V+M G+P+ S LL + ++ +K+
Sbjct: 672 FSVVGGKLSEGINFQDNLARAVVMVGLPYPNLYSSELLVKKRHIEQKVISAGGSLKDAKS 731
Query: 650 LTFD-----ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
T + ++ Q +GR IR DY + D RY + + KL W+
Sbjct: 732 ATIEFYENICMKAVNQSIGRAIRHANDYACIYLVDNRYLNNKVQHKLSEWV 782
>gi|118383994|ref|XP_001025150.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89306917|gb|EAS04905.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1032
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 41/358 (11%)
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRF-QSVVITSGTLSPIDLYPRLLN--FHPVV 475
FD P +P L L+C + SL K + + ++ TSGTL P + + L F+ ++
Sbjct: 526 FDLEDPE--NPQLNLTCLNPSLNFKKILQQDPHCLLFTSGTLKPFNFWKTELQIPFNVIL 583
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVST-------KFDMRSDPGVARNYGKLLVEMVSI 528
+ + ++ R S ++T ++ R D + + G L E+ I
Sbjct: 584 ENKHVIDSKKQLFSAVIKGRPSKSSVITTYKQTFNFSYEKRKDQDMILDLGNALAELFEI 643
Query: 529 VPDGIVCFFVSYSYMDEIIATWNDS-----------GILKEIMQHKLVFIETQDVVETTL 577
+P+G++ F S M++ + W++ I ++ K ++ E + ET
Sbjct: 644 IPNGVLIVFPSNQLMNQCRSQWSNFFSNQNSNNQQQKIYNRLLSKKFIYWEGKTNTETMS 703
Query: 578 ALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY 637
A+ ++R+ +G+ FF VARGK+ EGIDF R VI+ G+P+ + + + +Y
Sbjct: 704 AMQDFRQKSKTQKGSAFFCVARGKITEGIDFADESARAVILIGLPYPPLKNINIQVKKDY 763
Query: 638 LR-----DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
L ++ +I ++ +A+R Q +GRVIR D+G +IF D+R+ + D +P
Sbjct: 764 LNQQSKLNSQRINGNEWYVQEAIRAMNQSIGRVIRHINDWGSVIFLDERFGQQDIIKHMP 823
Query: 693 GWILSHLRDAHLNLSTDMALHIAREFL--RKMAQPYDKAGSIGRKTLLSQADLEKMTN 748
W L+ D S D AL +F +KM A ++ L Q +L+K N
Sbjct: 824 SWCLTQQID-----SFDQALIQLSQFFSEKKM------ASKQKQEELRKQINLKKKDN 870
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 30/267 (11%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+ ++ VYFP+ Y Q YM + + L + H LLE PTGTGKT+++L ++ +
Sbjct: 68 INNIEVYFPHK-PYDVQVVYMESVIKCLQERTHGLLESPTGTGKTLSMLCACLGWLQQRR 126
Query: 65 EN--------PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLC 116
E P ++IYC+RT ++++ + E+K T P KI+ G SR+ C
Sbjct: 127 EQQQGIKDIIPNRIIYCSRTHSQIQQVVKEIK------TTAYQP--KIIVQG--SREQYC 176
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+ + ++ +C+K A++ NP C +F+ S +
Sbjct: 177 IKKEFQQLKG-GLLNTSCQK-------AISQLNPQT-YCRYFKG-TMDESRDFFKLRMPD 226
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++DLR+ G +CP++ + + +V+ Y YLLD V + + K +V++FDEA
Sbjct: 227 IEDLRSDGYNNNYCPFYHTQKVNNAVDVLFLPYNYLLDRNVMNQANINI-KNAVIIFDEA 285
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNL 263
HNI E S+ + +L A +L
Sbjct: 286 HNIHKSAEEGYSLFLNYSSLCAAEADL 312
>gi|345492904|ref|XP_001602139.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Nasonia vitripennis]
Length = 869
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 13/257 (5%)
Query: 450 QSVVITSGTLSPIDLYPRLL------NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVS 503
++VV+ GT+ P+ + L +V+ S + ++ I +L G +
Sbjct: 583 RAVVLAGGTMEPMSEFKEQLFISAGAKSERIVTFSCDHVIPKENILTCILKTGPTGIDFE 642
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
F R + + G+ LV + +IVP G+V F SYSY D + +G+L +I K
Sbjct: 643 FNFQNRQNTKMLDELGRTLVNLCNIVPAGLVVFLPSYSYEDLLFKHLESNGVLTKIRTKK 702
Query: 564 LVFIETQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
VF E + + L+ Y A + GA+ FSV GK++EG++F GR VI+
Sbjct: 703 TVFREPKSTTQVNQILEKYASAAKTPQKPQNGAILFSVVGGKLSEGLNFSDDLGRCVIVV 762
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
G+P+ S L +++YL + G F ++ QC+GR +R ADY ++
Sbjct: 763 GMPYPNVKSPELQEKMKYLNENVNPNAGSVFYENSCMKAVNQCIGRAVRHIADYSTVVLL 822
Query: 679 DKRYSRHDKRSKLPGWI 695
D+RYS +K LPGWI
Sbjct: 823 DRRYS--NKTKSLPGWI 837
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 65 ENPV--KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
E+P K+ +C+RT ++ + + ELK + K+ + L+SR N C+NS+V
Sbjct: 195 ESPANCKIFFCSRTHSQLSQFVGELKKSPYFD--------KVSLVSLASRNNYCINSKVK 246
Query: 123 AAENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
A ++ + ++ C +K+ S + +C F + A +L + ++
Sbjct: 247 ALKSINLINDQCQQLQKKKATSKQEKDLKRSKTSTSCPFMPGDQSLLMAEIL-TSIRDIE 305
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
+ ++ CPY+ R V+ V++ Y +L K + S K ++++ DEAHN
Sbjct: 306 ETVKLSEEIKTCPYYSTRKSVEDGQVILVPYNSILH-KNTRVSSGINLKNNILIVDEAHN 364
Query: 239 I 239
+
Sbjct: 365 L 365
>gi|406606908|emb|CCH41762.1| chromosome transmission fidelity protein 1 [Wickerhamomyces
ciferrii]
Length = 814
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 23/299 (7%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS----LTRDCICPMV 492
D S K + + + V++ GT+ P++ Y L + S+ K S + ++ + +
Sbjct: 521 DPSQIFKEIVEEVKCVILAGGTMEPVEDYTNYLFPYLEPSKVNKFSCGHIIPKENLNVFI 580
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
+ + + S F R D + ++G+ L ++ VP G+V F SY ++ +I++ W
Sbjct: 581 IDKNKSEFEFS--FGKRQDNLMKEDFGRSLCSLMKNVPAGMVVFLPSYKFLADIVSVWKK 638
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHY 612
S I EI K VF+E+ TT L++Y G+G++ SV G+++EGI+F
Sbjct: 639 SNIWNEINFIKKVFMESA----TTDVLEDYSLNVAEGKGSLLLSVVGGRLSEGINFSDDL 694
Query: 613 GRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD----------FLTFDALRQAAQCV 662
R V+M G+PF S L++R Y+ K GD F +R Q V
Sbjct: 695 ARAVVMVGLPFPNVFSDELVSRKRYIESQVLEKTGDKRQAIEATKSFYENICMRAVNQSV 754
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
GR IR + DY + F DKRY RSKL WI + + S D L F R+
Sbjct: 755 GRSIRHRGDYSTIYFFDKRYHTPRIRSKLSNWIKERVSETS---SFDSILKETNSFFRE 810
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
S E VK+++ +RT ++ + ++L L H + + +G + + L SRK LC++ +V
Sbjct: 196 SNSEKDVKVLFASRTHSQLSQFSSQLTLPH-FPSSIVGIEEHLKYLSLGSRKQLCIHEKV 254
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP-------PGV 174
+ ++ AC + + CEFF + + + V
Sbjct: 255 SKMSDVSLMNEACLD---------LQKQESKHKCEFFSSQKDHDMQNRIIEFRDHIFSKV 305
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL + GK G CPY+ R + + V+ YQ LL ++ + K+ VVV D
Sbjct: 306 QDIEDLNSVGKNLGVCPYYSTRKAIPGSEVITLPYQLLLQKSSRDALNISI-KDCVVVID 364
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
EAHN+ + I SV+V + L R
Sbjct: 365 EAHNLLDTIISLHSVAVTIDEFSACKKALKR 395
>gi|443694244|gb|ELT95437.1| hypothetical protein CAPTEDRAFT_179377 [Capitella teleta]
Length = 837
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 7/253 (2%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTLSPI + + + + + L++G D P+ + ++ R
Sbjct: 482 KSIILTSGTLSPISSFKSEMGIDFQIELENPHVIDPKQVWVGTLSKGPDNEPLCSDYNTR 541
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
++ G +V IVP G++ FF SY MD+ + W + + Q K V++E
Sbjct: 542 FKESYQKSLGNAVVNFSRIVPHGLLLFFPSYPVMDQCVTNWRSGTLWSRMDQMKSVYVEP 601
Query: 570 QDVVE--TTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
++ E TT+A + D GA F +V RGKV+EG+DF GR V++ G+P+ +
Sbjct: 602 RNKHEFNTTMAAYYDKINDDTCNGATFAAVCRGKVSEGLDFADRNGRAVVITGLPYPPRM 661
Query: 628 SKILLARLEYLRDTFQ-----IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
++ ++++L +T + + ++ A R Q +GRVIR K D+G +I D+R+
Sbjct: 662 DPKVMLKMKFLDETRRAGGKGLTGQEWYGQQATRAVNQAIGRVIRHKDDFGAIILCDRRF 721
Query: 683 SRHDKRSKLPGWI 695
+ ++LP W+
Sbjct: 722 ADQRAINQLPSWV 734
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 66/309 (21%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPEN- 66
V+V FP+D YP Q YM + L + +LE PTGTGKT+ LL +++ +K
Sbjct: 9 VSVNFPFDP-YPCQVDYMSSVVSCLKTGQNAILESPTGTGKTLCLLCSSLAWLETKRAQI 67
Query: 67 ---------------------------------------PVKLIYCTRTVHEMEKTLAEL 87
P K+IY +RT ++ + + EL
Sbjct: 68 TSQRWNIAQANADDGGEGSLNVGKQDLAGKLNEAAVLLAPPKIIYASRTHSQLTQVIQEL 127
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
K R K+ +G SR+ +C++ +V+ E+ CR + S
Sbjct: 128 K-------RSAYSHFKVSVLG--SREQMCIHPQVMKEESNTVKVHMCRSKVTS------- 171
Query: 148 ENPNIETCEFFENYEKAASAAV---LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
TC F+ N + SA + ++DL GK+ CPY++AR + A++
Sbjct: 172 -----RTCHFYNNMDTEFSADAKHNFTNQLMDIEDLVVQGKKMNCCPYYVARELKNDADI 226
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
+ Y YLLDPK E+Q ++V+FDEAHN++ +C ++ S + A R +
Sbjct: 227 IFLPYNYLLDPKSRKAHGVELQG-NIVIFDEAHNLEKMCEDSASFDFTSTDIASAMREVD 285
Query: 265 RINQEIERF 273
+ ++
Sbjct: 286 SVAGRLQEL 294
>gi|29612643|gb|AAH49929.1| Ddx11 protein, partial [Mus musculus]
Length = 443
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-----VSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL V V S + D I P+++ G
Sbjct: 144 VVKECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHVIPPDNILPLIICSGPS 203
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCF SY Y+ ++ A W+ +G+L
Sbjct: 204 NQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWDKTGLLTR 263
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKAC-DCGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K C GA+ SV GK++EGI+F
Sbjct: 264 LSVRKKIFQEPKRASQVEQVLMAYSKCIMSCSHSEGHLTGALLLSVVGGKMSEGINFSDD 323
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL------RQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T +G L L + Q +GR
Sbjct: 324 LGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQPLPGTVLIENLCMKAINQSIGRA 383
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D RY+R +KLP WI RD + + A R+F R+ +
Sbjct: 384 IRHQRDFASIVLLDHRYARPSILAKLPAWI----RDRVEVKATFGPAFAAVRKFHREKSH 439
Query: 725 P 725
P
Sbjct: 440 P 440
>gi|345789824|ref|XP_543101.3| PREDICTED: regulator of telomere elongation helicase 1 [Canis lupus
familiaris]
Length = 1689
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 11/285 (3%)
Query: 427 PDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR 485
P VL C +++ + + ++V++TSGTL+P+ + + V + +
Sbjct: 447 PGKVLSYWCFSPGHSMRQLVQQGVRTVILTSGTLAPVSSFALEMQIPFPVCLENPHVIHQ 506
Query: 486 DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
I +++RG D +S+ FD R + GK L + +VP G++ FF SY ++
Sbjct: 507 QQIWVGIVSRGPDGAQLSSAFDKRFSEACLSSLGKALGNIARVVPHGLLVFFPSYPVLER 566
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVA 603
+ W ++ K VF+E ++ + +D Y R AC GA F +V RGK +
Sbjct: 567 SLQFWRTHDSAGKLEALKPVFVEPRNKGGFSEVVDAYYARVACPGSTGATFLAVCRGKAS 626
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRD-------TFQIKEG-DFLTFDAL 655
EG+DF GR VI+ G+P+ + ++ ++++L + Q+ G ++ A
Sbjct: 627 EGLDFADMNGRGVIITGLPYPPRMDPRVVLKMQFLDEIKNHRGPGGQLLSGHEWYRQQAS 686
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ H+R
Sbjct: 687 RAVNQAIGRVIRHRHDYGAIFLCDHRFAHVDARAQLPSWVRPHVR 731
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 145/320 (45%), Gaps = 65/320 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L V V FP++ Y Q YM ++ L + + +LE PTGTGKT+ LL
Sbjct: 6 LNGVAVDFPFEP-YKCQEEYMSKVLECLQKRVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 54 SLITSYVLSKP--------------------------ENPVKLIYCTRTVHEMEKTLAEL 87
I+++ +++ + K+IY +RT ++ + + EL
Sbjct: 65 DAISAHKIAERVQGELFLDRTLSSWGDAAADAGAACYADIPKIIYASRTHSQLTQVIREL 124
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
+ +Y+ R L SR+ LC++ V E+ CRK+ AS
Sbjct: 125 RNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQIHLCRKKVAS------- 167
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 168 -----RSCHFYNNVEEKSLEQELATPILDIEDLVKSGNKHKLCPYYLSRNLKQQADIIFM 222
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YLLD K S ++ K +VV+FDEAHN++ +C E S + T L ++
Sbjct: 223 PYNYLLDTKSRRAHSIDL-KGTVVIFDEAHNVEKMCEETASFDL---TPHDVASGLDVLD 278
Query: 268 QEI-ERFKATDAGRLRAEYN 286
Q + E+ KA LR+E++
Sbjct: 279 QVLEEQTKAAQQDELRSEFS 298
>gi|395829361|ref|XP_003787828.1| PREDICTED: regulator of telomere elongation helicase 1 [Otolemur
garnettii]
Length = 1303
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 13/289 (4%)
Query: 424 PHIPDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS 482
P P VL C +++ V S+++TSGTL+P+ + + +
Sbjct: 446 PRKPGKVLSYWCFSPGHSMRELVRQGVHSLILTSGTLAPVSSFALEMQIPFPICLENPHI 505
Query: 483 LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSY 542
+ + I V+ +G D +S+ FD R + GK L + +VP G++ FF SY
Sbjct: 506 IEQHQIWVGVIPKGPDGAQLSSAFDKRFSEECLSSLGKTLGNIARVVPHGLLVFFPSYPV 565
Query: 543 MDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARG 600
M++ +A W + +++ K +F+E + + +D Y K A GA F +V RG
Sbjct: 566 MEKSLAFWRTRDLARKVEALKPLFVEPRSKGSFSEVIDAYYKQVASPGSSGATFLAVCRG 625
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF-------- 652
K +EG+DF GR VI+ G+P+ + ++ ++++L D Q + + F
Sbjct: 626 KASEGLDFSDMNGRGVIITGLPYPPRMDPRVVLKMQFL-DEIQGQSQAGVQFLSGQEWYR 684
Query: 653 -DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
A R Q +GRVIR + DYG + D R++ D R++LP W+ H++
Sbjct: 685 QQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAYADARAQLPSWVRPHVK 733
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 144/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L VTV FP+ Y Q YM ++ L + + +LE PTGTGKT+ LL ++
Sbjct: 6 LNGVTVDFPF-RPYRCQQEYMTKVLECLQKRVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 60 --------------------VLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
LS N P+ K+IY +RT ++ + ++
Sbjct: 65 DSVSARKIAERVQGELFLDRALSSWGNAAIAGGDPIVCYTDIPKIIYASRTHSQLTQVIS 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHMQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R + Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELATPILDIEDLVKSGSKHRVCPYYLSRSLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNVDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ G LR E++
Sbjct: 279 IDQVLEEQAMVAQQGELRLEFS 300
>gi|380016559|ref|XP_003692248.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Apis
florea]
Length = 856
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 138/664 (20%), Positives = 282/664 (42%), Gaps = 67/664 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAEN 126
K+ +C+RT ++ + + ELK P +K I + L+SR+N CVN V ++
Sbjct: 190 TKIFFCSRTHSQLSQFIEELKK---------SPYSKNISVVTLTSRQNYCVNKNVKKLKH 240
Query: 127 RDSVDAAC-----RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLR 181
+ ++ C +K T + L I C F + +L + ++++
Sbjct: 241 LNLINECCLQLQRKKTTVKDEKDLKRRKIAI-NCPFIPGNQDLLLGEILIQ-IQDIEEIV 298
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
G+ C Y+ +R + ++ +++ Y +L + + K +V++ DEAHN+
Sbjct: 299 QKGESLKTCTYYASRKAIPYSQLILVPYNSILHKNTRISLGINL-KGNVLIIDEAHNL-- 355
Query: 242 VCIEALSVSVRRQTLEGATRNL----SRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
+EA+ + ++ RNL S++ Q +RF+ + + ++L LR
Sbjct: 356 --LEAIE---KMHSVVITGRNLLHCYSQLCQYQKRFQNLFSAKNVLSLSQL--NFCLRKL 408
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL--------------RRLVQYLRGRLE 343
L + + P D + + + + E + + +L L+G +E
Sbjct: 409 LTVLGATTKSNPDDFIDVKISPKLYKIEEIMTEIDTVNIFELLKFIKNSQLCHKLQGFIE 468
Query: 344 TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLT-LEITDTDEFLHIQTICDFA 402
+ + + T GI Q + + S ++T +E + I I +F
Sbjct: 469 ----QYDTNLKIHDYNTKTCGIKQFLNSIKTKDIESDVITNIESNEEQSNNPIIAIVNFL 524
Query: 403 TLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI 462
+ + I + P P + +++ + ++ + ++V++ GT++P+
Sbjct: 525 ECLQNCSSDGRISVIP----GPTVGQSIMKFLLLNPAIHFHDIVRDARAVILAGGTMAPM 580
Query: 463 DLYPRLLNFHPVVSRSFKMSLTRDCICP------MVLTRGSDQLPVSTKFDMRSDPGVAR 516
+ + L + ++ + D + P ++T G + F R + +
Sbjct: 581 NEFIEQLFIAAGAAPERIITFSCDHVIPEENIICNIITHGPTGIEFEFNFQNRENTKLLD 640
Query: 517 NYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETT 576
G+ L+ + +I+P GIV F SY++ + + SGI+ ++ K + E + +
Sbjct: 641 ELGRTLLNLSNIIPAGIVVFLPSYNFEELVYKHLEKSGIIAKLSLKKHILREPKLASQVN 700
Query: 577 LALDNY----RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILL 632
L+ Y ++ + G++ FSV GK++EG++F GR +I+ G+P+ S L
Sbjct: 701 KILEQYSFYIKQPQNSQNGSLLFSVVGGKLSEGLNFSDDLGRCIIVVGMPYPNIKSLELQ 760
Query: 633 ARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKL 691
+++YL + + G +F ++ QC+GR IR DY +I DKRY K L
Sbjct: 761 EKMKYLNENIKPDAGQNFYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYIH--KTKVL 818
Query: 692 PGWI 695
P WI
Sbjct: 819 PHWI 822
>gi|302776424|ref|XP_002971377.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
gi|300161359|gb|EFJ27975.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
Length = 792
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 21/295 (7%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++V+TSGTLSP++ + L V + + I V++ G +++ + R
Sbjct: 429 RTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGANQIWVGVVSSGPSGRALNSSYRTR 488
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHK 563
P + G +V IVPDG++ FF SY ++ + +W N + + I +HK
Sbjct: 489 DSPEYKNDLGNTIVNFARIVPDGLLVFFPSYYLLNSCVDSWQTPNQVNGHTLWERICKHK 548
Query: 564 LVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
+E ++ A +++ + GAVFF+V RGKV+EG+DF GR VI+ G+
Sbjct: 549 QPVVEPKESALFNQAHEDFLAKVKDSTATGAVFFAVCRGKVSEGLDFADETGRAVIVTGM 608
Query: 622 PFQYTLSKILLARLEYLRD----------TFQIKEG-DFLTFDALRQAAQCVGRVIRSKA 670
PF + + +YL + FQ+ G D+ A R Q VGRVIR K
Sbjct: 609 PFAMKTDPKVRLKRQYLDEEGRRTKTITKPFQVLTGEDWYVQQASRAVNQAVGRVIRHKN 668
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
DYG +I D+R+++ +S+L W+ H++ + D A + R F K QP
Sbjct: 669 DYGAIILCDERFAQAGAQSQLSLWLRPHVK--LYSKFGDAAFTLTRFFKDKKPQP 721
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 51/294 (17%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--V 60
+KL+ V V FPYD Y Q YM + AL + LLE PTGTGKT+ LL ++
Sbjct: 5 YKLKGVDVRFPYD-AYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAWRES 63
Query: 61 LSKPE--------------NPVK---------LIYCTRTVHEMEKTLAELKLLHNYQTRH 97
L+ P+ +P +IY +RT ++++ + ELK +Y+
Sbjct: 64 LAPPDRGRRMSASSQSSDLDPTSSQEANKLPTVIYASRTHSQLQQVIHELKAT-SYR--- 119
Query: 98 LGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEF 157
K++A+G SR+ LC+ V R + + ACR T+ R + E+
Sbjct: 120 ----PKMVALG--SREQLCIEKDVQKLRGR-AQNNACR--TSCKARKCYH---HTRVNEY 167
Query: 158 FENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
+ + + + ++DL G+ G CPYFL+R + +++ Y YL+D +
Sbjct: 168 LKKNPELGNEPI------DIEDLVRIGRTHGPCPYFLSRELHGSVDMIFVPYNYLIDKEN 221
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE 271
++ + SV++FDEAHN++ VC +A S + TL +S Q +E
Sbjct: 222 RKSLTGIRWENSVIIFDEAHNLEGVCADAASFDLPTTTLSAC---ISEAGQCVE 272
>gi|302689377|ref|XP_003034368.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune H4-8]
gi|300108063|gb|EFI99465.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune H4-8]
Length = 869
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 139/281 (49%), Gaps = 27/281 (9%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSRSFKMS----LTRDCICPMVLTRGSDQ 499
V D ++VV+ GT+SP+ D++ +L + H R S + + +V+T+G
Sbjct: 567 VVDEARAVVLAGGTMSPMSDVFNQLFS-HVAAERLTSFSCGHIIPSSNLQTLVVTKGPKG 625
Query: 500 LPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEI 559
P+ K + + DP G++L +V + P G+V FF SYS+++ A W SG L +
Sbjct: 626 GPLEFKAERQKDPVAIEELGQILFNLVCVTPKGMVVFFPSYSFLNAAKAAWGQSGALGRL 685
Query: 560 MQHKLVFIETQDVVETTLALDNYRKA---CDCGR---GAVFFSVARGKVAEGIDFDRHYG 613
K +F E ++ + L +Y A D R GA+ F+V K++EG++F
Sbjct: 686 EGRKKIFFEPEETTDVDKVLQSYATAVHEVDPSRPKPGALLFAVIGAKLSEGLNFADDLA 745
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLR--DTFQIKEGDFLTFDALRQAA------------ 659
R V++ G+P+ S L R+ Y++ + +I+EG + + AA
Sbjct: 746 RSVVIVGMPYANLGSAELKERMAYVKRLEERRIREGKQVREKGAKDAAAELYENMCMNAV 805
Query: 660 -QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
Q +GR IR + D+ ++ D+RY+ R+KLP WI S L
Sbjct: 806 NQSIGRAIRHQGDWAALVLLDRRYANVAIRNKLPKWIGSGL 846
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-----------ILAIGLSSRKNLC 116
K+ Y +RT ++ + L EL+ + + G A+ A+ L SRK LC
Sbjct: 204 TKIYYASRTHSQLSQVLPELRRVDERRASCSGKRAREEDDEVRYYTTTRAVALGSRKQLC 263
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+N +L + D +D ACR A+ AE + C + E+ A+ L +
Sbjct: 264 INDTLLKGKRVD-LDEACR--------AMLAEKKE-KRCPHLPSQEEEAAMLDLRDQILA 313
Query: 177 ----LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+++L A G+ G CPYF +R + A +V Y L + ++ K+ +VV
Sbjct: 314 TPKDIEELAATGRASGICPYFGSRKAIDQAELVTLPYNLLFQRSAREALGIDL-KDQIVV 372
Query: 233 FDEAHNI 239
DEAHN+
Sbjct: 373 IDEAHNV 379
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
FPY Y Q M L L++K ++E PTGTGKT++LL+ +++
Sbjct: 20 FPYPQPYQIQLDLMRHLYEVLESKKISIVESPTGTGKTLSLLTASLTWL 68
>gi|363741498|ref|XP_417435.3| PREDICTED: regulator of telomere elongation helicase 1 [Gallus
gallus]
Length = 1220
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 35/325 (10%)
Query: 450 QSVVITSGTLSPIDLY--------PRLL-NFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
+++++TSGTLSP+ + P LL N H + R + ++ +G D
Sbjct: 449 RTIILTSGTLSPLSSFTMEMQIPFPVLLENPHVIDKRQLWVG---------IIPKGPDGT 499
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
+++ ++ R + GK + +V +VP G++ FF SY MD+ + W + K I
Sbjct: 500 VLNSAYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFAKRIE 559
Query: 561 QHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
+ K +F+E ++ +D Y + AC GA F +V RGK +EG+DF GR VI+
Sbjct: 560 EVKPMFVEPRNKGSFAEVMDAYYSKIACPKSNGAAFLAVCRGKASEGLDFADMNGRGVII 619
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKEG-------DFLTFDALRQAAQCVGRVIRSKAD 671
G+PF ++ ++++L + + G + A R Q +GRVIR + D
Sbjct: 620 TGLPFPPRWEPRVVLKMQFLNEMKKSNMGAQCLSGHQWYNQQASRAVNQAIGRVIRHRQD 679
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLRD----AHLNLSTDMALHIAREFLRKMAQPYD 727
YG + D R++ + R KLP W+ ++ H S + +A+E M P
Sbjct: 680 YGAIFLCDDRFTTDNVRGKLPSWVRPYVNVYDNFGHAVRSVSVFFRVAQEI---MPPPVA 736
Query: 728 KAGSIGRKTLLSQADLEKMTNDGSI 752
+ S G LS+ D+E T+ I
Sbjct: 737 QCLS-GSAVTLSENDVEPSTSSERI 760
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 145/321 (45%), Gaps = 65/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q +YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LRGVTVDFPF-QPYECQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFK 64
Query: 54 SLITSYVLSK--------PENPV--------------------KLIYCTRTVHEMEKTLA 85
I++ +++ P+ P+ K+IY +RT ++ + +
Sbjct: 65 DTISARKIAQRMNGVELFPDRPMSSWGNAATDGDIPTYYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
ELK N R KI +G SR+ LC+N V E+ CRK+ +
Sbjct: 125 ELK---NTVYR-----PKICVLG--SREQLCINPEVKRQESNHMQIYMCRKKVMA----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
C F+ N E+ ++ L + ++DL G + CPY+L+R + Q A+++
Sbjct: 170 -------RACHFYNNVEEKSTEKGLMDSIMDIEDLVKNGSKHRACPYYLSRSLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + E+ K +VV+ DEAHN++ +C E+ S + L A ++
Sbjct: 223 FMPYNYLLDAKSRRAHNIEL-KGTVVILDEAHNVERLCEESSSFDLTAYDLASAIDVINL 281
Query: 266 INQEIERFKATDAGRLRAEYN 286
+ + E+ K + AE+N
Sbjct: 282 VLE--EQAKVVQQNEVNAEFN 300
>gi|326932020|ref|XP_003212120.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Meleagris gallopavo]
Length = 1136
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 37/326 (11%)
Query: 450 QSVVITSGTLSPIDLY--------PRLL-NFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
+++++TSGTLSP+ + P LL N H + R + ++ +G D
Sbjct: 455 RTIILTSGTLSPLSSFTMEMQIPFPVLLENPHVIDKRQLWVG---------IIPKGPDGT 505
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
+++ ++ R + GK + +V +VP G++ FF SY MD+ + W + K I
Sbjct: 506 VLNSTYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFAKRIE 565
Query: 561 QHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
+ K +F+E ++ +D Y + AC GA F +V RGK +EG+DF GR VI+
Sbjct: 566 EVKPMFVEPRNKGSFAEVIDAYYGKIACPKSNGAAFLAVCRGKASEGLDFADMNGRGVII 625
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKEG-------DFLTFDALRQAAQCVGRVIRSKAD 671
G+PF ++ ++++L + + G + A R Q +GRVIR + D
Sbjct: 626 TGLPFPPRWEPRVVLKMQFLNEMKKSSMGAQYLSGHQWYNQQASRAVNQAIGRVIRHRQD 685
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLRD----AHLNLSTDMALHIAREFLRKMAQPYD 727
YG + D R++ + R KLP W+ ++ H S + +A+E + P
Sbjct: 686 YGAIFLCDDRFTTENVRGKLPSWVRPYVNVYDNFGHAVRSVSVFFRVAQEIM-----PLP 740
Query: 728 KAGSI-GRKTLLSQADLEKMTNDGSI 752
A + G LS+ D+E T+ I
Sbjct: 741 AAQCLSGSAVTLSENDVEPSTSSEQI 766
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 64/301 (21%)
Query: 25 MLELKRALDAKGHCLLEMPTGTGKTIALL-----------SLITSYVLSK--------PE 65
ML L+ K + +LE PTGTGKT+ LL I++ +++ P+
Sbjct: 6 MLALQSWSSKKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIAQRMNGVELFPD 65
Query: 66 NPV--------------------KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKIL 105
P+ K+IY +RT ++ + + ELK N R K+
Sbjct: 66 RPMSSWGNAATDGDIPAYYTDIPKIIYASRTHSQLTQVINELK---NTVYR-----PKVC 117
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
+G SR+ LC+N V E+ CRK+ + C F+ N E+ +
Sbjct: 118 VLG--SREQLCINPEVKRQESNHMQIYMCRKKVMA------------RACHFYNNVEEKS 163
Query: 166 SAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
+ L + ++DL G + CPY+L+R + Q A+++ Y YLLD K + E+
Sbjct: 164 TEKGLMDSIMDIEDLVKNGSKHRACPYYLSRSLKQQADIIFMPYNYLLDAKSRQAHNIEL 223
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY 285
K +V++FDEAHN++ +C E+ S + L A ++ + + E+ K + AE+
Sbjct: 224 -KGTVIIFDEAHNVERLCEESSSFDLTAYDLASAIDVINVVLE--EQAKVVQQNEVNAEF 280
Query: 286 N 286
N
Sbjct: 281 N 281
>gi|383862044|ref|XP_003706494.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Megachile rotundata]
Length = 974
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
S+V+TSGTLSP+ + L V + D IC VL++G D +++ F+ R+
Sbjct: 472 SIVLTSGTLSPLQPFISDLGIPIEVQLENPHIVKGDQICVGVLSQGPDGYSLNSSFNTRN 531
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ 570
DP + G+ + ++P+G++ FF SY M + W + G+ +I + K++ I
Sbjct: 532 DPKYIMSLGRTIFNFSCLIPEGLLVFFPSYPVMKKCREEWQNVGLWTKIAERKVIIIYIC 591
Query: 571 DVVE------TTLALDNYRKACD-CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
++ ++ + Y K D +GA+F +V RGKV+EG+DF GR V++ G+PF
Sbjct: 592 YIIIYIRDEFASIMSEYYEKINDPSHKGAIFMAVCRGKVSEGLDFANANGRAVLITGLPF 651
Query: 624 QYTLSKILLARLEYLR-----DTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
++ + +YL D + + +A R Q +GR+IR K DYG +I
Sbjct: 652 PPLKDPRVILKQQYLEEMKRLDKETLSGQQWYQLEASRAVNQAIGRIIRHKNDYGAIILC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R+ + +L W+ H++
Sbjct: 712 DCRFENPSFKKQLSAWLRPHVK 733
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 119/290 (41%), Gaps = 66/290 (22%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
+ +V V FP+ Y Q YM ++ L + +LE PTGTGKT++LL
Sbjct: 6 INNVIVNFPF-KPYSVQEEYMTKVIECLQNNKNGVLESPTGTGKTLSLLCSSLSWLLTRK 64
Query: 54 -SLITSYVLSKPENPV-------------------------------KLIYCTRTVHEME 81
+ ++ +NP K+IY +RT ++
Sbjct: 65 AQMQAQSLIGAVDNPTFGGHFFKKLNNELKEATGSTKPSTGFTWAAPKIIYASRTHSQLS 124
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK +H+ A L SR LC++ V N + C + S
Sbjct: 125 QAMQELK---RTSYKHVSVAV------LGSRDQLCIHPEVSKETNSSNKIHMCHSKLKS- 174
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
TC ++ N E V ++DL G++ CPYFL+R + Q
Sbjct: 175 -----------RTCFYYNNVETRKEDPFFKQEVLDIEDLVKAGQKYRCCPYFLSRELKQT 223
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSV 251
A++ Y YLLDPK ++Q VV+ DEAHNI+ +C EA S+ +
Sbjct: 224 ADITFMPYNYLLDPKSRRSQGIDLQ-NCVVLLDEAHNIEKICEEAASLQI 272
>gi|393212456|gb|EJC97956.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 863
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 452 VVITSGTLSPI-----DLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
V++ GT+SPI L+P + V + + C +VL +G + K+
Sbjct: 576 VILAGGTMSPIPDVTLQLFPTIPEDRLSVFSCGHVIPHENLKC-VVLGKGPLGRDLEFKY 634
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
R D + G+ L +VSI P+GIV FF SY+++D + + W +GIL I + K VF
Sbjct: 635 KARDDQSLTDELGQCLSNLVSISPNGIVVFFPSYTFLDRVKSRWTSNGILDRIQKKKQVF 694
Query: 567 IETQDVVETTLALDNYRKAC-----DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
E + E L +Y AC +GA+ +V K++EG++F R V++ G+
Sbjct: 695 FEPHESSEVENVLRDYSIACTQVTTGPTKGALLLAVVGAKLSEGLNFADELARAVVLVGI 754
Query: 622 PFQYTLSKILLARLEYL------RDTFQIKEGDFLTFD-ALRQAAQCVGRVIRSKADYGM 674
P+ S L R++YL R + G+ L + A+R Q +GR IR + D+
Sbjct: 755 PYPNLGSPELRERMKYLDKKMVGRGNNTGRAGNELYENLAMRAVNQSIGRAIRHQNDWAA 814
Query: 675 MIFADKRYSRHDKRSKLPGWI 695
+I D RY + KLPGWI
Sbjct: 815 LILIDNRYKSQKVQQKLPGWI 835
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 64 PENPVKLIYCTRTVHEMEKTLAEL-KLLHNYQTRHLGPAAKI-------------LAIGL 109
P + K+ + +RT ++ + + EL KL + R + ++I ++ L
Sbjct: 201 PASSTKVFFASRTHSQLSQVIHELEKLKPDGFNREIEEDSRISPRNGNGSSSPLPRSVSL 260
Query: 110 SSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAV 169
+SR +LC+N + L A D +D CR+ P + + + A+
Sbjct: 261 ASRTHLCINEK-LRARTAD-LDEGCRELLQGRQEDRCPYLPQLGEEDRLHDIRDRILAS- 317
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
P + +DL + GK+ CPYF +R V A +V Y LL + + ++ +
Sbjct: 318 -PKDI---EDLVSTGKELRLCPYFGSRSAVSSAELVTLPYNLLLHSRSRQALEIDL-TDQ 372
Query: 230 VVVFDEAHNIDNVCIE----ALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRL 281
VV+ DEAHN+ ++ LS S+ R+ ++ + SR + A RL
Sbjct: 373 VVIVDEAHNLIETLLQLHTVELSTSLLRRAIQQLAKYFSRFRTRLTTNHAVHLKRL 428
>gi|338719447|ref|XP_001492963.3| PREDICTED: regulator of telomere elongation helicase 1-like [Equus
caballus]
Length = 1344
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++++TSGTL+P+ + + V + + I V+ +G D +S+ FD R
Sbjct: 474 RTLILTSGTLAPVSSFALEMQIPFPVCLENPHVIDKHQIWVGVVPKGPDGAQLSSAFDKR 533
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W +++ K VF+E
Sbjct: 534 FSDTCLASLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAQDFARKLEALKPVFVEP 593
Query: 570 QDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + +D Y A GAVF +V RGKV+EG+DF GR VI+ G+P+ +
Sbjct: 594 RSKGGLSEVMDAYYSTVASPGASGAVFLAVCRGKVSEGLDFADTNGRGVIVTGLPYPPRM 653
Query: 628 SKILLARLEYLRDTFQIKEG---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G D+ A R Q +GRVIR + DYG +
Sbjct: 654 DPRVVLKMQFL-DEMKGQGGARGQFLSGRDWYRQQASRAVNQAIGRVIRHRHDYGAVFLC 712
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R+S D R++LP W+ H++
Sbjct: 713 DHRFSYADARAQLPSWVRPHVK 734
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 68/323 (21%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQEEYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWREHLH 64
Query: 54 --------------SLITSYVLSKPENPV---------------KLIYCTRTVHEMEKTL 84
L LS N K+IY +RT ++ + +
Sbjct: 65 DAISARKIAARAQGELFPDRALSSWGNAASDGDGDNTACYTDIPKIIYASRTHSQLTQVI 124
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
+EL+ +Y+ R L SR+ LC++ V E+ CRK+ AS
Sbjct: 125 SELRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQIHLCRKKVAS---- 170
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A++
Sbjct: 171 --------RSCHFYNNVEEKSLEQELAAPILDIEDLVKSGNRHKLCPYYLSRNLKQQADI 222
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
+ Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 IFMPYNYLLDAKSRRAHSIDL-KGTVVIFDEAHNVEKMCEESASFDL---TPHDVASGLD 278
Query: 265 RINQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ K G L E++
Sbjct: 279 VIDQVLEEQTKVAQQGDLLLEFS 301
>gi|328770056|gb|EGF80098.1| hypothetical protein BATDEDRAFT_11514, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 604
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 444 PVFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSR------SFKMSLTRDCICPMVLTRG 496
P+ + +SVV T GT+SPI D +LL P V S + + P+ +++G
Sbjct: 311 PILKQARSVVFTGGTMSPIHDFIEQLL---PSVQHDRLDVFSCGHVINSTSLLPICVSQG 367
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
L + + R D + G + +++ GIV FFVSYSY+D I+ W GI
Sbjct: 368 PTGLDFNFSHEKRVDTNMMDEAGAAIANYSNVISGGIVVFFVSYSYLDAIVKQWKSGGIW 427
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGR----------GAVFFSVARGKVAEGI 606
I + K +FIE V E L +Y R G++ +V GK++EGI
Sbjct: 428 TRISKKKKIFIEPTSVGEVDKVLQDYSSTISRSRQTDFSTSTLTGSMLLAVVSGKLSEGI 487
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE-GDFLTFD------ALRQAA 659
+F GR VIM G+PF S L R+ + KE G +T +R
Sbjct: 488 NFADDMGRAVIMVGIPFANIASIELQERMRFFDVQVNAKETGSGITGKEYYENICMRVLC 547
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
GR IR K DY ++IF D R+ R +KLP WI
Sbjct: 548 FVTGRAIRHKNDYAVIIFLDMRFKRDRIVAKLPEWI 583
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 29/193 (15%)
Query: 103 KILAIGLSSRKNLCVNSRVLAAENRDSVDAAC------RKRTASWVRALAAENPNIETCE 156
I + L SRKNLC+N V ++ ++ C + +S E+P ++
Sbjct: 1 NIKCVTLGSRKNLCINQSVTRLQSLHRINDKCLDLQKDKSSKSSGGCPYLTEDP-VQMVT 59
Query: 157 FFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPK 216
F + + + ++++ G++ CPY+ ARH + + ++ Y LL
Sbjct: 60 FDD---------TIHARIRDIEEIVQAGRKSATCPYYGARHTAKSSEIICIPYNLLLQRS 110
Query: 217 VAGIISKEMQKESVV--------VFDEAHNIDNVCIEAL-SVSVRRQTLEGATRNLSRIN 267
I ++ ++ + DEAHNI IE++ S+ +L+ + ++
Sbjct: 111 TRESIGLRLKNNIIILGKYTLFCLLDEAHNI----IESVNSLYSHTISLDQILDCKTHLS 166
Query: 268 QEIERFKATDAGR 280
+ ER+K AGR
Sbjct: 167 KYFERYKNRLAGR 179
>gi|345490538|ref|XP_001606129.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Nasonia vitripennis]
Length = 1111
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 29/303 (9%)
Query: 435 CHDASLAVKPVFDR-FQSVVITSGTLSP---------IDLYPRLLNFHPVVSRSFKMSLT 484
C ++ + D+ +SV++TSGTLSP I++ +L N H V ++
Sbjct: 459 CFSPGFGMQQLLDQGVRSVILTSGTLSPLKPFISEIGIEIGAQLENPHIVSNKQ------ 512
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
IC +++ G D +++ ++ R+DP + G+ + + I+P G++ FF SY M
Sbjct: 513 ---ICVGIISNGYDGCSLNSSYNTRNDPKYIASLGETIKILSCILPHGMLIFFPSYPIMK 569
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVE-TTLALDNYRKACD-CGRGAVFFSVARGKV 602
+ W G +I K +F+E Q + + Y+K D +GA+F +V RGKV
Sbjct: 570 KCQEEWQKMGKWSQIEASKPIFVEPQSKEGFNNVMTEYYKKIHDPAHKGAIFMAVCRGKV 629
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFDALRQ 657
+EG+DF GR V++ G+PF ++ + YL + + + +A R
Sbjct: 630 SEGLDFANANGRAVLITGLPFPPLKDPRIILKQRYLEENRASGKESLSGQQWYQLEASRA 689
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIARE 717
Q +GR+IR K DYG ++ D R+ + L WI H++ M + RE
Sbjct: 690 VNQAIGRIIRHKNDYGAILLCDCRFDNPSFKQHLSSWIRPHIKKFQ---DFRMVVKELRE 746
Query: 718 FLR 720
F R
Sbjct: 747 FFR 749
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 123/294 (41%), Gaps = 70/294 (23%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK- 63
L V + FP+ Y Q YM ++ L + +LE PTGTGKT++LL +++ K
Sbjct: 6 LNGVVIKFPF-KPYQVQEDYMKKVIECLQEGKNGVLESPTGTGKTLSLLCSSLGWLMIKK 64
Query: 64 -----------------------------------------PENPV-----KLIYCTRTV 77
P N K+IY +RT
Sbjct: 65 AQIQIQVQSLGALDQVGSGNSYLDQFAKSLDKGGGKSTNQAPTNTFGWSMPKIIYASRTH 124
Query: 78 HEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKR 137
++ + + ELK RH+ L SR LC++ V +N + C+ +
Sbjct: 125 SQLSQAMQELK---RTSYRHVSVTV------LGSRDQLCIHPEVAKEQNTSNKIHMCQAK 175
Query: 138 TASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARH 197
+ A N C ++ N E + + ++DL G++ CPYFL++
Sbjct: 176 -------IKARN-----CFYYNNVELRKDDPTIKDNILDIEDLVKTGQKLKCCPYFLSKE 223
Query: 198 MVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSV 251
+ Q A+++ Y YLLDPK E+Q +VV+ DEAHN++ +C +A S+ +
Sbjct: 224 LKQNADIIFMPYNYLLDPKTRKNQGIELQ-NNVVLLDEAHNVEKMCEDAASLQI 276
>gi|38707232|gb|AAR27234.1| DEAH helicase isoform 1 [Mus musculus]
Length = 1209
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|262263441|ref|NP_001001882.3| regulator of telomere elongation helicase 1 isoform 1 [Mus
musculus]
Length = 1209
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|38707240|gb|AAR27238.1| DEAH helicase isoform 6 [Mus musculus]
Length = 1128
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|296481054|tpg|DAA23169.1| TPA: regulator of telomere elongation helicase 1 [Bos taurus]
Length = 583
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 145/621 (23%), Positives = 251/621 (40%), Gaps = 130/621 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L+ VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LKGVTVDFPFQP-YKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLR 64
Query: 55 --------------------LITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
+ S+ + PE V K+IY +RT ++ + ++E
Sbjct: 65 DAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ N R ++ +G SR+ LC++ V E+ CR++ AS
Sbjct: 125 LR---NTSYR-----PRVCVLG--SREQLCIHPEVKKQESNHMQVHLCRRKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLD K ++ K +VV+FDEAHN++ +C EA S + + + R+
Sbjct: 223 MPYNYLLDAKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRV 281
Query: 267 NQEIERFKATDAGRLRAEY--NRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRA 324
+ ER K L E+ + GL L P D+ K
Sbjct: 282 LE--ERTKVAQQAELHPEFSADSARSGLNLE-------------PEDLAK---------- 316
Query: 325 EHFLHVLRRLVQYLRG-----RLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
L+ ++ L G L +N P S++ + A A I +T + L
Sbjct: 317 ------LKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQITFQTKGCILDSLDQ 370
Query: 380 LMLTLE-----ITDTDEFLHIQTIC-----------DFATLVGTYTRGFSIII------- 416
L+ L T+T + I D +VG ++ + + I
Sbjct: 371 LIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVGLASQSYKVHIHLDAGHR 430
Query: 417 ------EPFDERMPHIPDPVLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLL 469
+ ++ P VL C +++ + + +++++TSGTL+P+ + +
Sbjct: 431 RTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEM 490
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
V + + I V+ +G D +S+ FD R + GK+L + +V
Sbjct: 491 QIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVV 550
Query: 530 PDGIVCFFVSYSYMDEIIATW 550
P G++ FF SY M++ + W
Sbjct: 551 PHGLLVFFPSYPVMEKSLEFW 571
>gi|1666897|gb|AAB18751.1| CHL1 protein, partial [Homo sapiens]
Length = 556
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 210/503 (41%), Gaps = 41/503 (8%)
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
V ++ L A GK+ CPY+ +R + A +VV YQ LL +Q + VV+
Sbjct: 59 VKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQ-DQVVII 117
Query: 234 DEAHNIDNVCIEALSVSVR-RQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGL 292
DEAHN+ + SV V Q + ++ L + + +R KA + L+ L + +
Sbjct: 118 DEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFV 177
Query: 293 A-LRGNL---PNAW-LSNPALP----SDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLE 343
A L GN+ PN LS +D L ++ NI + V R + + R
Sbjct: 178 AVLGGNIKQNPNTQSLSQTGTELKTINDFLFQSQIDNI----NLFKVQRYCEKSMISRKL 233
Query: 344 TENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE------ITDTDEFLHIQT 397
E+ G V AG Q +L + + +HI+
Sbjct: 234 FGFTERYGAVFSSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIE- 292
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
F + T + +I+ R + L+ + ++ V ++VVI G
Sbjct: 293 --GFLAALTTANQDGRVILS----RQGSLSQSTLKFLLLNPAVHFAQVVKECRAVVIAGG 346
Query: 458 TLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P+ D +LL VV S + D I P+V+ G P+ F R
Sbjct: 347 TMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKREL 406
Query: 512 PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ- 570
P + G++L + +VP G+VCFF SY Y+ ++ A W G+L + K +F E +
Sbjct: 407 PQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKS 466
Query: 571 --DVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
V + LA +AC R GA+ SV GK++EGI+F + GR V+M G+PF
Sbjct: 467 AHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFP 526
Query: 625 YTLSKILLARLEYLRDTFQIKEG 647
S L ++ YL T G
Sbjct: 527 NIRSAELQEKMAYLDQTLAGPSG 549
>gi|38707236|gb|AAR27236.1| DEAH helicase isoform 3 [Mus musculus]
Length = 1164
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|262263443|ref|NP_001160137.1| regulator of telomere elongation helicase 1 isoform 2 [Mus
musculus]
gi|229891754|sp|Q0VGM9.2|RTEL1_MOUSE RecName: Full=Regulator of telomere elongation helicase 1
gi|148878220|gb|AAI45659.1| Rtel1 protein [Mus musculus]
gi|219519260|gb|AAI44979.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|38707234|gb|AAR27235.1| DEAH helicase isoform 2 [Mus musculus]
Length = 1203
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|148675458|gb|EDL07405.1| regulator of telomere elongation helicase 1 [Mus musculus]
Length = 1273
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 439 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 498
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 499 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 558
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 559 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 618
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 619 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 677
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 678 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 720
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|38707238|gb|AAR27237.1| DEAH helicase isoform 5 [Mus musculus]
Length = 1170
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|50510779|dbj|BAD32375.1| mKIAA1088 protein [Mus musculus]
Length = 1211
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 454 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 513
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 514 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 573
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 574 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 633
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 634 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 692
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 693 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 735
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 8 LNGVTVDFPF-QPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 66
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 67 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 126
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 127 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 171
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 172 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 224
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 225 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 280
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 281 INQVLEEQARVTQQGELQQEF 301
>gi|149033944|gb|EDL88727.1| similar to helicase-like protein NHL isoform 2 [Rattus norvegicus]
Length = 1264
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 143/282 (50%), Gaps = 11/282 (3%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ + + +++++TSGTL+P+ + + V + ++ +
Sbjct: 439 VLSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 498
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 499 WVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLE 558
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ K++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 559 FWQAQGMSKKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPGSNGATFLAVCRGKASEGL 618
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-------RDTFQIKEG-DFLTFDALRQA 658
DF GR VI+ G+P+ + ++ ++++L R Q G ++ A R
Sbjct: 619 DFSDMNGRGVIVTGLPYPPRMDPRVILKMQFLDEMKGRSRVGGQCLSGQEWYQQQASRAV 678
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R+ LP W+ +L+
Sbjct: 679 NQAIGRVIRHRHDYGAIFLCDHRFAYADARAHLPSWVRPYLK 720
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 144/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWRSAADANGDSIDCYTDIPKIIYASRTHSQLTQVIG 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHNIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEV 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + G L+ E+
Sbjct: 279 INQVLEEQARVAQHGELQQEF 299
>gi|262263449|ref|NP_001160140.1| regulator of telomere elongation helicase 1 isoform 5 [Mus
musculus]
Length = 1128
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|262263445|ref|NP_001160138.1| regulator of telomere elongation helicase 1 isoform 3 [Mus
musculus]
Length = 1170
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|262263447|ref|NP_001160139.1| regulator of telomere elongation helicase 1 isoform 4 [Mus
musculus]
gi|219521615|gb|AAI44978.1| Rtel1 protein [Mus musculus]
Length = 1164
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|357159919|ref|XP_003578599.1| PREDICTED: uncharacterized protein LOC100829852 [Brachypodium
distachyon]
Length = 1225
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 168/702 (23%), Positives = 277/702 (39%), Gaps = 167/702 (23%)
Query: 12 FPYDNIYPEQYSYMLELKRALD-----AKGHCLLEMPTGTGKTIALLSLITSYV------ 60
FPY Y Q ++M + LD + H LLE PTGTGK+++LL ++
Sbjct: 39 FPY-KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLR 97
Query: 61 ----------------------------------LSKPENPVKLIYCTRTVHEMEKTLAE 86
+K +N + Y TRT ++ + + E
Sbjct: 98 APPAPPAADPFLHGGGFVPDDTQQQQATPGVPEKAAKKKNAPTIYYATRTHSQITQVVRE 157
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ +Y+ R +A+ L+SRK+ CVN V ++N +D C+ L
Sbjct: 158 LRKT-SYRVR--------MAV-LASRKHYCVNKNVCMSDN---IDEQCK---------LL 195
Query: 147 AENPNIETCEFFENYEKAASAAVLPPG----VYTLQDLRAFGKQQGWCPYFLARHMVQFA 202
++ ++ C F+N +K + L G V+ ++DL G+Q CPYF A+ M + A
Sbjct: 196 LDD-KVQGCPEFKNAQKLSRHPSLQKGGCYEVHDIEDLLRVGRQVKGCPYFAAQTMAETA 254
Query: 203 NVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQ---TLEGA 259
+V Y YL+ P V + ++ S+V+ DEAHNI+++ +A SV V + TL G
Sbjct: 255 QLVFCPYNYLISPIVRRAMDIDISG-SIVILDEAHNIEDIARDAGSVDVDEESLTTLAGE 313
Query: 260 TRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPG 319
NL+ N+ + ++ + ++EGL W+++ G
Sbjct: 314 LANLA-TNEAV--------AKIYQPLHEVIEGLI-------NWITDQV-----------G 346
Query: 320 NIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS 379
N+R E F H + G EN KE AGI E
Sbjct: 347 NLRDNE-FEHP----ASFWTG----ENAMKE---------LQKAGITPAYFPILQECATK 388
Query: 380 LMLTLEITDTD-EFLHIQTICDFATLVGTYTRGFS----------IIIEPFDERMPHI-- 426
+ T++D E+L + + +L + + F+ + + F +R
Sbjct: 389 AVKAASDTESDGEYLTGRGVMTLDSLFSSLSHFFAGNGCHFYDYQLAFQHFVQREGSSSV 448
Query: 427 --PDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
V+ L C ++ + + D SV++TSGTLSP+ + L +
Sbjct: 449 IGSRSVMSLWCLSPAVVFQGISDLTLSVILTSGTLSPMGSFASELGVQFDACMEAPHVID 508
Query: 485 RDC-ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
D + V++ G + P++ + G + E+ IVP G + FF SY +
Sbjct: 509 ADSQVFASVISSGPTKYPLNASYKTADVYSFQDELGASIEEICRIVPGGALVFFPSYKLL 568
Query: 544 DEIIATWNDSGILKEIMQHKLVFIETQDVVETTLA-LDNYRKAC------DCGR------ 590
D++ W +G + +K VF+E + E L Y A GR
Sbjct: 569 DKMKVRWAQTGQWARLHANKPVFVEPRGSTEELEPILKGYYDAILGKAPLKKGRGGAKQI 628
Query: 591 ----------------GAVFFSVARGKVAEGIDFDRHYGRLV 616
GA F +V RGKV+EGIDF R+V
Sbjct: 629 VKNRVRKNSSQESAKGGAAFLAVCRGKVSEGIDFSDDNARVV 670
>gi|302756033|ref|XP_002961440.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
gi|300170099|gb|EFJ36700.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
Length = 787
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 19/293 (6%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++V+TSGTLSP++ + L V + + I V++ G +++ + R
Sbjct: 430 RTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGANQIWVGVVSSGPSGRALNSSYRTR 489
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHK 563
P + G +V IVP+G++ FF SY ++ + +W N + + I +HK
Sbjct: 490 DSPEYKNDLGNTIVNFARIVPNGLLVFFPSYYLLNSCVDSWQTPNQVNGHTLWERICKHK 549
Query: 564 LVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
+E ++ A +++ + G GAVFF+V RGKV+EG+DF GR VI+ G+
Sbjct: 550 QPVVEPKESALFNQAHEDFLAKVKDSTGTGAVFFAVCRGKVSEGLDFADETGRAVIVTGM 609
Query: 622 PFQYTLSKILLARLEYLRD--------TFQIKEG-DFLTFDALRQAAQCVGRVIRSKADY 672
PF + + +YL + T ++ G D+ A R Q VGRVIR K DY
Sbjct: 610 PFAMKTDPKVRLKRQYLDEEGRRTKTSTRKVLTGEDWYVQQASRAVNQAVGRVIRHKNDY 669
Query: 673 GMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
G +I D+R+++ +S+L W+ H++ + D A + R F K QP
Sbjct: 670 GAIILCDERFAQAGAQSQLSLWLRPHVK--LYSKFGDAAFTLTRFFKDKKPQP 720
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 138/294 (46%), Gaps = 51/294 (17%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--V 60
+KL+ V V FPYD Y Q YM + AL + LLE PTGTGKT+ LL ++
Sbjct: 5 YKLKGVDVRFPYD-AYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAWRES 63
Query: 61 LSKPE--------------NPVK---------LIYCTRTVHEMEKTLAELKLLHNYQTRH 97
L+ P+ +P +IY +RT ++++ + ELK +Y+
Sbjct: 64 LAPPDRGRRMSASSQSSDLDPTSSQEANKLPTVIYASRTHSQLQQVIHELKAT-SYR--- 119
Query: 98 LGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEF 157
K++A+G SR+ LC+ V R + + ACR T+ R + E+
Sbjct: 120 ----PKMVALG--SREQLCIEKDVQKLRGR-AQNNACR--TSCKARKCYH---HTRVNEY 167
Query: 158 FENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
+N + + + ++DL G+ G CPYFL+R + +++ Y YL+D +
Sbjct: 168 LKNNPELGNEPI------DIEDLVRIGRTHGPCPYFLSRELHGSVDMIFVPYNYLIDKEN 221
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE 271
++ + SV++FDEAHN++ VC +A S + TL +S Q +E
Sbjct: 222 RKSLTGIRWENSVIIFDEAHNLEGVCADAASFDLPTTTLSAC---ISEAGQCVE 272
>gi|322792265|gb|EFZ16249.1| hypothetical protein SINV_00648 [Solenopsis invicta]
Length = 599
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 152/317 (47%), Gaps = 36/317 (11%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPID--------LYPRLLNFHPVVSRSFKM 481
L++ C + ++ P+ +SV++ SGTL+P +PR++N + ++ +
Sbjct: 294 TLKVICMNPAVTFAPLARDTRSVILASGTLTPTTSFQSELGTKFPRIVNPNHIIPK---- 349
Query: 482 SLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYS 541
D I + R + ++ + N G L++++ VP G++CFF SY
Sbjct: 350 ----DQIYIRCIPRAPNGQSFKVVYEEVNKWTFQDNLGNLVIQVCDAVPYGVLCFFSSYH 405
Query: 542 YMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR--------GAV 593
M+ I W ++ + ++ K +F+E +D E ++ YR + GA+
Sbjct: 406 VMNTICNRWKENKMWDKLSTLKTIFMEPKDHRENHQVMEEYRSVIEKSSTQSFRDSCGAL 465
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----D 648
F+V RGK+AEGIDF + R V+ G+P+ + S + ++ Y + I +G +
Sbjct: 466 LFAVFRGKMAEGIDFSDNEARCVLAIGIPY-FRQSNDITMKMNY--NDANISKGLLSGRE 522
Query: 649 FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLST 708
+ T +A R Q +GR +R D+G ++ D+R+ + LP WI +++ + NL
Sbjct: 523 WYTVNAFRALNQAIGRCVRHINDWGAVLLIDERHMQSKNNDYLPKWIKQNMKSNNTNLDI 582
Query: 709 DM----ALHIAREFLRK 721
++ A+ ARE RK
Sbjct: 583 ELQDFVAIQAARESERK 599
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 26/192 (13%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ Y TRT ++ + + ELK K + I LSSR + C+ NR+
Sbjct: 7 KIYYGTRTHKQIAQVVKELK--------RTAYKHKRMTI-LSSRDHTCIQQ-----TNRN 52
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFF-ENYEKAASAAVLPPGVYTLQDLRAFGKQQ 187
D L + N +TC ++ E+ +K AS P + ++DL + G
Sbjct: 53 KNDLC---------NELLDPHKN-KTCPYYNEHSKKKASIFGSMPTPWDIEDLVSLGNSI 102
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEAL 247
G CPYF AR ++ A+++ Y Y+LDP + + ++ + +V+ DEAHNI+++C EA
Sbjct: 103 GACPYFGARSLMTKADIIFCPYNYILDPAIRESMQIRLRGD-IVILDEAHNIEDICREAA 161
Query: 248 SVSVRRQTLEGA 259
+V +R + A
Sbjct: 162 NVILRDDEINTA 173
>gi|400603430|gb|EJP71028.1| DNA repair helicase [Beauveria bassiana ARSEF 2860]
Length = 868
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 38/286 (13%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSL--------TRDCICPMVLTRGSDQLP 501
++V++ GT+SP + Y + P + +S +L T C+ + +R P
Sbjct: 561 RAVILAGGTMSPFEDYKD--HLFPALDQSKITTLSCGHVIPSTNLCVRTLAASRAGGP-P 617
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-----NDSGIL 556
+ R D + G ++ M SIVPDG+V FF SY Y+D+++ W D+
Sbjct: 618 FEFSYQRRGDEEMIGQLGLAILNMCSIVPDGVVVFFPSYGYLDQVVEVWKKKRAGDAQST 677
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKA---CDCGRGAVFFSVARGKVAEGIDFDRHYG 613
E ++ K ++ + L Y +A G GA+ SV GK++EGI+F G
Sbjct: 678 WERLKSKKTILQESKGASSDEVLQKYSEAILGSQAGGGALLLSVVGGKMSEGINFSDRLG 737
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQIK-------------------EGDFLTFDA 654
RLV + G+P+ S A++EY+ + + + DF
Sbjct: 738 RLVAVVGLPYPNVASPEWRAKMEYIESSTRTRLLERGGITPTEASSRAKQVARDFYENSC 797
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+R Q +GR IR + DY ++ DKRY+ R KLPGWI L+
Sbjct: 798 MRAVNQSIGRAIRHRGDYAAIVLLDKRYTSERIRKKLPGWIQGGLQ 843
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 34/193 (17%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKL----------LHNYQTRHLGPAAKILAIGLSSRKN 114
E +K+ Y +RT ++ + + EL+ L + + K+L LSSR+
Sbjct: 205 EEEIKIYYTSRTHSQLSQFITELRRPKFPASLPEGLSSADAKAQDELVKLLP--LSSRQK 262
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE--------KAAS 166
LC+N V ++ +++ C A + + C+F E + +
Sbjct: 263 LCINPSVSRLKSVQAINDRC---------AELQQPKSSRKCDFVPREELLAQTHEFRDTA 313
Query: 167 AAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226
A +P ++DL GK CPY+ +R + A +V Y LL + +++
Sbjct: 314 LATIP----DIEDLHQLGKSLQVCPYYASRTALPGAEIVTLPYPLLLQKSARDALGIKLE 369
Query: 227 KESVVVFDEAHNI 239
+VV+ DEAHNI
Sbjct: 370 G-NVVIVDEAHNI 381
>gi|345319470|ref|XP_001519583.2| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like, partial [Ornithorhynchus anatinus]
Length = 226
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 90/140 (64%), Gaps = 2/140 (1%)
Query: 273 FKATDAGRLRAEYNRLVEGLALRGNL--PNAWLSNPALPSDILKEAVPGNIRRAEHFLHV 330
K TD RL EY RLVEGL G +A L+NP LP IL+EAVPG+IR AEHF+
Sbjct: 87 IKETDEQRLHEEYRRLVEGLREAGAARETDAHLANPVLPDAILQEAVPGSIRTAEHFVGF 146
Query: 331 LRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
LRRL+++L+ RL ++ +E P +F+ + I K LRFC ERL SL+ TLEI+D
Sbjct: 147 LRRLLEFLKWRLRVQHAVQESPAAFLGGLAQRVCIPPKPLRFCAERLRSLLHTLEISDLT 206
Query: 391 EFLHIQTICDFATLVGTYTR 410
+F + + +FATLV TYT+
Sbjct: 207 DFSPLTLLANFATLVSTYTK 226
>gi|321476840|gb|EFX87800.1| hypothetical protein DAPPUDRAFT_311920 [Daphnia pulex]
Length = 824
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 146/285 (51%), Gaps = 18/285 (6%)
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP 490
L L C ++++ + + + +S+++TSGTLSP+ Y L+ FK++L + + P
Sbjct: 367 LNLWCLNSAVVMHEIKESTRSIIVTSGTLSPLASYQSELDI------DFKLTLEANHVIP 420
Query: 491 M------VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+++G ++ F + G+L + + +P G++CF SYS ++
Sbjct: 421 AKRVWIGTISQGPRNTLLNGTFKVTGTFEYQDELGRLALSVCQTIPHGVLCFLPSYSLLE 480
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC-DCGRGAVFFSVARGKVA 603
+++ W D+G+ + + +K + E++D + L ++ A D GA+ +V RGKV+
Sbjct: 481 KLVTRWQDTGLWQHLSNYKTIVCESRDSRDFEETLKSFYSAIEDSVNGALMLAVCRGKVS 540
Query: 604 EGIDFDRHYGRLVIMFGVPF-QYTLSKILLARL---EYLRDTFQIKEGDFLTFDALRQAA 659
EG+DF + R VI G+PF + +++ L R + T + ++ A R
Sbjct: 541 EGLDFTDNNARAVICVGIPFPNFKDTQVELKRQYNDKLSASTPLLNGSEWYEIQAFRALN 600
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKR-SKLPGWILSHLRDAH 703
Q +GR IR KAD+G ++ D R+++ + ++L W+ S +R H
Sbjct: 601 QALGRCIRHKADWGAILLVDDRFAKTPRYVNQLSKWVRSSIRHFH 645
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
++DL + G++ CPY+ +R M + A +V Y YL+DP+V + + +++++ DEA
Sbjct: 123 IEDLVSLGRRIRVCPYYASRDMSEQAQIVFSPYNYLIDPRVRQSMKIPI-NDNIIILDEA 181
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
HNI++ E+ S ++ A + +I
Sbjct: 182 HNIEDSARESAGGSWSQEDFRLALNDCEKI 211
>gi|300797873|ref|NP_001178786.1| regulator of telomere elongation helicase 1 [Rattus norvegicus]
gi|229891752|sp|Q5RJZ1.2|RTEL1_RAT RecName: Full=Regulator of telomere elongation helicase 1
Length = 1274
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 143/282 (50%), Gaps = 11/282 (3%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ + + +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGVIPRGPDGVQLSSAYDKRFSEECLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ K++ K +F+E ++ + +D Y + A GA F +V RGK +EG+
Sbjct: 572 FWQAQGMSKKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPGSNGATFLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-------RDTFQIKEG-DFLTFDALRQA 658
DF GR VI+ G+P+ + ++ ++++L R Q G ++ A R
Sbjct: 632 DFSDMNGRGVIVTGLPYPPRMDPRVILKMQFLDEMKGRSRVGGQCLSGQEWYQQQASRAV 691
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R+ LP W+ +L+
Sbjct: 692 NQAIGRVIRHRHDYGAIFLCDHRFAYADARAHLPSWVRPYLK 733
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWRSAADANGDSIDCYTDIPKIIYASRTHSQLTQVIG 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTSYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHNIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEV 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + G L+ E+
Sbjct: 279 INQVLEEQARVAQHGELQQEF 299
>gi|301780626|ref|XP_002925736.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Ailuropoda melanoleuca]
Length = 1303
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
++++TSGTL+P+ + + V + R + ++ +G D +S+ FD R
Sbjct: 472 HTIILTSGTLAPLASFALEMQIPFPVCLENPHVIDRQQMWVGIVPKGPDGAQLSSAFDKR 531
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W +++ K VF+E
Sbjct: 532 FSDACLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAHDFARKLEALKPVFVEP 591
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + +D Y R A GAVF +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 592 RSKGGFSEVVDAYYTRAASPGSSGAVFLAVCRGKASEGLDFADMNGRGVIVTGLPYPPRM 651
Query: 628 SKILLARLEYLRDTFQIKEG---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G ++ A R Q +GRVIR + DYG +
Sbjct: 652 DPRVVLKMQFL-DELKGRGGPGGQVLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLC 710
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H++
Sbjct: 711 DHRFAHADARAQLPSWVRPHVK 732
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 136/305 (44%), Gaps = 65/305 (21%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSL--------- 55
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 56 ---------------------ITSYVLSKPENPV--------KLIYCTRTVHEMEKTLAE 86
++S+ + + + K+IY +RT ++ + ++E
Sbjct: 65 DAVSARKIAERAQGELFLDRTLSSWGVGTSDGDITGCYADIPKIIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ +Y+ R L SR+ LC++ V E+ CRK+ AS
Sbjct: 125 LRNT-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQIHLCRKKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVRSGNKHKLCPYYLSRNLKQQADIIF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YLLD K S ++ K ++V+FDEAHN++ +C E S + L L I
Sbjct: 223 MPYNYLLDAKSRRAHSIDL-KGTIVIFDEAHNVEKMCEETASFDLTPHDL---ASGLDAI 278
Query: 267 NQEIE 271
+Q +E
Sbjct: 279 DQVLE 283
>gi|19074028|ref|NP_584634.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|19068670|emb|CAD25138.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|449329243|gb|AGE95516.1| ATP-dependent DNA-binding helicase [Encephalitozoon cuniculi]
Length = 678
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 162/741 (21%), Positives = 303/741 (40%), Gaps = 131/741 (17%)
Query: 4 KLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY---- 59
K+ V + P++ YP Q M +L L + L+E PTGTGK+++++ + Y
Sbjct: 5 KISGVPIEMPFEP-YPAQIVTMTKLISCLMTRTSGLVESPTGTGKSLSIICAVLGYNEHL 63
Query: 60 ------VLSKP------------ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPA 101
+ +K E +K+I C+RT ++++ + +L+ Q R P
Sbjct: 64 KRSIRGIGAKRREGGGPKGEEAREEKLKIIICSRTHKQLDQLVDQLR---KTQYR---PR 117
Query: 102 AKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY 161
ILA SR C++ ++ ++++ C + S +C +F
Sbjct: 118 ISILA----SRAQYCISPKLSDVADKNT---GCSELVKSG------------SCAYFTGK 158
Query: 162 EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
++ A + ++ +++L+ G++ CPY+ +R + + A V+ Y YL+D ++
Sbjct: 159 DRLAKK--VGDKIFDIEELKGEGRRCVGCPYYASRILNEDAEVIFAPYNYLIDSRIREST 216
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI-ERFKATDA-G 279
++ SVV+ DEAHNI++VC + S+ E ++R + I EI K + A G
Sbjct: 217 GISLEN-SVVIVDEAHNIEDVCRSSGSI-------ELSSRIMEIIQNEILGAVKRSGALG 268
Query: 280 RLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR 339
+R ++ L++ L A +D G R R + ++
Sbjct: 269 EIRMDFVNLMDFFR--------KLREGAESTDEFDRVTAGGKLRI--------RKGREIK 312
Query: 340 GRLETENVEKEGPVSFVASITA-HAGIDQKTLR-----FCYERLHSLMLTLEITDTDEFL 393
LE + KE + SI A D K L E L S++ + +D D +
Sbjct: 313 EELERMGIGKEFVLKIKNSIYAIQKSEDAKDLLNVSTFHVLEGLDSVLSAIHFSDCDAYS 372
Query: 394 HIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVV 453
+ + + + + FS D + + +SVV
Sbjct: 373 FVFHKMNDENVKNSRSCRFS-----------------YNFWLLDGGYTFRSFVGKVRSVV 415
Query: 454 ITSGTLSPIDLYPRLLNF---HPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
+ SGTL+P + L H +V+ +T+ + + +G + + +
Sbjct: 416 LLSGTLTPFSSFSSELGHEFAHTIVAPHL---ITQKQVFVSCVRKGHLLKELIGTYGVSD 472
Query: 511 DPGVARNYGKLLVEMVSIVPD--GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE 568
P +++V++ + D G + F SYS++ E +Q ++ +
Sbjct: 473 TPQYLDQLCRVIVDVSCKIKDHGGTLVFVPSYSFL--------------ENLQKRMGGVS 518
Query: 569 TQDVVETTLALDN--------YRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
+ +VE N Y+ + AVF V RGK +EGIDF + R VI G
Sbjct: 519 SGLLVEPKSGAGNEFEKVMRRYKNRIATKQSAVFMCVYRGKASEGIDFKDSFARAVIAVG 578
Query: 621 VPFQYTLSKILLARLEYLRDTFQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
+P+ + + E+ D ++ G + A R Q +GR IR K D+G+++ D
Sbjct: 579 IPYPSLHDPQVELKKEF-NDKYKSFNGRLWYEAQAFRAVNQALGRAIRHKDDWGIVMLLD 637
Query: 680 KRYSRHDKRSKLPGWILSHLR 700
RYS +S+L W+ +++
Sbjct: 638 SRYSEKRVQSQLSKWVAENIK 658
>gi|432091451|gb|ELK24533.1| Putative ATP-dependent RNA helicase DDX11-like protein 8 [Myotis
davidii]
Length = 872
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 486 DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
D I P+VL G + + R P + G++L + ++VP G++CFF SY Y +
Sbjct: 622 DNILPLVLCSGPSNQQLEFTYLKRELPQMMDETGRILCNLCNVVPGGVICFFPSYEYQRQ 681
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG-------RGAVFFSVA 598
+ A W+ SG+L + K +F E + + L Y + C GA+ SV
Sbjct: 682 VHAHWDKSGLLARLAVRKKIFQEPKRANQVEQVLTEYSRCIQCHGQAGGMVNGALLLSVV 741
Query: 599 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL--- 655
GK++EGI+F GR V+M G+P+ S L ++ YL T G AL
Sbjct: 742 GGKMSEGINFSDDLGRCVVMVGLPYPNIKSPELQEKMAYLDHTLPRTPGQAPPGKALVEN 801
Query: 656 ---RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+ Q +GR IR + D+ ++ D+RY+R +KLP WI
Sbjct: 802 LCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWI 844
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLC+N V +
Sbjct: 192 TKIYYCSRTHSQL------AQFVHEVQKSPFGKDTRLVSLG--SRQNLCINQEVKNLGSV 243
Query: 128 DSVDAAC----RKRTASWVRALAAE-----NPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
++ C R R S RA E C F+ + + V ++
Sbjct: 244 QLINDRCMELQRSRHESKSRAEDQEPKRKRQAPQAACPFYSHRHLQLLQDQVLLEVKDIE 303
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ G CPY+ +R + A VVV YQ LL +Q + VV+ DEAHN
Sbjct: 304 QLVALGKEAGACPYYGSRFAIPAAQVVVLPYQMLLHTATRQATGIRLQGQ-VVIIDEAHN 362
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ + S V L A S++ Q +ER++ RL+A+
Sbjct: 363 LIDTITGIHSTEVSGSQLCQAH---SQLLQYMERYRK----RLKAK 401
>gi|428183991|gb|EKX52847.1| hypothetical protein GUITHDRAFT_39398, partial [Guillardia theta
CCMP2712]
Length = 719
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 435 CHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVL 493
C A + ++ + + +++V+ SGTLSP+ + + V + ++ + I VL
Sbjct: 422 CFSAGVTMRDILQQGVRNIVLASGTLSPMSSWSIEMEMKFEVVLENEHVISDEQIFAAVL 481
Query: 494 TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
RG +++ + + + + + G ++V IVPDG++ FF SYS + I W +
Sbjct: 482 RRGPRGTVLNSSYRNKDNKEMIHDLGNVIVNTCRIVPDGLLVFFPSYSALTNTIQEWQNV 541
Query: 554 GILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRH 611
GI I +HK VF+E ++ + Y + D GA+ +V RGK++EGIDF
Sbjct: 542 GIWDRIARHKHVFVEPRESANFKATVTAYTEQVDKQGSVGAILMAVCRGKMSEGIDFADR 601
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYL--------RDTFQIKEGD-FLTFDALRQAAQCV 662
+GR VI+ G+PF L ++ + Y+ +D+ G+ + A R Q +
Sbjct: 602 HGRAVIITGLPFPALLDPRVVLKRSYMDEVAGRQPKDSSTTVNGEKWYMQQAARAVNQAI 661
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
GRVIR K D+G ++ D+R++ ++ L W+
Sbjct: 662 GRVIRHKEDFGAILLCDERFAGWTRQPLLSRWV 694
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 55/272 (20%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKG-HCLLEMPTGTGKTIALLSLITSY------- 59
V V FP+ Y Q + L AL A G H LLE PTGTGKT+ LL + +
Sbjct: 4 VRVEFPF-RPYGSQVRLLEALIDALSAPGRHALLESPTGTGKTLCLLCGVLGWKNSSKVS 62
Query: 60 ---------------VLSKPENP--VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA 102
+ P +P +L+Y +RT ++ + + EL+ +Y+ R
Sbjct: 63 SQSSLPPELASLPPSMHPLPSSPGSSRLVYMSRTHGQLTQVVRELRA-SSYKPR------ 115
Query: 103 KILAIGLSSRKNLCVNSRVLAAENRDSV-DAACRKRTASWVRALAAENPNIETCEFFENY 161
+A+ L SR+ LC++ V ++ R S +AAC K + + C ++ N
Sbjct: 116 --MAV-LGSRQQLCIHPEV--SKLRGSAQNAACSKLVGA------------QACGYYRNV 158
Query: 162 --EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAG 219
K V+ + ++DL G CPY+L+R + A VV Y YL DP
Sbjct: 159 MDHKHERKEVVEE-LMDIEDLCKHGTTHKVCPYYLSRDLSSDAEVVFMPYNYLTDPASRK 217
Query: 220 IISKEMQKESVVVFDEAHNIDNVCIEALSVSV 251
+ + K+S+VV DEAHN++ +C +A S +
Sbjct: 218 SL-LHLWKDSIVVIDEAHNMETICSDAASFDI 248
>gi|242207140|ref|XP_002469424.1| predicted protein [Postia placenta Mad-698-R]
gi|220731453|gb|EED85297.1| predicted protein [Postia placenta Mad-698-R]
Length = 785
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 22/280 (7%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPID--LYPRLLNFHPVVSRSFKMS--LTRDCICPMV 492
+ S + + D +S+V+ GT+SP+ ++ + P R+F + + +V
Sbjct: 478 NPSTHFRELIDIARSIVLAGGTMSPVSDVIHQLFMGLEPSRIRTFSCGHIIPTSNLQTLV 537
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
L +G + K++ R + + G++L+ V++VP G+V F SYS++ +++ W
Sbjct: 538 LKKGPRGGDLLFKYEQRGNQAIIAELGQILLNFVNVVPGGMVVFLPSYSFLHTMMSAWEG 597
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHY 612
SG+++++ K VF E QD + L Y +A GA+ F+V K++EG++F
Sbjct: 598 SGLMEKLKSRKRVFSEPQDAGQIEAVLREYSEAIHR-TGALLFAVVGAKLSEGLNFTDDL 656
Query: 613 GRLVIMFGVPFQYTLSKILLARLEYLRDTFQ--------IKEGDFLTFDA---------L 655
R V++ G+PF S L R+ Y+ Q + +G T DA +
Sbjct: 657 ARAVLIIGLPFANLASPELRERMSYVNRLEQQLRAKGDAVTKGASATKDAATELYENMCM 716
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
Q +GR IR + D+ +I D RY+ R+KLP WI
Sbjct: 717 NAVNQSIGRAIRHRGDWASLILIDGRYASSRIRNKLPKWI 756
>gi|449274178|gb|EMC83461.1| Regulator of telomere elongation helicase 1, partial [Columba
livia]
Length = 1124
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 130/256 (50%), Gaps = 12/256 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++++TSGTLSP+ + + VS + + + ++ +G D +++ ++ R
Sbjct: 473 RTIILTSGTLSPLSSFTMEMQIPFPVSLENPHVIDKHQLWVGIIPKGPDGTVLTSTYERR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK + +V +VP G++ FF SY MD+ + W + + I + K +F+E
Sbjct: 533 FSGDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFARRIEEVKPMFVEP 592
Query: 570 QD---VVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
++ E +D + C GA F +V RGK +EG+DF GR VI+ G+PF
Sbjct: 593 RNKGSFAEVDYLMD--KVVCPKSNGAAFLAVCRGKASEGLDFADVNGRGVIITGLPFPPR 650
Query: 627 LSKILLARLEYLRDTFQIKEG-------DFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
L ++ ++++L + G ++ + A R Q +GRVIR + DYG + D
Sbjct: 651 LEPRVVLKMQFLDELRSSGAGTQYLSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFLCD 710
Query: 680 KRYSRHDKRSKLPGWI 695
R++ D RSKLP W+
Sbjct: 711 HRFTTGDVRSKLPSWV 726
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 144/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L + V FP+ YP Q +YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGIAVDFPF-QPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWREHFK 64
Query: 54 SLITSYVLSK--------PENPV--------------------KLIYCTRTVHEMEKTLA 85
I++ +++ PE P+ K+IY +RT ++ + +
Sbjct: 65 DTISARKIAQRMNGMELFPERPMSSWGNAATDADIPAYYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
ELK N R KI +G SR+ LC++ V E+ CR + +
Sbjct: 125 ELK---NTVYR-----PKICVLG--SREQLCIHPEVKRQESNHMQIYMCRMKVMA----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
C F+ N E+ ++ L + ++DL G + CPY+L+R + Q A+++
Sbjct: 170 -------RACHFYNNVEEKSTEKELIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+ DEAHN++ +C E+ S + L A L
Sbjct: 223 FMPYNYLLDSKSRRAHNLDL-KGTVVILDEAHNVEKLCEESSSFDLTPYDLASA---LDA 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
IN + E+ K + AE+N
Sbjct: 279 INVVLEEQAKVVQQNEINAEFN 300
>gi|15220007|ref|NP_178107.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
gi|12324592|gb|AAG52253.1|AC011717_21 putative helicase; 55525-51977 [Arabidopsis thaliana]
gi|332198199|gb|AEE36320.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
Length = 882
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 51/302 (16%)
Query: 445 VFDRFQSVVITSGTLSPID-LYPRLLNFHPVVSRSF---KMSLTRDCICPMVLTRGSDQL 500
V D +V++ GTL PI+ RL + P F + + I P+ ++ G
Sbjct: 553 VVDEAHAVILAGGTLQPIEETRERLFPWLPSNQLQFFSCSHIVPPESIMPIAVSHG---- 608
Query: 501 PVSTKFDM----RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
P FD RS G+ + G L+ +V++VP+GI+ FF S+ Y ++ W++SGIL
Sbjct: 609 PSGQSFDFSHSSRSSIGMIQELGLLMSNLVAVVPEGIIVFFSSFEYETQVHTAWSNSGIL 668
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
+ I++ K VF E + E L +Y++A + RGA+ +V GKV+EGI+F R V
Sbjct: 669 RRIVKKKRVFREPRKNTEVEAVLRDYKEAIESERGAIMLAVVGGKVSEGINFSDSMCRCV 728
Query: 617 IMFGVPFQYTLSKILLARLEYLR---DTFQIKEGDFLTFDA------------------- 654
+M G+P+ LL R++++ D+ IK L D+
Sbjct: 729 VMVGLPYPSPSDIELLERIKHIEGRADSDSIKPSVTLVDDSYYSGDVQAGFGVLKSCKRR 788
Query: 655 ---------LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR--------SKLPGWILS 697
++ Q +GR IR + DY ++ D RYS + +KLP WI
Sbjct: 789 GKEYYENLCMKAVNQSIGRAIRHEKDYASILLVDARYSNDPSKRTSHSHPSNKLPKWIKD 848
Query: 698 HL 699
L
Sbjct: 849 RL 850
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 22/184 (11%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ +C+RT ++ + + EL R A K+ + L SRKNLC+N VL N
Sbjct: 184 KVFFCSRTHSQLSQFVKEL--------RKTVFAKKLKVVCLGSRKNLCINEDVLKLGNVT 235
Query: 129 SVDAAC---RKRTASWVRALAAENPNIET--------CEFFENY--EKAASAAVLPPGVY 175
++ C +K+ S V N+ C + ++ A
Sbjct: 236 RINERCLDLQKKKISQVSKKKNLGANVRIVRTKASCRCPMLRKHKLQREFKAESFQQEAM 295
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
++DL G++ CPY+ +R M A++V+ YQ LL + + K SVV+ DE
Sbjct: 296 DIEDLVQLGREMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSL-KNSVVIIDE 354
Query: 236 AHNI 239
AHN+
Sbjct: 355 AHNL 358
>gi|320167785|gb|EFW44684.1| DEAH helicase isoform 6 [Capsaspora owczarzaki ATCC 30864]
Length = 1319
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 17/268 (6%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTLSP+ + + ++ +++ + V++ G +++ F R
Sbjct: 489 RSIILTSGTLSPLASFGAEMQLPFPITLENPHVISKSQLWCGVVSTGPSNCNLNSSFKTR 548
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-NDSG-----ILKEIMQHK 563
SD + G +V IVPDG++ FF SYS M + I W N SG + + QHK
Sbjct: 549 SDESYLTDLGSAIVNYARIVPDGLLVFFPSYSVMTQCINHWQNRSGTSAKNVWDMLHQHK 608
Query: 564 LVFIETQDVVETTLALDN-YRKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
IE ++ A++ Y K D RGAVFF+V RGKV+EG+DF GR VI+ G+
Sbjct: 609 HAVIEPREKNLFPSAINEFYAKVRDPTIRGAVFFAVCRGKVSEGLDFADMNGRAVIITGI 668
Query: 622 PFQYTLSKILLARLEYLRDTF--QIKEG-------DFLTFDALRQAAQCVGRVIRSKADY 672
P+ + + +YL + +K G ++ A R Q +GRVIR ++DY
Sbjct: 669 PYPALHDPRVKIKKQYLDENKAENLKSGIAAINGIEWYNQTAARAVNQAIGRVIRHRSDY 728
Query: 673 GMMIFADKRYSRHDKRSKLPGWILSHLR 700
G +I D R++ ++LP W+ +++
Sbjct: 729 GAIILCDSRFAAPGTIAQLPLWVRPYVK 756
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 30/185 (16%)
Query: 65 ENPV-KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA 123
++PV ++IY +RT ++ + + EL Q P A I+ SR+ +C++ V
Sbjct: 144 DSPVPRIIYSSRTHSQLAQAIKEL------QCTSYKPIASIIG----SREQMCIHPEVSQ 193
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
+ CRK + +C F+ N E+ + + V ++ L
Sbjct: 194 VHIQSVQVHNCRKLVG------------LHSCSFYNNLERNKMSRDISNQVLDIEGLVEV 241
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
CPY+L+R + ++ Y YLLDP + + S+++FDEAHN++++C
Sbjct: 242 ------CPYYLSRQLQNRGEIIFMPYNYLLDPTARKAANLNL-ANSIIIFDEAHNLESIC 294
Query: 244 IEALS 248
++ S
Sbjct: 295 EDSAS 299
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
F + V V FP+ N Y Q YM ++ + L + LLE PTGTGKT+ LL
Sbjct: 7 FTIRGVDVEFPF-NPYDCQLVYMEQVIQCLQEGTNALLESPTGTGKTLCLL 56
>gi|357617927|gb|EHJ71072.1| putative DEAD/H [Danaus plexippus]
Length = 756
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 23/271 (8%)
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR------------DCICPMV 492
V + +SV++ GT+ PI + LL S K L R D + +
Sbjct: 465 VVSQCRSVILAGGTMEPISEFQELL-------ASDKTQLDRVNVVKCGHVVPADNVLGIC 517
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
L++G +L ++ ++ RS + G++L + ++VPDG+VCF SYS+ +
Sbjct: 518 LSKGPSKLNLNFSYENRSSFELLNEIGRILRNLCNVVPDGVVCFLPSYSFEQTLYEHLKS 577
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG----RGAVFFSVARGKVAEGIDF 608
+G+L+ + + K++F E + E L Y A GA+ SV GK++EG++F
Sbjct: 578 TGVLESVSKKKIIFREPKSASEVEQVLQKYSAAVKSKVGDINGALMLSVVGGKLSEGLNF 637
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRS 668
GR V++ G+P+ S L +++YL + + ++ QC+GR +R
Sbjct: 638 SDELGRCVLVVGMPYPNIKSLELQEKMKYLNKSTPGSGSIYYENLCMKAVNQCIGRAVRH 697
Query: 669 KADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
DY +I D+RYSR S LP ++ L
Sbjct: 698 ANDYACVILVDERYSRSQTISALPSFVQKSL 728
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 94/227 (41%), Gaps = 37/227 (16%)
Query: 69 KLIYCTRTVHEMEKTLAELK-LLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ +RT ++ + + E+K + N T+ + L+SR++ C+NS V +N
Sbjct: 75 KIYISSRTHSQLSQFIGEIKRTIFNKGTK---------VVTLASRQHYCINSEVNRLKNV 125
Query: 128 DSVDAACRKRTASWVRALAAENPN----------IETCEFFENYEKAASAAVLPPGVYTL 177
++ C + S ++ A + C ++ L V +
Sbjct: 126 SLINERCLEMQKSKTKSTAKDEEGKVVKKSKTKACSACPYYNQNNIKKLKEKLLVEVMDM 185
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+++ GKQ CPY+ +R ++ A V + S+ ++ +S ++Q ++++ DEAH
Sbjct: 186 EEIVKSGKQMKACPYYASRMALEDAEVALISHAGIVSHGARTGVSIKLQN-NILIMDEAH 244
Query: 238 NIDNVCIEALSVSVRRQTLEG----------------ATRNLSRINQ 268
+ A S V + L ++RNL ++NQ
Sbjct: 245 GLSAALENAHSAPVSHKQLSCVKTFLEFYINKYRSLLSSRNLLQLNQ 291
>gi|145517083|ref|XP_001444430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411841|emb|CAK77033.1| unnamed protein product [Paramecium tetraurelia]
Length = 905
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 23/288 (7%)
Query: 422 RMPHIPDPVLQLS----CHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVS 476
++ I D QLS C + SLA +F + S+++TSGTLSP+ + L
Sbjct: 462 KLSFILDQSNQLSINMWCLEPSLAFSRLFSKSIYSILLTSGTLSPMPSWACELRI----- 516
Query: 477 RSFKMSLTRDCICPMVLT-RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
F++ L + I + R F+ R++ +G L+ + I+P+GI+
Sbjct: 517 -PFEVQLVNEHIIDLNKNLRVFQHKTFDFSFNQRNNEEQVSKFGVTLLSLSQIIPNGILV 575
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
F SYS M++ + W + +L + + K E Q E D Y++ +GA+ F
Sbjct: 576 IFSSYSLMNKFRSKWTYNKLLPRLCEIKACLWEPQQSAEMQNVFDLYKQKS--KKGAIMF 633
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF---------QIKE 646
+V RGKVAEGIDF R + + GVP+ LL ++ YL F +IK
Sbjct: 634 AVHRGKVAEGIDFSDELCRAIFLVGVPYPPKQDNHLLEKMGYLDKIFNDPEFTNQQRIKS 693
Query: 647 GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
++ T A+R Q +GRVIR DYG++ DKR+ D + L W
Sbjct: 694 SEWYTQQAIRATNQAMGRVIRHINDYGIVYLCDKRFEYRDIKQGLSKW 741
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 37/276 (13%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS-- 62
L++ VYFP+ Y Q SYM + RAL+ K + LLE PTGTGKT++LL +++
Sbjct: 52 LDNTPVYFPHQ-PYDVQKSYMESVIRALNKKQNALLESPTGTGKTLSLLCASLAWLKKNR 110
Query: 63 -------KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
+P+N +K+IY +RT ++++ ELK K L SR
Sbjct: 111 KDQLNSDQPKN-IKIIYSSRTHAQLKQVAMELK----------KTVYKPNVSMLGSRDQY 159
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVY 175
C+ A + ++ +CRK S C+F++ A +
Sbjct: 160 CIRGDFSAIKGT-LLNQSCRKSVKS------------NQCQFYKKEHLILMAQNYSTLIS 206
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
+L + + FG + CPY+ R + FA++++ Y YLL+ ++ E S+++FDE
Sbjct: 207 SLDEAKQFGFKNKLCPYYFERQRLDFADLILLPYNYLLEKDFQDVVEIE---NSILIFDE 263
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE 271
AHN+ + E S + + A ++L + E+E
Sbjct: 264 AHNVQSTAEEGSSFLITHNNIIEAEKDLEKWIDELE 299
>gi|71029556|ref|XP_764421.1| DNA repair helicase [Theileria parva strain Muguga]
gi|68351375|gb|EAN32138.1| DNA repair helicase, putative [Theileria parva]
Length = 962
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 419 FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQ-----SVVITSGTLSPIDLYPRLLNFHP 473
+ E +P I V C L P F R + S+++TSGTL P+++ R L
Sbjct: 521 YREDIPEIIPKVFTFKC----LQPVPTFVRLKNGGVRSIILTSGTLGPLEVLERHLGGGH 576
Query: 474 VVSRSFKMSLTRD-CICPMVLTRGS------DQLPVSTKFDMRSDPGVARNYGKLLVEMV 526
V F + L + I P + G+ D +S+ F+ R+ G ++ V
Sbjct: 577 V---KFDVKLQNEHVIDPSRVWVGAISGNAEDPNMLSSTFNTRNKMNYITELGNAVLSFV 633
Query: 527 SIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV----------VETT 576
VP G++ FF SYS M+ + W GI +I K +++E + V V T
Sbjct: 634 KNVPGGVLVFFGSYSVMNYTASVWKKIGIYSKIEMFKRIYLEARPVENPDDKDAIPVTTM 693
Query: 577 LALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE 636
+ Y++ D G G+VFF++ RG++AEGIDF Y R + + G+P+ +++
Sbjct: 694 EIFEKYKQNIDQGNGSVFFAICRGRLAEGIDFSDDYCRGIFVCGIPYPSRFDDNTALKMD 753
Query: 637 YL----RDTFQIKE--GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK 690
YL T++ ++ T A+R Q VGR IR DYG ++ AD R+ +
Sbjct: 754 YLDKLSNKTYEKSNLANEWYTSQAIRAINQAVGRSIRHDRDYGAILLADYRFKHIPVKPN 813
Query: 691 LPGWILSHLR 700
L W+L+ L+
Sbjct: 814 LSKWVLNRLK 823
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
KPE +K++Y +RT ++++ + E+ Y+ P + + L+SR LC+N
Sbjct: 131 KPER-IKIMYSSRTHSQLKQVIGEVWKSDYYE--EFNPKG-LKGVLLASRDLLCINP--- 183
Query: 123 AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLP-PGVYTLQDLR 181
S + A++ + + E CE+F +A + ++++
Sbjct: 184 ------SRGKMTGEVLANFCKQVIQE----RKCEYFNTMRGDKNAKQFQFERLMDIEEMV 233
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
GK +CPYF + + A++V+ Y Y+L P + + +++ +++ EAHN +
Sbjct: 234 QTGKDGHFCPYFSVKEGQEHADLVLLPYNYILSPDIRDAMDIDIKDSIIIID-EAHNAEQ 292
Query: 242 VCIEALSVSVRRQTL 256
V E S +++ +
Sbjct: 293 VAEEGASFGIKQTDI 307
>gi|38707228|gb|AAR27232.1| DEAH helicase isoform 6 [Mus spretus]
Length = 1128
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 149/285 (52%), Gaps = 17/285 (5%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYP--RLLNFHPVVSRSFKMSLTRD 486
VL C S +++ V +++++TSGTL+P+ + + + F PV + + + ++
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPF-PVCLENPHI-IDKN 509
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++
Sbjct: 510 QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKS 569
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAE 604
+ W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +E
Sbjct: 570 LEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASE 629
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDAL 655
G+DF GR VI+ G+P+ + ++ ++++L D + + G ++ A
Sbjct: 630 GLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQAS 688
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 689 RAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 142/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT + + +
Sbjct: 65 DAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|81872267|sp|Q6H1L8.1|RTEL1_MUSSP RecName: Full=Regulator of telomere elongation helicase 1
gi|38707220|gb|AAR27228.1| DEAH helicase isoform 2 [Mus spretus]
Length = 1203
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 149/285 (52%), Gaps = 17/285 (5%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYP--RLLNFHPVVSRSFKMSLTRD 486
VL C S +++ V +++++TSGTL+P+ + + + F PV + + + ++
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPF-PVCLENPHI-IDKN 509
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++
Sbjct: 510 QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKS 569
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAE 604
+ W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +E
Sbjct: 570 LEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASE 629
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDAL 655
G+DF GR VI+ G+P+ + ++ ++++L D + + G ++ A
Sbjct: 630 GLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQAS 688
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 689 RAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 142/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT + + +
Sbjct: 65 DAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|46452191|gb|AAS98192.1| DEAH helicase isoform 1 [Mus spretus]
Length = 1209
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 149/285 (52%), Gaps = 17/285 (5%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYP--RLLNFHPVVSRSFKMSLTRD 486
VL C S +++ V +++++TSGTL+P+ + + + F PV + + + ++
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPF-PVCLENPHI-IDKN 509
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++
Sbjct: 510 QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKS 569
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAE 604
+ W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +E
Sbjct: 570 LEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASE 629
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDAL 655
G+DF GR VI+ G+P+ + ++ ++++L D + + G ++ A
Sbjct: 630 GLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQAS 688
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 689 RAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 142/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT + + +
Sbjct: 65 DAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|449482368|ref|XP_002193292.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Taeniopygia guttata]
Length = 913
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 18/269 (6%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL---NFHP--VVSRSFKMSLTRDCICPMVLTRGSD 498
V + ++V+I GT+ P+ D +LL P +V S + + I P++L G
Sbjct: 597 VVEECRAVIIAGGTMQPVADFREQLLCRAGVDPARIVEFSCGHVIPPENILPIILCSGPS 656
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + +++P G+VCFF SY Y ++ W +G+L
Sbjct: 657 NQQLEFTYQTRDLPQMMDETGRILSNLCNVIPGGVVCFFPSYEYEKQVYGHWEKTGLLSR 716
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACDCGR-------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K C GA+ SV GK++EGI+F
Sbjct: 717 LASKKKIFQEPKKANQVEQVLVEYAKCIKCCSQTGGQMTGALLLSVVGGKMSEGINFSDD 776
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD-----FLTFDALRQAAQCVGRVI 666
GR VIM G+P+ S L ++ +L T G + ++ Q +GR I
Sbjct: 777 LGRCVIMVGMPYPNIRSPELQEKMTWLDKTMPRAAGQAPSRVLIENLCMKAVNQSIGRAI 836
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R + D+ ++ D RY+R +KLP WI
Sbjct: 837 RHQKDFASILLLDHRYTRPAIFNKLPQWI 865
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 50/208 (24%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV--LAA- 124
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V L A
Sbjct: 210 TKIYYCSRTHSQLSQ------FVHEVQKSPFGKNIRLVSLG--SRQNLCVNEEVRRLGAL 261
Query: 125 ---------------ENRDSVDAACRKRTASWVRALAAENPNIETCEF--FENYEKAASA 167
E + S + +KR S RA+ C F FE +
Sbjct: 262 QLINDRCMEMQKNKHEKKSSEENEGKKRRVS--RAM---------CPFYSFEQMQFLRDE 310
Query: 168 AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLL-DP--KVAGIISKE 224
++ V ++ L + G++ CPY+ +R + A +VV YQ LL +P AGI
Sbjct: 311 VLVE--VKDIEQLVSLGRETKACPYYGSRFAIPAAQLVVLPYQMLLHEPTRNAAGI---- 364
Query: 225 MQKESVVVFDEAHN-IDNV-CIEALSVS 250
K+ VV+ DEAHN ID + CI + VS
Sbjct: 365 KLKDQVVIIDEAHNLIDTITCIHSAEVS 392
>gi|38707222|gb|AAR27229.1| DEAH helicase isoform 3 [Mus spretus]
Length = 1164
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 149/285 (52%), Gaps = 17/285 (5%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYP--RLLNFHPVVSRSFKMSLTRD 486
VL C S +++ V +++++TSGTL+P+ + + + F PV + + + ++
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPF-PVCLENPHI-IDKN 509
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++
Sbjct: 510 QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKS 569
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAE 604
+ W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +E
Sbjct: 570 LEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASE 629
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDAL 655
G+DF GR VI+ G+P+ + ++ ++++L D + + G ++ A
Sbjct: 630 GLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQAS 688
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 689 RAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 142/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT + + +
Sbjct: 65 DAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|38707226|gb|AAR27231.1| DEAH helicase isoform 5 [Mus spretus]
Length = 1170
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 149/285 (52%), Gaps = 17/285 (5%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYP--RLLNFHPVVSRSFKMSLTRD 486
VL C S +++ V +++++TSGTL+P+ + + + F PV + + + ++
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPF-PVCLENPHI-IDKN 509
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++
Sbjct: 510 QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKS 569
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAE 604
+ W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +E
Sbjct: 570 LEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASE 629
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDAL 655
G+DF GR VI+ G+P+ + ++ ++++L D + + G ++ A
Sbjct: 630 GLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQAS 688
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 689 RAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 142/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT + + +
Sbjct: 65 DAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|392350937|ref|XP_237570.6| PREDICTED: probable ATP-dependent RNA helicase DDX11, partial
[Rattus norvegicus]
Length = 954
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-VSRSFKMS----LTRDCICPMVLTRGSD 498
V +++VI GT+ P+ D +LL V SR + S + D I P+++ G
Sbjct: 448 VVKECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHVIPPDNILPLIICSGPS 507
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCF SY Y+ ++ A W+ +G+L
Sbjct: 508 NQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEYLRQVHAHWDKTGLLAR 567
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKA-CDCGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y C GA+ SV GK++EGI+F
Sbjct: 568 LSVRKKIFQEPKRASQVEQVLTAYSTCIASCSHSEGHLTGALLLSVVGGKMSEGINFSDD 627
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T Q G L + ++ Q +GR
Sbjct: 628 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTIPRTHGQPPPGTVLIENLCMKAINQSIGRA 687
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D RY+R +KLP WI RD + + A R+F R+ +
Sbjct: 688 IRHQKDFASIVLLDHRYARPSILAKLPAWI----RDRVEVKATFGPAFAAMRKFHREKSH 743
Query: 725 P 725
P
Sbjct: 744 P 744
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + + E+ Q G +++++G SR++LCVN V + +
Sbjct: 66 TKIYYCSRTHSQLAQFVREV------QKSPFGKETRLVSLG--SRQSLCVNEDVKSLGSV 117
Query: 128 DSVDAAC---RKRTASWVRALAAENPNIE------TCEFFENYEKAASAAVLPPGVYTLQ 178
++ C ++R +R + + P +C F+ + + + V ++
Sbjct: 118 HLMNDRCVDMQRRKHEKMR-IGEDKPKRRRQKMQASCPFYNHEQMELLRDEILLEVKDME 176
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
L A GK+ CPY+ +R + A +VV Y LL +Q + VV+ DEAHN
Sbjct: 177 QLVALGKEAQACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQ-VVIIDEAHN 235
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ + S V L A S++ Q +ER++ RL+A+
Sbjct: 236 LIDTITNIHSTEVNGSQLCQAH---SQLLQYMERYRK----RLKAK 274
>gi|300706292|ref|XP_002995425.1| hypothetical protein NCER_101677 [Nosema ceranae BRL01]
gi|239604524|gb|EEQ81754.1| hypothetical protein NCER_101677 [Nosema ceranae BRL01]
Length = 600
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 152/732 (20%), Positives = 294/732 (40%), Gaps = 168/732 (22%)
Query: 16 NIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPV------- 68
++Y Q ++ + K+ +D + PTGTGKT++LL + Y+ E+ V
Sbjct: 5 DLYDIQKKFITDCKKVIDNSSVGIFSSPTGTGKTLSLLLSVLEYITELEEDDVLLENLVE 64
Query: 69 -----KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLA 123
K+ +C+RT ++++ L E K L K ++ L SRK C+N +
Sbjct: 65 NFSRTKIYFCSRTHSQLKQCLHEFKNLE----------VKTNSVILGSRKIYCINREIDN 114
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
E+ + V+ C+ + C++++ + G+Y ++ L
Sbjct: 115 KEDINKVNQKCKDLIKQ------------DNCKYYK-------QDMFVSGIYDIEQLVKE 155
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G++ CPYF ++ + +V Y L + + I+ + V+V DEAHNI +
Sbjct: 156 GRKHKACPYFFSKKYFKKCELVFLPYNLLFNEENRKNININLINSIVIV-DEAHNIIDTV 214
Query: 244 IEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWL 303
++++ + +E + +N+ + L L
Sbjct: 215 NNFNTITIHYEIME----------------------KYFVAFNKYKKLLNLNS------- 245
Query: 304 SNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHA 363
+I+ + L +L++LV+Y + +S + + A
Sbjct: 246 ---------------KSIKIVVNMLDILQKLVKY------------KNSISKIMEVNA-- 276
Query: 364 GIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTIC--------DFATLVGTYTRGFSII 415
F Y+ S +L + D +E L IC + + + S++
Sbjct: 277 --------FLYD---SNLLKYNMLDIEENLKQYNICAKIEAYGKNLQNKIFDIIKFLSLL 325
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+ + D L++ DA L +P FD QS+V GT+ PI + N V
Sbjct: 326 VNSDKNCKIEVADKYLKIFPIDAKLYFEPFFDC-QSIVFAGGTMEPIQPLQDIFNAKNVE 384
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPD---- 531
S+ S+ ++ ++ + ++ K R+ K+ +E++ I+
Sbjct: 385 YFSYD-SIIKNFRGFIICEFDHKRFELTEK---------TRDVEKIQMEIILIIKKIACT 434
Query: 532 ----GIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD 587
G+V F S Y++ + DS + F E D+ E +Y KA
Sbjct: 435 VKKGGVVVFLPSKYYLEFLRKLLKDS---------ENYFFENFDIFE------DYAKATK 479
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
+ V F+V GK++EG++F+ R++++FGVPF +S + +++Y + F ++
Sbjct: 480 TNK-CVLFAVMGGKLSEGVNFNDDLCRVLVIFGVPFP-NISVEIAEKIKYFGENFYLQM- 536
Query: 648 DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLS 707
A+++ Q +GR +R DY + D RY+++ K L W ++D +N
Sbjct: 537 ------AMKKVNQTIGRALRHVNDYASIFLIDARYNKYKK--DLSLWFRQKVKD--INFE 586
Query: 708 TDMALHIAREFL 719
T AL+ +FL
Sbjct: 587 T--ALNETGKFL 596
>gi|38707224|gb|AAR27230.1| DEAH helicase isoform 4 [Mus spretus]
Length = 1165
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 149/285 (52%), Gaps = 17/285 (5%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYP--RLLNFHPVVSRSFKMSLTRD 486
VL C S +++ V +++++TSGTL+P+ + + + F PV + + + ++
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPF-PVCLENPHI-IDKN 509
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ ++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++
Sbjct: 510 QLWVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKS 569
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAE 604
+ W G+ +++ K +F+E ++ + +D Y + A GA F +V RGK +E
Sbjct: 570 LEFWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASE 629
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDAL 655
G+DF GR VI+ G+P+ + ++ ++++L D + + G ++ A
Sbjct: 630 GLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQAS 688
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 689 RAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 142/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT + + +
Sbjct: 65 DAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|375082618|ref|ZP_09729671.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus litoralis
DSM 5473]
gi|374742696|gb|EHR79081.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus litoralis
DSM 5473]
Length = 643
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 158/713 (22%), Positives = 291/713 (40%), Gaps = 113/713 (15%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
YFPY+++ P Q ++ + A+ + ++E PTG GKT+++L+ Y + K+
Sbjct: 4 YFPYNSLRPNQEEFIKLVDNAVRNGENLVIEAPTGFGKTVSVLAGALPYA---KDMGYKI 60
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
IY RT +M++ + ELK + + + SRK LC++ + +
Sbjct: 61 IYLARTHKQMDRVIEELKAISK--------KTHVSGVEFRSRKELCLHQYI----QNFAP 108
Query: 131 DAACRKRTASWVRALAAENPNIETCEFFENYEKAA-----------SAAVLPPGVYTLQD 179
DA ++ L CEFFEN +K P V T
Sbjct: 109 DAYNAMIVCKNLKKLG-------KCEFFENLKKKKEEFDELVQYFIQTPAEPITVLT--- 158
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEA 236
+ K +CPY L R + ++V+V SY Y+++P + + +V+FDEA
Sbjct: 159 ---YSKMFDFCPYELTRKVALNSDVIVASYLYMINPAIRENFMSYFDFDYSDLIVIFDEA 215
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRG 296
HN+ + I ALS V + +++R +E + +K + + + + +E L +
Sbjct: 216 HNLPDQAINALSDKV-------SIHSINRAIKEADEYKEHETANFLSIFLKGLENL-YQE 267
Query: 297 NLPNAWLSN-PALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSF 355
L + + P LP I + +L ++V+ E + P S+
Sbjct: 268 KLKDMKVEEVPILPESIFYHVFDVLGINERQLIRILDQMVKAGDAIREDKIERNLPPRSY 327
Query: 356 VASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSII 415
V + L+L + +++L + + +GFS
Sbjct: 328 VGRVGEF-----------------LLLWFALIGKEDYLFLM----------SRDKGFS-- 358
Query: 416 IEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
L+L D S A+ + QS + SGTL+P++ + ++ +
Sbjct: 359 ---------------LELVALDPSKALSFI-KNVQSAIFMSGTLTPLEAFADIMGVEGRL 402
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
+ +M + + +++ R VST+ D RS + + + +VE +P +
Sbjct: 403 KKFPRMVKRENAL--VLVARD-----VSTRGDERS-LELYKKLARYVVEAAKFIPKNVGV 454
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACDCGRGAV 593
F SY ++ +++ D I +E K VFIE + E L + +++ GAV
Sbjct: 455 FTASYEVLEGLLSANVDVRIREET--GKKVFIEKKGASSKENDLLVMAFKEEAKKD-GAV 511
Query: 594 FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF- 652
V G+ +EG D+ V++ G+P+ ++ A++ Y + F K G + +
Sbjct: 512 LLGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPTPRV-QAQIRYFENKFPGK-GRYYGYI 569
Query: 653 -DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
A R+ Q GRV RS+ + G +I D R + LP W+ L+ L
Sbjct: 570 LPAHRKLVQAAGRVHRSEEEKGAIIVLDYRLLWKSVQRDLPDWMRETLKPVTL 622
>gi|52548288|gb|AAU82137.1| conserved hypothetical protein [uncultured archaeon GZfos10C7]
Length = 644
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 156/728 (21%), Positives = 304/728 (41%), Gaps = 105/728 (14%)
Query: 6 EDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE 65
ED +FP+ +I Q +M ++K+A++ PTG GKT+A+L Y + +
Sbjct: 3 EDKPFFFPFPSIREGQREFMEDVKQAVEGGNILAAHAPTGIGKTVAVLVPALQYAIQN-D 61
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAE 125
V + R+ H++ + L+L+ + + + + S++++C
Sbjct: 62 KTVFFLTSKRSQHKI--AIDTLRLIKERAKLNF------VVVDIISKQSMC--------- 104
Query: 126 NRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGK 185
R + R+ + + +E N C +F N ++ A + + +++L +
Sbjct: 105 PRAKAGSIYREFYSLFSEFCRSEQKN-RRCRYFVNRDEEAQQRIRDK-IMHVEELYEWCS 162
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK---ESVVVFDEAHNIDNV 242
+G CPY A + + A+V+V Y YL +A + +++ K + +V+ DEAHN+ +
Sbjct: 163 FRGVCPYKAALEVGESADVLVCDYNYLFSSDIAETVLEKIGKGLEDVIVIVDEAHNLPDR 222
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAW 302
LS +R T+ A L R N+EI Y+ L+E + L A
Sbjct: 223 IRNNLSSELRMSTITEAAHGLRRTNREI--------------YDNLMELETIFAKLAMAA 268
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
N ++ ++ + + + VLRR + + + V+ + +I
Sbjct: 269 RKNKKEEMNVDRDFLVDGMEK------VLRRKIVAM---------SYDDFVNSLRNIAER 313
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDER 422
+G + Y+ L I D + C R FS+
Sbjct: 314 SGTSETDENTKYKDEALQRNVLNIADFLDEWRTNEKC---------LRIFSV-------- 356
Query: 423 MPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF-------HPVV 475
H +P L D S+ +P F S ++ SGTL P ++Y +L +V
Sbjct: 357 SQHNENPSLHFKLLDPSIVSEPAFAGAHSTIMMSGTLCPAEMYAEILGASSDRIKGKEIV 416
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVC 535
R +K + +V+TRG ++TK+ R + ++ GK + E+ V G+
Sbjct: 417 LREYKSPFPEENRL-IVVTRG-----LTTKYTKRGEEMYSKIAGK-IAEVAEYVQGGMAV 469
Query: 536 FFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFF 595
FF SY+ +I + K I++ + + E ++ + L D+ G +
Sbjct: 470 FFPSYALQRDIAVYLPEEVRRKAIVERREMRKEEKNRLYELLREDS---------GGILL 520
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLE-YLRDTFQIKEGDFLT--F 652
+V G +EG+DF+ + + +I+ G+P + + + +E Y + ++G +
Sbjct: 521 AVQGGSFSEGMDFESNMLKAIIVVGLPL--SPPTLEVKTIEGYYAGKYGAEKGKLYGYYY 578
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAL 712
A+ + Q GR IRS+ D +++ D R++++ ++ LP D ++ L TD A
Sbjct: 579 PAITKVLQAAGRGIRSEHDRCIIVLMDYRFAKYPYKNCLPS-------DYNVKL-TDRAE 630
Query: 713 HIAREFLR 720
A+ F +
Sbjct: 631 EFAKSFFK 638
>gi|254571493|ref|XP_002492856.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|238032654|emb|CAY70677.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|328353133|emb|CCA39531.1| chromosome transmission fidelity protein 1 [Komagataella pastoris
CBS 7435]
Length = 811
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 145/314 (46%), Gaps = 28/314 (8%)
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC 487
D L+ D S + + D + V++ GT+ P++ Y L F KM + D
Sbjct: 497 DISLKFLLLDPSEIFQDIVDESRCVILAGGTMEPMEDYVNFL-FKHTPRNKIKM-FSCDH 554
Query: 488 ICP------MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYS 541
I P L+ G + ++ F R P + ++ G ++++V VP G V FF SY
Sbjct: 555 IIPKNNLKVFALSNGMEGNLLNFSFSNRESPAIIKDLGTSILKIVQCVPGGTVIFFPSYK 614
Query: 542 YMDEIIATWNDSGIL--KEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSV 597
Y+++++ W + L + + K +F E D + L +Y + + RGA+ FSV
Sbjct: 615 YLEKVVEHWKLTSPLMWSTLNRLKDIFTEPTDSGKVEDVLSDYSRKISENPKRGAILFSV 674
Query: 598 ARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE----------- 646
GK++EGI+F R +IM G+PF S L+AR +++ D+ +KE
Sbjct: 675 VGGKMSEGINFQDDLARGIIMVGLPFPNAFSGELIARRKFIEDSV-LKETNSRKASLQAS 733
Query: 647 GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNL 706
DF +R Q VGR IR DY ++ D RY+ + + KL GWI R +
Sbjct: 734 KDFYENICMRSVNQSVGRAIRHINDYAVIFLLDNRYNNTNIQQKLSGWI----RKRFASF 789
Query: 707 STDMALHIAREFLR 720
+ A+ +F R
Sbjct: 790 TMSKAISETEDFFR 803
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA---KILAIGLSSRKNLCVNSRVLAA 124
++++ +RT ++ + ++L+L + LG K L IG SRK LC+N +V
Sbjct: 186 TRILFSSRTHSQLNQFTSQLRLTSFPSS--LGAVEEHIKYLPIG--SRKQLCINPKVNHY 241
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFG 184
++ ++ AC + + N +T + + + + + + ++DL G
Sbjct: 242 QSLPLLNEACLEAQKDSNCKYYDQPNNPQTMQRMQEFRDYTYSEI-----HDIEDLNGIG 296
Query: 185 KQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCI 244
+ CPY+ R + + ++ YQ LL+ I++ ++ + S+V+ DEAHN+ + +
Sbjct: 297 ESLDICPYYSIRKSIPLSEIISLPYQMLLERNTRQILNIDL-RNSIVIVDEAHNLMDTIM 355
Query: 245 EALSVSVRRQTL 256
S S+ + L
Sbjct: 356 ALNSTSLSYKEL 367
>gi|223996978|ref|XP_002288162.1| DNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975270|gb|EED93598.1| DNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 839
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 168/706 (23%), Positives = 284/706 (40%), Gaps = 122/706 (17%)
Query: 62 SKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
S+ +N + RT ++ + + EL+ H G K++A+G SR LC N V
Sbjct: 184 SEDDNVALIALGPRTHSQLSQFIGELR------RTHWGETVKVVALG--SRSLLCGNEDV 235
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIE----------------TCEFFENYEKAA 165
L A + ++ +R S + + + I+ +C + + E +
Sbjct: 236 LYASKTNKKNS---RRNESEITEMCLDMQKIKRDGKKKSDDGKGKKVSSCPYLASPEAVS 292
Query: 166 SAA----VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGII 221
+ A V P + +D GK C Y+ +R + A VVV Y LL P+ +
Sbjct: 293 TLAMHALVRPSDI---EDTANLGKASRVCSYYASRKALAAAEVVVLPYNTLLSPQARQSV 349
Query: 222 SKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGR- 280
+ K +++V DEAHN+ S + +E A +S++ R+ AGR
Sbjct: 350 GLSI-KNALIVVDEAHNLPEALRNISSCQLSLPVMEAA---MSQLLAYTRRYSGRLAGRN 405
Query: 281 ---LRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQY 337
L L+ + P A + SD+ K+ +IR E V
Sbjct: 406 LFYLGQIRKVLLAMIKYLKRPPPA----SSHGSDVTKDE---SIRTKEMMAAV------D 452
Query: 338 LRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHS----LMLTLEITDTDEFL 393
L RL+ +NV + ++ + + QK L F + S T D EF+
Sbjct: 453 LMFRLKLDNVNLFALLRYL----EKSRLSQKLLGFVNHTVASSEENANNTANNNDQSEFM 508
Query: 394 --HIQTICDFATL---VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDR 448
H+ ++ T + T +R II+E L+ ++S KP R
Sbjct: 509 SKHVSSLSIVETFFQRLTTTSREGKIIVE-----------WSLESDDEESSFTTKPPTFR 557
Query: 449 F--------QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS---------------LTR 485
F +VV+ GTL P + L + VV + S T
Sbjct: 558 FLDNIVEEAHAVVLAGGTLRP---FSHLAREYDVVHNTSGSSSASPPSSLVQITQQLTTF 614
Query: 486 DC--------ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
C + L+ G + + + RS + G++L+ M ++VP G V F
Sbjct: 615 TCGHVIPPSNVVTACLSFGPTSHKLDFRHNSRSSNAMIDELGRVLLNMCNVVPSGFVVFL 674
Query: 538 VSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR-KACDCGRGAVFFS 596
SY+Y ++ W +G+L +I + K + E ++ + AL Y +A GA+ FS
Sbjct: 675 PSYNYESQVFQRWRSTGMLAQIDKKKRIHREPKNSRDLETALARYSTEASSSKAGALLFS 734
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDA-- 654
V GK++EGI+F R V++ G+P+ +L +++ L ++ K G +T +
Sbjct: 735 VMGGKMSEGINFANDMARCVLVVGLPYPDITDPVLKEKMQCLDREYR-KSGTGITGQSYY 793
Query: 655 ----LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK-LPGWI 695
+R Q VGR IR DY ++ AD RY+ + K LP W+
Sbjct: 794 QNLCMRTVNQSVGRAIRHANDYAAIVLADYRYASEPRIWKGLPQWL 839
>gi|326912321|ref|XP_003202502.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Meleagris gallopavo]
Length = 896
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-VSRSFKMS----LTRDCICPMVLTRGSD 498
V ++V+I GT+ P+ D +LL+ V +R + S + + I P+VL G
Sbjct: 602 VVKECRAVIIAGGTMQPVADFREQLLSCAGVDPARIMEFSCGHVIPPENILPIVLCSGPS 661
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W +G+L
Sbjct: 662 NQQLEFTYQTRDLPQMMDETGRILCNLCNVVPGGVVCFFPSYDYEKQVYAHWEKTGLLTR 721
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K C + GA+ SV GK++EGI+F
Sbjct: 722 LATKKKIFQEPKKANQVEQVLVEYAKCIKRCSQAGGQMTGALLLSVVGGKMSEGINFSDD 781
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFDALRQAAQCVGRVI 666
GR VIM G+P+ S L ++ +L T Q + ++ Q +GR I
Sbjct: 782 LGRCVIMVGMPYPNIKSPELQEKMTWLDKTMPRAASQAPSKVLIENLCMKAVNQSIGRAI 841
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R + D+ ++ D RYSR +KLP WI
Sbjct: 842 RHQKDFASILLLDHRYSRPAILNKLPQWI 870
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 50/208 (24%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRV--LAA- 124
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V L A
Sbjct: 216 TKIYYCSRTHSQLSQ------FVHEVQKSPFGKDTRLVSLG--SRQNLCVNEEVRRLGAL 267
Query: 125 ---------------ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA--SA 167
E + + +KR S C F+ +YE+
Sbjct: 268 QLINDRCTEMQKNKHEKKSDAEVEGKKRRVSRT-----------VCPFY-SYEQMQFLRD 315
Query: 168 AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP---KVAGIISKE 224
VL V ++ L GK+ CPY+ +R+ + A +VV YQ LL AGII
Sbjct: 316 EVLVE-VKDIEQLVTLGKETKACPYYGSRYAIAAAQLVVLPYQMLLHEATRNAAGIIL-- 372
Query: 225 MQKESVVVFDEAHN-IDNV-CIEALSVS 250
K+ VV+ DEAHN ID + CI + VS
Sbjct: 373 --KDQVVIIDEAHNLIDTITCIHSAEVS 398
>gi|293350107|ref|XP_001070646.2| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Rattus
norvegicus]
Length = 845
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 24/301 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-VSRSFKMS----LTRDCICPMVLTRGSD 498
V +++VI GT+ P+ D +LL V SR + S + D I P+++ G
Sbjct: 546 VVKECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHVIPPDNILPLIICSGPS 605
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCF SY Y+ ++ A W+ +G+L
Sbjct: 606 NQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEYLRQVHAHWDKTGLLAR 665
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKA-CDCGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y C GA+ SV GK++EGI+F
Sbjct: 666 LSVRKKIFQEPKRASQVEQVLTAYSTCIASCSHSEGHLTGALLLSVVGGKMSEGINFSDD 725
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T Q G L + ++ Q +GR
Sbjct: 726 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTIPRTHGQPPPGTVLIENLCMKAINQSIGRA 785
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD-AHLNLSTDMALHIAREFLRKMAQ 724
IR + D+ ++ D RY+R +KLP WI RD + + A R+F R+ +
Sbjct: 786 IRHQKDFASIVLLDHRYARPSILAKLPAWI----RDRVEVKATFGPAFAAMRKFHREKSH 841
Query: 725 P 725
P
Sbjct: 842 P 842
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
+ YC+RT ++ + + E+ Q G +++++G SR++LCVN V + +
Sbjct: 160 IYYCSRTHSQLAQFVREV------QKSPFGKETRLVSLG--SRQSLCVNEDVKSLGSVHL 211
Query: 130 VDAAC---RKRTASWVRALAAENPNIE------TCEFFENYEKAASAAVLPPGVYTLQDL 180
++ C ++R +R + + P +C F+ + + + V ++ L
Sbjct: 212 MNDRCVDMQRRKHKKMR-IGEDKPKRRRQKMQASCPFYNHEQMELLRDEILLEVKDMEQL 270
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
A GK+ CPY+ +R + A +VV Y LL +Q + VV+ DEAHN+
Sbjct: 271 VALGKEAQACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQ-VVIIDEAHNLI 329
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ S V L A S++ Q +ER++ RL+A+
Sbjct: 330 DTITNIHSTEVNGSQLCQAH---SQLLQYMERYRK----RLKAK 366
>gi|291224421|ref|XP_002732204.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like
[Saccoglossus kowalevskii]
Length = 853
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 25/281 (8%)
Query: 443 KPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS-------LTRDCICPMVLTR 495
K + + +SV++ GT+ PI + L F V+ K+S + D + P+ L
Sbjct: 553 KEIVTKCKSVIVAGGTMQPISEFKEQLFFATGVTPE-KISEFACGHVIPDDHLLPIALCT 611
Query: 496 GSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI 555
G + + + R + G+++ + S+VP G+VCFF SY Y ++ A W+ +G+
Sbjct: 612 GPVGVELDFTYQSRDKKEMLDELGRVMCNVCSVVPGGVVCFFPSYEYEYKVHAHWDKTGV 671
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYR---KACDCGR------GAVFFSVARGKVAEGI 606
L + K V E + + L Y + CD GA+ SV GK++EGI
Sbjct: 672 LTRLGAKKKVLREPRKANLSENVLAEYTSCIQQCDKTSNESGITGALLLSVVGGKMSEGI 731
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF-----LTFDAL--RQAA 659
+F GR ++M G+P+ S L +++YL T GD + ++ L +
Sbjct: 732 NFSDGLGRCIVMVGLPYPNIKSPELKEKMDYLNSTMG-PSGDGKLPGQIHYENLCMKAVN 790
Query: 660 QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GR IR K DY ++ D RY++ R+KLPGWI S L+
Sbjct: 791 QSIGRAIRHKDDYATILLLDHRYAKSHIRTKLPGWIASELQ 831
>gi|410953370|ref|XP_003983344.1| PREDICTED: regulator of telomere elongation helicase 1 [Felis
catus]
Length = 1477
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++++TSGTL+P+ + L V + + I ++ +G D +S+ FD R
Sbjct: 471 RTLILTSGTLAPVSSFALELQIPFPVCLENPHVIDKHQIWVGIVPKGPDGAQLSSAFDKR 530
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W +++ K +F+E
Sbjct: 531 FSDACLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRARDFARKLESLKPLFVEP 590
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + +D Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 591 RSKGGFSEVVDAYYTRVASPGSSGATFLAVCRGKASEGLDFADTNGRGVIVTGLPYPPRM 650
Query: 628 SKILLARLEYLRDTFQIKEG---------DFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G ++ A R Q +GRVIR + DYG +
Sbjct: 651 DPRVVLKMQFL-DELKGRSGPGGQLLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLC 709
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H++
Sbjct: 710 DHRFTHADARAQLPSWVRPHVK 731
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 64/304 (21%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLS---------- 54
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 55 ---------------LITSYVLSKP------------ENPVKLIYCTRTVHEMEKTLAEL 87
L + LS + K+IY +RT ++ + ++EL
Sbjct: 65 DTISARKIAERAQGVLFVDHTLSWGAAASDGDSTACYSDVPKIIYASRTHSQLTQVISEL 124
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
+ +Y+ R L SR+ LC++ V E+ CRK+ AS
Sbjct: 125 RST-SYRPR---------VCVLGSREQLCIHPEVKKQESNHMQIHLCRKKVAS------- 167
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 168 -----RSCHFYNNVEEKSLEQELTTSILDIEDLVKSGNKHKLCPYYLSRNLKQQADIIFM 222
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L I+
Sbjct: 223 PYNYLLDAKSRRAHSIDL-KGTVVIFDEAHNVEKMCEESASFDL---TPHDVASGLDAID 278
Query: 268 QEIE 271
Q +E
Sbjct: 279 QVLE 282
>gi|403282703|ref|XP_003932780.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Saimiri boliviensis boliviensis]
Length = 1604
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RALILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + ++I K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPCGLLVFFPSYPVMEKSLEFWRARDLARKIEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ V + + Y R GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKVSFSETISAYYERITSPGSTGAAFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 136/304 (44%), Gaps = 63/304 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L VTV FP++ Y Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LNGVTVDFPFEP-YKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 60 ---------------------------VLSKPENPV-------KLIYCTRTVHEMEKTLA 85
+ +P K+IY +RT ++ + ++
Sbjct: 65 DTISARKIAERLQGELFPDRALSSWGSAAAADGDPTACYTDIPKIIYASRTHSQLTQVIS 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHMQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSRHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + L + R
Sbjct: 223 FMPYNYLLDAKSRRAHSIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDR 281
Query: 266 INQE 269
+ +E
Sbjct: 282 VLEE 285
>gi|351714866|gb|EHB17785.1| Regulator of telomere elongation helicase 1, partial
[Heterocephalus glaber]
Length = 1184
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
++V++TSGTL+P+ + + V + + + V+ RG D +S+ FD R
Sbjct: 467 RTVILTSGTLAPLSSFVLEMQIPFPVCLENPHVIDKHQLWVGVIPRGPDGAELSSAFDKR 526
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M+ +A W + +++ K +F+E
Sbjct: 527 FSEECLSSLGKTLGNIARVVPHGLLVFFPSYPVMENSLAFWRARDLARKVEVLKPLFVEP 586
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + +D Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 587 RSKGSFSEVIDAYYQRVASPGSSGATFLAVCRGKASEGLDFSDINGRGVIITGLPYPPRM 646
Query: 628 SKILLARLEYLRDTFQIKE--GDFLTF------DALRQAAQCVGRVIRSKADYGMMIFAD 679
++ ++++L + + G FL+ A R Q +GRVIR + DYG + D
Sbjct: 647 DPRVVLKMQFLDEMRGQSQAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCD 706
Query: 680 KRYSRHDKRSKLPGWILSHLR 700
R++ D +++LP W+ +L+
Sbjct: 707 HRFTYADAKAQLPSWVRPYLK 727
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 133/306 (43%), Gaps = 66/306 (21%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LNGVTVDFPFQP-YQCQQEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLW 64
Query: 60 ---------------------------VLSKPENPV-------KLIYCTRTVHEMEKTLA 85
+ P+ K+IY +RT ++ + +
Sbjct: 65 DTVSARKIAERAQGELFLDQALSAWGSATAADGEPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ ++ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 EL--------RNTAYRPRVCVLG--SREQLCIHPEVKKQESNHMQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELVTPILDIEDLVKNGSKHKVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHNIDL-KGTVVIFDEAHNVEKMCEESASFDL---TPHDVASGLDA 278
Query: 266 INQEIE 271
I Q +E
Sbjct: 279 IGQVLE 284
>gi|448110971|ref|XP_004201733.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359464722|emb|CCE88427.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 18/279 (6%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP----MV 492
D S + + + + +++ GT+ P D + + L F V S+S K + D I P +V
Sbjct: 520 DPSEIFRDIVSKCRCLILCGGTMEPTDDFKKYL-FPYVPSQSIK-KFSCDHIIPDKNLIV 577
Query: 493 LTRGSDQLPV-STKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
G V ++ RSD + N G + + G V FF SY Y++E+ A W
Sbjct: 578 FPIGKYGNSVFEFSYEKRSDLNMILNLGNAINGICEKTKGGAVVFFPSYRYLNEVKAHWQ 637
Query: 552 DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG-AVFFSVARGKVAEGIDFDR 610
GIL+ I + V+ E D + T L++YR + + G A+ F+V GK++EGI+F
Sbjct: 638 THGILRSIENRRTVYYEPTDSADVTQILNSYRTSIESDNGLAILFAVVGGKLSEGINFAD 697
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF--------LTFDAL--RQAAQ 660
R VIM G+P+ + S L+AR E++ T + G + +D L R Q
Sbjct: 698 DLARAVIMVGMPYPNSTSADLIARKEFIEKTVLEENGSVKDAKIASKIFYDNLCMRAVNQ 757
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+GR IR K D ++ D+RY +SKL GW+ L
Sbjct: 758 SIGRSIRHKDDSSLIYLIDQRYGYESVQSKLSGWVKKRL 796
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P K+I+ +RT ++ + +L L ++ G +I + L+SRK LC++ RV
Sbjct: 194 ECPNKIIFSSRTHSQLSQFAHQLGLT-SFNPTFEGIPERIKFVPLASRKQLCIHPRVSHL 252
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE---KAASAAVLPPGVYTLQDLR 181
+ +S++ AC + + E C F + K + + ++ ++DL
Sbjct: 253 TSLESINEAC----------IDLQQNTKEGCTFNPKHGSTLKKKFSDLSFTKIHDIEDLG 302
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
+ G CPY+ RH ++ A V+ YQ LL +++ ++ ++++V DEAHN+ +
Sbjct: 303 SLGTGLRICPYYSVRHGLKSAEVIACPYQILLQKSAREMLNVDVD-DAIIVIDEAHNLID 361
Query: 242 VCIEALSVSVRRQTLE 257
I SVS+ +E
Sbjct: 362 TIISLYSVSINLLEIE 377
>gi|195049542|ref|XP_001992741.1| GH24926 [Drosophila grimshawi]
gi|193893582|gb|EDV92448.1| GH24926 [Drosophila grimshawi]
Length = 843
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 9/264 (3%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+ ++++I GT+ P +L +L P VV R + + D + P VL G
Sbjct: 552 IISEARALIIAGGTMQPTHELTAQLFAHCPERVVERFYSHVVPPDAVLPFVLPAGPTGTK 611
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ + R+ + +L + S++P G+VCF SY Y++ + A SG L+ I Q
Sbjct: 612 LCFSYTQRTSFAMLNELRMVLQNLCSVLPAGVVCFLPSYDYLETVYAHLEQSGALQRIGQ 671
Query: 562 HKLVFIETQDVVETTLALDNY-----RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
K +F E L Y + A G GA+ SV GK++EG++F GR V
Sbjct: 672 RKRIFREKAGGGGVEQLLQQYADAISQSAGPAGGGALLLSVVGGKLSEGLNFADDLGRGV 731
Query: 617 IMFGVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMM 675
I+ G+P+ + L R+ +L DT G ++ ++ QC+GR +R DY +
Sbjct: 732 IVVGLPYPNRTAPELKERMRHLDDTLGYAAGNEYYENLCMKAVNQCIGRSVRHIRDYACV 791
Query: 676 IFADKRYSRHDKRSKLPGWILSHL 699
D+RY+ + KLP WI H+
Sbjct: 792 YLLDERYASERIQKKLPAWIARHI 815
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
V++ YC+RT ++ + +AEL+ +T H + I L SR LC++++V N
Sbjct: 185 VQIFYCSRTHAQLAQIVAELR-----KTPH---GKSVRCISLGSRHQLCIHAQVRRISNV 236
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQ 187
++ C A + + PN ++ A++ + +++L G
Sbjct: 237 ALINERCLD-MARLKPSCPHKAPN--------QVQRMRDASL--SELMDIEELATQGAAC 285
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEAL 247
G CPY+ R + A +V+ Y LL + ++ + +V++ DEAHN+ + +
Sbjct: 286 GGCPYYATRSALAQAQLVLLPYPLLLQRSTRQQLGIDL-RGAVIIVDEAHNLLDTIAQLH 344
Query: 248 SVSVRRQTLEGATRNLSRINQEIER 272
S + R L+ A + L+ + R
Sbjct: 345 SSELSRDQLQLARQQLAAYKERYAR 369
>gi|440797062|gb|ELR18157.1| DNA repair helicase (rad3) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1026
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 27/267 (10%)
Query: 450 QSVVITSGTLSPIDL--------YP-RLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
+++++TSGTLSP+ +P RL N H + + VL+ G
Sbjct: 476 RNIILTSGTLSPLASTAAELKIPFPIRLENSHVIQPSQVWVG---------VLSNGPSDY 526
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN-------DS 553
P+++ F R + G L+ + IVP+G++ FF SY+ + + W +
Sbjct: 527 PLNSSFKTRETEDYKQALGNALINFMRIVPNGLLVFFPSYTALTTCVDAWKRPDEQARNG 586
Query: 554 GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYG 613
I + + ++K IE ++ + LA+++Y GAVFF+V RGKV+EG+DF G
Sbjct: 587 SIWERMCRYKQAIIEPREAFQFKLAMEDYYAKVKTEGGAVFFAVCRGKVSEGLDFSDDNG 646
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYG 673
R V++ G+PF + + YL QI L A+R Q VGRVIR D+G
Sbjct: 647 RAVVITGLPFPSLTDAKVKQKRSYLDHQRQILGTSSL--QAMRAVNQAVGRVIRHSRDHG 704
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHLR 700
+I AD+R+ +S L W+ ++
Sbjct: 705 AIILADQRFGMATNQSGLSLWLRPQVK 731
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P ++IY +RT ++ + + ELK Y R L SR+ LCVN V+
Sbjct: 129 EKPPRIIYTSRTHSQLTQVMKELKRTA-YSPRM---------TVLGSRRQLCVNPDVVNT 178
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT-LQDLRAF 183
RD CR S +++ E + G T +++L
Sbjct: 179 PGRDH---KCRSLVTSRRCDYYNRLDDLKKSEQLRGSCNGMFGEEVAEGEITDIEELLQS 235
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G+ +G C ++LAR + A+++ Y YL+DP + + ++ + +V++FDEAHN+++VC
Sbjct: 236 GRDRGLCAFYLARELQYSADIIFAPYNYLIDPAIRRSLGVDL-RGAVIIFDEAHNVESVC 294
Query: 244 IEALSVSVRRQTLEGATRNLSR 265
++ S +R ++ A + L R
Sbjct: 295 EDSASFDLRVADMKVAIKELER 316
>gi|321469304|gb|EFX80285.1| hypothetical protein DAPPUDRAFT_128417 [Daphnia pulex]
Length = 892
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 9/275 (3%)
Query: 430 VLQLSCHDASLAVKPVFDR-FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C ++ + + + +++TSGTLSP++ + L V+ ++ +
Sbjct: 448 VLSYWCFSPGFGMRDLVEEGARCLILTSGTLSPLNSFAAELQVPFPVTLENPHIISSSQV 507
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+T G D + + + RS+ ++ G+ + +VPDG++ FF SY M
Sbjct: 508 LVGVVTHGPDGTQLDSSYKNRSNSQYVQSLGRTIRSTAQVVPDGLLVFFPSYPVMKACQE 567
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W SG+ I Q K +F+E A+ + A + +GA F +V RGKV+EG+
Sbjct: 568 AWQLSGLWDAINQVKPIFVEPNSKEGFQEAMTGFYNAVASEDRKGACFMAVCRGKVSEGL 627
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQ 660
DF GR VI+ G+P+ + ++ + +YL D + + LT +A R Q
Sbjct: 628 DFCDGNGRAVIITGLPYPPSRDPRVMEKQKYLEDNRKNPQFKGLTGQQWYRLEATRAVNQ 687
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+GRVIR + DYG ++ D+R+S D +L W+
Sbjct: 688 AIGRVIRHQKDYGAILLCDQRFSGKDIIQQLSAWV 722
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 58/283 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK- 63
L +V + FP+ Y Q +M + L + LLE PTGTGKT+ LL ++ ++
Sbjct: 6 LNNVPIEFPF-QPYDVQEKFMERVIECLQKGVNGLLESPTGTGKTLCLLCSTLGWLATRK 64
Query: 64 ---------------------------------PENPV-KLIYCTRTVHEMEKTLAELKL 89
P V K+IY +RT ++ + ++ELK
Sbjct: 65 AQIQSGQLAGDMGVDIKNQLSNATGLGWGDAATPGAGVPKIIYASRTHSQLSQVISELK- 123
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAEN 149
R++ K+ +G SR LC++ V N C RT +
Sbjct: 124 --RSSYRYM----KVCILG--SRDQLCIHPEVSKETNNAVKLHMCHARTTT--------- 166
Query: 150 PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
TC F N + V ++DL GK+ CPYF+ + + + A+++ Y
Sbjct: 167 ---RTCYFHTNLDAKKEEPDFKMDVLDIEDLVTLGKKHSACPYFMTKEIRKGADIIFMPY 223
Query: 210 QYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVR 252
YLLDPKV I + E+Q ++V+FDEAHN++ +C E+ S+ +R
Sbjct: 224 NYLLDPKVRKIHNIELQG-NIVIFDEAHNVEKMCEESSSIELR 265
>gi|8886948|gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
Length = 1273
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 155/643 (24%), Positives = 249/643 (38%), Gaps = 139/643 (21%)
Query: 110 SSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAV 169
+SRK+ C N VL +D+VD CR L + NI+ C F+N K S
Sbjct: 214 ASRKHYCTNRHVLG---KDNVDDECR--------LLLKDKANIQ-CSEFKNVNKITSHPS 261
Query: 170 LPP----GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
L P V+ ++DL GK CPYF + M + A +V Y Y+++P + + ++
Sbjct: 262 LQPRGHNEVHDIEDLVKVGKNVRGCPYFASWSMAENAQLVFCPYSYIVNPVIRAGVEVDL 321
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR---INQEIERFKATD----- 277
K ++++FDEAH + + I S + T+ +++R + E+E+
Sbjct: 322 -KGAIIIFDEAHMLLMLMIRP---STKSFTVHSNMEDIAREAELQNELEQMSVAQPMIYQ 377
Query: 278 -----AGRLRAEYNRLVEGLALRG--NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHV 330
L + R + LA R + ++W + AL +E NI R E F +
Sbjct: 378 PLCEVVEGLISWIGRKKDSLAKRDFQHYFSSWTGDKAL-----RELEESNITR-ECFPIL 431
Query: 331 LRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTD 390
L + +R E E +S ++ +T T F H L D
Sbjct: 432 LECFTKAIRTSKEAEMESDMLYLSGISVLTLEELFSSLTYFFSRNGSHIL---------D 482
Query: 391 EFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQ 450
L +Q GT+T FS L C + ++ K + D
Sbjct: 483 YQLGLQRSTKRGDPSGTWTHTFS-------------------LWCMNPAVVFKDLADISL 523
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC-ICPMVLTRGSDQLPVSTKFDMR 509
SV++TSGTLSP++ + L S + + + ++ G P++ +
Sbjct: 524 SVILTSGTLSPMNSFSSELGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKTA 583
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIE- 568
GK L E+ +IVP G + FF SY M+++ W ++ + K +F+E
Sbjct: 584 DAYSFQDALGKSLEEICTIVPGGSLVFFPSYKLMEKLCMRWRETEQWSRLCLKKDLFVEP 643
Query: 569 ---TQDVVETTLA------------LDNYRKACDCG-----------RGAVFFSVARGK- 601
QD ++ L + R+A G +GA F +V RGK
Sbjct: 644 RGGAQDEFDSVLKGYYDSIRGKNKIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKS 703
Query: 602 ----VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQ 657
V+EGIDF R V + AL Q
Sbjct: 704 MLLQVSEGIDFADDNARAV----------------------------------AYRALNQ 729
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
AA GR IR + DYG +IF D+RY R+ + W+ ++
Sbjct: 730 AA---GRCIRHRFDYGAIIFLDERYKEQRNRASISKWLRQSIK 769
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDA---KGHC--LLEMPTGTGKTIALLSLI 56
++++ + V FPY Y Q ++M + LD GHC LLE PTGTGK+++LL +
Sbjct: 26 VYQIGGLQVEFPY-QPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSV 84
Query: 57 TSY 59
++
Sbjct: 85 LAW 87
>gi|197098236|ref|NP_001124929.1| regulator of telomere elongation helicase 1 [Pongo abelii]
gi|75042437|sp|Q5RE34.1|RTEL1_PONAB RecName: Full=Regulator of telomere elongation helicase 1
gi|55726407|emb|CAH89973.1| hypothetical protein [Pongo abelii]
Length = 1302
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C L+++ V +S+++TSGTL+P+ + + V + + I
Sbjct: 453 VLSYWCFSPGLSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQI 512
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ RG D +S+ FD R + GK L +VP G++ FF SY M++ +
Sbjct: 513 WVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNTARVVPCGLLIFFPSYPVMEKSLE 572
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGI 606
W + +++ K +F+E + + + Y R A GA F +V RGK +EG+
Sbjct: 573 FWRARDLARKMEALKPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGL 632
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF---------DALRQ 657
DF GR VI+ G+P+ + ++ ++++L D + + G F A R
Sbjct: 633 DFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRA 691
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ H+R
Sbjct: 692 VNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVR 734
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 141/323 (43%), Gaps = 68/323 (21%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE TGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN--------PV-------KLIYCTRTVHEMEKTL 84
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERVQGELFPDRALSSWGNAAAAAAGDPIACYTDIPKIIYASRTHSQLTQVI 124
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRA 144
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 NELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHIQIHLCRKKVAS---- 170
Query: 145 LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANV 204
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A++
Sbjct: 171 --------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADI 222
Query: 205 VVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLS 264
+ Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 IFMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLD 278
Query: 265 RINQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ K G E++
Sbjct: 279 IIDQVLEEQTKTAQQGEPHPEFS 301
>gi|403223632|dbj|BAM41762.1| helicase [Theileria orientalis strain Shintoku]
Length = 954
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 147/293 (50%), Gaps = 35/293 (11%)
Query: 438 ASLAVKPVFDRFQ-----SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRD-CICPM 491
A L P F R + S+++TSGTL P+D+ R + + + F++ L D I P
Sbjct: 518 ACLQPIPTFIRIKREGLRSLILTSGTLGPLDVLERHIGGNYL---KFEIKLQNDHVIDPK 574
Query: 492 -----VLTRGSDQLP--VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
V+T G+D+ P +S+ ++ R D G+ L + VP G++ FF SY M+
Sbjct: 575 RVWAGVVT-GNDEDPNILSSAYNKRGDLNYITALGRALYGFIKSVPSGVLVFFGSYMVMN 633
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQ--------DVV-ETTLAL-DNYRKACDCGRGAVF 594
++ W G+ ++ K +F+E + D++ E+T AL Y+ D GR ++F
Sbjct: 634 NTLSCWKRLGLYSKMEMEKSIFVENRPPGFVRDNDIIPESTQALFTRYKDNIDSGRASMF 693
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL---- 650
F++ RG++AEGIDF Y R + + G+P+ +++YL D + G+ L
Sbjct: 694 FAICRGRMAEGIDFSDDYCRGIFLCGIPYPSRYEDTTALKMDYL-DKLSVATGENLNLSH 752
Query: 651 ---TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
T A++ Q +GR IR DYG ++ AD R+ ++ + W+L L+
Sbjct: 753 EWYTTQAIKAINQAIGRSIRHIEDYGAIMLADYRFRFPPVKTSISKWVLDRLK 805
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 71/307 (23%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS----- 62
+ V FPY+ Y Q S+M + +A+ + LLE PTGTGKT++L+ + +LS
Sbjct: 14 IDVKFPYEP-YELQKSFMESVIKAIKDGKNALLESPTGTGKTLSLICASLACILSNKTNK 72
Query: 63 -----------------------------------KPE----NPVKLIYCTRTVHEMEKT 83
KP+ N + +IY +RT ++++
Sbjct: 73 ILGGKTLEEEKKVNQDDILVSQLISLKGAIEKDLKKPKSILSNKMNIIYTSRTHSQLKQV 132
Query: 84 LAELKLLHNYQTRHL-GPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACR----KRT 138
++E++ + H G A +LA SR LC+N + D ++ CR R
Sbjct: 133 ISEVRKSSYCKEFHQKGLKAALLA----SRDLLCINP-AKGNLSGDHLNNFCRLLVQNRK 187
Query: 139 ASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHM 198
+ +L N E +F E + ++D+ GK+ +CPYF +
Sbjct: 188 CIYYNSLRGSKNN-EEAQFNE--------------LVDIEDMVKMGKRGTFCPYFAVKDA 232
Query: 199 VQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEG 258
+ A++++ Y YLL P V + + K S+V+ DEAHN+++V EA S V++ L
Sbjct: 233 QENADLILVPYNYLLSPSVRDAMDLKT-KNSIVIIDEAHNVESVAEEASSFFVKQTDLAK 291
Query: 259 ATRNLSR 265
L R
Sbjct: 292 FIEALKR 298
>gi|323510681|ref|NP_116575.3| regulator of telomere elongation helicase 1 isoform 2 [Homo
sapiens]
Length = 1243
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 497 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 556
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 557 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 616
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 617 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 676
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 677 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 735
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 736 DHRFAFADARAQLPSWVRPHVR 757
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 147/338 (43%), Gaps = 75/338 (22%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRH----------------LGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
EL+ +Y++R L P + + L SR+ LC++ V E+
Sbjct: 125 ELRNT-SYRSRCRATLWVLETAPPRPTVLSPTRPKVCV-LGSREQLCIHPEVKKQESNHL 182
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW 189
CRK+ AS +C F+ N E+ + L + ++DL G +
Sbjct: 183 QIHLCRKKVAS------------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRV 230
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CPY+L+R++ Q A+++ Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S
Sbjct: 231 CPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASF 289
Query: 250 SVRRQTLEGATRNLSRINQEI-ERFKATDAGRLRAEYN 286
+ L L I+Q + E+ KA G E++
Sbjct: 290 DLTPHDL---ASGLDVIDQVLEEQTKAAQQGEPHPEFS 324
>gi|149029745|gb|EDL84902.1| rCG63103 [Rattus norvegicus]
Length = 396
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPV-VSRSFKMS----LTRDCICPMVLTRGSD 498
V +++VI GT+ P+ D +LL V SR + S + D I P+++ G
Sbjct: 108 VVKECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHVIPPDNILPLIICSGPS 167
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCF SY Y+ ++ A W+ +G+L
Sbjct: 168 NQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEYLRQVHAHWDKTGLLAR 227
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKA-CDCGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y C GA+ SV GK++EGI+F
Sbjct: 228 LSVRKKIFQEPKRASQVEQVLTAYSTCIASCSHSEGHLTGALLLSVVGGKMSEGINFSDD 287
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCVGRV 665
GR V+M G+P+ S L ++ YL T Q G L + ++ Q +GR
Sbjct: 288 LGRCVVMVGMPYPNIKSPELQEKMAYLDQTIPRTHGQPPPGTVLIENLCMKAINQSIGRA 347
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
IR + D+ ++ D RY+R +KLP WI
Sbjct: 348 IRHQKDFASIVLLDHRYARPSILAKLPAWI 377
>gi|426392489|ref|XP_004062582.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Gorilla gorilla gorilla]
Length = 1220
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L LS N K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDAIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHIQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGERHPEFS 300
>gi|7706541|ref|NP_057518.1| regulator of telomere elongation helicase 1 isoform 1 [Homo
sapiens]
gi|229462743|sp|Q9NZ71.2|RTEL1_HUMAN RecName: Full=Regulator of telomere elongation helicase 1; AltName:
Full=Novel helicase-like
gi|6969265|gb|AAF33687.1|AF217795_1 helicase-like protein NHL [Homo sapiens]
gi|119595644|gb|EAW75238.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595645|gb|EAW75239.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595647|gb|EAW75241.1| hCG22751, isoform CRA_a [Homo sapiens]
Length = 1219
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|297842879|ref|XP_002889321.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
gi|297335162|gb|EFH65580.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
Length = 868
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 137/298 (45%), Gaps = 51/298 (17%)
Query: 445 VFDRFQSVVITSGTLSPID-LYPRLLNFHPVVSRSF---KMSLTRDCICPMVLTRGSDQL 500
V D +V++ GTL PI+ RL + P F + + I P+ ++ G
Sbjct: 539 VVDEAHAVILAGGTLQPIEETRERLFPWLPSDQLQFFSCSHIVPSESIMPIAVSHG---- 594
Query: 501 PVSTKFDM----RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
P FD RS + + G L+ +V++VP+G++ FF S+ Y ++ W++SGIL
Sbjct: 595 PSGQSFDFSHSSRSSTRMIQELGLLMSNLVAVVPEGVIVFFSSFEYETQVHTAWSNSGIL 654
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
+ IM+ K VF E + E L +Y++A + RGA+ +V GKV+EGI+F R V
Sbjct: 655 RRIMKKKRVFREPRRNTEVEAVLRDYKEAIESERGAIMLAVVGGKVSEGINFSDSMCRCV 714
Query: 617 IMFGVPFQYTLSKILLARLEY---LRDTFQIKEGDFLTFDA------------------- 654
+M G+P+ LL R+++ L D+ +K L D+
Sbjct: 715 VMVGLPYPSPSDIELLERIKHIEGLGDSDSVKPSVTLVDDSYYSGDVQAGFGVLKSCKRR 774
Query: 655 ---------LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR--------SKLPGWI 695
++ Q +GR IR + DY ++ D RYS + +KLP WI
Sbjct: 775 GKEYYENLCMKAVNQSIGRAIRHEKDYASILLVDARYSNDPSKRTSHSHPSNKLPKWI 832
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 22/202 (10%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K+ +C+RT ++ + + EL R A+ + + L SRKNLC+N VL N
Sbjct: 171 KVFFCSRTHSQLSQFVKEL--------RKTVFASILNVVSLGSRKNLCINEDVLKLANVT 222
Query: 129 SVDAACRKRTASWVRALAAE---NPNIET--------CEFFENY--EKAASAAVLPPGVY 175
++ +C ++ + N+ C + ++ A
Sbjct: 223 RINESCLDLQKKKKSQVSKKKNLGANVRIGRTKASCGCPLLRKHKLQREFKAESFQQEAM 282
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
++DL G+Q CPY+ +R M A++V+ YQ LL + + K SVV+ DE
Sbjct: 283 DIEDLVQLGRQMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSL-KNSVVIIDE 341
Query: 236 AHNIDNVCIEALSVSVRRQTLE 257
AHN+ ++ + + LE
Sbjct: 342 AHNLADILLSMHDAKITLSQLE 363
>gi|426392491|ref|XP_004062583.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Gorilla gorilla gorilla]
Length = 1244
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 497 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 556
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 557 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 616
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 617 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 676
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 677 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 735
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 736 DHRFAFADARAQLPSWVRPHVR 757
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 75/338 (22%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L LS N K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDAIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRH----------------LGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
EL+ +Y++R L P + + L SR+ LC++ V E+
Sbjct: 125 ELRNT-SYRSRCRATLWVLETAPPRPTVLSPTRPKVCV-LGSREQLCIHPEVKKQESNHI 182
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW 189
CRK+ AS +C F+ N E+ + L + ++DL G +
Sbjct: 183 QIHLCRKKVAS------------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRV 230
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CPY+L+R++ Q A+++ Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S
Sbjct: 231 CPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASF 289
Query: 250 SVRRQTLEGATRNLSRINQEI-ERFKATDAGRLRAEYN 286
+ L L I+Q + E+ KA G E++
Sbjct: 290 DLTPHDL---ASGLDVIDQVLEEQTKAAQQGERHPEFS 324
>gi|405960555|gb|EKC26471.1| Fanconi anemia group J protein [Crassostrea gigas]
Length = 1410
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 143/591 (24%), Positives = 244/591 (41%), Gaps = 81/591 (13%)
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESV 230
+ ++D K CPYF R + A++V Y YL+DP +I K M+ K+ V
Sbjct: 279 AWDIEDFVGLSKNIKVCPYFATRGLRSGADIVFCPYNYLIDP----VIRKSMEISLKDQV 334
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVE 290
V+ DEAHN+++ ++ + LE A L E+ +++ A LR +L
Sbjct: 335 VILDEAHNMEDTSRDSAGEKIGDDALEKAVNELD----EMIKYEILTAEHLRVR--QLCA 388
Query: 291 GLA--LRGNLPN-----------AWLSNPALPSDI---LKEAVPGNIRRAEHFLHVLRRL 334
GL +R N N W S DI L++ G +HF + + L
Sbjct: 389 GLLGLIRDNQDNLQNMDFDHEYKCWSS-----YDIVVRLEKIGAG----PKHFQDMQQHL 439
Query: 335 VQYLRGRLETENVEKE--GPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEF 392
L+ E V K+ G V ++S T + L ++ L D+
Sbjct: 440 KAVFEEALDKETVVKDMSGRVVKISSAT-------------LQTLEHIVKVLTYLYKDDL 486
Query: 393 LHIQTICDFATLVGTYTRGFS---IIIEPFDERMPHIPDPVLQLS----CHDASLAVKPV 445
++ YTR + + + R P QL+ C + +A
Sbjct: 487 KYVTDYRMAVVKATVYTRNPNTDDMWLNSKRRRGGQSMIPTTQLTLNFWCMNPGVAFSD- 545
Query: 446 FDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTK 505
+SVV+TSGTLSPI+ + L + + + + +G +
Sbjct: 546 LSVCRSVVLTSGTLSPINSFESELGVPFPIKLEANHVIEDKQVWVGAVGQGPRGGTLEAV 605
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLV 565
+ G L++ + VP G++CF SYS + ++ W +G+ + I +HK V
Sbjct: 606 YRSVETLQFQDELGDLVLRVCQHVPHGVLCFVPSYSTLSKLRNRWEITGLWERIKEHKEV 665
Query: 566 FIET--------QDVVETTLALDNYRKACDCGR--GAVFFSVARGKVAEGIDFDRHYGRL 615
+E +D++ N + G+ GA+F +V RGKV+EG+DF +Y R
Sbjct: 666 MVEPRSSERVDFEDIMRQFYDSVNMLQDQTEGKKTGALFVAVFRGKVSEGMDFADNYARA 725
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----DFLTFDALRQAAQCVGRVIRSKA 670
VI G+P+ + + + EY + +++ G ++ A R Q +GR IR +
Sbjct: 726 VITVGIPYPNSKDVQVKYKQEY-NNMYRLSRGLLSGSEWYDIQAFRALNQALGRCIRHRK 784
Query: 671 DYGMMIFADKRYSRH-DKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLR 720
D+G +I D R+ R+ +K L W+ R H + D A+ +F +
Sbjct: 785 DWGAIILVDNRFVRNQNKVQGLSKWV---RRKVHTYQTFDSAITSIDKFTK 832
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
+ V V FP YP Q+S M ++ + ++ + +CLLE PTG+GK++ALL
Sbjct: 26 IHGVEVVFPC-KPYPSQFSMMEKVIKGIERRENCLLESPTGSGKSLALL 73
>gi|194379638|dbj|BAG63785.1| unnamed protein product [Homo sapiens]
Length = 1243
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 497 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 556
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 557 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 616
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 617 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 676
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 677 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 735
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 736 DHRFAFADARAQLPSWVRPHVR 757
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 146/338 (43%), Gaps = 75/338 (22%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +L PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILGSPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRH----------------LGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
EL+ +Y++R L P + + L SR+ LC++ V E+
Sbjct: 125 ELRNT-SYRSRCRATLWVLETAPPRPTVLSPTRPKVCV-LGSREQLCIHPEVKKQESNHL 182
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW 189
CRK+ AS +C F+ N E+ + L + ++DL G +
Sbjct: 183 QIHLCRKKVAS------------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRV 230
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CPY+L+R++ Q A+++ Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S
Sbjct: 231 CPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASF 289
Query: 250 SVRRQTLEGATRNLSRINQEI-ERFKATDAGRLRAEYN 286
+ L L I+Q + E+ KA G E++
Sbjct: 290 DLTPHDL---ASGLDVIDQVLEEQTKAAQQGEPHPEFS 324
>gi|374674404|dbj|BAA83040.3| KIAA1088 protein, partial [Homo sapiens]
Length = 1400
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|351702333|gb|EHB05252.1| Putative ATP-dependent RNA helicase DDX11-like protein
[Heterocephalus glaber]
Length = 953
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 43/321 (13%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLL-----NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++VVI GT+ P+ D +LL VV S + D I P+VL G
Sbjct: 635 VVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVIPPDNILPLVLCSGPT 694
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y +++A W SG+L
Sbjct: 695 NQQLEFTYQKREVPAMMDEAGRILCNLCNVVPGGLVCFFPSYEYQHQVLAHWGKSGLLTR 754
Query: 559 IMQHKLVFIETQDV--VETTLA-----LDNYRKACDCGRGAVFFSVARGKVAEGIDFDRH 611
+ K +F E + VE LA +++ +A G GA+ +V GK++EGI+F
Sbjct: 755 LAVRKKIFQEPKRAGQVEQVLAAYARCIESCARASGPGTGALLLAVVGGKMSEGINFSDD 814
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTF-----QIKEGDFLTFD-ALRQAAQCV--- 662
GR V+M G+P+ + L ++ YL Q+ G L + ++ Q V
Sbjct: 815 LGRCVVMVGMPYPSIRAPELQEKMAYLDQRLPGTPGQVPPGKALVENLCMKAVNQSVGEP 874
Query: 663 ------------------GRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
GR IR + D+ ++ D+RY+R +KLP WI + +
Sbjct: 875 GAVLALDAQPGTDGQRGGGRAIRHQRDFASIVLLDQRYARPPVLAKLPAWIRDRV---EV 931
Query: 705 NLSTDMALHIAREFLRKMAQP 725
+ A R+F R+ P
Sbjct: 932 KATFGAAFAALRKFHREKVGP 952
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 28/207 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + + E L N R LG I + CV + +++
Sbjct: 277 TKIYYCSRTHSQLAQFVQE-NLCVNEDVRSLGSVQLI--------NDRCVEIQRSQHKSK 327
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQ 187
+ KR RA C F+ + + + V ++ L A GK+
Sbjct: 328 SRAEEEKPKRRRQEARA---------ACPFYNHEQMQLLRDEILVEVRDVEQLVALGKEA 378
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEAL 247
CPY+ +R + A +VV Y + AGI +Q + VV+ DEAHN+ +
Sbjct: 379 RACPYYGSRLAIAAAQLVVLPYPTR---QAAGI---RLQGQ-VVIIDEAHNLIDTITGIH 431
Query: 248 SVSVRRQTLEGATRNLSRINQEIERFK 274
SV V L + S++ Q ER++
Sbjct: 432 SVEVTGSQL---CQAHSQLLQYTERYR 455
>gi|168269672|dbj|BAG09963.1| tumor necrosis factor receptor superfamily member 6B precursor
[synthetic construct]
Length = 1400
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAHEGEPHPEFS 300
>gi|426392493|ref|XP_004062584.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 3
[Gorilla gorilla gorilla]
Length = 1301
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L LS N K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDAIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHIQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGERHPEFS 300
>gi|348554129|ref|XP_003462878.1| PREDICTED: regulator of telomere elongation helicase 1-like [Cavia
porcellus]
Length = 1250
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 10/261 (3%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+++++TSGTL+P+ + + V + + + V+ RG D +S+ FD R
Sbjct: 467 RTLILTSGTLAPLSSFALEMQIPFPVCLENPHVIEKHQLWVGVVPRGPDGAELSSAFDKR 526
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 527 FSEECLSSLGKTLGNIARVVPHGLLVFFPSYPVMEKSLEFWRARDLARKLEALKPLFVEP 586
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ V + +D Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 587 RSKVSFSEVIDAYYQRVASPGSSGATFLAVCRGKASEGLDFSDTNGRGVIITGLPYPPRM 646
Query: 628 SKILLARLEYLRDT-FQIKEG-DFLTF------DALRQAAQCVGRVIRSKADYGMMIFAD 679
++ ++++L + Q + G FL+ A R Q +GRVIR + DYG + D
Sbjct: 647 DPRVVLKMQFLDEMRGQNQPGSQFLSGQEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCD 706
Query: 680 KRYSRHDKRSKLPGWILSHLR 700
R++ D +++LP W+ +L+
Sbjct: 707 HRFTYADAKAQLPSWVRPYLK 727
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 63/330 (19%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ + +Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQPYHCQQ-EYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L + LS N K+IY +RT ++ + +
Sbjct: 65 DTISARKIAERVQGELFLNQDLSSWGNATAADGDSIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ ++ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 EL--------RNTAYRPRVCVLG--SREQLCIHPEVKKQESNHVQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELVTPILDIEDLVKKGSKHKVCPYYLSRNLKQQADLI 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + + + +
Sbjct: 223 FMPYNYLLDTKSRKAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDVASGLEAIDQ 281
Query: 266 INQEIERFKATDAGRLRAEYNRLVEGLALR 295
+ +E R +L + GL ++
Sbjct: 282 VLEEQTRMAQQSELQLELSMDPTSSGLNMQ 311
>gi|119595650|gb|EAW75244.1| hCG22751, isoform CRA_e [Homo sapiens]
Length = 1400
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|402881970|ref|XP_003904529.1| PREDICTED: regulator of telomere elongation helicase 1 [Papio
anubis]
Length = 1301
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VT+ FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTIDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWQEHLR 64
Query: 54 --------------SLITSYVLSK-------PENPV-------KLIYCTRTVHEMEKTLA 85
L + LS E+P+ K+IY +RT ++ + +
Sbjct: 65 DTISARKIAERVQGELFPNQALSSWGNTAAAAEDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHMQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ L + ++DL G + CPY+L+R++ Q A++V
Sbjct: 170 -------RSCHFYNNVEEKGLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIV 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHSIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ K G E++
Sbjct: 279 IDQVLEEQTKTAQLGEPHPEFS 300
>gi|297259357|ref|XP_001113864.2| PREDICTED: regulator of telomere elongation helicase 1-like [Macaca
mulatta]
Length = 1347
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 519 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 578
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 579 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 638
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 639 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 698
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 699 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 757
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 758 DHRFAFADARAQLPSWVRPHVR 779
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VT+ FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTIDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSK-------PENPV-------KLIYCTRTVHEMEKTLA 85
L + LS E+P+ K+IY +RT ++ + +
Sbjct: 65 DTISARKIAERVQGELFPNQALSSWGNAAAAAEDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHMQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ L + ++DL G + CPY+L+R++ Q A++V
Sbjct: 170 -------RSCHFYNNVEEKGLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIV 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHSIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ K G E++
Sbjct: 279 IDQVLEEQTKTVQLGEPHPEFS 300
>gi|119595646|gb|EAW75240.1| hCG22751, isoform CRA_b [Homo sapiens]
gi|119595651|gb|EAW75245.1| hCG22751, isoform CRA_b [Homo sapiens]
Length = 1300
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|194387848|dbj|BAG61337.1| unnamed protein product [Homo sapiens]
Length = 1004
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTG+T+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGRTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|7012929|gb|AAF35243.1| helicase-like protein NHL [Homo sapiens]
Length = 1400
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|145355132|ref|XP_001421822.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582061|gb|ABP00116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 849
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 140/309 (45%), Gaps = 31/309 (10%)
Query: 421 ERMPHIPDPV-LQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-----DLYPRLLNFHPV 474
ER DP L+ DA+ K V ++ +SV++ GTL+PI L+P L +
Sbjct: 515 ERATPEGDPATLRFVLLDAASRFKRVVEQARSVILVGGTLAPIPELVAQLFPDLQSQTAP 574
Query: 475 VSRSFKMS-------LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVS 527
+ ++ + RD + P+ L+ G + + R+D V G++L+
Sbjct: 575 APGARQLKTFTCGHIIPRDNLLPIALSAGPTGVALDFTHGARADVSVIDELGRILLNACR 634
Query: 528 IVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY----- 582
+ P G FF S+ Y DE+ A W +G + I K V+ E +D L +Y
Sbjct: 635 VSPGGACVFFPSFKYADEVYARWESTGAMASIRGVKDVYREPRDASTLEQCLRDYAASVS 694
Query: 583 RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF 642
R A GAV V GK++EGI+F GRLV+M G+P+ L AR+++L DT
Sbjct: 695 RGASTRNGGAVLLCVVGGKLSEGINFKDELGRLVVMVGLPYANVADAELKARMDHL-DTG 753
Query: 643 QIKEGDFLT-FDAL--RQAAQCVGRVIRSKADYGMMIFADKRY---------SRHDKRSK 690
+G ++AL R Q +GR IR DY ++ DKR+ SR
Sbjct: 754 PGNQGRGRAYYEALCMRGVNQSIGRAIRHVGDYACILLCDKRWGAFGSATNGSRTKAAKA 813
Query: 691 LPGWILSHL 699
LP WI L
Sbjct: 814 LPEWIEQRL 822
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAA----KILAIGLSSRKNLCVNSRVLAA 124
++I C+RT ++ + + ELK +T G A ++ ++ R LCVN V +
Sbjct: 178 QVILCSRTHSQLTQVIGELK-----RTVFGGSVANAEEQVAVAAVAGRAQLCVNPAVKSL 232
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKA----ASAAVLPPGVYTLQDL 180
+ ++ C + +A E I+ C + KA AA+ P ++DL
Sbjct: 233 GSAARINERCLDMSKG--KAKPGEKTKIKACPYLSKRRKAMLELKEAALAKP--MDIEDL 288
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
G+ CPY+ AR + A++V+ Y LL I+ +++ +VVVFDEAHN+
Sbjct: 289 AKLGESSRACPYYAARSALPEADLVLMPYASLLHADTREILGVKLEN-AVVVFDEAHNLV 347
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
+ + +V L L+ + +ERFK
Sbjct: 348 DAVHNSYGAAVTLNQLSDVNDMLT---EYVERFK 378
>gi|332858954|ref|XP_003317100.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan troglodytes]
gi|410301716|gb|JAA29458.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410341613|gb|JAA39753.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|308161158|gb|EFO63616.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia P15]
Length = 1060
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 24/270 (8%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL--------- 500
S+V+TSGTL+P L F +S++ CP +++ + L
Sbjct: 632 HSLVLTSGTLAPFSALQAELGL------PFNISVS----CPHIVSPSNYLLRAITAVTGT 681
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
P+ + R R G L V V G + FF SY YM +++ +W G E+
Sbjct: 682 PLLGTYTNRESKSYQRCLGYALQTCVRGVVGGTLVFFSSYKYMIQVLDSWKADGTEAELK 741
Query: 561 QH-----KLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRL 615
+ +F+E + + Y+ +CD GR + F + RGK+AEGIDF +Y R
Sbjct: 742 SDAHGDPRDLFVEPVRQHDCNAVIRKYKDSCDAGRSPILFVICRGKLAEGIDFSNNYCRC 801
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMM 675
++ +P+ +L ++++L +K D+ + A R Q +GRV+R K DYG M
Sbjct: 802 ALVISLPYPNISDPLLKIKMDWLDKHSVLKGSDWYSVHAYRTVNQALGRVLRHKDDYGCM 861
Query: 676 IFADKRYSRHDKRSKLPGWILSHLRDAHLN 705
D+RYS R +L W+ HL L+
Sbjct: 862 FLLDQRYSVEINRKQLSEWLAEHLVSVELS 891
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 33/279 (11%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-----ILAIG-LSSRKNLCVNSR 120
P K++Y RT ++E+ + +LK NY T G + I L SR+ C+N R
Sbjct: 144 PPKILYAARTHAQIEQAIRQLK---NYSTTISGASGNDKSSLFWPIAMLGSRRIFCINER 200
Query: 121 --VLAAENRDSVDAACRKRTAS-WVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
AA ++ AC+K R + + N + + Y S L L
Sbjct: 201 AHTYAAAANITLSMACKKICDDRQCRYYSNDRDNDNLAQKYREYYCENSNGRLD----DL 256
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+D + K++ CPY+L R +V A V+ Y Y+L K M + S+++ DE H
Sbjct: 257 EDFFGYCKKESRCPYYLGRALVPQARVITAPYNYILSSKSRTSELSSMLRNSILLVDEGH 316
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGN 297
NI C +A S SV L A+ + + + +E + + L L GN
Sbjct: 317 NIGQACCDAFSGSVTIDALLKASEEIQHLQKVVEVQRMGPGNK--------AATLELEGN 368
Query: 298 LPNAWLSN-----PALPSDILKEAVPGNIRRAEHFLHVL 331
WLSN PA+P L E IR++ L+ L
Sbjct: 369 ----WLSNINPYEPAIPYTGLSEPKTKLIRQSVERLYSL 403
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
+ K+E V FP++ YP Q YM L AL+ K + LLE PTGTGKT++LL
Sbjct: 4 MLKIEGVHFRFPFEP-YPSQMKYMSSLITALNKKENALLESPTGTGKTLSLL 54
>gi|194388328|dbj|BAG65548.1| unnamed protein product [Homo sapiens]
Length = 996
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 250 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 309
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 310 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 369
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 370 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 429
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 430 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 488
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 489 DHRFAFADARAQLPSWVRPHVR 510
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L I+Q
Sbjct: 3 YNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDVIDQ 58
Query: 269 EI-ERFKATDAGRLRAEYN 286
+ E+ KA G E++
Sbjct: 59 VLEEQTKAAQQGEPHPEFS 77
>gi|119595649|gb|EAW75243.1| hCG22751, isoform CRA_d [Homo sapiens]
Length = 1023
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|410219260|gb|JAA06849.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410263662|gb|JAA19797.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|223478945|ref|YP_002583205.1| DNA repair helicase Rad3 [Thermococcus sp. AM4]
gi|214034171|gb|EEB74997.1| DNA repair helicase Rad3 [Thermococcus sp. AM4]
Length = 640
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 172/719 (23%), Positives = 295/719 (41%), Gaps = 126/719 (17%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
Y PY P Q ++ ++ A++ + ++E PTG GKT+++L+ + E +K+
Sbjct: 6 YLPY-RPRPHQLEFIELVRDAVERGENAIIEAPTGFGKTVSVLAGVLPVA---KELGLKV 61
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + ELK ++ AK+ + + SRK LC++S L D+
Sbjct: 62 LYLARTHRQMDRVIEELKAING--------KAKVSGVEMRSRKELCLHS-YLREYTTDAY 112
Query: 131 DA--ACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ------DLRA 182
A C+ S C F+EN EK A + + L+ ++
Sbjct: 113 TAMVVCKNLRKSG------------KCPFYEN-EKKKKAELDELVNFFLETPASPVEVLN 159
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHNI 239
+ + CPY + R + A+V+V SY Y L+P + + + +V+FDEAHN+
Sbjct: 160 YSETLEICPYDVTRLVAYKADVIVASYLYALNPTIRENFLTYLDLDYSDLIVIFDEAHNL 219
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEY-----NRLVEGLA 293
+ I ALS + T+ A + + EI F + L Y NR VE
Sbjct: 220 PDQAISALSDRMSIHTVNRAIKEADEYREHEIANFLSIFGKGLEILYSEKLGNRDVE--- 276
Query: 294 LRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL----RRLVQYLRGRLETENVEK 349
P P I H ++VL R LV+ L + + +
Sbjct: 277 ----------ETPIAPELIFG-----------HLMNVLGLDTRWLVKTLNEMVAVGDAIR 315
Query: 350 EGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYT 409
E ++ ++ G + F L+L L + D++L + +
Sbjct: 316 EDRINKNKPPRSYIG---RVGEF-------LLLWLSLIGRDDYLFLL----------SRE 355
Query: 410 RGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL 469
+G S+ +L D S A+ + D QS + SGTL+P++ + ++
Sbjct: 356 KGLSL-----------------ELVALDPSRALSFIRD-VQSAIFMSGTLTPLEAFRDVM 397
Query: 470 NFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV 529
+ F + R+ +V VST+ + RS + R G +VE V ++
Sbjct: 398 GIEKARLKKFPRMVKRENAQVLVAK------DVSTRGEERSME-LYRKMGDYIVEAVRLI 450
Query: 530 PDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVV--ETTLALDNYRKACD 587
P + F SY + +++ N L+E K VFIE Q E L + ++
Sbjct: 451 PKNVGVFTASYEVLQGLLSA-NLQVRLEET--GKAVFIEKQGASSRENDLLVAQFKAHAR 507
Query: 588 CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG 647
G GAV V G+ +EG D+ VI+ G+P+ ++ A++ Y F K G
Sbjct: 508 SG-GAVLLGVMGGRNSEGQDYSGDEMNGVILVGIPYARPTPRV-QAQIRYFERKFPGK-G 564
Query: 648 DFLTF--DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
+ + A R+ Q GRV RS + G +I D R + R P W++ ++ L
Sbjct: 565 RYYGYYLPAHRKLVQAAGRVHRSAEEKGSIIILDYRVLWRNVRKDFPDWMVETMKPVDL 623
>gi|242814468|ref|XP_002486375.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714714|gb|EED14137.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 35/305 (11%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYP----RLLNFHPVVSRSFKMSLTRDCICPMV 492
D + + + D ++V++ GT+SP+ Y L+ + + SF + + +
Sbjct: 544 DPTNHFRDIVDEARAVILAGGTMSPMSDYADHLFSYLSSAKLDTFSFGHVIPPKNLTARI 603
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-- 550
L +G + FD R+ + + G+ + + +++PDG+V FF SY Y+++++ TW
Sbjct: 604 LAKGVLGNDFNFIFDQRTSDSMITDLGQTIANLCAVIPDGVVAFFPSYDYLNQVLNTWRK 663
Query: 551 ---NDSGILKEIMQHKLVFIETQDVVETTLALD---NYRKACDCGRGAVFFSVARGKVAE 604
I EI + K + E+ + + + D Y K + G GA+ SV G+++E
Sbjct: 664 PSKTGGSIFAEIEKRKPIVYESNNQKKESNTDDVLLEYSKKVESGSGALLLSVVGGRLSE 723
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTF-------------QIKEG--- 647
GI+F GR V++ G+PF S + A++ ++ + TF + +E
Sbjct: 724 GINFSDKLGRGVLIVGLPFPNIHSAVWKAKIGHIEKQTFAKLTQNESELPVSKRREAEIT 783
Query: 648 ------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
DF +R QC+GR IR + DY ++ D+RY + KLP WI L
Sbjct: 784 AKAAGRDFFENSCMRAVNQCIGRAIRHRNDYAAIVLIDRRYETQRIQEKLPAWIRQSLVS 843
Query: 702 AHLNL 706
+ N+
Sbjct: 844 STSNI 848
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 46 TGKTIALLSLITSYVLSKPE------NPVKLIYCTRTVHEMEKTLAELK----------L 89
+ T+ALL V E N ++ YC+RT ++ + EL+ L
Sbjct: 168 SASTVALLDRFKGRVTGSKESENDNENQTRIYYCSRTHSQLSQFAQELRRVTLPSSLPPL 227
Query: 90 LHNY---QTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
N Q H I + L SRK LC+N RVL N +++ C + S V A
Sbjct: 228 QENADAEQKEHAELEEVIKHLTLGSRKQLCINPRVLNLGNATAINERCMELQQSGVAA-- 285
Query: 147 AENPNIETCEF-----FENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
+ C + FE+ + VL V ++D+ GKQ CPY+ AR ++
Sbjct: 286 -----DKKCSYLPRKEFEDVQLDFRDRVLST-VQDIEDITQVGKQLSICPYYAARKVIDQ 339
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATR 261
++ Y LL + + ++ VV+ DEAHN+ + SVSV TL+
Sbjct: 340 CEIITLPYPLLLQRSSREALDLSL-RDHVVIIDEAHNLMDAISNIHSVSV---TLDQLRT 395
Query: 262 NLSRINQEIERFKATDAGRLR---AEYNRLVEGLA 293
+L ++ +F+ G+ R + RLV LA
Sbjct: 396 SLFQLTTYARKFQTRLKGKNRVYVTQVIRLVSALA 430
>gi|119595648|gb|EAW75242.1| hCG22751, isoform CRA_c [Homo sapiens]
Length = 784
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 38 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 97
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 98 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 157
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 158 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 217
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 218 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 276
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 277 DHRFAFADARAQLPSWVRPHVR 298
>gi|397477200|ref|XP_003809966.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Pan paniscus]
Length = 1401
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 145/322 (45%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 60 --------------------VLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGEVFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ +CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHSCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|410055436|ref|XP_003953846.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 1301
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 473 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 533 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 592
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 593 RSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 652
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 653 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 711
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 712 DHRFAFADARAQLPSWVRPHVR 733
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 67/322 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL+ N R K+ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 ELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQESNHLQIHLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E+ + L + ++DL G + CPY+L+R++ Q A+++
Sbjct: 170 -------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L
Sbjct: 223 FMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDV 278
Query: 266 INQEI-ERFKATDAGRLRAEYN 286
I+Q + E+ KA G E++
Sbjct: 279 IDQVLEEQTKAAQQGEPHPEFS 300
>gi|403351116|gb|EJY75039.1| putative: regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1087
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 24/316 (7%)
Query: 433 LSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM 491
L C + S A + + + + ++++ +SGTL+P+ Y L +F + L D +
Sbjct: 462 LWCFNPSFAFQSLLEEKPRNIIFSSGTLAPLHTYESEL------ETTFPIKLENDHVIDK 515
Query: 492 -------VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIV-PDGIVCFFVSYSYM 543
+LT D + F+ R D + + L + + V GI+ F SY+ +
Sbjct: 516 DSQVMVSILTHDIDNKQIQFSFEKREDLNFYLVFARTLARIFAKVHQGGILVFLPSYTVL 575
Query: 544 DEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVA 603
++ W D+ + K++ + +FIE QD V+ + ++Y++A + AVF +V RGK++
Sbjct: 576 KKLHKVWRDNKLYKDLFKQWDIFIEPQDQVKNSALFEDYKRAIQTQKRAVFIAVCRGKLS 635
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-----IKEGDFLTFDALRQA 658
EGIDF R VIM G+P+ ++ + +YL + I + A R
Sbjct: 636 EGIDFTDDVARCVIMAGIPYPQIYDPKVITKKDYLDRKYAQGKSIINGNQWYKLQACRAI 695
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 718
Q +GRVIR D+G +I D+RY H+ ++ W+ +LR N D+ + + F
Sbjct: 696 NQAIGRVIRHINDFGAIILMDERYVSHN--IEISKWL--NLRKKIYNQFVDLEVDLENFF 751
Query: 719 LRKMAQPYDKAGSIGR 734
++ P + I +
Sbjct: 752 IQNGCMPLNDIKDIQK 767
>gi|397477198|ref|XP_003809965.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan paniscus]
Length = 1090
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 497 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 556
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 557 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 616
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 617 RSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 676
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 677 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 735
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 736 DHRFAFADARAQLPSWVRPHVR 757
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 75/338 (22%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LNGVTVDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 60 --------------------VLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERAQGEVFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELKLLHNYQTRH----------------LGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
EL+ +Y++R L P + + L SR+ LC++ V E+
Sbjct: 125 ELRNT-SYRSRCRATLWVLETAPPRPTVLSPTRPKVCV-LGSREQLCIHPEVKKQESNHL 182
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW 189
+CRK+ AS +C F+ N E+ + L + ++DL G +
Sbjct: 183 QIHSCRKKVAS------------RSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRV 230
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CPY+L+R++ Q A+++ Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S
Sbjct: 231 CPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASF 289
Query: 250 SVRRQTLEGATRNLSRINQEI-ERFKATDAGRLRAEYN 286
+ L L I+Q + E+ KA G E++
Sbjct: 290 DLTPHDL---ASGLDVIDQVLEEQTKAAQQGEPHPEFS 324
>gi|157123196|ref|XP_001660054.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|108874458|gb|EAT38683.1| AAEL009438-PA [Aedes aegypti]
Length = 873
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 9/255 (3%)
Query: 450 QSVVITSGTLSPID-LYPRLLNFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+S+++ GT+ P++ L +L P V RS++ + D + P+ + +G + +
Sbjct: 592 RSIILAGGTMQPVEELTEQLFKTCPERVQIRSYRHVVPADAVLPLAIAKGPSGKELLFNY 651
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
R + + +L + +VP G+V FF SY Y+D+ + L ++ + K VF
Sbjct: 652 GNRQNKDLLNELSSVLANLCQVVPHGVVVFFSSYDYLDQFYRHLQQTDRLAKLEERKRVF 711
Query: 567 IETQDVVETTLALDNYRKAC----DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
E + + L +Y KA GA+ SV GK++EG++F GR V++ G+P
Sbjct: 712 REPRGSAQVDKILADYSKAARQWTGSQTGALMLSVVGGKLSEGLNFSDELGRCVVVVGLP 771
Query: 623 FQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 681
+ S L+ R+ YL T Q G ++ ++ QC+GR +R DY ++ D R
Sbjct: 772 YPNRTSPELVERMRYLDRTLQPPAGNEYYENLCMKAVNQCIGRAVRHIKDYASVVLLDVR 831
Query: 682 YSRHDK-RSKLPGWI 695
Y +K R KLP WI
Sbjct: 832 YGSSEKIRKKLPVWI 846
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAE 125
+PV++I+C+RT ++ + + E+ R +I ++SR+N C+N V
Sbjct: 197 HPVQVIFCSRTHSQLGQVVEEV--------RRTEFGKQIRLTTIASRQNFCINPEVRRLR 248
Query: 126 NRDSVDAACRK-RTASWVRALAAENPNI-------ETCEFFENYEKAASAAVLPPGVYTL 177
+ ++ C + + S + E+ N + C F Y + A + ++ +
Sbjct: 249 SNPLINERCLELQKKSGKATVVDEDQNARKKRKISQKCSF---YNRQAIEDLKNDSLFEV 305
Query: 178 QDLR---AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
QD+ F KQ+ CPY+ +R + + +++ YQ LL + ++ +V++ D
Sbjct: 306 QDIEELVTFAKQEKACPYYASRAAIPDSQLLMIPYQNLLHRRTREQTGIDISN-AVIIID 364
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQEIERFKATDA 278
EAHN+ + S V + L+ A T+NL +INQ + F AT
Sbjct: 365 EAHNLLDTISSIHSQEVTLEQLQQARLHLSAYKAKYFPRFSTKNLLKINQLL--FVATRL 422
Query: 279 GRL 281
G++
Sbjct: 423 GKV 425
>gi|194768579|ref|XP_001966389.1| GF22147 [Drosophila ananassae]
gi|190617153|gb|EDV32677.1| GF22147 [Drosophila ananassae]
Length = 875
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 8/259 (3%)
Query: 450 QSVVITSGTLSPID-LYPRLLNFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
++V++ GT+ P + L +L + + +V + + + + P V++ G + + F
Sbjct: 598 RAVIVAGGTMKPTEELKGQLFSCYQTRIVEHFYGHVVPDNAVLPFVVSHGPNGSALRFNF 657
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
RS+P + + +L +V ++P G+VCF SY Y++ + SG L+ I Q K +F
Sbjct: 658 LQRSNPAMLQELAMVLQNLVQVIPGGMVCFLPSYDYLEVVYRHLEKSGTLERISQRKKIF 717
Query: 567 IETQDVVETTLALDNYRKAC--DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
E + L++Y A GA+ SV GK++EG++F GR V++ G+P+
Sbjct: 718 REESGSADQL--LEDYASAVKDKSSGGALLLSVVGGKLSEGLNFTDDLGRAVLVVGLPYP 775
Query: 625 YTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
S L R+++L + G +F L+ QC+GR IR DY + D+RY
Sbjct: 776 NRKSLELQTRMQHLDQHLGSRAGEEFYENLCLKAVNQCIGRAIRHIGDYACVYLLDERYI 835
Query: 684 RHDKRSKLPGWILSHLRDA 702
+SKLP WI H+ +A
Sbjct: 836 WKKIQSKLPEWISKHIVEA 854
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 43/233 (18%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
V++ +C+RT ++ + +AE+K +T HL + + I + SR+ LC NS+V A ++
Sbjct: 189 VQIFFCSRTHSQLAQIMAEVK-----KTPHL---SWVRCISMGSRQQLCCNSQVRALKSV 240
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLR------ 181
++ C S RAL ++ P+ E S L G + ++ LR
Sbjct: 241 AMMNERCLDMITS--RALPSQ-PSTSKKIRITGKESKPSRCPL-KGQHLIESLRDLALSE 296
Query: 182 --------AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
A G G C Y+ +R + A++++ YQ LLD + + K S+V+
Sbjct: 297 PMDIEELAAEGTSTGACAYYASRAALSEAHLILLPYQLLLDKSAREQLGINL-KGSIVIV 355
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQEI 270
DEAHN+ + + + R +E A RNL +INQ I
Sbjct: 356 DEAHNLLDSVAQIHGAEITRSDMEFAQLEMINYRDFYKNRFSARNLLKINQLI 408
>gi|170089159|ref|XP_001875802.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649062|gb|EDR13304.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 19/287 (6%)
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRD 486
LQ + S V D ++V++ GT+SPI D+ +L + P V S S +
Sbjct: 543 LQYQLLNPSPTFTEVVDEARAVILAGGTMSPISDVVNQLFSHLPPTRVTSFSCGHIIPAI 602
Query: 487 CICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEI 546
+ +V+ +G + K + DP V G++L S+VP G++ FF SY +++
Sbjct: 603 NLQALVVCKGPRGGDLEFKAAQQGDPAVISELGQILFNFASLVPAGMIVFFPSYHFLNVA 662
Query: 547 IATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--------ACDCGR--GAVFFS 596
A W SG+L++ K F E ++ V+ L Y K + G+ GA+ F+
Sbjct: 663 KAAWTKSGMLEKFGLKKTTFFEPEESVDVEKVLQEYAKSITVCYQISSPTGKKGGALLFA 722
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD----FLTF 652
V K++EG++F R V++ G+PF S L R++Y++ + K GD
Sbjct: 723 VIGAKLSEGLNFADDLARAVVIVGLPFANLASPELRERMKYVK-RLEEKRGDAAAELYEN 781
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
+ Q +GR +R K D+ ++ D+RY+ R+KLP WI S L
Sbjct: 782 MCMNAVNQSIGRAVRHKGDWASLLLLDRRYATASIRNKLPKWIGSGL 828
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLL-----------HNYQTRHLGPAAKILAIGLSSRKNLC 116
K+ Y +RT ++ + L EL L H+ ++ + L SRK LC
Sbjct: 197 TKIYYASRTHSQLAQVLPELSRLKLRHSLSSVQNHHSESSQYPTPPSTRTVSLGSRKQLC 256
Query: 117 VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYT 176
+N L A++RD +D +CR+ P IE ++ A P +
Sbjct: 257 INDE-LRAKSRD-LDESCRELLGEKAEKRCQYLPRIEEDVKMLDFRDQILA--YPKDI-- 310
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
+DL G+ CPYF +R + A +V Y LL + ++ K+ +VV DEA
Sbjct: 311 -EDLATAGRHAHICPYFGSRRAIPQAELVTLPYNLLLQKSAREALGIDL-KDQIVVIDEA 368
Query: 237 HNI 239
HN+
Sbjct: 369 HNL 371
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE 65
FPYD Y Q M L +++ + ++E PTGTGKT++LL +++ + E
Sbjct: 14 FPYDPPYSIQVDLMRHLYTSIEQRAVTIVESPTGTGKTLSLLCAALTWLSDEKE 67
>gi|403335726|gb|EJY67043.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1454
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 16/275 (5%)
Query: 435 CHDASLAVKPVFD-RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVL 493
C + L + + + +S+++TSGTL P+ + + L + K ++++ +L
Sbjct: 540 CFNPGLGFQKIVNLNPRSLILTSGTLYPMSSFQKELMMDFPIKIENKHVISKEQASISIL 599
Query: 494 TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
T G + R + + G+ L+ + + P GI+ FF SY + ++ W S
Sbjct: 600 TNGVKGHEFNFAHKFRENEDQLDDLGETLLRITEVTPGGILIFFPSYQMLHKLYELWEHS 659
Query: 554 GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYG 613
G++K + + K V E +D + ++ ++ +GA+ F+V RGK++EG+DF
Sbjct: 660 GLIKRLERIKTVLQEPRDSSHYKYVITSFYQSV-YTKGAIIFAVCRGKISEGLDFSDDAA 718
Query: 614 RLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT------FDALRQAAQCVGRVIR 667
R VI+ G+P+ TL + + YL T D LT A R Q +GRVIR
Sbjct: 719 RCVIIIGIPYPMTLDPKTILKKHYLDKT----RNDGLTGHTWYQQQATRATNQAIGRVIR 774
Query: 668 SKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDA 702
DYG +I DKR+ H +R ++ W LRD+
Sbjct: 775 HVQDYGNIILIDKRFDNHTQRKQITNW----LRDS 805
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 30/230 (13%)
Query: 29 KRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS-KPENPV------KLIYCTRTVHEME 81
KR L+A LLE PTGTGKT+ LL+ +++ + N V K+IYC+RT ++
Sbjct: 125 KRGLNA----LLESPTGTGKTLCLLTAGLAWLKKIRESNEVDEKDLPKIIYCSRTHSQIS 180
Query: 82 KTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASW 141
+ + ELK H K+ IG SR LCVN V + S+++ C+K
Sbjct: 181 QVMNELK--------HTAYKPKVCLIG--SRDQLCVNPMVNTHKGM-SLNSLCKK----- 224
Query: 142 VRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQF 201
VR ++PN C FF+N + + G+ ++DL G + CPY+L + +++
Sbjct: 225 VREQRKDSPNC--CSFFKNTGDSVTPNGFEWGIQDVEDLHKLGTKNIVCPYYLQKSRIKY 282
Query: 202 ANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSV 251
A++++ Y YL+DPK+ + + S+++ DEAHN++ V + S +
Sbjct: 283 ADLILMPYNYLIDPKIRENFKVDYEN-SIIIMDEAHNVERVAEDVASFEI 331
>gi|410055438|ref|XP_003953847.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 997
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 250 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 309
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 310 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 369
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 370 RSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 429
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 430 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 488
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 489 DHRFAFADARAQLPSWVRPHVR 510
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 209 YQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQ 268
Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S + L L I+Q
Sbjct: 3 YNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDL---ASGLDVIDQ 58
Query: 269 EI-ERFKATDAGRLRAEYN 286
+ E+ KA G E++
Sbjct: 59 VLEEQTKAAQQGEPHPEFS 77
>gi|441639260|ref|XP_004090200.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Nomascus leucogenys]
Length = 1342
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 497 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 556
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 557 FSEECLSSLGKALGNIARVVPCGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 616
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 617 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 676
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
+ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 677 DHRXVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 735
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 736 DHRFAFADARAQLPSWVRPHIR 757
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 75/338 (22%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VT+ FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTIDFPF-QPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 54 --------------SLITSYVLSKPEN-------PV-------KLIYCTRTVHEMEKTLA 85
L LS N P+ K+IY +RT ++ + +
Sbjct: 65 DGISARKIAERVQGELFPDRALSSWGNAAAAAGDPIGXYTDIPKIIYASRTHSQLTQVIN 124
Query: 86 ELK----------LLHNYQTRHLGPA------AKILAIGLSSRKNLCVNSRVLAAENRDS 129
EL+ L +T GP K+ +G SR+ LC++ V E+
Sbjct: 125 ELRNTSYRSHCGTTLWLLETAPPGPTVLSPTRPKVCVLG--SREQLCIHPEVKKQESNHI 182
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGW 189
CRK+ AS +C F+ N E+ L + ++DL G +
Sbjct: 183 QIHLCRKKVAS------------RSCHFYNNVEEKGLEQELASPILDIEDLVKNGSKHRV 230
Query: 190 CPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSV 249
CPY+L+R++ Q A+++ Y YLLD K + ++ K +VV+FDEAHN++ +C E+ S
Sbjct: 231 CPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASF 289
Query: 250 SVRRQTLEGATRNLSRINQEI-ERFKATDAGRLRAEYN 286
+ L L I+Q + E+ K G+ E++
Sbjct: 290 DLTPHDL---ASGLDVIDQVLEEQTKMAQQGKPHPEFS 324
>gi|357454989|ref|XP_003597775.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486823|gb|AES68026.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1048
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 149/314 (47%), Gaps = 43/314 (13%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L C + +A++ D +S+++TSGTLSP+D + L + + + I
Sbjct: 416 TLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGPNQI 475
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ G ++ + R + G +V + IVPDG++ FF SY +++ I
Sbjct: 476 WAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYYLLEQSIG 535
Query: 549 TW----ND-SGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGK 601
W ND S I + I ++K IE ++ T ++ +Y + GAVFF+V RGK
Sbjct: 536 CWKSLSNDGSSIWERICKNKKPVIEPRESSMFTSSIKDYLTKLNDTTASGAVFFAVCRGK 595
Query: 602 VAEGIDFDRHYGRLVIMFGVPF--------------------------QYTLS-KILLAR 634
V+EG+DF H GR V++ G+P+ +Y S ++ +
Sbjct: 596 VSEGLDFADHAGRAVVVTGLPYATVTDPKSIAANSAAITAARCGAVLERYATSHSVVRLK 655
Query: 635 LEYLRDTFQIKEGDF--LTFD------ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
EYL + G F LT D A R Q VGRVIR + DYG +IF D+R+++
Sbjct: 656 REYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFTQPH 715
Query: 687 KRSKLPGWILSHLR 700
++S++ WI H++
Sbjct: 716 RQSQVSKWIQPHIK 729
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 62/281 (22%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+K+ + V FPY+ Y Q YM ++ ++L + + LLE PTGTGKT+ LL ++
Sbjct: 4 YKIRGIDVDFPYE-AYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAWRKS 62
Query: 60 -------------------VLSKPENP-----VKLIYCTRTVHEMEKTLAELKLLHNYQT 95
V S P ++Y +RT ++ + + ELK +Y+
Sbjct: 63 LGSFSTGMSIKTGDNGKTEVSSSQSEPGASKFPTIVYASRTHSQIRQVIQELKRT-SYR- 120
Query: 96 RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDA---ACRKRTASWVRALAAENPNI 152
P +L SR+ C++ V R +A ACR+R R
Sbjct: 121 ----PKMTVLG----SREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRR--------- 163
Query: 153 ETCEFFE---NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
C F +Y K P ++DL GK G CPY LA+ + + +++ Y
Sbjct: 164 --CNHFNQVLDYLKQNPNLGEEP--VDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPY 219
Query: 210 QYLLD--PKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
YL+D + A IS S+++FDEAHN++++C +A S
Sbjct: 220 NYLIDRGKRKALQIS---WSNSILIFDEAHNLESICADAAS 257
>gi|223997568|ref|XP_002288457.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975565|gb|EED93893.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 746
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 20/309 (6%)
Query: 435 CHDASLAVKPV-FDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVL 493
C +LA++ + F + +S++ITSGTLSP+ + L V + D I VL
Sbjct: 430 CFAPALAMRELSFLKVRSILITSGTLSPLPSFSLELGLDFPVQLENDHVIQSDQIFVRVL 489
Query: 494 TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM-----DEIIA 548
+G +S+KF R DP G L + +P G++ FF SYS M + +
Sbjct: 490 GKGVSGKELSSKFGRRDDPEYILELGNTLGSLCRNIPGGVLVFFPSYSAMYNCIENHFMT 549
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
T S K ++ K + IE + + + A+ +++ A G F + RGKV+EGI
Sbjct: 550 TSETSTPWKRLLTRKAIVIEPRSTSDLSDAIAEFKRFIALPKSPGCFLFGICRGKVSEGI 609
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE-----------GDFLTFDAL 655
DF R V++ G+PF L + + E+L D + E ++ A
Sbjct: 610 DFSDDMCRAVVVTGLPFAPYLDPKVKLKREFL-DAARASEKARPVPSTLSGAEWYNQQAH 668
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 715
R Q +GRVIR + DYG ++ D R+++ R L WI +LRD + +T +
Sbjct: 669 RAVNQAIGRVIRHRNDYGAVLLLDHRFAQQSNRDGLSKWIRPYLRDETVGTATRGLVQFY 728
Query: 716 REFLRKMAQ 724
+E +K +
Sbjct: 729 KESKQKAGE 737
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 50/305 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
+ ++ V+FP+ Y Q YM + AL + H LLE PTGTGKT+ LL
Sbjct: 1 INNLQVHFPF-RPYDVQTQYMKSVLNALQSSNHALLESPTGTGKTLCLLCSALAWQQGEK 59
Query: 54 -SLITSYVLS-----KPEN--------------------PVKLIYCTRTVHEMEKTLAEL 87
+ TS V++ +P PV +IY +RT ++ + + EL
Sbjct: 60 AKIRTSGVIATAPTVQPTGGDLSQNDGDGNAPALRTNKLPV-IIYASRTHSQLSQVVREL 118
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
K Y+ +H A+ L SR+++CV+ +V + A ++S V
Sbjct: 119 KNTR-YRPKH--------AV-LGSREHMCVHPKVNPLVAKAKSSANAAPVSSSEVNHGCN 168
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+ C F N ++ + V ++DL GKQ CP++ R +++ A ++
Sbjct: 169 KLNKERKCMFRNNLDEVLAGGEYEQPVLDMEDLVTVGKQYKVCPFYHTRSLIKDAELIFV 228
Query: 208 SYQYLLDPKVAGIISKEMQ-KESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRI 266
Y YL D E+ +V++FDEAHN++ E+ S + + G + R
Sbjct: 229 PYNYLFDRDARESTLAEVDFANAVLIFDEAHNLEEFASESSSFDLSSSDIAGCVGEVQRA 288
Query: 267 NQEIE 271
Q +E
Sbjct: 289 IQYLE 293
>gi|258566511|ref|XP_002584000.1| hypothetical protein UREG_06967 [Uncinocarpus reesii 1704]
gi|237907701|gb|EEP82102.1| hypothetical protein UREG_06967 [Uncinocarpus reesii 1704]
Length = 593
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSL 483
D +L+ D + + V + ++V++ GT+SP+ D L ++ P + + S+ +
Sbjct: 275 DILLKYMLLDPTEHFREVVEEARAVILAGGTMSPMTDYSDHLFSYLPPEKLRTFSYGHVI 334
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
+ + ++RG F+ R + + G+ +VEM ++PDG+V FF SY ++
Sbjct: 335 PTENLTARPISRGIGNTEFDFTFEKRKSSDMMLDLGQTIVEMCKVIPDGVVAFFPSYKFL 394
Query: 544 DEIIATWN--DSG-----ILKEIMQHKLVFIETQDV-VETTLALDNYRKACDCGRGAVFF 595
+++ W SG I++ I K + E+Q+ L Y D G+GA+
Sbjct: 395 QQVLEAWKYFPSGSTGPKIIETIGLLKPLLYESQEENTNIEELLRKYTNLIDEGKGALLL 454
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL---------------RD 640
SV GK++EGI+F GR VI+ G+PF S A+++Y+ R
Sbjct: 455 SVMGGKLSEGINFSDRLGRGVIVIGLPFPNVRSAQWEAKMKYVEHRAYEKAAGPEGSRRS 514
Query: 641 TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
++ +F +R QC+GR IR + DY + D+RY +SKLP WI L
Sbjct: 515 QAKLASREFYENACMRVVNQCIGRAIRHQQDYAAIFMLDRRYETQRIQSKLPLWIRQSLT 574
Query: 701 DA 702
A
Sbjct: 575 PA 576
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAA-----V 169
+C+N +V + N +++ C V P + C F + E ++ V
Sbjct: 1 MCINQKVRSLGNATAINERCLDLQRPGV-------PPDQKCPFAPSQENESAINDFRDHV 53
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
L V ++D+ G++ G CPY+ R ++ + +V Y LL + + K+
Sbjct: 54 LAK-VQDIEDIGKIGERMGICPYYATRSVIGHSEIVTLPYPLLLQKSAREALDISL-KDH 111
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYN 286
V++ DEAHN+ +V SV++ + L+ A L ++ +++K G+ R A+
Sbjct: 112 VIIIDEAHNLMDVIANIHSVTISLKQLQTA---LEQVTVYAKKYKTRLKGKNRVYIAQVM 168
Query: 287 RLVEGL 292
RL+ +
Sbjct: 169 RLIASI 174
>gi|119595652|gb|EAW75246.1| hCG22751, isoform CRA_f [Homo sapiens]
Length = 865
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+S+++TSGTL+P+ + + V + + I V+ RG D +S+ FD R
Sbjct: 38 RSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 97
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W + +++ K +F+E
Sbjct: 98 FSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEP 157
Query: 570 QDVVETTLALDNY--RKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y R A GA F +V RGK +EG+DF GR VI+ G+P+ +
Sbjct: 158 RSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRM 217
Query: 628 SKILLARLEYLRDTFQIKEGDFLTF---------DALRQAAQCVGRVIRSKADYGMMIFA 678
++ ++++L D + + G F A R Q +GRVIR + DYG +
Sbjct: 218 DPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLC 276
Query: 679 DKRYSRHDKRSKLPGWILSHLR 700
D R++ D R++LP W+ H+R
Sbjct: 277 DHRFAFADARAQLPSWVRPHVR 298
>gi|307202440|gb|EFN81860.1| Fanconi anemia group J protein [Harpegnathos saltator]
Length = 293
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 26/284 (9%)
Query: 431 LQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP 490
L+L C + ++ +P+ +SV++ SGTL+P +F + F L + I P
Sbjct: 2 LKLVCMNPAVVFEPLSRITRSVILASGTLAPTS------SFESELGTRFPHKLHANHIIP 55
Query: 491 M------VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ RG + + + + GKL+V++ +P G++CFF SYS M+
Sbjct: 56 REQVYVRCIPRGPNGESLLANYKNVNSWSFQDELGKLIVQVCDAIPYGVLCFFSSYSAMN 115
Query: 545 EIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYR--------KACDCGRGAVFFS 596
+I W D GI ++ + K +F+E ++ E + YR K+ GA+ F+
Sbjct: 116 KIHMRWKDIGIWAKLAELKEIFVEPKENRELPEIMREYREVIKESSSKSFRERSGAILFA 175
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK----EGDFLTF 652
V RGKVAEGIDF + R V+ G+PF ++ + +A + D+ K ++ T
Sbjct: 176 VFRGKVAEGIDFSDNEARCVLTVGIPFT-SIKNVAVAMKKDYNDSNMSKGLLSGSEWYTI 234
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSK-LPGWI 695
+A R Q +GR IR D+G ++ D+R+ + K + LP WI
Sbjct: 235 NAFRALNQALGRCIRHINDWGAVLLVDERFLQRPKNADYLPKWI 278
>gi|327306237|ref|XP_003237810.1| DNA helicase [Trichophyton rubrum CBS 118892]
gi|326460808|gb|EGD86261.1| DNA helicase [Trichophyton rubrum CBS 118892]
Length = 290
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 31/272 (11%)
Query: 463 DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYG 519
D LL++ P + + ++ + +D + + + RG D + FD R + + G
Sbjct: 3 DYVNHLLSYVPREKIKTFTYGHVIPKDNLMAIPIDRGMDGTEFNFTFDQRRSEKMIISLG 62
Query: 520 KLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-NDSGILKEIMQHKLVFIETQDV------ 572
+ + S++PDG+V FF SY Y+ ++ W + SGIL + + K +F E Q
Sbjct: 63 RTIARYCSVIPDGVVVFFPSYDYLATVLKVWASSSGILNSLSRLKPIFHEPQSTGTTKDS 122
Query: 573 ----VETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 628
T L Y D G+G + SV GK++EGI+F GR VI+ G+PF T +
Sbjct: 123 ANANTNTDSLLSQYSAFVDAGKGGLLLSVMGGKLSEGINFSDALGRGVIVVGLPFPNTRN 182
Query: 629 KILLARLEYL-RDTFQIKEGD----------------FLTFDALRQAAQCVGRVIRSKAD 671
I A+L+++ + +++ + + +R QC+GR IR K D
Sbjct: 183 VIWQAKLQHVEKKAYELADSSRSEDERRACGKAASRAYYENTCMRTVNQCIGRAIRHKGD 242
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLRDAH 703
Y ++ D+RY + KLP WI L +H
Sbjct: 243 YAAILMIDRRYQTERIQGKLPRWIRGSLLKSH 274
>gi|357455003|ref|XP_003597782.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486830|gb|AES68033.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1089
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 149/314 (47%), Gaps = 43/314 (13%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
L C + +A++ D +S+++TSGTLSP+D + L + + + I
Sbjct: 457 TLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGPNQI 516
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V+ G ++ + R + G +V + IVPDG++ FF SY +++ I
Sbjct: 517 WAGVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYYLLEQSIG 576
Query: 549 TW----ND-SGILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGK 601
W ND S I + I ++K IE ++ T ++ +Y + GAVFF+V RGK
Sbjct: 577 CWKSLSNDGSSIWERICKNKKPVIEPRESSMFTSSIKDYLTKLNDTTASGAVFFAVCRGK 636
Query: 602 VAEGIDFDRHYGRLVIMFGVPF--------------------------QYTLS-KILLAR 634
V+EG+DF H GR V++ G+P+ +Y S ++ +
Sbjct: 637 VSEGLDFADHAGRAVVVTGLPYATVTDPKSIAANSAAITAARCGAVLERYATSHSVVRLK 696
Query: 635 LEYLRDTFQIKEGDF--LTFD------ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHD 686
EYL + G F LT D A R Q VGRVIR + DYG +IF D+R+++
Sbjct: 697 REYLDQQSGAQGGSFKVLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFTQPH 756
Query: 687 KRSKLPGWILSHLR 700
++S++ WI H++
Sbjct: 757 RQSQVSKWIQPHIK 770
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 62/281 (22%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+K+ + V FPY+ Y Q YM ++ ++L + + LLE PTGTGKT+ LL ++
Sbjct: 45 YKIRGIDVDFPYE-AYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAWRKS 103
Query: 60 -------------------VLSKPENP-----VKLIYCTRTVHEMEKTLAELKLLHNYQT 95
V S P ++Y +RT ++ + + ELK +Y+
Sbjct: 104 LGSFSTGMSIKTGDNGKTEVSSSQSEPGASKFPTIVYASRTHSQIRQVIQELKRT-SYR- 161
Query: 96 RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDA---ACRKRTASWVRALAAENPNI 152
P +L SR+ C++ V R +A ACR+R R
Sbjct: 162 ----PKMTVLG----SREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRR--------- 204
Query: 153 ETCEFFE---NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSY 209
C F +Y K P ++DL GK G CPY LA+ + + +++ Y
Sbjct: 205 --CNHFNQVLDYLKQNPNLGEEP--VDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPY 260
Query: 210 QYLLD--PKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
YL+D + A IS S+++FDEAHN++++C +A S
Sbjct: 261 NYLIDRGKRKALQIS---WSNSILIFDEAHNLESICADAAS 298
>gi|431894622|gb|ELK04422.1| Regulator of telomere elongation helicase 1 [Pteropus alecto]
Length = 1198
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 11/285 (3%)
Query: 427 PDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR 485
P VL C +++ V +++++TSGTL+P+ + + VS + +
Sbjct: 460 PGKVLSYWCFSPGYSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVSLENPHVIDK 519
Query: 486 DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
I ++ +G D +S+ FD R + GK L + +VP G++ FF SY M++
Sbjct: 520 HQIWVGIVPKGPDGTQLSSAFDKRFSDECLSSLGKALGNIARVVPHGLLVFFPSYPVMEK 579
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGRGAVFFSVARGKVA 603
+ W ++ K +F+E + + + Y + RGA F +V RGK +
Sbjct: 580 SLEFWRARDFASKLEALKPLFVEPRSKAGFSEVIGAYYTSVIRPGSRGAAFLAVCRGKAS 639
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE--GDFLTF-DALRQAA- 659
EG+DF GR V++ G+P+ ++ ++++L + E G FL+ D RQ A
Sbjct: 640 EGLDFADMNGRGVVVTGLPYPPRKDPRVILKMQFLDEMKGRSEAKGQFLSGQDWYRQQAS 699
Query: 660 ----QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG+++ D R++ D R++LP W+ H++
Sbjct: 700 RAVNQAIGRVIRHRHDYGVVLLCDHRFACADARAQLPSWVRPHVK 744
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 67/285 (23%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY----- 59
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ LL ++
Sbjct: 6 LNGVTVDFPF-QPYKCQEEYMAKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWREHLR 64
Query: 60 -VLSK------------PENPV--------------------KLIYCTRTVHEMEKTLAE 86
LS P+ P+ K+IY +RT ++ + ++E
Sbjct: 65 DALSAHKIAERAQGELFPDRPLSSWGSAASDRDAPACYADIPKVIYASRTHSQLTQVISE 124
Query: 87 LKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALA 146
L+ N R ++ +G SR+ LC++ V E+ CRK+ AS
Sbjct: 125 LR---NTAYR-----PRVCVLG--SREQLCIHPEVKKQESSHMQIHLCRKKVAS------ 168
Query: 147 AENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
+C F+ N E+ + L + ++DL G + CPY+LAR++ Q A++V
Sbjct: 169 ------RSCHFYNNVEEKSLEQELATPILDIEDLVKSGNKHRLCPYYLARNLKQQADIVF 222
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI-----DNVCIEA 246
Y YLLD K S ++ K +VV+FDEAHN+ + VC+ +
Sbjct: 223 MPYNYLLDAKSRRAHSIDL-KGTVVIFDEAHNVPPAPRNTVCLRS 266
>gi|448096961|ref|XP_004198556.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359379978|emb|CCE82219.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 131/281 (46%), Gaps = 22/281 (7%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------ 490
D S + + + + +++ GT+ P++ Y + L P V + D I P
Sbjct: 520 DPSEIFRDIVSKCRCLILCGGTMEPMEDYKKYL--FPYVPNESIKKFSCDHIIPDKNLIV 577
Query: 491 -MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
+ T G+ S ++ R D + N G ++ ++ G V FF SY Y++E+ A
Sbjct: 578 FPIGTYGNSVFEFS--YEKRGDLNMILNLGNVITQICENTKGGAVVFFPSYRYLNEVKAQ 635
Query: 550 WNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRG-AVFFSVARGKVAEGIDF 608
W GIL+ I + V+ E D + L++YR + + G A+ F+V GK++EGI+F
Sbjct: 636 WRIHGILRSIEDRRTVYYEPIDSADVAQILNSYRTSIESDNGLAIIFAVVGGKLSEGINF 695
Query: 609 DRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD----------FLTFDALRQA 658
R VIM G+P+ S L+AR E++ T + G+ F +R
Sbjct: 696 ADDLARAVIMVGMPYPNVTSADLIARKEFIEKTILEENGNVKDARTASKTFYDNLCMRAV 755
Query: 659 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
Q +GR IR K D ++ D+RY +SKL GW+ L
Sbjct: 756 NQSIGRSIRHKDDSSLIYLIDQRYGYETVQSKLSGWVKKRL 796
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P K+I+ +RT ++ + +L L N+ G +I + L+SRK LC++ R+
Sbjct: 194 ECPNKIIFSSRTHSQLSQFAHQLGLT-NFNPTFEGIPERIKFVPLASRKQLCIHPRISHL 252
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY---EKAASAAVLPPGVYTLQDLR 181
+ DS++ AC + + E C F + K + + ++ ++DL
Sbjct: 253 TSLDSINEAC----------IDLQQNTKEGCAFNPKHGSMSKKKFSDLSFTKIHDIEDLG 302
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
+ G CPY+ R+ ++ A V+ YQ LL ++ +++ ++++V DEAHN+ +
Sbjct: 303 SLGTGLRVCPYYSVRNGLKSAEVIASPYQILLQKSARETLNVDVE-DAIIVIDEAHNLID 361
Query: 242 VCIEALSVSVRRQTLE 257
I SVS+ +E
Sbjct: 362 TIISLYSVSINLLEIE 377
>gi|4140689|gb|AAD04165.1| putative DNA helicase homolog [Gracilaria gracilis]
Length = 128
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 74/103 (71%)
Query: 623 FQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
FQYT S++L ARL +L + +QI+E DFL FDA+RQAAQC GRVIR+K DYG++IFADKR+
Sbjct: 1 FQYTESRVLKARLRFLAEKYQIREDDFLVFDAMRQAAQCAGRVIRNKNDYGIVIFADKRF 60
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQP 725
+R RSKLP WI L L+L A+ AR FL MAQP
Sbjct: 61 TRAKLRSKLPKWIAQFLSVDSLDLDLGTAIAEARTFLLDMAQP 103
>gi|428672406|gb|EKX73320.1| conserved hypothetical protein [Babesia equi]
Length = 822
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 158/685 (23%), Positives = 280/685 (40%), Gaps = 93/685 (13%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+++I C+RT ++ + ++E R L K+ I + R +C+N +V
Sbjct: 158 LQVIICSRTFSQLNQYVSEF--------RRLNSKYKLGII--AGRFQVCINEKVRRCSTA 207
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQ 187
+ ++ CR+ +C + ++ ++ + + P ++++ GK
Sbjct: 208 EELNEECRR----------------TSCAYRKDVKELRESILAYP--LDIEEVVQIGKDM 249
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEAL 247
CPY+ V ++++ Y +L+ V + ++ K +++VFDE HN+ + EA
Sbjct: 250 YACPYYAGVKNVAHMDIILVPYVSILNDSVRESLGIDL-KGNIIVFDEGHNLSDAIEEAQ 308
Query: 248 SVSVRRQTLEGATRN----LSRINQEIERFKATDAGRLRAEYNRLVEGLALRG------- 296
SV + + L+ L + I++ T+ RL E +EG A +
Sbjct: 309 SVRISLKELQDLNMECKGYLKKFASTIQK-DETEVLRLMIEMLNTLEGHANKQKTVDNTH 367
Query: 297 NLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGR--------LETENVE 348
N + + S+ S I+ ++ + + +E+F + + L GR LE N
Sbjct: 368 NNNDEFASSKEPDSLIVNSSLSKHEKTSENFSNPRQGLGGNFNGRGNVRSDSNLENLNTT 427
Query: 349 KEGPVSFV-----ASITAHAGID-------QKTLRFCYERL-HSLMLTLEITDTDEFLHI 395
SF+ I H +D + R ERL H++ L+I++ + +
Sbjct: 428 CMTISSFIIEFGLQDIKFHTILDFLASSDFTRRFRGYVERLKHAVEKNLDISNKKDNMKT 487
Query: 396 QTICDFATL---------------VGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASL 440
+ TL V G SI IE F +
Sbjct: 488 VSTLAIYTLRAFIQALLSSNSNDRVIITRTGCSIEIEIFSLFAGKFLSSYSHTFTDENFH 547
Query: 441 AVKPVFDRFQSVVITSGTLSPIDLYPRLL--NFHPVVSRSFKM-SLTRDCICPMVLTRGS 497
+ SV++ SGTLSPI+ + RL+ N ++ S + L R ++ R +
Sbjct: 548 KTASLVSEAHSVLVMSGTLSPIEEFLRLVPPNMSALIHTSPPVFPLNR--FFASIIDRDN 605
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
D + + R+ KLL + SIVP+GIVCFF SY ++ + + +S
Sbjct: 606 DGNELKFDYTSRTRDMELTYLCKLLDLISSIVPNGIVCFFSSYKFLKQFRSFLENSRFRI 665
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
IM K +F E Q D Y K RGA+ F V G+ +EG++F RLV+
Sbjct: 666 SIMSRKRLFFEEQG---HGSVFDEYSKTA-LERGAILFGVFGGRQSEGVNFSDGLARLVL 721
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEGDFL--TFDALRQAAQCVGRVIRSKADYGMM 675
+ G+P+ K+ L R +DT L T + QC+GR +R + D+ +
Sbjct: 722 LVGLPYPPDSIKLALKR----QDTGNHSGPPHLDRTLLCYKNVNQCIGRAMRHRMDFAAV 777
Query: 676 IFADKRYSRHDKRSKLPGWILSHLR 700
+ D RY D + L G++ LR
Sbjct: 778 LLLDSRYRGKDAKY-LSGYVQESLR 801
>gi|322801298|gb|EFZ21985.1| hypothetical protein SINV_11349 [Solenopsis invicta]
Length = 908
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 13/257 (5%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPM------VLTRGSDQLPVS 503
+SVV+ GT+ P+ + L + M+ + D + P V+ RG +
Sbjct: 625 RSVVLAGGTMEPMSEFIDQLFLMAGATSDRIMTFSCDHVIPKENIISNVVMRGPTGVEFE 684
Query: 504 TKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHK 563
F R D + G+ L+ + ++VP GIV FF SY+Y D + + SGI+ +I K
Sbjct: 685 FNFHNRQDTRLLDELGRALLNLCNVVPAGIVAFFPSYNYEDTVFKHLDKSGIITKISAKK 744
Query: 564 LVFIETQDVVETTLALDNYRKACDCGR----GAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
++ E + + LD Y + + GA+ FSV GK++EG++F GR VI+
Sbjct: 745 CIYREPKSASQVNTILDQYAHSIKNSQSPCNGALLFSVVGGKLSEGLNFSDDLGRCVIVI 804
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
G+P+ S L +++YL + + G F ++ QC+GR +R DY ++
Sbjct: 805 GLPYPNIKSPELQEKMKYLNEHVKPDAGSSFYENSCMKAVNQCIGRSVRHINDYSTVVLL 864
Query: 679 DKRYSRHDKRSKLPGWI 695
DKRY K LP WI
Sbjct: 865 DKRYCH--KVKVLPQWI 879
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 112 RKNLCVNSRVLAAENRDSVDAAC----RKRTASWVRALAAENPNIETCEFFENYEKAASA 167
R+N C+N V ++ + ++ C RK+T ++ C F +K A
Sbjct: 265 RQNYCINKSVKRLKHINLINEICLQLQRKKTTVKKEKGLKKSKTTRGCPFIPGDQKLLMA 324
Query: 168 AVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQK 227
+L + ++++ G++ CPY+ +R VQ +++ Y +L + ++ K
Sbjct: 325 EILS-NIQDVEEIMERGQENNTCPYYSSRKSVQNGQLILVPYNSILHKNTRTSLGIDL-K 382
Query: 228 ESVVVFDEAHNI 239
+V++ DEAHN+
Sbjct: 383 GNVLIIDEAHNL 394
>gi|195397135|ref|XP_002057184.1| GJ16955 [Drosophila virilis]
gi|194146951|gb|EDW62670.1| GJ16955 [Drosophila virilis]
Length = 799
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 10/265 (3%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+ ++++I GT+ P +L +L P VV R + + D + P VL G
Sbjct: 513 IVSEARALIIAGGTMQPTHELTAQLFAHCPERVVQRFYSHVVPADAVQPFVLPTGPTGAK 572
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ + R+ P + + +L + ++P G+VCF SY Y+D + SG L+ + Q
Sbjct: 573 LCFNYAQRASPAMLQELSMVLQNLCGVLPAGVVCFLPSYDYLDTVYGHLEQSGALQRLGQ 632
Query: 562 HKLVFIETQDVVETTLA-----LDNYRKAC-DCGRGAVFFSVARGKVAEGIDFDRHYGRL 615
K +F ET + L Y A GA+ SV GK++EG++F GR
Sbjct: 633 RKRIFRETAGSGSGGVGGVEQLLQQYADAIGQNAGGALLLSVVGGKLSEGLNFADDLGRG 692
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGM 674
VI+ G+P+ + L R+ +L +T G ++ ++ QC+GR +R DY
Sbjct: 693 VIVVGMPYPNRTAPELKERMRHLDETLGSGAGNEYYENLCMKAVNQCIGRSVRHIRDYAC 752
Query: 675 MIFADKRYSRHDKRSKLPGWILSHL 699
+ D+RY+ + KLP WI H+
Sbjct: 753 VYLLDERYASARIQQKLPAWIAQHI 777
>gi|297609925|ref|NP_001063870.2| Os09g0551800 [Oryza sativa Japonica Group]
gi|255679120|dbj|BAF25784.2| Os09g0551800 [Oryza sativa Japonica Group]
Length = 1187
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 157/711 (22%), Positives = 286/711 (40%), Gaps = 165/711 (23%)
Query: 2 IFKLEDVTVYFPYDNIYPEQYSYMLELKRALD-----AKGHCLLEMPTGTGKTIALLSLI 56
++++ V V FPY Y Q ++M + LD + H LLE PTGTGK+++LL
Sbjct: 24 VYQVGGVPVEFPY-KPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSA 82
Query: 57 TSYVLSKP--------------------------------------ENPVKLIYCTRTVH 78
++ P +N + Y TRT
Sbjct: 83 LAWQRHYPLRAPPAAAPDPFLHGGGFVPDDTQKQATPGVPEKATRKKNVPTIYYATRTHA 142
Query: 79 EMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRT 138
++ + + E + +Y+ R +AI L+SRK+ CVN V + N +D C+
Sbjct: 143 QITQVVREYRKT-SYRVR--------MAI-LASRKHYCVNKNVCMSGN---IDELCK--- 186
Query: 139 ASWVRALAAENPNIETCEFFENYEKAASAAVLPPG----VYTLQDLRAFGKQQGWCPYFL 194
+ + + + C ++N +K + L G V+ ++DL G++ CPYF
Sbjct: 187 -------SLLDDSAQGCPEYKNAQKLSRHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFA 239
Query: 195 ARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQ 254
A+ M + A +V Y YL+ P V + ++ + S++V DEAHNI+++ +A S V +
Sbjct: 240 AQTMAEAAQLVFCPYNYLISPIVRRAMDIDI-RGSIIVLDEAHNIEDIARDAGSFDVDEE 298
Query: 255 TLEGATRNLSRINQEIERFKATDA-GRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDIL 313
+ L + QE+E +A ++ + +++GL N W+
Sbjct: 299 S-------LLFLRQELEGLVTDEAVAKIYEPLHEVIQGL-------NGWIDE-------- 336
Query: 314 KEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEG--PVSF-----VASITAHAGID 366
GN + F H + G + ++ G PV+F A+ A D
Sbjct: 337 ----QGNNLQKNEFEHP----ASFWTGEEAMKELKYAGITPVNFPVLQECATKAIKAASD 388
Query: 367 QKTLRFCYERLH---SLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERM 423
++ E +H +TLE ++ F G ++ + + ++ F +R
Sbjct: 389 AES-----EGVHLSGGSAMTLESL-------FSSLSYFFAENGRHSNDYQLALQRFAKRE 436
Query: 424 PHIPDP------VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR 477
+ V+ L C + ++ + + D SV++TSGTLSP+ + L
Sbjct: 437 GNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQFEACM 496
Query: 478 SFKMSLTRDC-ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCF 536
+ D + VL+ G ++ + ++ G L E+ +VP G + F
Sbjct: 497 EAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEICRVVPGGALVF 556
Query: 537 FVSYSYMDEIIATWNDSGILKEIMQHKLVFIE---------------------------- 568
F SY+ ++++ W+ +G + K V +E
Sbjct: 557 FPSYNLLEKLQRRWSQTGQWARLEAQKHVCVEPRGSTEELEPVLKGYYNAILGKAPPKKG 616
Query: 569 ---TQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV 616
+ +V+ + D+ +++ GA F +V RGKV+EGIDF R+V
Sbjct: 617 RGGAKQIVKNRVTKDSSQESAK--GGAAFLAVCRGKVSEGIDFSDDKARVV 665
>gi|322706322|gb|EFY97903.1| DEAD-2 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 924
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 56/311 (18%)
Query: 441 AVKPVFDRFQSVVITSGTLSPID-----LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTR 495
A + ++V++ GT+SP D L+P L + V + S + R+ +C LT
Sbjct: 585 AFSSIVSSARAVILAGGTMSPFDDYKNHLFPALAD-PKVTTLSCGHVIPRENLCVWTLT- 642
Query: 496 GSDQLPVSTKFDM----RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
P + F+ R D + + G ++ + S+VPDG+V FF SY Y++E++A W+
Sbjct: 643 --GTRPGGSSFEFSYQRRGDSEMVKELGLAILNICSVVPDGVVVFFPSYGYLEEVVAAWS 700
Query: 552 ---------DSGILKEIMQHKLVFIET---------QDVVETTLALDNYRKACDCGR-GA 592
+ I + K+VF ET Q+ + L G+ GA
Sbjct: 701 RRAPGDKNPQTTIWDRLQTRKMVFRETKGCSSDEVLQEYSQAILGNGGSTTGLVKGKGGA 760
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT----------- 641
+ SV GK++EGI+F GR V++ G+P+ S A+++Y+ T
Sbjct: 761 LLLSVVGGKMSEGINFSDRLGRCVMVVGLPYPNIASPEWKAKMDYIESTTLANLQDSRRD 820
Query: 642 -------------FQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 688
+ DF +R Q +GR IR K DY ++ AD+RY+ +
Sbjct: 821 AGPKLTKDEAAARAKQAARDFYENACMRAVNQSIGRAIRHKGDYAAIVLADRRYATERIQ 880
Query: 689 SKLPGWILSHL 699
KLPGWI S +
Sbjct: 881 GKLPGWIRSGM 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 21/239 (8%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELK-------LLHNYQTRHLGPAAKILAIGLSSRKNLCV 117
E VK+ Y +RT ++ + + EL+ L + + + + LSSR+ LC+
Sbjct: 235 EEEVKIYYTSRTHSQLSQFITELRRPKFPSSLPTSLAEKKSSVEETVKLLPLSSRQRLCI 294
Query: 118 NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
N V + +++ C + S P E + +A A V +
Sbjct: 295 NPSVARLGSVQAINDRCAELQQSKSTKKCPYVPKEELLSQTHQFRDSALATV-----PDI 349
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL GK CPY+ +R + A ++ Y LL + +++ +VV+ DEAH
Sbjct: 350 EDLHQLGKSLAVCPYYASRSALPGAEIITLPYPLLLQRSAREALGIKLEG-NVVIIDEAH 408
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLS----RINQEIERFKATDAGRLRAEYNRLVEGL 292
N+ + + ++ L L R ++++ + GR+ R+++GL
Sbjct: 409 NVMDAVANVHAAEIKLSDLHKGRGMLGIYVKRFGKKLKGVNRVNVGRV----GRVIDGL 463
>gi|110669569|ref|YP_659380.1| DNA repair helicase-like protein [Haloquadratum walsbyi DSM 16790]
gi|109627316|emb|CAJ53806.1| DNA repair helicase Rad3 [Haloquadratum walsbyi DSM 16790]
Length = 731
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 167/731 (22%), Positives = 296/731 (40%), Gaps = 117/731 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
+FPY+ YP Q+S M E+ ALD + L E GTGKT++ L +Y K
Sbjct: 10 FFPYEEPYPNQHSAMSEIAEALDEQRDVLFEGAPGTGKTLSALCPAIAYARQTD----KT 65
Query: 71 IYCTRTVHE-MEKTLAELK-LLHN----------------------YQT-RHLGPAAKIL 105
+ T VH+ M + +A+ + ++H+ YQ + L + L
Sbjct: 66 VVITTNVHQQMRQFVADARAIVHSGIDTIRAVVFKGKSSMCHIDVGYQECQTLRDTTRSL 125
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTA--SWVRALAAENPNIET---CEFFEN 160
R L + L E R+ D A R+A + ++ +E ++ + CE++ N
Sbjct: 126 VDKERERTQLREQATALLDEIREGNDGAASARSAVTDELESVTSEIEDLSSGNICEYYRN 185
Query: 161 YEKAASAAV-----LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP 215
A A L V T +++ A+ +Q+ C Y L + ++ ++V+ +Y +LLDP
Sbjct: 186 NLTEADATEAFFQWLFDDVRTAEEIYAYAEQRQLCGYELLKEGIEGVDLVICNYHHLLDP 245
Query: 216 KVAGIISKEMQKES---VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIER 272
+ + + ++ V +FDEAHNI++ + ++ TLE A L+ I ++ E
Sbjct: 246 AIREQFFRWLGRDPDDIVTIFDEAHNIESAARDHAGRTLTENTLEEA---LTEI-KDCED 301
Query: 273 FKATDAGRLRAEYNRLVE-------GLALRGNLPNAW----LSNPALPSDILKEAVPGNI 321
+A A + + ++ G R + + W ++N D+ E +
Sbjct: 302 SRAEPAANVFEAFLTALQTTYADAFGFGEREQVTSEWYDLTVANTDRRDDLTLEFLQQYE 361
Query: 322 RRA-EHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSL 380
R + + + R+L + + R ET A+ + T + C +
Sbjct: 362 GRGIDTEIDLARQLAESIDSRYET----------------AYKNGETATRKECQALHAAT 405
Query: 381 MLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASL 440
L +TD+D VGT+ +I DE + +C ++
Sbjct: 406 FLNAWMTDSD-------------TVGTH----PLISVRRDETTNEVYARAELYTCIPRAV 448
Query: 441 AVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
+FD + V+ S TL P D+ +L V +++++ P R L
Sbjct: 449 TAD-LFDEVHASVLMSATLRPFDVAEDVLGLSNPVQMAYELAY------PAENRR---TL 498
Query: 501 PVSTKF---DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
V T R+DP L + P + FF SY+ E AT
Sbjct: 499 AVKTPALFSSARNDPDTQSIIADTLADAARFTPGNTLFFFPSYAEA-ERYAT-------- 549
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
++ QH V + E+ + R++ G V + G +AEG+ FD + R V
Sbjct: 550 QLRQHDAVSKPVM-LDESGTETEPLRQSFVGQNGCVLCTSLWGTLAEGVSFDDNDARTVA 608
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEGDF---LTFDALRQAAQCVGRVIRSKADYGM 674
+ GVP+ + + + Y R K+ + + +R+ Q +GRVIRS +DYG+
Sbjct: 609 VVGVPYPHLSERAEAVQSAYDRAYSGRKDAGWRYGIEIPTIRKTRQALGRVIRSPSDYGV 668
Query: 675 MIFADKRYSRH 685
+ DKRY++
Sbjct: 669 RLLIDKRYTQE 679
>gi|125983388|ref|XP_001355459.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
gi|54643775|gb|EAL32518.1| GA10980 [Drosophila pseudoobscura pseudoobscura]
Length = 861
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 7/260 (2%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+ +++VI GT+ P +L +L P +V R + + D + P V+ +G
Sbjct: 582 ILSEARAIVIAGGTMQPTQELKEQLFARCPERLVERFYSHVVPPDAVLPFVVAKGPTGAS 641
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ + R P + + +L + +++P G+VCF SY Y+D + SG L+ I +
Sbjct: 642 LCFSYAQRGTPAMLKELSMVLQNLCNVLPGGVVCFLPSYEYLDTVHTHLEQSGGLQNIAR 701
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
K +F E+ + L Y +A + GA+ +V GK++EG++F GR V++ G
Sbjct: 702 KKRIFRESSGAADQL--LQQYAEAIAVPKGGALLLAVVGGKLSEGLNFADDLGRAVLVVG 759
Query: 621 VPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
+P+ + L R+ YL + G ++ ++ QC+GR +R DY + D
Sbjct: 760 LPYPNRNAPELQQRMRYLDERLGSGAGNEYYENICMKAVNQCIGRSVRHIRDYACVFLLD 819
Query: 680 KRYSRHDKRSKLPGWILSHL 699
+RY+ R KLP WI H+
Sbjct: 820 ERYASARIREKLPEWIARHI 839
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
PV++ +C+RT ++ + +AEL+ +T H A + + L SR+ LC+N +V N
Sbjct: 193 PVQIFFCSRTHSQLAQIVAELR-----KTPH---GAWVRCVSLGSRQQLCINPQVRKLRN 244
Query: 127 RDSVDAACRKRTASWVRA-------LAAENP-NIETCEFFE--NYEKAASAAVLPPGVYT 176
++ C S A LAAE+ ++ C F E A+ P
Sbjct: 245 VGLINERCLDMARSKAPANPSKKSRLAAESAASLSRCPFKAPAKVESLRDVALCEP--LD 302
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
+++L G G C Y+ +R A +V+ YQ LL + ++ + SVV+ DEA
Sbjct: 303 IEELAVEGTACGGCSYYASRSAQDDAQLVLLPYQLLLQRSARQQLGIDL-RGSVVIVDEA 361
Query: 237 HNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQ 268
HN+ + + + R LE A TRNL INQ
Sbjct: 362 HNLLDSIAQLHGSELTRSQLELAREQVSGYKLQYARRLSTRNLLSINQ 409
>gi|195162259|ref|XP_002021973.1| GL14395 [Drosophila persimilis]
gi|194103871|gb|EDW25914.1| GL14395 [Drosophila persimilis]
Length = 861
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 7/260 (2%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHP--VVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+ +++VI GT+ P +L +L P +V R + + D + P V+ +G
Sbjct: 582 ILSEARAIVIAGGTMQPTQELKEQLFARCPERLVERFYSHVVPPDAVLPFVVAKGPTGAS 641
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ + R P + + +L + +++P G+VCF SY Y+D + SG L+ I +
Sbjct: 642 LCFSYAQRGTPAMLKELSMVLQNLCNVLPGGVVCFLPSYEYLDTVHTHLEQSGGLQNIAR 701
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGR-GAVFFSVARGKVAEGIDFDRHYGRLVIMFG 620
K +F E+ + L Y +A + GA+ +V GK++EG++F GR V++ G
Sbjct: 702 KKRIFRESSGAADQL--LQQYAEAIAVPKGGALLLAVVGGKLSEGLNFADDLGRAVLVVG 759
Query: 621 VPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
+P+ + L R+ YL + G ++ ++ QC+GR +R DY + D
Sbjct: 760 LPYPNRNAPELQQRMRYLDERLGSGAGNEYYENICMKAVNQCIGRSVRHIRDYACVFLLD 819
Query: 680 KRYSRHDKRSKLPGWILSHL 699
+RY+ R KLP WI H+
Sbjct: 820 ERYASARIREKLPEWIARHI 839
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 53/236 (22%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
PV++ +C+RT ++ + +AEL+ +T H A + + L SR+ LC+N +V N
Sbjct: 193 PVQIFFCSRTHSQLAQIVAELR-----KTPH---GAWVRCVSLGSRQQLCINPQVRKLRN 244
Query: 127 RDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVL-------PPGVYTLQD 179
++ C R+ A NP+ ++ A SAA L P V +L+D
Sbjct: 245 VGLINERC----LDMARSKAPANPSKKS------RLAAGSAASLSRCPFKAPAKVESLRD 294
Query: 180 -----------LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
L G G C Y+ +R A +V+ YQ LL + ++ +
Sbjct: 295 VALCEPLDIEELAVEGTACGGCSYYASRSAQDDAQLVLLPYQLLLQRSARQQLGIDL-RG 353
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGA----------------TRNLSRINQ 268
SVV+ DEAHN+ + + + R LE A TRNL INQ
Sbjct: 354 SVVIVDEAHNLLDSIAQLHGSELTRSQLELARDQVSGYKLQYARRLSTRNLLSINQ 409
>gi|390462826|ref|XP_002747823.2| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Callithrix jacchus]
Length = 1823
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 427 PDPVLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTR 485
P VL C +++ V +++++TSGTL+P+ + + V + +
Sbjct: 582 PGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDK 641
Query: 486 DCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDE 545
I V+ RG D +S+ FD R + GK L + +VP G++ FF SY M++
Sbjct: 642 HQIWVGVVPRGPDGAQLSSAFDRRYSEECLSSLGKALGNIARVVPYGLLVFFPSYPVMEK 701
Query: 546 IIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNY--RKACDCGRGAVFFSVARGKVA 603
+ W ++I K +F+E + + + Y R GA F +V RGK +
Sbjct: 702 SLEFWRARDFARKIEALKPLFVEPRSKGSFSETISAYYERVTSPGSTGAAFLAVCRGKAS 761
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTF---------DA 654
EG+DF GR VI+ G+P+ + ++ ++++L D + + G F A
Sbjct: 762 EGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMKGQGGAGGQFLSGQEWYRQQA 820
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
R Q +GRVIR + DYG + D R++ D R++LP W+ H+R
Sbjct: 821 SRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVR 866
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 174 VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVF 233
+ ++DL G + CPY+L+R++ Q A+++ Y YLLD K S ++ K +VV+
Sbjct: 324 ILDIEDLVKSGSRHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHSIDL-KGTVVIL 382
Query: 234 DEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYN 286
DEAHN++ +C E+ S + Q L + R+ + E+ KA G E++
Sbjct: 383 DEAHNVEKICEESASFDLTPQDLASGLDVIDRVLE--EQTKAAQQGEPHPEFS 433
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 51/162 (31%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIAL------------ 52
L VTV FP+ Y Q YM ++ L K + +LE PTGTGKT+ L
Sbjct: 6 LNGVTVDFPF-KPYKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLR 64
Query: 53 ---------------------LSLITSYVLSKPENPV-------KLIYCTRTVHEMEKTL 84
LS S + +P+ K+IY +RT ++ + +
Sbjct: 65 DTISARKIAERLQGELFPDRALSSWGSAAAAADGDPIACYTDVPKIIYASRTHSQLTQVI 124
Query: 85 AELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
+EL+ N R K+ +G SR+ LC++ V E+
Sbjct: 125 SELR---NTSYR-----PKVCVLG--SREQLCIHPEVKKQES 156
>gi|111493941|gb|AAI05579.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 142/283 (50%), Gaps = 13/283 (4%)
Query: 430 VLQLSCHDASLAVKP-VFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCI 488
VL C S +++ V +++++TSGTL+P+ + + V + ++ +
Sbjct: 452 VLSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQL 511
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
++ RG D + +S+ +D R + GK L + +VP G++ FF SY M++ +
Sbjct: 512 WVGIVPRGPDGVQLSSAYDKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLE 571
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGI 606
W G+ +++ K +F+E ++ + +D Y + A GA +V RGK +EG+
Sbjct: 572 FWQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATLLAVCRGKASEGL 631
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG---------DFLTFDALRQ 657
D GR VI+ G+P+ + ++ ++++L D + + G ++ A R
Sbjct: 632 DSSDMNGRGVIVTGLPYPPRMDPRVVLKMQFL-DEMRGRSGVGGQCLSGQEWYQQQASRA 690
Query: 658 AAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
Q +GRVIR + DYG + D R++ D R++LP W+ +L+
Sbjct: 691 VNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLK 733
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPF-QPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVETKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|320034910|gb|EFW16853.1| ATP-dependent RNA helicase [Coccidioides posadasii str. Silveira]
Length = 905
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 27/302 (8%)
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNF-HPVVSRSFKMS--L 483
D +L+ + D + + + ++V++ GT+SP+ D L ++ P R+F +
Sbjct: 579 DVLLKYTLLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLAPGQLRTFSYGHVI 638
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
+ ++RG F+ R+ + + GK + E+ PDG+V FF SY ++
Sbjct: 639 PTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVAFFPSYDFL 698
Query: 544 DEIIATW----NDSG---ILKEIMQHKLVFIETQDVVETTLAL-DNYRKACDCGRGAVFF 595
++++ W ++SG IL + K + E+++ T AL Y D G+GA+
Sbjct: 699 NQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAMNTEALLQKYANFIDEGKGALLL 758
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEG------- 647
SV GK++EGI+F GR VI+ G+PF S A+++Y+ R T++ G
Sbjct: 759 SVMGGKLSEGINFSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERKTYERSSGGEETRRS 818
Query: 648 -------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
DF +R QC+GR IR + DY ++ D+RY +SKLP WI L
Sbjct: 819 KAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTARIQSKLPEWIRRSLV 878
Query: 701 DA 702
A
Sbjct: 879 SA 880
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 58/299 (19%)
Query: 31 ALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK----PENPVKLIYCTRTVHEMEKTLAE 86
A DAKG+ L + TIALL ++ + ENPVK+ YC+RT ++ + E
Sbjct: 203 AHDAKGNSDL-----SATTIALLEKLSGSAKIQDDFEEENPVKIFYCSRTHSQLAQFARE 257
Query: 87 LKLL-----------------HNYQTRH----LGPAAKILAIGLSSRKNLCVNSRVLAAE 125
L+ + RH L K +++G SRK +C+N ++
Sbjct: 258 LRRVAFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG--SRKTMCINPKIRRLG 315
Query: 126 NRDSVDAACRKRTASWVRALAAENPNI---ETCEFFENYEKAASAA-----VLPPGVYTL 177
N +++ C L ++ N+ C F + E + + VL V+ +
Sbjct: 316 NATAINERC----------LDLQSSNVLPEHKCPFAPSKENELAISDFRDHVLAE-VHDI 364
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+D+ G++ G CPY+ +R ++ + +V YQ LL + + K+ V++ DEAH
Sbjct: 365 EDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISL-KDHVIIIDEAH 423
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLVEGLA 293
N+ +V SV+V +L L ++ ++KA G+ R A+ RL+ +A
Sbjct: 424 NLMDVIANIHSVNV---SLTQLRIGLEQLTIYARKYKARLKGKNRVYVAQVMRLLGSIA 479
>gi|303310525|ref|XP_003065274.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240104936|gb|EER23129.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 864
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 27/302 (8%)
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNF-HPVVSRSFKMS--L 483
D +L+ + D + + + ++V++ GT+SP+ D L ++ P R+F +
Sbjct: 538 DVLLKYTLLDPTAHFREAVEEARAVILAGGTMSPMSDYRDHLFSYLAPGQLRTFSYGHVI 597
Query: 484 TRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYM 543
+ ++RG F+ R+ + + GK + E+ PDG+V FF SY ++
Sbjct: 598 PTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVAFFPSYDFL 657
Query: 544 DEIIATW----NDSG---ILKEIMQHKLVFIETQDVVETTLAL-DNYRKACDCGRGAVFF 595
++++ W ++SG IL + K + E+++ T AL Y D G+GA+
Sbjct: 658 NQVVEIWKQPCSNSGNPSILDSLGLVKPLLYESKEKAMNTEALLQKYANFIDEGKGALLL 717
Query: 596 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEG------- 647
SV GK++EGI+F GR VI+ G+PF S A+++Y+ R T++ G
Sbjct: 718 SVMGGKLSEGINFSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERKTYERSSGGEETRRS 777
Query: 648 -------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
DF +R QC+GR IR + DY ++ D+RY +SKLP WI L
Sbjct: 778 KAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTARIQSKLPEWIRRSLV 837
Query: 701 DA 702
A
Sbjct: 838 SA 839
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 52/254 (20%)
Query: 31 ALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK----PENPVKLIYCTRTVHEMEKTLAE 86
A DAKG+ L + TIALL ++ + ENPVK+ YC+RT ++ + E
Sbjct: 162 AHDAKGNSDL-----SATTIALLEKLSGSAKIQDDFEEENPVKIFYCSRTHSQLAQFARE 216
Query: 87 LKLL-----------------HNYQTRH----LGPAAKILAIGLSSRKNLCVNSRVLAAE 125
L+ + RH L K +++G SRK +C+N ++
Sbjct: 217 LRRVAFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG--SRKTMCINPKIRRLG 274
Query: 126 NRDSVDAACRKRTASWVRALAAENPNI---ETCEFFENYEKAASAA-----VLPPGVYTL 177
N +++ C L ++ N+ C F + E + + VL V+ +
Sbjct: 275 NATAINERC----------LDLQSSNVLPEHKCPFAPSKENELAISDFRDHVLAE-VHDI 323
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+D+ G++ G CPY+ +R ++ + +V YQ LL + + K+ V++ DEAH
Sbjct: 324 EDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISL-KDHVIIIDEAH 382
Query: 238 NIDNVCIEALSVSV 251
N+ +V SV+V
Sbjct: 383 NLMDVIANIHSVNV 396
>gi|403369956|gb|EJY84835.1| Isoform 4 of Regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1415
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 158/340 (46%), Gaps = 28/340 (8%)
Query: 431 LQLSCHDASLAVKPVFDRF-QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
L C +A + + + + +S+++TSGTLSP++ + L ++ + +
Sbjct: 726 LSFWCFNAGIGFREIQELLPRSIILTSGTLSPLNSFQAELQIQFNQRLENPHVISPEQVS 785
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
+LT+G + + F+ R + + G + + + P G++ FF SY M
Sbjct: 786 INILTKGVRESLFNFSFNNRDNENTMVDLGMSIASIAQVTPGGMLVFFPSYRVMQRCEEV 845
Query: 550 WNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKA------CDCGRGAVFFSVARGKVA 603
WN+ + + I +HK +++E +D + +D Y K+ D GA+ V RG+++
Sbjct: 846 WNNQKVRQHIEKHKKLYMEPKDPSQYQTTMDLYYKSIFSPKPTDKTNGAILMGVCRGRIS 905
Query: 604 EGIDFDRHYGRLVIMFGVPF-QYTLSKILLARLEYLRDTFQ------------IKEGDFL 650
EG+DF + R VI+ G+P+ Q T ++++L + +YL + D+
Sbjct: 906 EGLDFSDNAARCVIVVGIPYPQMTDARVILKK-DYLDKRLNQQSRNKNNQYPPLSGKDWY 964
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDM 710
+ A R Q +GRVIR DYG +I D+RY+ R ++ W+ ++ H N +DM
Sbjct: 965 SQQATRSVNQAIGRVIRHVQDYGSIILIDERYNWGTMRGQVSKWLRDRIK-LH-NKCSDM 1022
Query: 711 ALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLEKMTNDG 750
+ + F +M G + L Q +E T DG
Sbjct: 1023 QNEM-KSFFEEMK----TKGFKAKVEQLGQLQIELETEDG 1057
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 42/289 (14%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
F+ + TVYFP+ Y Q +M ++ + L+ + LLE PTGTGKT++LL +++
Sbjct: 280 FQTDGHTVYFPF-KPYSCQVDFMSKVIKGLNQNENALLESPTGTGKTLSLLCASLAWLKL 338
Query: 63 KPE-------NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
+ E + ++IY +RT ++ + EL+ A ++ L SR +L
Sbjct: 339 QREKVGIQSGDVPRIIYTSRTHSQLAQVQKELR----------NTAYNPRSVILGSRDHL 388
Query: 116 CVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVY 175
CV+ + ++++ AC+K + I+ C F +N + A + P Y
Sbjct: 389 CVHPEIKLLRG-NALNLACQKAQKA-----------IDPCIFGKNRDIALTKLSWEP--Y 434
Query: 176 TLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
+++L + +CPYF ++ +Q A+V+ Y YL+D K+ K S+++FDE
Sbjct: 435 DIEELHEIATKMIFCPYFASKDRMQGADVIFMPYNYLIDDKIRENFDINY-KGSIIIFDE 493
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
AHN + + S + + LE + E E K D RLR +
Sbjct: 494 AHNASSTAEDVASFELNTKLLEQS---------EFELQKLQDERRLRGD 533
>gi|121704642|ref|XP_001270584.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
gi|206558082|sp|A1CJ34.1|CHL1_ASPCL RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119398730|gb|EAW09158.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
Length = 731
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 27/286 (9%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSR----SFKMSLTRDCICPMV 492
D + + + + ++V++ GT+SP+ Y L + SR S+ + + +
Sbjct: 415 DPTNHFREIVEDARAVILAGGTMSPMSDYMNHLFPYVPASRLDTFSYGHVIPPENLVAHT 474
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN- 551
L +G ++ R + + G+ + + +PDG+V FF SY Y+ I+ W
Sbjct: 475 LAQGVMGCAFDFTYESRDSEKMIIDLGRTVATLCQAIPDGVVAFFPSYDYLSRILHIWKK 534
Query: 552 ------DSGILKEIMQHKLVFIETQDVV-ETTLALDNYRKACDCGRGAVFFSVARGKVAE 604
+ IL I + K + E++D+ ++ L Y + D G GA+ SV GK++E
Sbjct: 535 PLGADKNQTILGLIERKKPILYESRDMTTKSDDILQEYTRTIDSGSGALLLSVIGGKLSE 594
Query: 605 GIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-RDTFQIKEG--------------DF 649
GI+F GR V++ G+PF S + A+L+Y+ + + G DF
Sbjct: 595 GINFSDRLGRGVLIIGLPFPNIRSAVWQAKLQYVEQKAYSGSSGSETDRQMIAKAAGRDF 654
Query: 650 LTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+R QC+GR IR + DY ++ D+RY + + + KLP WI
Sbjct: 655 YENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYDKPNIQGKLPAWI 700
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 32/244 (13%)
Query: 69 KLIYCTRTVHEMEKTLAEL----------KLLHNYQTRHLGPAAKILAIGLSSRKNLCVN 118
K+ YC+RT ++ + +EL K L T ++ + L SRKNLC+N
Sbjct: 76 KIFYCSRTHSQLAQFASELRRVEMPPSLPKELSEKLTDSEALEERVKHLSLGSRKNLCIN 135
Query: 119 SRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL- 177
RV+ EN +++ C +A E+ C + + K VL +TL
Sbjct: 136 PRVMKLENATAINERCMDLQQP---GMAVEH----RCPYLPS--KDDEPQVLQFRDHTLA 186
Query: 178 -----QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVV 232
+D+ GK G CPY+ +R +++ + +V Y LL + + K +V+
Sbjct: 187 TVKDIEDMGKLGKHIGVCPYYASRSVIKHSEIVTLPYPLLLQRSAREALGLSI-KNHIVI 245
Query: 233 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR---AEYNRLV 289
DEAHN+ + SV++ L+ A L+ + +FK G+ R A+ RLV
Sbjct: 246 IDEAHNLMDAISNIHSVTITLSQLQTAIFQLTTYAR---KFKTRLKGKNRTYIAQVIRLV 302
Query: 290 EGLA 293
+A
Sbjct: 303 SSVA 306
>gi|443709796|gb|ELU04301.1| hypothetical protein CAPTEDRAFT_175213 [Capitella teleta]
Length = 875
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVS---RSFKMS--LTRDCICP 490
+ S+ + ++V++ GT+ P+ D +L V R F + + P
Sbjct: 573 NPSVHFSEIIREARAVILAGGTMQPVNDFKEQLFKAAGVPEQRIREFSCGHVIPPKQLLP 632
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
+ L RGS + + R P + G+++ + ++ P G+VCFF SY + A W
Sbjct: 633 IALARGSSGTELDFTYQKRDQPQMMSELGRVIYNVCNLTPGGVVCFFPSYELERTVHAYW 692
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC--------DCGRGAVFFSVARGKV 602
G L ++ K +F E + + L Y AC GAV F V GK+
Sbjct: 693 EKEGFLNKMAAKKKIFREPRKSNQVDRILREY-SACIERHASGGTSITGAVMFCVVGGKM 751
Query: 603 AEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF-QIKEGDF---LTFDAL--R 656
+EGI+F + R V+M G+P+ S L ++EYL T + +G L ++ L +
Sbjct: 752 SEGINFSDNLCRCVVMVGLPYPNIRSPELKEKMEYLNATMPRTPDGQTPGQLHYENLCMK 811
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
Q +GR IR +ADY ++ D+RY + + +SKLP WI HL++
Sbjct: 812 AVNQSIGRAIRHQADYAAILLLDQRYLKANVQSKLPSWICKHLQN 856
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E K+ YC+RT ++ + + E++ ++ HL I L SR+N C+N V
Sbjct: 194 EQITKIFYCSRTHSQLTQFVREVQKSPFGESTHL--------ISLGSRQNTCINEAVKRL 245
Query: 125 ENRDSVDAAC--RKRTASWVRALAAENPNIET----CEFFENYEKAASAAVLPPGVYTLQ 178
+ ++ C +R+ S R E + T C F Y++ + + + +Q
Sbjct: 246 SSLSLINDRCLEMQRSKSEKRNKDGEKSSKMTKQCGCPF---YKQDSLHLLKDRALIDVQ 302
Query: 179 DLRAF---GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDE 235
D+ GKQ CPY+ +R V A +VV YQ LL ++ K VV+ DE
Sbjct: 303 DIEQLVTQGKQTKACPYYSSRLAVPAAQIVVLPYQMLLHKSTRESCGVKL-KGQVVIIDE 361
Query: 236 AHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEI-ERFKATDAGRLR 282
AHN+ S SV L A LS+ + R KA + +R
Sbjct: 362 AHNLLETISNIHSTSVNGLQLTCAYSQLSQYQERYHNRLKAKNLMYIR 409
>gi|428173412|gb|EKX42314.1| hypothetical protein GUITHDRAFT_141266 [Guillardia theta CCMP2712]
Length = 864
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 132/313 (42%), Gaps = 50/313 (15%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLL--NFHPVVSRSFKMS--LTRDCICPMV 492
+AS K + + SVV+ GT+ P+ Y + L + P R+ + + ++ I P+
Sbjct: 520 NASTHFKEILQQAHSVVLAGGTMQPMAEYVQQLMPSIQPSRFRTLSVGHVIPKENILPLT 579
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
++ G L + RSDP G+L+V + + PDGIV F SYSY +E+ W
Sbjct: 580 VSTGPTGLKFDFRHGTRSDPTQKSEIGRLIVNICGLTPDGIVVFLPSYSYEEELWTYWTT 639
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYR-------------KACDCG---------- 589
G++ +I + K +F E + E L Y K C
Sbjct: 640 EGLVDKIAKKKKIFREPRSSGEVEAVLRQYEECIRTQGTENTSPKDSSCMVDTRILNRVT 699
Query: 590 -----RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQI 644
GA+ V GK++EGI+F GR VI+ G+PF LL +++Y+ +
Sbjct: 700 DRFPVTGAILLCVVGGKLSEGINFSDELGRCVIVVGLPFANRGDPRLLEKIKYVESLPPV 759
Query: 645 --------KEGDFLTFDALRQA----------AQCVGRVIRSKADYGMMIFADKRYSRHD 686
K LT QA QC+GR IR ADY ++ D RY +
Sbjct: 760 TELVGEDSKSSPTLTGAKAGQAYYQNMCMKAVNQCIGRAIRHIADYAAILLVDSRYEGSN 819
Query: 687 KRSKLPGWILSHL 699
R K+ WI L
Sbjct: 820 VRCKITSWIRDKL 832
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 60 VLSKPENP---------VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLS 110
+ KPEN K+IYC+RT ++ + + E+K + A+ L+
Sbjct: 177 LFQKPENEDRLEDEYDVRKVIYCSRTHSQLSQFMNEVKRTQW--------GKDLKAVSLA 228
Query: 111 SRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIE-------------TCEF 157
SRK +C+N +V + ++ ++AAC + + NIE C F
Sbjct: 229 SRKGMCINPKVSSLKSSTRINAAC----LDLQKGVEDTESNIEDAPSALKAKKKKSNCPF 284
Query: 158 FENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
++ + ++ V ++D+ GK+ CPY+ +R ++ A +V Y L+
Sbjct: 285 YDQDRQLDLRDMILARVQDIEDIVENGKKVQCCPYYASRAAIRAAELVTIPYTSLVHKAT 344
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVS 250
+ +++ +VV+ DEAHN+ IEA++ +
Sbjct: 345 REALGLKLEG-NVVIIDEAHNL----IEAVTTT 372
>gi|355717481|gb|AES05950.1| regulator of telomere elongation helicase 1 [Mustela putorius furo]
Length = 1114
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 10/261 (3%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+SV++TSGTL+P+ + V +++ I ++ +G D +S+ FD R
Sbjct: 391 RSVILTSGTLAPVSSLALEMQIPFPVCLENPHVISKQQIWVGIVPKGPDGAQLSSAFDKR 450
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+ GK L + +VP G++ FF SY M++ + W +++ K VF+E
Sbjct: 451 FSDVCLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAHDFARKLEALKPVFVEP 510
Query: 570 QDVVETTLALDNYRK--ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 627
+ + + Y K A GA F +V RGK +EG+DF GR VI+ G+P+
Sbjct: 511 RSKGGFSEVVGAYYKQVAAPGSSGASFLAVCRGKASEGLDFADMNGRGVIVTGLPYPPRT 570
Query: 628 SKILLARLEYLRD--TFQIKEGDFLTF------DALRQAAQCVGRVIRSKADYGMMIFAD 679
++ ++++L + + G L+ A R Q +GRVIR + DYG + D
Sbjct: 571 DPRVVLKMQFLDELKSLGGPGGQLLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCD 630
Query: 680 KRYSRHDKRSKLPGWILSHLR 700
R+++ D R++LP W+ H++
Sbjct: 631 HRFTQPDARAQLPSWVRPHVK 651
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRD 128
K++Y +RT ++ + + EL RH ++ +G SR+ LC++ V E+
Sbjct: 27 KIVYASRTHSQLTQAIGEL--------RHTSYRPRVCVLG--SREQLCIHPEVKKQESSH 76
Query: 129 SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQG 188
CRK+ AS +C F+ N E+ + L + ++DL G +
Sbjct: 77 MQIHLCRKKVAS------------RSCHFYNNVEEKSLERELATTILDIEDLVRSGNKHS 124
Query: 189 WCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
CPY+L+R++ Q A+++ Y YLLD K ++ K +VV+FDEAHN++ +C E S
Sbjct: 125 LCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHGIDL-KGTVVIFDEAHNVEKMCEETAS 183
Query: 249 VSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYN 286
+ L L ++ + E+ KA G L +++
Sbjct: 184 FDLTPHDLASGLDVLDQLLE--EQTKAAQQGELHVDFS 219
>gi|150863715|ref|XP_001382279.2| YPL008W (CHL1)-like protein [Scheffersomyces stipitis CBS 6054]
gi|206558237|sp|A3LN13.2|CHL1_PICST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|149384971|gb|ABN64250.2| syntenic [Scheffersomyces stipitis CBS 6054]
Length = 835
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 18/298 (6%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVL--- 493
D S K + + + V++ GT+ P+ + L F V + K I P L
Sbjct: 532 DPSSVFKDIVSKARCVILCGGTMEPMSEFKNFL-FPYVEDKKIKSFSCNHIIPPDNLKVY 590
Query: 494 -TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
+ + + FD R++P + G +V + VPDG+V FF SY YM+ I++ W
Sbjct: 591 PVSSQNNVTLEFSFDNRNNPLMIEALGASIVRICQSVPDGVVVFFPSYKYMNHILSIWKS 650
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYRKAC-DCGRGAVFFSVARGKVAEGIDFDRH 611
+ +L +I K +F E + L +Y + +GA+ FSV GK++EGI+F
Sbjct: 651 TDVLTQIESQKKLFEEPTSASQVQTILADYANTIKEEKKGAILFSVVGGKMSEGINFADE 710
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLR----------DTFQIKEGDFLTFDALRQAAQC 661
GR V+M G+P+ S ++A+ +++ Q + +R Q
Sbjct: 711 LGRAVVMVGLPYPNAYSGEIIAKRKFIESEAIARGCSMSEAQRNSQSYYENLCMRAVNQS 770
Query: 662 VGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFL 719
+GR IR DY ++ D RY ++KL W+ + + N+ D + R+F
Sbjct: 771 IGRSIRHINDYSIIYLVDCRYQSSRIQNKLSSWVRKRIETRNYNM--DQIMEETRDFF 826
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAEN 126
PV + + +RT H A L +Q+ G + + + SRK LC+N +V +
Sbjct: 203 PVNIYFSSRT-HSQLNQFAHQLALTKFQSSFKGVEERTKYLPIGSRKQLCINEKVKSFSK 261
Query: 127 RDS-VDAACRKRTASWVRALAAENPNIETCEFF-ENYEKAASAAVLP----PGVYTLQDL 180
DS ++ C S E C+F ++Y ++ L ++ ++++
Sbjct: 262 NDSNINDVCVDLQKSK-----------EGCQFLPKDYLNSSLTKKLSDLSLSKIHDIEEI 310
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
G CPY+ R V+ ++ YQ LL I++ +++ +S+VV DEAHN+
Sbjct: 311 ADLGSNMKVCPYYSVRKGVEMTEIISLPYQILLSESTRAILNLQIE-DSIVVIDEAHNLM 369
Query: 241 NVCIEALSVSV 251
+ SV +
Sbjct: 370 DTITSMHSVCI 380
>gi|449491848|ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 132/307 (42%), Gaps = 61/307 (19%)
Query: 445 VFDRFQSVVITSGTLSPID---------LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTR 495
V D+ +VV+ GTL PI+ L P LNF S + + I PM ++
Sbjct: 569 VVDQAHAVVLAGGTLQPIEETRERLFPWLPPSQLNFF-----SCSHIVPPESILPMAVSS 623
Query: 496 GSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI 555
G ++ RS + + G LL +V++VP+GIV FF S+ Y +++ W SGI
Sbjct: 624 GPSGQLFDFSYNRRSSSAIVKELGLLLCNIVTVVPEGIVVFFSSFDYEEQVYGLWKTSGI 683
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKACDC------------GRGAVFFSVARGKVA 603
L IM+ K +F E + + L Y++ D GAV F+V GK++
Sbjct: 684 LDRIMKKKRIFREPRKNTDVESVLKEYKENIDALSKKDPKQNILSTSGAVLFAVVGGKIS 743
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLAR---LEYLRDTFQIKEGDFLT--------- 651
EGI+ GR ++M G+P+ L+ R +E L ++ IK F
Sbjct: 744 EGINLSDGMGRCIVMVGLPYPSPSDIELMERVKHIENLGNSNSIKSSKFYNDVPSGDVET 803
Query: 652 -FDALRQAA---------------QCVGRVIRSKADYGMMIFADKRY-SRHDKRS----- 689
+ LR Q +GR IR DY ++ D RY S KRS
Sbjct: 804 GLEILRSCKRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDVRYTSNSSKRSFSHPA 863
Query: 690 -KLPGWI 695
KLP WI
Sbjct: 864 DKLPKWI 870
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+K+ +C+RT ++ + + EL R A+++ I L SRK C+N VL +
Sbjct: 197 LKVYFCSRTHSQLSQFIREL--------RKTVFASELNVICLGSRKIFCINEEVLKLGSA 248
Query: 128 DSVDAAC----RKRTA--SWVRALAAENPNIET-----CEFFEN--YEKAASAAVLPPGV 174
++ C +K+T S + LA T C N +K + +
Sbjct: 249 SHINEQCLELQKKKTTETSKAKKLAGAGKMSRTKASSGCPMLRNPKLQKNFRSQISQREA 308
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL G++ G CPY+ +R +VQ A+++V YQ LL + + K S+V+ D
Sbjct: 309 LDIEDLIHLGRKVGTCPYYGSRSLVQGADLIVLPYQSLLSKSSRESLGLVL-KNSIVIID 367
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
EAHN+ + I V LE ++ R ERF
Sbjct: 368 EAHNLADSLISMHDSKVSYSQLENVHHHMERY---FERF 403
>gi|71413416|ref|XP_808847.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70873137|gb|EAN86996.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C D S AVK + S+++TSGTLSP++ + L VS + ++ + VL
Sbjct: 425 CLDTSCAVKTIVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVLGCVLC 484
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS- 553
+G ++ + R+ G LV + P G++ FF SY ++ I W
Sbjct: 485 KGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTPGGVLVFFPSYVALNAAIDLWRAGS 544
Query: 554 ----------GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGK 601
G+L+++ K VF+E + + + +++ D RGA+ +V RGK
Sbjct: 545 GRPGESLTVWGMLEDL---KPVFVEPVEASDLQTIVSRFQREVDSAPSRGAILLAVCRGK 601
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK---EGDFLTFD----- 653
++EGIDF ++GR V++ G+PF + + EYL + G T D
Sbjct: 602 ISEGIDFADNHGRCVVVAGIPFANHTDLFVRLKREYLTRVASHRPKVRGKLFTGDDWYMN 661
Query: 654 -ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
A+R QCVGRVIR K DYG+++ AD+R++ ++ L W+
Sbjct: 662 EAMRAVNQCVGRVIRHKDDYGVVLLADERFA--ERLDGLSEWV 702
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 38/274 (13%)
Query: 7 DVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK--- 63
DV V FP+ N YP Q YM + AL + + LLE PTGTGKT+ LL +++ +
Sbjct: 8 DVGVSFPF-NPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAWLEKRHGM 66
Query: 64 --------PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-LSSRKN 114
++IYC+RT ++ + ELK +TR+ I ++ L SR++
Sbjct: 67 TQQRYQIEGAGRTRVIYCSRTHAQLSHVIRELK-----RTRY----GDIFSMSLLGSREH 117
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE-KAASAAVLPPG 173
+CVNS+VL R TA +++ + C F+ ++ + + G
Sbjct: 118 MCVNSQVL------------RLSTAQAQQSMCNTLREEKNCRFYRGFQARNGHNTAVKDG 165
Query: 174 --VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
V+ ++DL + G++ G+CPY+ R + A++V Y Y+ D + + + K S++
Sbjct: 166 KWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRKQLPFNL-KGSIL 224
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+ DEAHN+ +V + ++++ L A + SR
Sbjct: 225 IVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSR 258
>gi|260832748|ref|XP_002611319.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
gi|229296690|gb|EEN67329.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
Length = 692
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 21/285 (7%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV--SRSFKMSLTR---DC-ICP 490
+ +L + + + ++V++ GT+ P+ + L F V R + S C + P
Sbjct: 389 NPALHFREIVQQARAVIMAGGTMQPVSEFKEHLLFAAGVEPQRITEFSCGHVIPGCNLLP 448
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
+ L G V ++ R+ + G++LV + ++VP G+ FF SY Y ++ +
Sbjct: 449 VALGSGPAGGAVDFSYEHRNKEYMMVELGRVLVNLCNLVPAGVCVFFPSYEYERQVYKFF 508
Query: 551 NDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR----------GAVFFSVARG 600
DSG+LK + K VF E + + L +Y K + GA+ FSV G
Sbjct: 509 EDSGVLKRLSVRKQVFREPKKASQVDQVLSDYSKCIQRCKTQGYKAMPLTGALLFSVVGG 568
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDF---LTFDAL-- 655
K++EGI+F GR V+M G+P+ S L +++YL T G + ++ L
Sbjct: 569 KMSEGINFSDDLGRCVVMVGLPYPNIKSPELKEKMDYLDATMPHTTGKSPGQIHYENLCM 628
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
+ Q +GR IR K DY ++ D+RY R + + LP WI +HL+
Sbjct: 629 KAVNQSIGRAIRHKEDYATIVLLDRRYFRPNVCAGLPNWISAHLQ 673
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 69 KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL------ 122
++ YC+RT ++ + + E+ Q G +++++G SR+NLC+N V
Sbjct: 3 QIYYCSRTHSQLAQFVREV------QKSPFGKDVRVVSLG--SRQNLCINDSVRKLGSSH 54
Query: 123 --------------AAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAA 168
E+RD D A RK+ R E+ C F ++ +
Sbjct: 55 LINDRCLEMQNNKKKEESRDKCDEAERKQK----RKRKGESAG---CPFHQHIPTYSDEV 107
Query: 169 VLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKE 228
+ V ++ L G++ CPY+ R+ + A +V Y LL + ++
Sbjct: 108 LAE--VRDIEQLVVKGRKMDACPYYGTRYSIPAAQLVALPYNTLLHRHTREVSGIKLAG- 164
Query: 229 SVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKA 275
+VV+ DEAHN+ + SV + T R S++ Q +R+K+
Sbjct: 165 NVVIIDEAHNLVDTITGIHSVEI---TGGQIARAYSQLTQYSQRYKS 208
>gi|449448180|ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cucumis sativus]
Length = 914
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 132/307 (42%), Gaps = 61/307 (19%)
Query: 445 VFDRFQSVVITSGTLSPID---------LYPRLLNFHPVVSRSFKMSLTRDCICPMVLTR 495
V D+ +VV+ GTL PI+ L P LNF S + + I PM ++
Sbjct: 583 VVDQAHAVVLAGGTLQPIEETRERLFPWLPPSQLNFF-----SCSHIVPPESILPMAVSS 637
Query: 496 GSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGI 555
G ++ RS + + G LL +V++VP+GIV FF S+ Y +++ W SGI
Sbjct: 638 GPSGQLFDFSYNRRSSSAIVKELGLLLCNIVTVVPEGIVVFFSSFDYEEQVYGLWKTSGI 697
Query: 556 LKEIMQHKLVFIETQDVVETTLALDNYRKACDC------------GRGAVFFSVARGKVA 603
L IM+ K +F E + + L Y++ D GAV F+V GK++
Sbjct: 698 LDRIMKKKRIFREPRKNTDVESVLKEYKENIDALSKKDPKQNILSTSGAVLFAVVGGKIS 757
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLAR---LEYLRDTFQIKEGDFLT--------- 651
EGI+ GR ++M G+P+ L+ R +E L ++ IK F
Sbjct: 758 EGINLSDGMGRCIVMVGLPYPSPSDIELMERVKHIENLGNSNSIKSSKFYNDVPSGDVET 817
Query: 652 -FDALRQAA---------------QCVGRVIRSKADYGMMIFADKRY-SRHDKRS----- 689
+ LR Q +GR IR DY ++ D RY S KRS
Sbjct: 818 GLEILRSCKRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDVRYTSNSSKRSFSHPA 877
Query: 690 -KLPGWI 695
KLP WI
Sbjct: 878 DKLPKWI 884
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+K+ +C+RT ++ + + EL R A+++ I L SRK C+N VL +
Sbjct: 211 LKVYFCSRTHSQLSQFIREL--------RKTVFASELNVICLGSRKIFCINEEVLKLGSA 262
Query: 128 DSVDAAC----RKRTA--SWVRALAAENPNIET-----CEFFEN--YEKAASAAVLPPGV 174
++ C +K+T S + LA T C N +K + +
Sbjct: 263 SHINEQCLELQKKKTTETSKAKKLAGAGKMSRTKASSGCPMLRNPKLQKNFRSQISQREA 322
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL G++ G CPY+ +R +VQ A+++V YQ LL + + K S+V+ D
Sbjct: 323 LDIEDLIHLGRKVGTCPYYGSRSLVQGADLIVLPYQSLLSKSSRESLGLVL-KNSIVIID 381
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERF 273
EAHN+ + I V LE ++ R ERF
Sbjct: 382 EAHNLADSLISMHDSKVSYSQLENVHHHMERY---FERF 417
>gi|440803958|gb|ELR24841.1| DEAD/H (AspGlu-Ala-Asp/His) box polypeptide 11, putative
[Acanthamoeba castellanii str. Neff]
Length = 1005
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 129/307 (42%), Gaps = 57/307 (18%)
Query: 450 QSVVITSGTLSPI-DLYPRLLNFHPVVSRSFKMSLT--RDCICPMVLTR----------G 496
++VV+ GT+ PI DL +L V K L R C V+T G
Sbjct: 648 RAVVLAGGTMHPIPDLVFQLFGPEAEVPEPIKPKLVGLRSFSCGHVITSESLLTLCVGSG 707
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGIL 556
+P + RS + G+L++ M ++VPDG+V FF SY Y ++I+TW SG+L
Sbjct: 708 PSDVPFDFAWQNRSSAAMIEELGRLVLNMCNLVPDGVVMFFPSYHYEQQVISTWETSGML 767
Query: 557 KEIMQHKLVFIETQDVVETTLALDNYRKACDCG-------------RGAVFFSVARGKVA 603
+I K V E + L+ Y+ A D RGA+ +V GK++
Sbjct: 768 AKINARKKVLREPRAASMIGQVLEEYKDAIDANFTPTGAAASTSRQRGAILSAVVGGKMS 827
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ-------------------- 643
EGI+F GR V+M G+P+ +L+ +++Y+
Sbjct: 828 EGINFSDGLGRCVVMVGLPYPNPRDPVLVEKMKYISAKAAAAAASTSSSSSSSSSWSSSS 887
Query: 644 -----------IKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
+ + +R Q +GR IR DY ++ D RY R + SKLP
Sbjct: 888 SPARRAMSAPVMSARQYYENACMRAVNQSIGRSIRHAGDYATILLVDHRYMRPEITSKLP 947
Query: 693 GWILSHL 699
WI + +
Sbjct: 948 RWIAATM 954
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 51/224 (22%)
Query: 101 AAKILAIGLSSRKNLCVNSRV--------------------------LAAENRDSVDAAC 134
A ++ + L SRKNLCVN++V + E+ + A
Sbjct: 254 ADRMRVVTLGSRKNLCVNAKVKRSPQKLSSVGAINDRCLDMQKQKTLVTGEDIPGLSYAA 313
Query: 135 RKRTA----SWVRALAAENPN----------IETCEFFENYEKAASAAVLPPGVYTLQDL 180
R RTA S + + E N + CE++E + + V +++L
Sbjct: 314 RTRTAHAILSNIPFITTEEENMFGKAKKSVVLSKCEWYEQSSQKLYRDHVLLKVRDIEEL 373
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
G++Q CPY+ R V VV Y LL + ++ K ++VV DEAHN+
Sbjct: 374 VQLGEKQRACPYYGTRAAVPSVEVVALPYNMLLHRATRESLGVDL-KGNIVVVDEAHNLV 432
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ E S + L + ++++++A RL+A+
Sbjct: 433 DAINEMYSTQL----------TLRQAESQLDQYRARYQNRLKAK 466
>gi|385805025|ref|YP_005841425.1| DNA repair helicase Rad3 [Haloquadratum walsbyi C23]
gi|339730517|emb|CCC41858.1| DNA repair helicase Rad3 [Haloquadratum walsbyi C23]
Length = 731
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 166/731 (22%), Positives = 295/731 (40%), Gaps = 117/731 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
+FPY+ YP Q+S M E+ ALD + L E GTGKT++ L +Y K
Sbjct: 10 FFPYEEPYPNQHSAMSEIAEALDEQRDVLFEGAPGTGKTLSALCPAIAYARQTD----KT 65
Query: 71 IYCTRTVHE-MEKTLAELK-LLHN----------------------YQT-RHLGPAAKIL 105
+ T VH+ M + +A+ + ++H+ YQ + L + L
Sbjct: 66 VVITTNVHQQMRQFVADARAIVHSGIDTIRAVVFKGKSSMCHIDVGYQECQTLRDTTRSL 125
Query: 106 AIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTA--SWVRALAAENPNIET---CEFFEN 160
R L + L E R+ D A R+A + ++ +E ++ + CE++ N
Sbjct: 126 VDKERERTQLREQATALLDEIREGNDGAASARSAVTDELESVTSEIEDLSSGNICEYYRN 185
Query: 161 YEKAASAAV-----LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDP 215
A A L V T +++ A+ +Q+ C Y L + ++ ++V+ +Y +LLDP
Sbjct: 186 NLTEADATEAFFQWLFDDVRTAEEIYAYAEQRQLCGYELLKEGIEGVDLVICNYHHLLDP 245
Query: 216 KVAGIISKEMQKES---VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIER 272
+ + + ++ V +FDEAHNI++ + ++ TLE A L+ I ++ E
Sbjct: 246 AIREQFFRWLGRDPDDIVTIFDEAHNIESAARDHAGRTLTENTLEEA---LTEI-KDCED 301
Query: 273 FKATDAGRLRAEYNRLVE-------GLALRGNLPNAW----LSNPALPSDILKEAVPGNI 321
+A A + + ++ G R + + W ++N D+ E +
Sbjct: 302 SRAEPAANVFEAFLTALQTTYADAFGFGEREQVTSEWYDLTVANTDRRDDLTLEFLQQYE 361
Query: 322 RRA-EHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSL 380
R + + + R+L + + R ET A+ + T + C +
Sbjct: 362 GRGIDTEIDLARQLAESIDSRYET----------------AYKNGETATRKECQALHAAT 405
Query: 381 MLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASL 440
L +TD+D VGT+ +I DE + +C ++
Sbjct: 406 FLNAWMTDSD-------------TVGTH----PLISVRRDETTNEVYARAELYTCIPRAV 448
Query: 441 AVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQL 500
+FD + ++ S TL P D+ +L V +++++ P R L
Sbjct: 449 TAD-LFDEVHASILMSATLRPFDVAEDVLGLSNPVQMAYELAY------PAENRR---TL 498
Query: 501 PVSTKF---DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
V T R+DP L + P + FF SY+ E AT
Sbjct: 499 AVKTPALFSSARNDPDTQSIIADTLADAARFTPGNALFFFPSYAEA-ERYAT-------- 549
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
++ QH V + E+ + R++ G V + G +AEG+ FD R V
Sbjct: 550 QLRQHDAVSKPVM-LDESGTETEPLRQSFVDQNGCVLCTSLWGTLAEGVSFDDDDARTVA 608
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKEGDF---LTFDALRQAAQCVGRVIRSKADYGM 674
+ GVP+ + + + Y R K+ + + +R+ Q +GRVIRS +DYG+
Sbjct: 609 VVGVPYPHLSERAEAVQSAYDRAYSGRKDAGWRYGIEIPTIRKTRQALGRVIRSPSDYGV 668
Query: 675 MIFADKRYSRH 685
+ DKRY++
Sbjct: 669 RLLIDKRYTQE 679
>gi|407849947|gb|EKG04513.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C D S AVK + S+++TSGTLSP++ + L VS + ++ + VL
Sbjct: 425 CLDTSCAVKTLVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVLGCVLC 484
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS- 553
+G ++ + R+ G LV + P G++ FF SY ++ I W
Sbjct: 485 KGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTPGGVLVFFPSYVALNAAIELWRAGS 544
Query: 554 ----------GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGK 601
G+L+++ K VF+E + + + +++ D RGA+ +V RGK
Sbjct: 545 GRPGESLTVWGMLEDL---KPVFVEPVEASDLQTIVSRFQREVDSAPSRGAILLAVCRGK 601
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK---EGDFLTFD----- 653
++EGIDF ++GR V++ G+PF + + EYL + G T D
Sbjct: 602 ISEGIDFADNHGRCVVVAGIPFANHTDLFVRLKREYLTRVASHRPKVRGKLFTGDDWYMT 661
Query: 654 -ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
A+R QCVGRVIR K DYG+++ AD+R++ ++ L W+
Sbjct: 662 EAMRAVNQCVGRVIRHKDDYGVILLADERFA--ERLDGLSEWV 702
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 38/276 (13%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK- 63
+ DV V FP+ N YP Q YM + AL+ + + LLE PTGTGKT+ LL +++ +
Sbjct: 6 IADVGVSFPF-NPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSALAWLEKRR 64
Query: 64 ----------PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-LSSR 112
++IYC+RT ++ + + ELK +TR+ I ++ L SR
Sbjct: 65 GMTQQRYQIEGAGRTRVIYCSRTHAQLRQVIRELK-----RTRY----GDIFSMSLLGSR 115
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKA---ASAAV 169
+++CVNS+VL R TA +++ + C F+ ++ +A
Sbjct: 116 EHMCVNSQVL------------RLPTAQAQQSMCNTLREEKKCRFYRGFQARNDHNTAVK 163
Query: 170 LPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
V+ ++DL + G++ G+CPY+ R + A++V Y Y+ D + + + K S
Sbjct: 164 DGKWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRKQLPFNL-KGS 222
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+++ DEAHN+ +V + ++++ L A + SR
Sbjct: 223 ILIVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSR 258
>gi|255539256|ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
gi|223551394|gb|EEF52880.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
Length = 1248
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 45/341 (13%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC-I 488
L L C + ++ + + D SV++TSGTLSP++ + L + + +
Sbjct: 458 TLSLWCLNPAVVFRDIADLSLSVILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDNESQV 517
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIA 548
V++ G D P++ + + GK L E+ IVP G + FF SY M+++
Sbjct: 518 WAAVISTGPDNYPLNASYKTADEFAFQDALGKTLEEICMIVPAGSLVFFPSYKLMEKLCN 577
Query: 549 TWNDSGILKEIMQHKLVFIETQDVVET---TLALDNYRKACDC----------------- 588
W ++G + K +F+E + E ++ Y C C
Sbjct: 578 RWRETGQWSRLNAKKSLFVEPRGSQEEEFDSVLKGYYDSICKCNTHAVGRKKRVKRLDLK 637
Query: 589 ---------GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR 639
G+GA F +V RGKV+EG+DF R+VI+ G+PF L + + Y
Sbjct: 638 KAVESTENLGKGAAFLAVCRGKVSEGMDFSDDNARVVIVVGIPFPNILDIQVRLKKSY-N 696
Query: 640 DTFQIKE-----GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
DT++ + ++ + A R Q +GR IR + DYG +I D+RY + R + W
Sbjct: 697 DTYKTSKNLLSGNEWYCYQAFRALNQAIGRCIRHRFDYGAIILLDERYKKEQNRMYISKW 756
Query: 695 ILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRK 735
+ + S M++ + F R + + +IG+K
Sbjct: 757 LRKSICQYD---SYSMSIEGLKSFFRDVKE------NIGKK 788
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 73/311 (23%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDA---KGHC--LLEMPTGTGKTIALLSLIT 57
+ + + V FPY P Q ++M + LD GHC LLE PTGTGK+++LL
Sbjct: 19 YHIGGIQVEFPYQPYGP-QLAFMGRVISTLDRAVRDGHCHALLESPTGTGKSLSLLCSTL 77
Query: 58 SY-------------VLSKPENPVKLI--------YCTRT------------------VH 78
++ SKP NP + + T V
Sbjct: 78 AWQQNYKSKQQLADLTQSKP-NPEAITDPIGHGGGFIPETQPSSIPPSGNLEAAQPAAVS 136
Query: 79 EMEKTLAELKLLHNYQT---------RHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
+ +K A + ++ +T + A ++ L+SR++ C N+ V EN
Sbjct: 137 KTQKKKAAPTIFYSSRTHGQITQVIREYRKTAYRVPMAVLASRRHYCTNAHVNGKEN--- 193
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG----VYTLQDLRAFGK 185
+D C+ L ++P+ C F+N K L G V+ ++DL GK
Sbjct: 194 IDEECK---------LLLKDPDA-GCLQFKNAHKVKGHPSLQRGGCHEVHDIEDLVKVGK 243
Query: 186 QQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIE 245
C Y+ AR M A +V Y Y+++P + G + ++ + ++++ DEAHNI+++ +
Sbjct: 244 VVRGCSYYAARSMADDAQLVFCPYNYVINPVIRGAMEIDI-RGAILILDEAHNIEDIARD 302
Query: 246 ALSVSVRRQTL 256
A SV V L
Sbjct: 303 AGSVDVEEDIL 313
>gi|255723968|ref|XP_002546913.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134804|gb|EER34358.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 812
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP-----M 491
D S K + D+ + V++ GT+ P+ Y L P VS+ T + P +
Sbjct: 519 DPSAVFKEIVDQAKCVLLCGGTMEPMSDYVDYL--FPSVSKEKINRFTCGHVIPKENLEV 576
Query: 492 VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
+ + FD R++P G+ ++E+ VP G+V FF SY Y+++++ +W
Sbjct: 577 FPVKQFKEFQFEFSFDKRNNPVQLNALGRFIIEICQRVPYGLVIFFPSYKYLNQVLESWK 636
Query: 552 DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-GAVFFSVARGKVAEGIDFDR 610
+ GIL I +K VF E D + L Y + R GA+ FSV GK++EGI+F
Sbjct: 637 N-GILSTIECYKSVFQEPSDPSKVEFTLGQYASVINTERKGAILFSVVGGKMSEGINFSD 695
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTF--------QIKEGDFLTFDAL--RQAAQ 660
R V+M G+P+ S ++A+++++ Q KE ++ L R Q
Sbjct: 696 DLARAVVMVGLPYPNAYSGEMVAKMKFIETNVLQNGGTIQQAKEKSRNYYENLCMRAVNQ 755
Query: 661 CVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
+GR IR DY + DKR+ +SKL W+ + +
Sbjct: 756 SIGRSIRHIKDYSTIYLIDKRFEYPRIQSKLSQWVKQRINN 796
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P+K+ Y +RT ++ + ++L+L H ++ + I L SRK LC+N +V +
Sbjct: 197 ECPIKIFYSSRTHSQLNQFSSQLRLTH-FEASFEELNERTKYIPLGSRKQLCINEKVRSK 255
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFF-ENYEKAAS----AAVLPPGVYTLQD 179
N S++ AC N CEF +NY + A + + ++D
Sbjct: 256 GNDQSMNDAC-----------IDLQRNSNGCEFLPKNYMTSNVTKDFADLSLAKIRDIED 304
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G + CPY+ R V+ ++ YQ + I++ ++ K+++++ DEAHNI
Sbjct: 305 LGELGTELRICPYYSVRRGVELTEIISLPYQMIFQDTTRRILNLDV-KDAIIIIDEAHNI 363
Query: 240 DNVCIEALSVSVRRQTLEGATRNL 263
+ S+ + L ++L
Sbjct: 364 IDTITSMYSLKITADQLNKVIKSL 387
>gi|401415594|ref|XP_003872292.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488516|emb|CBZ23762.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 953
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 25/268 (9%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
D + ++ V SV++TSGTLSP+D + L V + D + VL RG
Sbjct: 423 DNTRLMRQVVSPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPDQVLGGVLCRG 482
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS--- 553
++ F RS G L + P G + FF SY+ M+ ++ W
Sbjct: 483 PSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGTLVFFPSYAAMNSVVDLWRAGSGR 542
Query: 554 --------GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGKVA 603
G+L E+ K +F+E + + + ++K D RGA+ +V RGK++
Sbjct: 543 AGDTKTVWGMLSEL---KPIFVEPNNTNDLPTIVQGFQKEVDTSPLRGAILLAVCRGKIS 599
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY---------LRDTFQIKEGDFLTFDA 654
EGIDF ++GR V++ G+P+ + + EY L D D+ +A
Sbjct: 600 EGIDFADNHGRCVLVAGIPYANHTDLFVRLKREYITSVAPQRPLVDGKPFTGDDWYRNEA 659
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRY 682
+R QCVGRVIR K DYG+++ AD+R+
Sbjct: 660 MRAVNQCVGRVIRHKDDYGVVLLADERF 687
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 42/258 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+ +TV FP+D YP Q +M + + L + LLE PTGTGKT+ LL ++ ++
Sbjct: 7 VNGITVSFPFDP-YPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLAARS 65
Query: 65 ENPV-----------------KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAI 107
+ V K++YC+RT ++ + + ELK Q +AI
Sbjct: 66 QGAVLRHPSDQDQKGRGKYSHKVVYCSRTHAQLAQVVRELKRTSYAQ-------CFTMAI 118
Query: 108 GLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKA-AS 166
L SR+++C+N V + + A C AL +E C FF + A A
Sbjct: 119 -LGSREHMCLNKEVTRLPSSQAQHAMCS--------ALRSE----RNCRFFRGLQSAGAG 165
Query: 167 AAVLPPG--VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKE 224
A++LPP V+ ++DL G + G+CPYF R + A+VV+ Y Y+LDP + + E
Sbjct: 166 ASLLPPACAVHDMEDLMREGSRSGFCPYFHERDAARDADVVLMPYNYILDPSLHKQLPFE 225
Query: 225 MQKESVVVFDEAHNIDNV 242
+ +++ DEAHN+ +V
Sbjct: 226 L-ANCILIVDEAHNLPSV 242
>gi|270006445|gb|EFA02893.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Tribolium
castaneum]
Length = 817
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 158/677 (23%), Positives = 278/677 (41%), Gaps = 93/677 (13%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAK-ILAIGLSSRKNLCVNSRVLAAE 125
P K+ C+RT ++ + + E+ P K I L+SR+N C+N V +
Sbjct: 173 PTKIFICSRTHSQLSQFIGEI---------LKSPFGKNIRVASLASRQNYCINPNVNKLK 223
Query: 126 NRDSVDAAC---RKRTASWVRA----LAAENPNIETCEFFENYEKAASAAVLPPGVYTLQ 178
N ++ C +K++ S A + C +++ + V ++
Sbjct: 224 NNSLINEKCLDMQKQSKSQKDADGKTIKKPRGTTTKCPYYKQSTIEDLKDLTLTEVQDVE 283
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DL GK+ CPY+ +R + A VV+ Y +L ++ K++V++ DEAHN
Sbjct: 284 DLVKSGKELNACPYYSSRLAAEDAEVVLVPYNTILHKATREANGIDL-KDNVIIIDEAHN 342
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQ---EIERFKATDAGRLRAEYNRLVEGLALR 295
+ +EA+ + + S+I+Q +++ +K R A L+ L
Sbjct: 343 L----LEAMG------QMYSSELTYSQIDQGLLQVKCYKQRFNTRFSAPNLLLINQLIFV 392
Query: 296 -GNLPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLR-GRLET--------- 344
L N +D+ + + A+ + RLV++ + GR+
Sbjct: 393 ITKLQQLLDQNSEEKTDVF--TIENFVLTAKIDNFNMFRLVKFCKDGRIAQKVRSYALKY 450
Query: 345 -------ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQT 397
E K+G F++SIT +T+ E+ + LT + FL
Sbjct: 451 PFDKSIIEKPAKKGVKDFLSSITNK----NETVEQNIEKPAAFALTNPLLAIISFLE--- 503
Query: 398 ICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSG 457
TL +Y G + D+ LQ + + + + +SV++ G
Sbjct: 504 -----TLTYSYKDGRIFVHTNQDKSKIK-----LQFLLLNPTQNFEDIVKLARSVIVCGG 553
Query: 458 TLSPIDLYPRLLNFHPVVS--RSFKMS----LTRDCICPMVLTRGSDQLPVSTKFDMRSD 511
T+ P + + L VS R F+ S + + I P+++T G+++ + F+ R
Sbjct: 554 TMKPNEEFRNRLFISSGVSPERIFEFSCGHIIPPENILPVIMTEGANKEKLLFNFERRMS 613
Query: 512 ----PGV--ARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLV 565
P + Y LV V GIV FF SY+Y + + W +K++ +LV
Sbjct: 614 MVCTPVTVPSTEYSTDLV-----VKGGIVVFFPSYNYENWV---WQQ---IKDVSFGRLV 662
Query: 566 FIETQDVVETTLALDNYRKAC-DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
F E QD L +Y A GA+ SV GK++EG++F GR VI+ G+P+
Sbjct: 663 FREPQDSGSVDSVLKSYSDAVHKSNSGALLLSVVGGKLSEGLNFSDDLGRCVIVVGLPYA 722
Query: 625 YTLSKILLARLEYLRDTFQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 683
+ L ++ +L G F ++ Q +GR +R K DY ++ D+RY+
Sbjct: 723 NITAPDLKEKMSHLDKIEGSGAGKRFYESLCMKAVNQSIGRAVRHKNDYATILLLDERYN 782
Query: 684 RHDKRSKLPGWILSHLR 700
R + LP WI L+
Sbjct: 783 RTATKEALPDWIKKSLK 799
>gi|426195896|gb|EKV45825.1| histidine phosphotransfer protein [Agaricus bisporus var. bisporus
H97]
Length = 863
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 18/273 (6%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLP 501
V D +SV++ GT+SP+ D+ +L + R+F + + +V+T+
Sbjct: 570 VVDEARSVILAGGTMSPMSDVVSQLFSHALERIRTFSCGHVIPEKNLQALVVTKSPRGGS 629
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ K D + DP V G++L+ +++P G+V FF SYS++ + W G L
Sbjct: 630 LEYKADKQGDPNVVAELGQILLNFANVIPAGVVVFFPSYSFLKFAKSVWKAGGTLDRFSA 689
Query: 562 HKLVFIETQDVVETTLALDNYRKACDC----GRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
+ VF E + L Y A +GA+ F+V K++EG++F R VI
Sbjct: 690 KREVFFEPDGSTDVERVLGEYAAAATTPPVNKKGAILFAVIGAKLSEGLNFSDDLARAVI 749
Query: 618 MFGVPFQYTLSKILLARLEYL-----RDTFQIKEG------DFLTFDALRQAAQCVGRVI 666
+ G+PF S L RL+Y+ R F+ ++G + + Q +GR I
Sbjct: 750 VIGLPFANLGSPELKERLKYVKQLEERRGFKREKGQKDAAAELYENMCMNSVNQSIGRAI 809
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
R K D+ +I D+RY+ R KLP WI L
Sbjct: 810 RHKGDWASLILLDQRYASSAIRMKLPQWIGGRL 842
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 44/212 (20%)
Query: 60 VLSKPENP---------VKLIYCTRTVHEMEKTLAEL---KLLHNYQTRHLGPA------ 101
++S+ +NP K+ Y +RT ++ + L EL KL L P+
Sbjct: 185 LMSRVDNPSRLDEETICTKIYYASRTHSQLSQVLPELRKIKLSQAVSVIDLHPSSVPQKR 244
Query: 102 -AKIL---------AIGLSSRKNLCVNSRVLAAENRDSVDAACRK----RTASWVRALAA 147
A +L + L SRK LC+N L ++ RD +D ACR+ + L
Sbjct: 245 GADVLHDVDSTTTRVVALGSRKQLCINDE-LRSKARD-LDEACRELLSEKGDQRCPYLPP 302
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+I+ +F + A ++DL G+ CPYF +RH + A +V
Sbjct: 303 PGEDIKIIDFRDQILAAPK---------DIEDLAEVGRMADTCPYFGSRHAIPQAELVTL 353
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
Y LL + ++ ++ +VV DEAHN+
Sbjct: 354 PYNLLLQKSAREALGIDL-RDQIVVIDEAHNL 384
>gi|326430720|gb|EGD76290.1| hypothetical protein PTSG_00993 [Salpingoeca sp. ATCC 50818]
Length = 871
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 428 DPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMS----- 482
D LQ + ++ + V + ++V + GT+ + + + + +R+ K+S
Sbjct: 565 DASLQFMLLNPAIYFEEVLLKARAVAVVGGTMGSMSEF--VQHLQTPKTRALKVSTFSCG 622
Query: 483 --LTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
+ + I + T G P F R + + G+LLV + +VP G+V FF SY
Sbjct: 623 HVVNGNNIIALAATHGPTNEPFRFTFANRKNKAMVEGLGRLLVNVCRVVPAGVVVFFPSY 682
Query: 541 SYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARG 600
D I W G+L + + K V E + +T L Y A GRG + F+V G
Sbjct: 683 DTEDFIYQHWKACGVLDSLQRLKQVVREPRAAGKTDECLTEYSNAVQQGRGGLLFAVVGG 742
Query: 601 KVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL--------RDTFQIKEGD-FLT 651
K++EGI+F GR V+M G+P+ S L ++ YL R+ G+ +
Sbjct: 743 KLSEGINFKDDLGRCVVMVGLPYPNRHSPALQEKMAYLDKRAGSGARNANGQSPGEAYYE 802
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
++ Q +GR IR + DY ++ D RY+R S+LP W+
Sbjct: 803 NLCMKAVNQSIGRAIRHRNDYAAILLVDDRYARPRIASQLPEWM 846
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 63 KPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
+P K+ +C+RT ++ + ++E+K P + + L SR+NLC N RV
Sbjct: 233 EPPRIRKIFFCSRTHSQLAQFVSEVKN---------SPFSDVRLTALGSRQNLCTNPRVN 283
Query: 123 AAENRDSVDAACR--KRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL 180
+ +++ C ++T + + + ++ C ++ ++ +++
Sbjct: 284 KLSSLHAINEKCLDLQKTKNEIDPKTGKAVKVKKCPMLNPRSMNVTSNIILGSPQDIEEA 343
Query: 181 RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240
G++ G C Y+ +R V+FA +V+ Y LL + ++ K+++V+ DEAHN+
Sbjct: 344 AVVGERLGACAYYASRQAVEFAELVLLPYNMLLHKPTREAVGLDL-KDNIVIVDEAHNLV 402
Query: 241 NVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
S + R LE A LS Q +++FK
Sbjct: 403 ETIAALHSAKLARLELEQAHAALS---QYMDKFK 433
>gi|451852903|gb|EMD66197.1| hypothetical protein COCSADRAFT_137550 [Cochliobolus sativus
ND90Pr]
Length = 860
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 32/295 (10%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPR-LLNF---HPVVSRSFKMSLTRDCICPMV 492
D + K + + ++VV+ GT+SP+ Y + LL++ + + S + + +
Sbjct: 545 DPTFHFKDIVEEARAVVLAGGTMSPMSDYKQHLLSYLDPSKIKTLSCGHVIPPSNLLAVP 604
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-- 550
+ R + F+ R+ + G + +PDG+V FF SYSY+D IA W
Sbjct: 605 VVRATSGAEFDFTFENRNKEKTMNDLGAAISAFTRDIPDGVVVFFPSYSYLDTCIAAWKR 664
Query: 551 -----NDSGILKEIMQHKLVFIE--------------TQDVVETTLALDNYRKACDCGRG 591
+++ K VF+E + V++ L + AC GRG
Sbjct: 665 LKPSQSNTTFWDTFKNSKPVFLEQRSQQQNLDASSAVKEGAVDSVLNAYSTAIACGNGRG 724
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD--- 648
A+ F+V G ++EGI+F GR V++ G+PF S A+++Y+ GD
Sbjct: 725 ALLFAVIGGTLSEGINFSDALGRGVVVVGLPFPNAHSAEWKAKMQYIAAKEAKNGGDGKA 784
Query: 649 ----FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
F +R QCVGR IR K DY ++ D+RY + KLP WI L
Sbjct: 785 AAREFYENACMRSVNQCVGRAIRHKGDYAAILMLDRRYGSKRIQDKLPKWIRGSL 839
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 46 TGKTIALLSLITS--YVLSKPEN-------PVKLIYCTRTVHEMEKTLAELKLL------ 90
+G + A +L+ S Y P+N K+ +C+RT ++ + +EL +
Sbjct: 169 SGLSAATQALMASLGYADDAPKNDDGEVPDETKIFFCSRTHSQLTQFSSELGRVKMPPAI 228
Query: 91 ------HNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK-RTASWVR 143
++ T L K L +G SRKNLC+N +V + +++ C + + S
Sbjct: 229 ALDDDTNSADTDSLVEDIKHLTLG--SRKNLCINDKVNKLGSATAINERCLELQQNSSTE 286
Query: 144 ALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFAN 203
+ P+ E+ ++ A A + ++DL + GK+ G CPY+ +R ++
Sbjct: 287 SRCPHMPSKESEPLINDFRDHALAKI-----RDIEDLGSLGKKLGVCPYYASRPATKYCE 341
Query: 204 VVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+V Y LL + + K+ VV+ DEAHN+ + SVSV TL +
Sbjct: 342 IVTLPYPLLLQRTAREALGLSL-KDHVVIIDEAHNLMDAIAGIYSVSV---TLGQVQQAR 397
Query: 264 SRINQEIERFKATDAGRLR 282
+++ +++F+ G+ R
Sbjct: 398 AQLTAYLQKFRNKLKGKNR 416
>gi|409044127|gb|EKM53609.1| hypothetical protein PHACADRAFT_148290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 859
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 25/267 (9%)
Query: 454 ITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+ GT+SPI D+ +L F P + + S + + + +V+ +G + KF+ R
Sbjct: 565 LAGGTMSPISDITAQLFPFVPQERLTTFSCGHIVPPNSLQTLVVKKGPKGSQMQFKFESR 624
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIET 569
+D + G++L S+VP G+V F SY ++ ++ W SG+L+ + K VF E
Sbjct: 625 NDHALLAELGQVLFNFASLVPGGMVVFVPSYGFLHTVMGVWEKSGLLERLRSKKKVFTEP 684
Query: 570 QDVVETTLALDNY----RKACDCG-------RGAVFFSVARGKVAEGIDFDRHYGRLVIM 618
Q+ E L +Y + A D RGA+ F+V K++EG++F + R V++
Sbjct: 685 QESAEVETVLRDYAAEIQSAGDGAPADTSKKRGALLFAVVGAKLSEGLNFSDNLARAVVI 744
Query: 619 FGVPFQYTLSKILLARLEYLRDTFQIKE---------GDFLTFDALRQAA-QCVGRVIRS 668
G+PF S L R+ Y+ Q ++ G L + A Q +GR IR
Sbjct: 745 VGLPFANLASPELRERMAYVNRQQQGRDVKPAGAKDAGTELYENMCMNAVNQSIGRAIRH 804
Query: 669 KADYGMMIFADKRYSRHDKRSKLPGWI 695
+ D+ +I D RY+ R+KLP WI
Sbjct: 805 RGDWASLILLDSRYASPRIRNKLPKWI 831
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 57/275 (20%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLH------NYQTRHLGPAAKILAIGLSSRKNLCVNSRV 121
K+ Y +RT ++ + L EL+ L + ++ I + L+SRK LCVN +
Sbjct: 190 TKIYYTSRTHSQLSQVLQELRKLSISLSPSSDDEQNDASVVDIRTVSLASRKQLCVNEK- 248
Query: 122 LAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPG-------- 173
L + D +D ACR+ L +E + + C + LPP
Sbjct: 249 LKGKGGD-LDEACRQ--------LLSEKGD-KRCSY------------LPPADDETRMLD 286
Query: 174 -----VYTLQDLRAF---GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEM 225
+ T +D+ + G++ CPYF +R + A +V+ Y LL + ++
Sbjct: 287 MRDQILATPKDIESLVQTGQESRTCPYFGSRKAILQAQLVLLPYNLLLQRTARESLGIDL 346
Query: 226 QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEY 285
+ V++ DEAHN+ + + +V + +TL + +L++++ + +F+ RL E+
Sbjct: 347 -TDQVIIVDEAHNLISTLLSLSTVQLPLRTL---STSLNQLSIYLSKFR----NRLSTEH 398
Query: 286 N----RLVEGLALRGNLPNAWLSNPALPSDILKEA 316
+ RLV L N W + + I+ ++
Sbjct: 399 SLHLRRLVGLLEALSNFAEDWKAKRTASTSIVTKS 433
>gi|298706777|emb|CBJ29700.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1061
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 29/318 (9%)
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN--FHPVVSRSFKMSLTRDCICPMV 492
C AS + + SVV+TSGTLSP++ + L F + + +++ + C+ V
Sbjct: 586 CQSASTCFSEIDKQVHSVVLTSGTLSPMNSFAGELGIEFPHRLEANHVINVKKQCLVTSV 645
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWND 552
G ++ + ++ + D G L++ +VP GI+ FF SY MD++ W
Sbjct: 646 GYFG--KVSLDARYTNQHDLKYQDALGNALLQHARVVPGGILVFFPSYGLMDKMHDRWEV 703
Query: 553 SGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR----------------GAVFFS 596
+G+L+ + + K V++E + + L Y + R GA+ +
Sbjct: 704 TGLLQALQEIKGVYLEPRGQGKIDGVLAEYYEDIAAARENQSSKENQYHSSTRTGAMMLA 763
Query: 597 VARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY-----LRDTFQIKEGDFLT 651
VARGKV+EGIDF R+ ++ G+P+ + ++ + EY RD + + +
Sbjct: 764 VARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRTRDPRLVGGRAWYS 823
Query: 652 FDALRQAAQCVGRVIRSKADYGMMIFADKRY-SRHDKRSKLPGWILSHLRDAHLNLSTDM 710
A R Q VGR IR ++D+G ++ D RY S + + L W+ S +R S ++
Sbjct: 824 LQAFRAVNQAVGRCIRHRSDFGAIVLCDPRYASSTETTASLSKWVRSSVRQCR---SVEV 880
Query: 711 ALHIAREFLRKMAQPYDK 728
+L + F R+ D+
Sbjct: 881 SLPLVEAFFRQHQPQKDQ 898
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 69 KLIYCTRTVHEMEKTLAELKL----LHNYQTRHLGPAAKILAIGL-SSRKNLCVNSRVLA 123
++ +C+RT ++ + +AEL+ + +G K ++ L +SRK+ C+N A
Sbjct: 228 RVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSTCINRE--A 285
Query: 124 AENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
+ +D AC++ L E + C + Y +A A P V+ +++
Sbjct: 286 CSDPKGIDDACKR--------LLKE----KACTY---YRRAKWAQTKLPPVWDVEEAVRM 330
Query: 184 GKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVC 243
G++ CPY+ AR + A++V+ Y YL+DP V I+ + K +VV+FDEAHN+++
Sbjct: 331 GQENQACPYYTARASLVNADLVLCPYNYLVDPGVREIMGINL-KNAVVIFDEAHNLEDSA 389
Query: 244 IEALSVSVRRQTLEGATRNLSRIN 267
EA S + + L A + R+
Sbjct: 390 REAASAKLSLRALANAAGEMHRLG 413
>gi|167999293|ref|XP_001752352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696747|gb|EDQ83085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 158/329 (48%), Gaps = 23/329 (6%)
Query: 430 VLQLSCHDASLAVKPVFDRF--QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDC 487
+L C + LA++ F + +SV++TSGTL+P++ + LN V +
Sbjct: 421 MLSWWCFNPGLAMEE-FSKMGVRSVILTSGTLAPLESFAIELNLAFDVRLENPHVIDASQ 479
Query: 488 ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
+ V++ G P+++ + R G +V IVPDG++ FF SY ++ I
Sbjct: 480 VWVGVVSNGPSGRPLNSSYRSRDSIEYKLELGNTIVNFARIVPDGVLVFFPSYYLLNSCI 539
Query: 548 ATWND--SG----ILKEIMQHKLVFIETQDVVETTLALDNYRKACD--CGRGAVFFSVAR 599
W SG + + I ++K +E ++ A +++ + GA+FF+V R
Sbjct: 540 EAWQTVTSGPAATVWERICRNKQPVVEPKESALFNQANEDFVAKINDPTSTGAIFFAVCR 599
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF--QIKEGDFLTFD---- 653
GKV+EG+DF GR V++ G+PF + + + E+L + +I + LT +
Sbjct: 600 GKVSEGLDFADRSGRAVVVTGIPFAMKMDPKVRLKREFLDEQARSRITKHKVLTGEEWYV 659
Query: 654 --ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA 711
A R Q VGRVIR + DYG +I D+R+ + +S++ W+ +++ H D A
Sbjct: 660 QQASRAVNQAVGRVIRHRNDYGAIILCDERFGQSGPQSQMSLWLRPYIKTYH--KFGDAA 717
Query: 712 LHIAREFLRK--MAQPYDKAGSIGRKTLL 738
+ R F + + P + ++G T L
Sbjct: 718 FSLTRFFKDRDTLGGPLKPSSAVGTATGL 746
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 60/282 (21%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLS 62
+K+ ++V FPYD Y Q YM + +L + LLE PTGTGKT+ LL ++ S
Sbjct: 4 YKVAGISVQFPYD-AYDCQLVYMERVISSLQQGRNALLESPTGTGKTLCLLCATLAWRES 62
Query: 63 -----------------------------------KPENPVKLIYCTRTVHEMEKTLAEL 87
+P+ P ++Y +RT ++++ + EL
Sbjct: 63 LIPLQQTSQSSQRVTSQSSQRGLMSLSQNDSEEALQPKLPT-IVYSSRTHSQLQQVIREL 121
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
K T + P K++ +G SR+ +C++ V R + + ACR T
Sbjct: 122 K-----ATVYSRP--KMVVLG--SREQMCIHREVQNLRGR-AQNHACRSLTKG------- 164
Query: 148 ENPNIETCEFFENY-EKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
C+ + + A + L ++DL GK +G CPYFL+R + A+++
Sbjct: 165 -----RNCKHYNGVADYAKNHPQLGEEPIDIEDLVKIGKTEGPCPYFLSRELHNSADILF 219
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
Y YL++ ++ ++ ++++FDEAHN+ +C +A S
Sbjct: 220 VPYNYLIEKEMRRSLTGVSWGRTILIFDEAHNLARICADAAS 261
>gi|71660707|ref|XP_822069.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70887462|gb|EAO00218.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C D S AVK + S+++TSGTLSP++ + L VS + ++ + VL
Sbjct: 425 CLDTSCAVKTLVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVLGCVLC 484
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS- 553
+G ++ + R+ G LV + P G++ FF SY ++ I W
Sbjct: 485 KGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTPGGVLVFFPSYVALNAAIDLWRAGS 544
Query: 554 ----------GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGK 601
G+L+++ K VF+E + + + +++ D RGA+ +V RGK
Sbjct: 545 GRPGESLTVWGMLEDL---KPVFVEPVEASDLRTIVSRFQREVDSAPSRGAILLAVCRGK 601
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIK---EGDFLTFD----- 653
++EGIDF ++GR V++ G+PF + + EYL + G T D
Sbjct: 602 ISEGIDFADNHGRCVVVAGIPFANHTDLFVRLKREYLTRVASHRPKVRGKLFTGDDWYMN 661
Query: 654 -ALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
A+R QCVGRVIR K DYG+++ AD+R++ ++ L W+
Sbjct: 662 EAMRAVNQCVGRVIRHKDDYGVVLLADERFA--ERLDGLSEWV 702
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 38/274 (13%)
Query: 7 DVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK--- 63
DV V FP+ N YP Q YM + AL + + LLE PTGTGKT+ LL +++ +
Sbjct: 8 DVGVSFPF-NPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAWLEKRNGM 66
Query: 64 --------PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-LSSRKN 114
++IYC+RT ++ + + ELK +TR+ I ++ L SR++
Sbjct: 67 TQQRYQIEGAGRTRVIYCSRTHAQLSQVIRELK-----RTRY----GDIFSMSLLGSREH 117
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKA---ASAAVLP 171
+CVNS+VL R TA +++ + C F+ ++ +A
Sbjct: 118 MCVNSQVL------------RLPTAQAQQSMCNTLREEKNCRFYRGFQARNDHNTAVKDG 165
Query: 172 PGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
V+ ++DL + G++ G+CPY+ R + A++V Y Y+ D + + + K S++
Sbjct: 166 KWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRKQLPFNL-KGSIL 224
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+ DEAHN+ +V + ++++ L A + SR
Sbjct: 225 IVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSR 258
>gi|389594205|ref|XP_003722349.1| putative helicase [Leishmania major strain Friedlin]
gi|321438847|emb|CBZ12607.1| putative helicase [Leishmania major strain Friedlin]
Length = 953
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 25/268 (9%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
D + ++ V SV++TSGTLSP+D + L V K + D + VL RG
Sbjct: 423 DNTRLMRQVVSPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGKHVIQADQVLGGVLCRG 482
Query: 497 SDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS--- 553
++ F RS G L + P G + FF SY+ M+ ++ W
Sbjct: 483 PSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGTLVFFPSYASMNSVVELWRAGSGR 542
Query: 554 --------GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGKVA 603
G+L E+ K +F+E + + + ++K D RGA+ +V RGK++
Sbjct: 543 AGDTKTVWGMLSEL---KPIFVEPNNSNDLPTIVQGFQKEVDTSPLRGAILLAVCRGKIS 599
Query: 604 EGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKE---------GDFLTFDA 654
EGIDF ++GR V++ G+P+ + + +Y+ + D+ +A
Sbjct: 600 EGIDFADNHGRCVLVAGIPYANHTDLFVRLKRDYITSVAPQRPLVHGKPFTGDDWYRNEA 659
Query: 655 LRQAAQCVGRVIRSKADYGMMIFADKRY 682
+R QCVGRVIR K DYG+++ AD+R+
Sbjct: 660 MRAVNQCVGRVIRHKDDYGVVLLADERF 687
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 128/258 (49%), Gaps = 42/258 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+ +TV FP+D YP Q +M + + L + LLE PTGTGKT+ LL ++ +
Sbjct: 7 VSGITVSFPFDP-YPAQVEFMRSVVKCLQNGFNGLLESPTGTGKTLCLLCSTLGWLSATS 65
Query: 65 ENPV-----------------KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAI 107
+ V K++YC+RT ++ + + ELK +Y R +A+
Sbjct: 66 QGAVLRHASDQDQKGRGKHNHKVVYCSRTHAQLTQVVRELKRT-SYAQRF------TMAV 118
Query: 108 GLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAAS- 166
L SR+++C+N V + + A C AL E C FF + AA+
Sbjct: 119 -LGSREHMCLNKEVTRLPSSQAQHAMCS--------ALRLER----NCRFFSGLQSAAAG 165
Query: 167 AAVLPP--GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKE 224
A++LPP V+ ++DL G + G+CPYF R + A+VV+ Y Y+LDP + + E
Sbjct: 166 ASLLPPECAVHDMEDLMREGSRSGFCPYFHERDAAKDADVVLMPYNYVLDPSLHKQLPFE 225
Query: 225 MQKESVVVFDEAHNIDNV 242
+ +++ DEAHN+ +V
Sbjct: 226 LAN-CILIVDEAHNLPSV 242
>gi|402588914|gb|EJW82847.1| hypothetical protein WUBG_06243, partial [Wuchereria bancrofti]
Length = 550
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 450 QSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR 509
+SV++TSGTLSP+D + L V+ + + D I + + + F R
Sbjct: 32 RSVIVTSGTLSPLDSFINNLGISFPVTLENQHAANVDQILCARIRSSQSGIDLCGTFHKR 91
Query: 510 SDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSG-----ILKEIMQHKL 564
S G+++V I+PDGI+ FF SY M+ + W I K I+ +K
Sbjct: 92 SSSAYVFGIGEVIVRACQIIPDGILVFFSSYVTMNTCLKFWKTLKFGPMFIWKTILAYKE 151
Query: 565 VFIETQDVVETTLALDNYRKACDCG-RGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 623
F+E + +E L +R+ G GA+ F+V R KV+EGIDF R VI+ G+P+
Sbjct: 152 AFVEPKSKLELKAVLLQFRQQVREGSNGAILFAVCRAKVSEGIDFLDSESRGVIVIGIPY 211
Query: 624 QYTLSKILLARLEYLRDT----------FQIKEGDFLTFDALRQAAQCVGRVIRSKADYG 673
T+ + + ++L + ++ +A+R Q +GRV+R K D+G
Sbjct: 212 APTMDPRIELKRQFLTKQRMAVAKQELRKNVSADEWYQVEAIRSVNQSIGRVLRHKNDFG 271
Query: 674 MMIFADKRYSRHDKRSKLPGWILSHLRD 701
++I AD R+ + + P W+ L++
Sbjct: 272 VVILADSRFCSMSSK-RFPSWMRECLKN 298
>gi|440492759|gb|ELQ75300.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH [Trachipleistophora hominis]
Length = 267
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
MIFK+ ++ +YFPY I PEQ SY+ E + + +EMP G+GKTI +LS SY
Sbjct: 1 MIFKISNIPIYFPYPTISPEQLSYIKETIASFTTTSNLFIEMPAGSGKTICILSAAVSYQ 60
Query: 61 LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR 120
L E+ V+ +YCTRTV E EKTL ELK L Y +H+ K + +GL+SRK+LCVN
Sbjct: 61 LYHVEDDVRFVYCTRTVQESEKTLVELKTLIAYVKQHV--KVKYMGLGLTSRKHLCVNED 118
Query: 121 VLAAENRDSVDAACRK 136
V + +++ +CRK
Sbjct: 119 V-----QGNIEMSCRK 129
>gi|407410515|gb|EKF32919.1| helicase, putative [Trypanosoma cruzi marinkellei]
Length = 951
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 138/283 (48%), Gaps = 27/283 (9%)
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C D S AVK + S+++TSGTLSP++ + L VS + ++ + VL
Sbjct: 425 CLDTSCAVKKLVAGLNSLLLTSGTLSPLEHFAAELGVEFGVSLKGAHVIQQNQVLGCVLC 484
Query: 495 RGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS- 553
+G ++ + R+ G LV + P G++ FF SY ++ I W
Sbjct: 485 KGPSGEKLNGAYAYRNSVDYRVGLGMSLVNISRNTPGGVLVFFPSYVALNAAIELWRAGS 544
Query: 554 ----------GILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGK 601
G+L+++ K VF+E + + + +++ D RGA+ +V RGK
Sbjct: 545 GRPGETLTVWGMLEDL---KPVFVEPVEASDLQTIVSRFQREVDSAPSRGAILLAVCRGK 601
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQ------YTLSKILLARLEYLRDTFQIK---EGDFLTF 652
++EGIDF ++GR V++ G+PF L + L R+ R + K D+
Sbjct: 602 ISEGIDFADNHGRCVVVAGIPFANHTDLFVRLKREHLTRVAPHRPKVRGKLFTGDDWYMN 661
Query: 653 DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+A+R QCVGRVIR K DYG+++ AD+R++ ++ L W+
Sbjct: 662 EAMRAVNQCVGRVIRHKDDYGVVLLADERFA--ERLDGLSEWV 702
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 138/274 (50%), Gaps = 38/274 (13%)
Query: 7 DVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSK--- 63
DV V FP+ N YP Q YM + AL+ + + LLE PTGTGKT+ LL + +++ +
Sbjct: 8 DVGVSFPF-NPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSVLAWLEKRHGM 66
Query: 64 --------PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-LSSRKN 114
++IYC+RT ++ + + ELK +TR+ I ++ L SR++
Sbjct: 67 TQQRYQMEGAGRTRVIYCSRTHAQLSQVIRELK-----RTRY----GDIFSMSLLGSREH 117
Query: 115 LCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE-KAASAAVLPPG 173
+CVN +VL R TA +++ + C F+ ++ + + G
Sbjct: 118 MCVNPQVL------------RLPTAQAQQSMCNTLREEKNCRFYRGFQARNGHNTAMKDG 165
Query: 174 --VYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVV 231
V+ ++DL + G++ G+CPY+ R + A++V Y Y+ D + + ++ K S++
Sbjct: 166 RWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRKQLPFDL-KGSIL 224
Query: 232 VFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
+ DEAHN+ +V + ++++ L A + SR
Sbjct: 225 IVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSR 258
>gi|297743271|emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 445 VFDRFQSVVITSGTLSPID-----LYPRLLN--FHPVVSRSFKMSLTRDCICPMVLTRGS 497
+ D+ +V++ GTL PI+ L+P L + FH S + + I P+ L+ G
Sbjct: 523 IVDQAHAVILAGGTLQPIEETRERLFPWLTSDQFHFF---SCSHIIPPESILPVALSHGP 579
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
+ RS + G LL +V++VP+GIV FF S+ Y ++ W SGIL+
Sbjct: 580 SGQSFDFSYSSRSSSIMIEELGLLLCNLVTVVPEGIVVFFSSFDYEGQVHDAWKASGILE 639
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCG------------RGAVFFSVARGKVAEG 605
IM+ K VF E + + L Y++A D GA+ +V GK++EG
Sbjct: 640 RIMKKKCVFREPRKNTDVEFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEG 699
Query: 606 IDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRV 665
I+F GR ++M G+P+ LL R++Y+ + + ++ ++ Q +GR
Sbjct: 700 INFSDGMGRCIVMVGLPYPSPSDIELLERVKYI-EGLGHRGKEYYENLCMKAVNQSIGRA 758
Query: 666 IRSKADYGMMIFADKRYSRHD-KRS------KLPGWI 695
IR DY ++ D RY+ KRS KLP WI
Sbjct: 759 IRHINDYAAILLVDARYASDPLKRSFSHPTNKLPQWI 795
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+K+ +C+RT ++ + + EL+ G K++ +G SRK C+N VL N
Sbjct: 148 LKIYFCSRTHSQLSQFVKELR------KTIFGNEMKVVCLG--SRKISCINEEVLKLGNS 199
Query: 128 DSVDAAC------RKRTASWVRALAAENPNIET-----CEFFENY--EKAASAAVLPPGV 174
++ C +K+ S ++ L +E T C N+ +K + + G
Sbjct: 200 TRINERCLELQQNKKKEVSKLKNLGSEGRIRRTKASSGCPMLRNHKLQKQFRSEISQEGA 259
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL G++ G CPY+ +R ++ A++VV YQ LL + + K ++V+ D
Sbjct: 260 LDIEDLVHLGRRMGTCPYYGSRSIIPAADLVVLPYQSLLSKSSRESLGLNL-KNNIVIID 318
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
EAHN+ + I + LE S I Q ++RF+
Sbjct: 319 EAHNLADSLISMYDAKITSSQLEHVH---SHIKQYLQRFR 355
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE 65
FPY+ Y Q +M L R+L+ G +LE PTGTGKT++++ +++ + +
Sbjct: 12 FPYEP-YSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLVDRKQ 64
>gi|241950739|ref|XP_002418092.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
gi|223641431|emb|CAX43392.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
Length = 823
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRG 496
D S K + D+ + V++ GT+ P+ Y L P V + + C V+ +
Sbjct: 525 DPSAIFKEIVDQAKCVLLCGGTMEPMADYMDYL--FPTVPTNKINTFA----CGHVIPKE 578
Query: 497 S-DQLPVST--------KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
+ + PVS F R+DP + G+ L+E+ VP G+V FF SY Y+D+++
Sbjct: 579 NLEVFPVSQWNDTNFEFSFQKRNDPKQLTSLGEFLIEITKRVPYGVVIFFPSYKYLDQVL 638
Query: 548 ATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGR-GAVFFSVARGKVAEGI 606
W ++GIL I +K +F E D L Y R GA+ FSV GK++EGI
Sbjct: 639 QFWKNTGILSSIESNKTIFREPTDPSNVEKVLSQYGYIIQTERKGAMLFSVVGGKMSEGI 698
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----------DFLTFDAL 655
+F R VIM G+P+ S ++ + +++ +T +K G ++ +
Sbjct: 699 NFSDDLARAVIMVGLPYPNAYSGEMVTKRKFI-ETSVLKNGGTANDAREKSKNYYENLCM 757
Query: 656 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R Q +GR IR DY ++ D+R+S ++KL W+
Sbjct: 758 RAVNQSIGRSIRHVNDYSIIYLVDRRFSFPRIQNKLSQWV 797
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 65 ENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
E P+K+ + +RT ++ + ++L+L N+Q + I L SRK LC+N +V A
Sbjct: 199 ECPIKIFFSSRTHSQLNQFSSQLRLT-NFQASFEDLEERTKYIPLGSRKQLCINDKVRAK 257
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFF-ENYEKAAS----AAVLPPGVYTLQD 179
N SV+ AC L E C++ +NY + + A + + ++D
Sbjct: 258 GNDQSVNDACID--------LQRE---TNGCQYLPKNYMMSNATKEFADLSLAKIRDIED 306
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L G + CPY+ R + ++ YQ + I++ +++ +++ DEAHNI
Sbjct: 307 LNQLGTELNICPYYSVRKGIDMTEIISLPYQMIFQDTTRKILNLDIKDSIIII-DEAHNI 365
Query: 240 DNVCIEALSVSVRRQTLEGATRNL 263
+V S+ V L ++L
Sbjct: 366 IDVITSMYSIKVTSDQLNKVIKSL 389
>gi|320165089|gb|EFW41988.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 950
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLV 565
F R D V G+ L ++V+ VP+G+VCFF SY YM +++ W + +L+++ K V
Sbjct: 711 FRFRHDTRVMDELGRALCDIVAWVPEGVVCFFQSYDYMAKVLDRWRQTEVLQQVQLKKRV 770
Query: 566 FIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQY 625
F E + L Y + G GA+ F V GK++EGI+F GR V+M G+PF
Sbjct: 771 FQEPRVAGNVDSVLREYSECIRAGNGAILFCVVGGKLSEGINFSDGLGRCVVMVGLPFAN 830
Query: 626 TLSKILLARLEYLRDTFQIKE-------------------GDFLTFDALRQAAQCVGRVI 666
S L ++ YL + +++ +F +R Q +GR I
Sbjct: 831 MYSTELNEKMRYLNEQAKVRALASSKTNKLPPSFDETAAGEEFYLNLCMRAVNQSIGRAI 890
Query: 667 RSKADYGMMIFADKRYSRHDKRSKLPGWI 695
R DY ++ D R+ + ++KLP WI
Sbjct: 891 RHSKDYATILLLDHRFLQPHIQAKLPRWI 919
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + + E++ G K++ +G SRKNLCVN V E
Sbjct: 232 AKIYYCSRTHSQLNQFVQEVR------KSPFGETTKVVVLG--SRKNLCVNDDVRKLEAV 283
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQ 187
+ ++ C +R A+++ + C + N + + +++L GK+
Sbjct: 284 ERINERCDD-----LRKNASKSKEAKGCPYLTNDSVSTLRDSILVHTTDIEELVNRGKKM 338
Query: 188 GWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEAL 247
G C Y+ +R ++ A++V YQ LL + + + VV+ DEAHN+ +
Sbjct: 339 GACAYYASRRAIRAAHLVALPYQMLLHHSTREALGINLSNQ-VVIVDEAHNVMETLNDIY 397
Query: 248 SVSVRRQTLEGATRNLSRINQEIERF 273
SV++ + A S++ Q E++
Sbjct: 398 SVTITLAVIRAAQ---SQLEQYAEKY 420
>gi|70917979|ref|XP_733039.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56504467|emb|CAH85165.1| hypothetical protein PC301436.00.0 [Plasmodium chabaudi chabaudi]
Length = 126
Score = 118 bits (296), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/111 (46%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Query: 634 RLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPG 693
RL++L++T+ I+E +FLTFDA+RQA+QCVGR+IR+K DYG+MIF+D RY+R+DK+ KLP
Sbjct: 1 RLDFLKETYNIQENEFLTFDAMRQASQCVGRIIRNKKDYGIMIFSDIRYARNDKKGKLPP 60
Query: 694 WILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSIGRKTLLSQADLE 744
WI+ + +++NL+ + I+++FL M+Q Y + +T +SQ L+
Sbjct: 61 WIIKCMDVSNINLTIGAGVSISKKFLLNMSQEYKETD----QTKISQVILQ 107
>gi|268569974|ref|XP_002640663.1| C. briggsae CBR-DOG-1 protein [Caenorhabditis briggsae]
Length = 869
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 151/665 (22%), Positives = 263/665 (39%), Gaps = 84/665 (12%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILA-IGLSSRKNLCVNSRVLAAEN 126
V++ Y TRT ++ + + E L P A I+ L+SR C+N A
Sbjct: 227 VRIYYGTRTHKQIAQVVKEFSRL---------PYANIIKHTILASRDQSCINP---TARK 274
Query: 127 RDSVDAACRKRTASWVRALAAEN---PNIETCEFFENYEKAASAAVLPPGVYTLQDLRAF 183
+ + C++ ++ +N P E ++ V + + + A
Sbjct: 275 QPDISGYCKEINSAHGIGCQFKNAMRPRFEKASMLRSHLMDQGTMVF--DMEEIVETLAL 332
Query: 184 GKQQGWCPYFLA-RHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
Q CPYF R + Q A+++ + YL+DP + S K SVV+ DEAHNI++
Sbjct: 333 AYPQ-ICPYFSTNRILTQDADLIFCPFSYLVDPLIRNS-SDVHVKNSVVILDEAHNIEDT 390
Query: 243 CIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAW 302
C EA S + + L+ + + I+ + + E A ++P+A
Sbjct: 391 CREAASFTFTEKELDDSLLSFRLKRVAIDNITSNKSAE---------EAFA---DVPDA- 437
Query: 303 LSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVASITAH 362
I + G++ EH + R V+++ T ++
Sbjct: 438 --------SIHMKEFKGHLMYLEHLTLEILRWVRHVAEEARTPPKSRQ------------ 477
Query: 363 AGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICD--FATLVGTYTRGFSIIIEPFD 420
G+ KT E L S + EI D F T AT G T+ ++ D
Sbjct: 478 EGL--KTCTLSSETLFSSLTNAEI-GVDLFAPPNTPKHNAIATSFGAITKQNEPEMKEMD 534
Query: 421 ERMPH-----IPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVV 475
+ P + + L + + +P + +S+++ SGTL P+D L
Sbjct: 535 QFKPSATAIVVIEKWLYFQSYFGNQQYRPTYSETRSIILASGTLCPMDTLKTELGMEFKQ 594
Query: 476 SRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVA--RNYGKLLVEMVSIVPDGI 533
++ D I VL G ++ + SDP ++ + + VP GI
Sbjct: 595 QVEGDQVISPDNIFAAVLPIGPHGNRITCTYRNTSDPESPFYEEVASIVKYVCTNVPAGI 654
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC------- 586
+CF SY ++++ + + I K++ E + E + +D + +A
Sbjct: 655 LCFLPSYRVLEQLKMCMYKNQSMLHIKSKKVILFEPRRSSELSAVMDEFDEAIFNPTRFG 714
Query: 587 DCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQ--- 643
GA+ F+V RGKV+EGIDF R+VI G+P+ + + A+ Y +
Sbjct: 715 ATINGALMFAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKMYNDQNSKEMG 774
Query: 644 IKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR-------SKLPGWI 695
I GD + T A R Q +GR +R K D+G M+ D R R + +++ WI
Sbjct: 775 ILNGDEWYTTQAYRALNQALGRCLRHKNDWGAMLMIDDRLERQTSQLTTGASSARVSKWI 834
Query: 696 LSHLR 700
+ L+
Sbjct: 835 RAQLK 839
>gi|281208566|gb|EFA82742.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 997
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNF-HPVVSRSFKMSLTRDCI 488
V + + +A K + + +SV++TSGTLSP+ + L P+ + + +
Sbjct: 684 VFGIWSMNPRVAFKSISENTRSVILTSGTLSPLSSFASELGAPFPITAELGNLEDITKRV 743
Query: 489 CPMVLTRGSDQLPVSTKFDMRSDPGVARN-YGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
L G++ + F SD V ++ G +++ + ++PDG++ FF SY +MD++I
Sbjct: 744 WIGTLGFGANNTKLDATFK-SSDMLVFQDALGNAILKHIELIPDGVLVFFPSYFFMDKMI 802
Query: 548 ATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGID 607
W +G+ I + K +F E + + L++Y KA RG + FS+ RGKV+EGI+
Sbjct: 803 LRWKKTGVYDLIDRIKPIFTEPKFAKDFQPVLNDYNKAVQSKRGGLLFSIYRGKVSEGIN 862
Query: 608 FDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG-----DFLTFDALRQAAQCV 662
F + R VI+ G+P+ + + +Y + K+G + A R Q +
Sbjct: 863 FSDQFARGVIIIGIPYPNFKDLKIDLKKKY--NELNSKKGMMNGSSWYNLQAYRALNQAL 920
Query: 663 GRVIRSKADYGMMIFADKRYSRHDKRSKLPGW 694
GR IR K D+G ++ D+R++ + W
Sbjct: 921 GRCIRHKDDFGSILLIDERFTNPSLWTNFSKW 952
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 70 LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDS 129
+ +C+RT ++++ EL+ Y+ R + L SR CVNS++ E S
Sbjct: 322 IFFCSRTHSQIKQLTDELRKTP-YRPR---------MVVLGSRDQYCVNSKL---EGLYS 368
Query: 130 VDAACRKRTASWVRALAAENPNIETCEFF---ENYEKAASAAVLPPGVYTLQDLRAFGKQ 186
C+K + C F + Y A + P V+ ++D R GK+
Sbjct: 369 KKERCKKMVKD------------KECIFHRQSKTYNLATQFSGAPHQVWDIEDFRVAGKE 416
Query: 187 QGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEA 246
CPYF ++ MV AN++ Y Y++D + K+ S+V+FDEAHNI++ + A
Sbjct: 417 TRECPYFASKSMVPTANLIFCPYNYIIDMSIRSHF-KDKFTNSIVIFDEAHNIEDALMSA 475
Query: 247 LSVSVRRQTLE 257
S + R+ L+
Sbjct: 476 ASFDIVREDLQ 486
>gi|189211309|ref|XP_001941985.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978078|gb|EDU44704.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 850
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPR-LLNFHPVVSRSFKMSLTRDCICP----- 490
D + K + + ++VV+ GT+SP+ Y + LL++ + S M+L+ + P
Sbjct: 535 DPTFHFKEIVEEARAVVLAGGTMSPMSDYEQHLLSY---LEPSKIMTLSCGHVIPPSNLL 591
Query: 491 -MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIAT 549
+ + R S + F+ R+ + G ++ +PDG+V FF SY+Y+D IA
Sbjct: 592 AVPVMRTSGGVEFDFTFENRNKEMTMIDLGTAILNFSQHIPDGLVVFFPSYAYLDTCIAA 651
Query: 550 W-------NDSGILKEIMQHKLVFIETQD--------------VVETTLALDNYRKACDC 588
W + + Q K VF+E + V + L+ + A
Sbjct: 652 WKRIKPSASKATFWDGFTQSKPVFLEQRSQQQASDQVPASKDAAVASVLSAYSAAIASGN 711
Query: 589 GRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG- 647
GRGA+ F+V G ++EGI+F GR V++ G+PF S A+++Y+ T K G
Sbjct: 712 GRGALLFAVIGGTLSEGINFSNALGRGVVVVGLPFPNAQSAEWKAKMQYIA-TKTAKNGG 770
Query: 648 -------DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
DF +R QCVGR IR K DY ++ D+RY + KLP WI L
Sbjct: 771 DGKAAARDFYENACMRAVNQCVGRAIRHKGDYAAILMLDRRYGSRRIQDKLPKWIRGSL 829
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELK------LLHNYQTRHLGPAAKILA----IGLSSRKNL 115
+ K+ +C+RT ++ + +EL + + T + G ++ + L SRKNL
Sbjct: 198 DETKIFFCSRTHSQLTQFSSELGRVKMPPAIASDDTENGGGIESLVEDVKHLTLGSRKNL 257
Query: 116 CVNSRVLAAENRDSVDAACRK-RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV 174
C+NS+V E+ +++ C + + +S P E+ ++ A A +
Sbjct: 258 CINSQVNRLESATAINERCLELQQSSVAETRCPHMPTKESEPLINDFRDHALAK-----I 312
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL + GK+ G +V Y LL + + ++ +V+ D
Sbjct: 313 RDIEDLGSLGKKLG---------------IVTLPYPLLLQRSAREALGISL-RDHIVIID 356
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
EAHN+ + SVSV TLE + +++ +++F+ G+ R
Sbjct: 357 EAHNLMDAIAGIYSVSV---TLEQVQQARTQLTVYLQKFRNKLKGKNR 401
>gi|12324581|gb|AAG52242.1|AC011717_10 hypothetical protein; 30600-24965 [Arabidopsis thaliana]
Length = 959
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 19/269 (7%)
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
S+++TSGTLSP+D + L + ++ + + V++ G +++ + R
Sbjct: 480 SIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSNQLWAGVVSTGPSGYVLNSSYRNRD 539
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHKL 564
P + G +V +VP+G++ FF SY MD I W N + + I + K
Sbjct: 540 VPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTVWERICKLKK 599
Query: 565 VFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
IE +D A+ ++ + G VFF+V RGKV+EG+DF GR V++ G+P
Sbjct: 600 PVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAGRAVVITGLP 659
Query: 623 FQYTLSKILLARLEYLRDTFQIKE-----------GDFLTFDALRQAAQCVGRVIRSKAD 671
+ + + E+L + Q+ + + + +A R Q +GRVIR + D
Sbjct: 660 YARVTDPRVKLKREFLDEQSQLADVKLPRSTLLSGSMWYSQEAARAVNQAIGRVIRHRHD 719
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLR 700
YG +IF D R+ + ++SK+ WI +++
Sbjct: 720 YGAIIFCDDRFEQPSQQSKISLWIRPNVK 748
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 63/282 (22%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+ + + V FP++ Y Q YM + +L K H LLE PTGTGKT+ LL ++
Sbjct: 49 YSIRGINVEFPFE-AYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWRKS 107
Query: 60 ---------------VLSKPENPVK------------LIYCTRTVHEMEKTLAELKLLHN 92
S + P+ ++Y +RT ++ + + ELK +
Sbjct: 108 LGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKR-SS 166
Query: 93 YQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAEN 149
Y+ K++ +G SR+ LCVN V + + +A C+KR
Sbjct: 167 YR-------PKMVVLG--SREQLCVNEEVNSLRGKALTNACQYLCKKRGK---------- 207
Query: 150 PNIETCEFFE---NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
C F +Y K P ++DL GK G CPY++ R + + +++
Sbjct: 208 ---RQCNHFNRLPDYLKHNPHIGDEP--VDIEDLVNIGKDSGPCPYYITRELHKDVDIIF 262
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
Y YL+ + K SV++FDEAHN++++C ++ S
Sbjct: 263 APYNYLISNGYRKFL-KVNWTNSVLIFDEAHNLESLCADSAS 303
>gi|426227064|ref|XP_004007648.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DDX11-like protein 8-like [Ovis aries]
Length = 884
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 27/264 (10%)
Query: 445 VFDRFQSVVITSGTLSPIDLYPRLL------NFHPVVSRSFKMSLTRDCICPMVLTRGSD 498
V ++V+I GT+ P+ + L VV S + D I P+++ G
Sbjct: 607 VVKECRAVIIAGGTMQPVSNFREQLLAGAGVEAERVVEFSCGHVIPPDHILPLIICSGPS 666
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ + R P + G++L + ++VP G+VCFF SY Y ++ A W SG+L
Sbjct: 667 NQMLDFTYQKRGLPQMMDETGRILCNLCNVVPGGVVCFFPSYEYQHQVCAHWEKSGLLAR 726
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + L Y + CG+ GA+ SV GK++EGI+F
Sbjct: 727 LTIRKRIFQEPKKANRVEQVLLEYSRCIKHCGQARGTETGALLLSVVGGKMSEGINFSDD 786
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKAD 671
GR V+M G+P+ +S L ++ YL D + A IR + D
Sbjct: 787 LGRCVVMVGMPYPNIMSPELQEKMAYL--------------DQMLPRAPSHHGAIRHQKD 832
Query: 672 YGMMIFADKRYSRHDKRSKLPGWI 695
+ ++ D+RY+ ++KLP WI
Sbjct: 833 FASIVLLDQRYASPAIQAKLPAWI 856
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 24/225 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
K+ YC+RT ++ + +H Q G +++++G SR+NLCVN V +
Sbjct: 224 TKIYYCSRTHSQL------AQFVHEVQKSPFGQDTRLVSLG--SRQNLCVNGDVRKLGSV 275
Query: 128 DSVDAAC--------RKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQD 179
++ C +++ + C F+ + + GV ++
Sbjct: 276 QLINDRCVEMQRSKHERKSITEEEEPTRRRRRXAPCPFYSHERLQLLRDEVLAGVKDVEQ 335
Query: 180 LRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
L A GK+ CPY+ R + A +VV YQ LL +Q + VVV DEAHN+
Sbjct: 336 LVALGKEARACPYYGGRFAIPAAQLVVLPYQMLLHAPTRQAAGIRLQGQ-VVVIDEAHNL 394
Query: 240 DNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAE 284
+ S+ VR L A S++ Q ER+ RL+A+
Sbjct: 395 IDTITNIHSMEVRGSQLCQAH---SQLLQYTERY----GKRLKAK 432
>gi|348687642|gb|EGZ27456.1| hypothetical protein PHYSODRAFT_554000 [Phytophthora sojae]
Length = 1025
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 18/285 (6%)
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFH-PVVSRSFKMSLTRDCICPMVL 493
C +A++A + + +SV++TSGTLSP++ + L P+ + + R + +
Sbjct: 630 CLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAV 689
Query: 494 TRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
G + + + ++ + DP + G+LL++ +P GI+ FF SYS ++++ W +
Sbjct: 690 MHGPGNVDLQSTYNNQQDPRYQDSMGQLLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKT 749
Query: 554 GILKEIMQHKLVFIETQDVVETTLA-LDNYR-----------KACDCGRGAVFFSVARGK 601
+ EI Q K V+ E ++ + A L++Y+ +A D GA+F +V RGK
Sbjct: 750 KLWGEIEQFKTVYSEPRNAGKDFDALLEDYKDTITKCTAEGDEAQDKKSGAIFLAVYRGK 809
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLS-KILLARL---EYLRDTFQIKEGD-FLTFDALR 656
V+EGIDF R V+ G+PF ++ L R E R ++ G + A R
Sbjct: 810 VSEGIDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHVWYHLQAFR 869
Query: 657 QAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRD 701
Q +GR IR + DYG ++ D R+ + L W+ ++++
Sbjct: 870 ALNQALGRCIRHRQDYGAIMLLDSRHRFNKHTKSLSKWMRPYIQE 914
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 67 PVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGP-------AAKILAIGLSSRKNLCVNS 119
P ++ +C+RT ++ + + ELK N +L ++ L S++N+CVN
Sbjct: 262 PPRIYFCSRTHSQLAQVVDELK---NCPVSYLDSPEDSNTYTKQLQTCVLGSKRNMCVNR 318
Query: 120 RVLAAENRD--SVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTL 177
+V NRD VD CR LA E +C +F+ +KA P V+ +
Sbjct: 319 KV----NRDPSQVDEKCR---------LALEG---ASCSYFKKRKKANDLRRHVPPVWDI 362
Query: 178 QDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAH 237
+DL ++ C YF AR + AN+V Y YLLDP + + + K+S++V DEAH
Sbjct: 363 EDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPSIREAVGITL-KDSIIVLDEAH 421
Query: 238 NIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDA 278
N+++ C + SV V + L + + S + + R K+ +A
Sbjct: 422 NVEDTCRSSASVEVTTEVLAASIKAFSIVIKHGNRPKSYNA 462
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 3 FKLEDVTVYFPYDN-IYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL 53
F + V FP +P Q++ M ++ AL + H LLE PTG+GKT+ALL
Sbjct: 22 FMIMGYNVEFPRGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALL 73
>gi|42563365|ref|NP_178113.3| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
gi|332198212|gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
Length = 1040
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 19/269 (7%)
Query: 451 SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 510
S+++TSGTLSP+D + L + ++ + + V++ G +++ + R
Sbjct: 484 SIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSNQLWAGVVSTGPSGYVLNSSYRNRD 543
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW------NDSGILKEIMQHKL 564
P + G +V +VP+G++ FF SY MD I W N + + I + K
Sbjct: 544 VPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTVWERICKLKK 603
Query: 565 VFIETQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVP 622
IE +D A+ ++ + G VFF+V RGKV+EG+DF GR V++ G+P
Sbjct: 604 PVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAGRAVVITGLP 663
Query: 623 FQYTLSKILLARLEYLRDTFQIKE-----------GDFLTFDALRQAAQCVGRVIRSKAD 671
+ + + E+L + Q+ + + + +A R Q +GRVIR + D
Sbjct: 664 YARVTDPRVKLKREFLDEQSQLADVKLPRSTLLSGSMWYSQEAARAVNQAIGRVIRHRHD 723
Query: 672 YGMMIFADKRYSRHDKRSKLPGWILSHLR 700
YG +IF D R+ + ++SK+ WI +++
Sbjct: 724 YGAIIFCDDRFEQPSQQSKISLWIRPNVK 752
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 63/282 (22%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
+ + + V FP++ Y Q YM + +L K H LLE PTGTGKT+ LL ++
Sbjct: 49 YSIRGINVEFPFE-AYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWRKS 107
Query: 60 ---------------VLSKPENPVK------------LIYCTRTVHEMEKTLAELKLLHN 92
S + P+ ++Y +RT ++ + + ELK +
Sbjct: 108 LGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKR-SS 166
Query: 93 YQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAA---CRKRTASWVRALAAEN 149
Y+ + + L SR+ LCVN V + + +A C+KR
Sbjct: 167 YRPK---------MVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGK---------- 207
Query: 150 PNIETCEFFE---NYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
C F +Y K P ++DL GK G CPY++ R + + +++
Sbjct: 208 ---RQCNHFNRLPDYLKHNPHIGDEP--VDIEDLVNIGKDSGPCPYYITRELHKDVDIIF 262
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
Y YL+ + K SV++FDEAHN++++C ++ S
Sbjct: 263 APYNYLISNGYRKFL-KVNWTNSVLIFDEAHNLESLCADSAS 303
>gi|169625336|ref|XP_001806072.1| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
gi|160705637|gb|EAT76778.2| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
Length = 1396
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 36/297 (12%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP------ 490
D + K + + ++VV+ GT+SP+ Y + L P + + M+L+ + P
Sbjct: 537 DPTYHFKDIVEEARAVVLAGGTMSPMSDYEQHL--LPYLDSTKIMTLSCGHVIPPTNLLA 594
Query: 491 MVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW 550
+ + R S F+ R+ + G ++ +PDG+V FF SYSY+D IA W
Sbjct: 595 IPVVRASSGNEFVFTFENRNKERTMIDLGHAILGTAQHIPDGVVVFFPSYSYLDACIAAW 654
Query: 551 -------NDSGILKEIMQHKLVFIE--------TQDVVETTLALDN----YRKACDCGRG 591
+ Q K +F+E TQ V A+D+ Y A G G
Sbjct: 655 KRLAAAGSKVTFWDRFTQTKPIFLEQRSQPNVATQPVANKEAAVDSVLTAYSTAIASGNG 714
Query: 592 --AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD- 648
A+ F+V G ++EGI+F GR V++ G+PF S A+++Y+ + GD
Sbjct: 715 CGALLFAVIGGTLSEGINFSDALGRGVVVVGLPFPNPHSAGWKAKMQYISTKENKRGGDG 774
Query: 649 ------FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
F +R QCVGR IR K DY ++ D+RY + KLP WI L
Sbjct: 775 KAAARDFFENACMRAVNQCVGRAIRHKGDYAAIMMLDRRYGTKRIQDKLPKWIRGSL 831
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLL----------HNYQTRHLGPAAKILAIGLSSRKNL 115
+ K+ +C+RT ++ + +EL + + L K L +G SRKNL
Sbjct: 199 DETKIFFCSRTHSQLTQFTSELGRVKMPPAITPDDQDADVDRLVDDVKHLTLG--SRKNL 256
Query: 116 CVNSRVLAAENRDSVDAACRK-RTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGV 174
C+NS+V N +++ C + + A+ PN E+ ++ A A +
Sbjct: 257 CINSKVSRLGNATAINERCVELQQATSAEGKCPHMPNKESETLVNDFRDHALAK-----I 311
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL A GK+ G CPY+ +R +Q L K VV+ D
Sbjct: 312 RDIEDLGALGKKLGVCPYYASRPAIQHCESTARDALGL------------SLKNHVVIID 359
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLR 282
EAHN+ + SVSV TL+ + +++ +++F+ G+ R
Sbjct: 360 EAHNLMDAIAGIYSVSV---TLDQVQQARAQLTMYLQKFRNKLKGKNR 404
>gi|268574822|ref|XP_002642390.1| Hypothetical protein CBG18394 [Caenorhabditis briggsae]
Length = 834
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 11/253 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLN---FHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVST 504
++ V+ GT+ P +L L+ P R F + + + + + + D P
Sbjct: 559 RATVLVGGTMEPSELLVETLSRGSVGPDAIRRFSCAHVINDSQLLAVTIQKTVDGKPFQL 618
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
+ R +P ++ G+ L + +P+G+V F SY + ++I ++ I+++I + K
Sbjct: 619 TYKTRQNPETLKSIGRTLQVLSQHIPNGVVIFVPSYEILTDLIKKMKETKIMEQIGRKKS 678
Query: 565 VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
VF ET+ T L+ +Y A RGA+ F+V GK++EGI+F GR VI+ G+P+
Sbjct: 679 VFAETRQSSSTMLS--DYSTAAKSSRGAILFAVMGGKMSEGINFSDELGRAVIVIGLPYP 736
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDA--LRQAAQCVGRVIRSKADYGMMIFADKRY 682
L R+ +L Q+ G + +++ + Q +GR IR + DY + D RY
Sbjct: 737 NKTGVELRERMRFLDS--QMANGGNMLYESMCMHSVNQSIGRAIRHRKDYAAVYLFDDRY 794
Query: 683 SRHDKRSKLPGWI 695
+ +SKL WI
Sbjct: 795 ALESTKSKLSAWI 807
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 65 ENP--VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVL 122
E+P +K+ Y +RT ++E+ + EL +Q R + SSR NLCVN V
Sbjct: 178 ESPKCLKIFYASRTHSQLEQLVDELGKTR-FQPR---------VVTCSSRGNLCVNEEVK 227
Query: 123 AAENRDSVDAAC----RKRTASWVRALAAENPN-------IETCEFFENYE-KAASAAVL 170
+ ++ C + T+ + E+ ++CEF+ + + + VL
Sbjct: 228 KLKLNHLINEKCMELRKNGTSDKDKKQKTEDGGEKKKKSCSKSCEFYSSTQIEDLVNGVL 287
Query: 171 PPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESV 230
+ T + G CPYF +R V +V+ YQ LL ++ K++V
Sbjct: 288 ANKLKTTIQVTKEGVSSKGCPYFASRKAVPQCQLVLLPYQVLLHEGTRNAWGIDL-KDNV 346
Query: 231 VVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE-RFKATD 277
+V DEAHN+ S + ++L A R + N + + R KA +
Sbjct: 347 IVLDEAHNVLTTINSLYSAEISEKSLSLALRLIREYNAKYKLRLKAKN 394
>gi|398019061|ref|XP_003862695.1| helicase, putative [Leishmania donovani]
gi|322500925|emb|CBZ36002.1| helicase, putative [Leishmania donovani]
Length = 953
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 25/256 (9%)
Query: 449 FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDM 508
SV++TSGTLSP+D + L V + D + VL RG ++ F
Sbjct: 435 LHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPDQVLGGVLCRGPSGEKLNGGFSF 494
Query: 509 RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS-----------GILK 557
RS G L + P G + FF SY+ M+ ++ W G+L
Sbjct: 495 RSSVDYRVGLGMSLANIARNTPGGTLVFFPSYASMNSVVELWQAGSGRAGDTKTVWGMLS 554
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGKVAEGIDFDRHYGRL 615
E+ K +F+E + + + +++K D RGA+ +V RGK++EGIDF ++GR
Sbjct: 555 EL---KPIFVEPSNSNDLPTIVQSFQKEVDTSPLRGAILLAVCRGKISEGIDFADNHGRC 611
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIK---EGDFLTFD------ALRQAAQCVGRVI 666
V++ G+P+ + + +Y+ + G T D A+R QCVGRVI
Sbjct: 612 VLVAGIPYANHTDLFVRLKRDYITSVAPQRPLVHGKLFTGDDWYRNEAMRAVNQCVGRVI 671
Query: 667 RSKADYGMMIFADKRY 682
R K DYG+++ AD+R+
Sbjct: 672 RHKDDYGVVLLADERF 687
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 42/258 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+ +TV FP++ YP Q +M + + L + LLE PTGTGKT+ LL ++ +
Sbjct: 7 VSGITVSFPFEP-YPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLAATS 65
Query: 65 ENPV-----------------KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAI 107
+ V K++YC+RT ++ + + ELK Q +A+
Sbjct: 66 QGAVLRHTSDQDQKGRGKYNHKVVYCSRTHAQLTQVVRELKRTSYAQ-------CFTMAV 118
Query: 108 GLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY-EKAAS 166
L SR+++C+N V + + A C AL +E C FF AA
Sbjct: 119 -LGSREHMCLNKEVTRLPSSQAQHAMCS--------ALRSER----NCRFFRGLLSAAAG 165
Query: 167 AAVLPP--GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKE 224
A++L P V+ ++DL G + G+CPYF R + A+VV+ Y Y+LDP + + E
Sbjct: 166 ASLLSPECAVHDMEDLMREGSRSGFCPYFHERDAAKDADVVLMPYNYVLDPSLHKQLPFE 225
Query: 225 MQKESVVVFDEAHNIDNV 242
+ + +++ DEAHN+ +V
Sbjct: 226 L-ADCILIVDEAHNLPSV 242
>gi|146093363|ref|XP_001466793.1| putative helicase [Leishmania infantum JPCM5]
gi|134071156|emb|CAM69841.1| putative helicase [Leishmania infantum JPCM5]
Length = 953
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 25/256 (9%)
Query: 449 FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDM 508
SV++TSGTLSP+D + L V + D + VL RG ++ F
Sbjct: 435 LHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPDQVLGGVLCRGPSGEKLNGGFSF 494
Query: 509 RSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS-----------GILK 557
RS G L + P G + FF SY+ M+ ++ W G+L
Sbjct: 495 RSSVDYRVGLGMSLANIARNTPGGTLVFFPSYASMNSVVELWQAGSGRAGDTKTVWGMLS 554
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVFFSVARGKVAEGIDFDRHYGRL 615
E+ K +F+E + + + +++K D RGA+ +V RGK++EGIDF ++GR
Sbjct: 555 EL---KPIFVEPSNSNDLPTIVQSFQKEVDTSPLRGAILLAVCRGKISEGIDFADNHGRC 611
Query: 616 VIMFGVPFQYTLSKILLARLEYLRDTFQIK---EGDFLTFD------ALRQAAQCVGRVI 666
V++ G+P+ + + +Y+ + G T D A+R QCVGRVI
Sbjct: 612 VLVAGIPYANHTDLFVRLKRDYITSVAPQRPLVHGKLFTGDDWYRNEAMRAVNQCVGRVI 671
Query: 667 RSKADYGMMIFADKRY 682
R K DYG+++ AD+R+
Sbjct: 672 RHKDDYGVVLLADERF 687
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 42/258 (16%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKP 64
+ +TV FP++ YP Q +M + + L + LLE PTGTGKT+ LL ++ +
Sbjct: 7 VSGITVSFPFEP-YPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLAATS 65
Query: 65 ENPV-----------------KLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAI 107
+ V K++YC+RT ++ + + ELK Q +A+
Sbjct: 66 QGAVLRHTSDQDQKGRGKYNHKVVYCSRTHAQLTQVVRELKRTSYAQ-------CFTMAV 118
Query: 108 GLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENY-EKAAS 166
L SR+++C+N V + + A C AL +E C FF AA
Sbjct: 119 -LGSREHMCLNKEVTRLPSSQAQHAMCS--------ALRSER----NCRFFRGLLSAAAG 165
Query: 167 AAVLPP--GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKE 224
A++L P V+ ++DL G + G+CPYF R + A+VV+ Y Y+LDP + + E
Sbjct: 166 ASLLSPECAVHDMEDLMREGSRSGFCPYFHERDAAKDADVVLMPYNYVLDPSLHKQLPFE 225
Query: 225 MQKESVVVFDEAHNIDNV 242
+ + +++ DEAHN+ +V
Sbjct: 226 L-ADCILIVDEAHNLPSV 242
>gi|159485656|ref|XP_001700860.1| hypothetical protein CHLREDRAFT_113235 [Chlamydomonas reinhardtii]
gi|158281359|gb|EDP07114.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 273
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 19/251 (7%)
Query: 450 QSVVITSGTLSPID-LYPRLL-NFHPVVSRSFKMS-LTRDC-ICPMVLTRGSDQLPVSTK 505
+SVV+ SGTLSP+ L +LL P R F + C + +V RG LP+
Sbjct: 20 RSVVLASGTLSPVQGLVAQLLPAVPPWRLRHFACGHVVPACQLAALVAARGPTGLPLQLS 79
Query: 506 FDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLV 565
R +P V G+LLV + + VP G+V F S++Y+D+++ W +G+ + K V
Sbjct: 80 HGRRGEPRVMEELGRLLVNICTAVPAGVVVFAPSFAYLDQLVCAWQRTGVYGALASRKRV 139
Query: 566 FIETQDVVETTLALDNYRKACDCGR-----------GAVFFSVARGKVAEGIDFDRHYGR 614
F+E + + + C C + GA+ SV GK++EGI+F GR
Sbjct: 140 FVEPRTAGQVA-PVQLCAAVCRCAQGVAAAPRRRLTGALLLSVVGGKLSEGINFGDDLGR 198
Query: 615 LVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDA---LRQAAQCVGRVIRSKAD 671
V++ G+P+ L R+ +L + + + + ++ QCVGRVIR D
Sbjct: 199 CVVVLGLPYPNPSDPELRERMRFLDEAAAVAAAPAAAYYSGLCIKAVNQCVGRVIRHARD 258
Query: 672 YGMMIFADKRY 682
Y ++ D+RY
Sbjct: 259 YAAVVLVDERY 269
>gi|47212324|emb|CAF91262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1212
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 63/321 (19%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L+ VTV FP+ Y Q YM ++ L+ K + +LE PTGTGKT+ LL
Sbjct: 6 LDGVTVQFPF-APYACQREYMRKVIECLEQKTNGVLESPTGTGKTLCLLCSALAWREQLK 64
Query: 54 SLITSYVLSKP--------------------------ENPVKLIYCTRTVHEMEKTLAEL 87
I+S ++ + + K+IY +RT ++ + + EL
Sbjct: 65 DKISSKMMERRLGGETSHSTGLASWGSAAADGEAAYYTDIPKIIYASRTHSQLAQVIKEL 124
Query: 88 KLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAA 147
K N R KI +G SR+ LC+N V+ E+ CRK+ ++
Sbjct: 125 K---NTAYR-----PKICVLG--SREQLCINPEVMRQESSHVKVHMCRKKVST------- 167
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+C F+ N E++++ L + ++DL FG ++ CPY+L+R + Q A+V+
Sbjct: 168 -----RSCPFYNNTEESSTDRDLTHSILDVEDLVKFGNKKRVCPYYLSRSLKQEADVIFM 222
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
Y YL+DPK + E+ +VV+FDEAHN++ C E+ S + + A + R+
Sbjct: 223 PYNYLVDPKSRRAHNIELNG-AVVIFDEAHNLEKTCEESTSFDLTPYEVASAIAAVDRL- 280
Query: 268 QEIERFKATDAGRLRAEYNRL 288
+E+ KAT AG AE L
Sbjct: 281 -LVEQVKATGAGGTLAEDGSL 300
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 85/345 (24%)
Query: 452 VVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMR-- 509
V++TSGTLSP+D + + V + RD I V+ RG D + +S+ FD R
Sbjct: 457 VILTSGTLSPLDSFTSEMRIDFPVRLENGHVIERDQIFVSVVDRGPDGVQLSSAFDRRFL 516
Query: 510 --SD-----------------------PGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
D P + G + + +VP G++ FF S+ M+
Sbjct: 517 LHPDMLHLTGSQAQLRSLSLFFCGRFLPENMASLGNTVANLSRVVPHGLLVFFPSFPLME 576
Query: 545 EII------------ATWNDS---------GILKEIMQHKLVFIE--------------- 568
+++ A+W +S G + I K +F+E
Sbjct: 577 KVLDFWRVSGDGGSPASWCESSSPLAPQAHGHAERIDALKPIFVEPKGKANFSEASGRAE 636
Query: 569 TQDVVETTLALDNYRKACD--CGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
T + + +D Y + +G FF+V RGK +EG+DF +GR V++ G+PF
Sbjct: 637 TDSLFSISQVMDGYYNKVNDPQTKGGSFFAVCRGKASEGLDFADAFGRAVVITGLPFPPR 696
Query: 627 LSKILLARLEYLRD-----TFQIKEG-------DFLTF------DALRQAAQCVGRVIRS 668
+ ++ ++++L + T ++K FL+ A R Q VGRVIR
Sbjct: 697 MDPRVILKMQFLDEMNASKTSKMKPAVAFRVLVQFLSGQQWYRQQAFRAVNQAVGRVIRH 756
Query: 669 KADYGMMIFADKRYSRHDKRSKLPGWILS--HLRDAHLNLSTDMA 711
+ D+G + D R+ + R++LP W+ HL D+ ++ D++
Sbjct: 757 RHDFGAIFLCDHRFKNPEARAQLPSWLKPCVHLCDSFGSVIRDVS 801
>gi|240102854|ref|YP_002959163.1| DNA repair helicase [Thermococcus gammatolerans EJ3]
gi|239910408|gb|ACS33299.1| DNA repair helicase, ERCC2/XPD/rad3/TFIIH helicase beta
subunit-like protein (rad3) [Thermococcus gammatolerans
EJ3]
Length = 640
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 172/715 (24%), Positives = 298/715 (41%), Gaps = 118/715 (16%)
Query: 11 YFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVKL 70
Y PY+ P Q ++ ++ A++ + ++E PTG GKT+++L+ + E K+
Sbjct: 6 YLPYEP-RPHQLEFIELVRGAVERGENVIIEAPTGFGKTVSVLAGVLPVA---KELGFKV 61
Query: 71 IYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSV 130
+Y RT +M++ + ELK ++ A++ + + SRK LC+++ L D+
Sbjct: 62 LYLARTHRQMDRVIEELKAINR--------KARVSGVEMRSRKELCLHN-YLREYTSDAY 112
Query: 131 DA--ACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVL-------PPGVYTLQDLR 181
A C+ S C+F+EN +K + PG ++
Sbjct: 113 TAMVVCKNLRKSG------------KCQFYENEKKKKAEVEELTRFFLETPG--HPAEIL 158
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KESVVVFDEAHN 238
+ + CPY + R + A+V+V SY Y L+P + + + +V+FDEAHN
Sbjct: 159 NYAETLEVCPYDVTRMIAYKADVIVASYLYALNPTIRENFMTYLDLDYSDLIVIFDEAHN 218
Query: 239 IDNVCIEALSVSVRRQTLEGATRNLSRINQ-EIERFKATDAGRLRAEYNRLVEGLALRGN 297
+ + I ALS + T+ A + + EI F + L Y+ E L
Sbjct: 219 LPDQAISALSDRMSIHTVNRAIKEADEYREHEIANFLSIFGKGLEILYS---EKLG---- 271
Query: 298 LPNAWLSNPALPSDILKEAVPGNIRRAEHFLHVL----RRLVQYLRGRLETENVEKEGPV 353
S + I E V G H ++VL R LV+ L + + +E +
Sbjct: 272 ------SRDVEETPIAPELVFG------HVMNVLGLDTRWLVKTLNEMVAVGDSIREDRI 319
Query: 354 SFVASITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFS 413
+ ++ G + F L+L L + D++L + T RG S
Sbjct: 320 NKNKPPRSYIG---RVGEF-------LLLWLSLIGRDDYLFLL----------TRERGLS 359
Query: 414 IIIEPFDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHP 473
L+L D S A+ + D QS V SGTL+P++ + +++
Sbjct: 360 -----------------LELVALDPSKALTFIRD-VQSAVFMSGTLTPLEAFRDVMDIEN 401
Query: 474 VVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGI 533
+ F + R+ +V VST+ + RS + R + +VE V ++P +
Sbjct: 402 ARLKKFPRMVKRENAQVLVAK------DVSTRGEERS-LDLYRRMTEYIVEAVKLIPKNV 454
Query: 534 VCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDV--VETTLALDNYRKACDCGRG 591
F SY + +++ N L+E K +FIE Q E + ++ KA G G
Sbjct: 455 GVFTASYEVLQGLLSA-NLQVRLEE--TGKAIFIERQGTSSAENDAMVASF-KAHARGNG 510
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLT 651
AV V G+ +EG D+ VI+ G+P+ ++ A++ Y F K G +
Sbjct: 511 AVLLGVMGGRNSEGQDYSGDEMNGVILVGIPYARPTPRV-QAQIRYFERKFPGK-GRYYG 568
Query: 652 F--DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHL 704
+ A R+ Q GRV RS + G +I D R + R P W++ ++ L
Sbjct: 569 YYLPAHRKLVQAAGRVHRSAEEKGSIIILDYRVLWRNVRKDFPDWMVETMKPVDL 623
>gi|195432086|ref|XP_002064057.1| GK19963 [Drosophila willistoni]
gi|194160142|gb|EDW75043.1| GK19963 [Drosophila willistoni]
Length = 848
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 126/265 (47%), Gaps = 6/265 (2%)
Query: 445 VFDRFQSVVITSGTLSPID-LYPRLLN--FHPVVSRSFKMSLTRDCICPMVLTRGSDQLP 501
+ ++ +++VI GT+ P + L +L VV R + + D + P +T+G
Sbjct: 567 IVNQARAIVIAGGTMKPTEELIEQLFANCTERVVERFYDHVVPPDAVLPFAITKGPTGTN 626
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ + R + +L + ++P G+VCF SY Y+D++ G L I +
Sbjct: 627 LCFNYTQRGSSKMLTELSMILQNLCQVLPHGLVCFLPSYDYLDQVYKHLEQCGALARIAK 686
Query: 562 HKLVFIETQ--DVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMF 619
K +F E+ VE L L + + GA+ SV GK++EG++F + GR VI+
Sbjct: 687 RKRIFRESSGGGSVEQLLQLYAEAISSEDNGGALLLSVVGGKLSEGLNFADNLGRGVIVV 746
Query: 620 GVPFQYTLSKILLARLEYLRDTFQIKEG-DFLTFDALRQAAQCVGRVIRSKADYGMMIFA 678
G+P+ S L R+ +L + G ++ ++ QC+GR +R DY +
Sbjct: 747 GLPYPNRTSPELQERMRHLDEKLGPGAGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLL 806
Query: 679 DKRYSRHDKRSKLPGWILSHLRDAH 703
D+RY+ + KLP WI H+ A+
Sbjct: 807 DERYAAERIQQKLPRWIARHMVTAN 831
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 66 NPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAE 125
P+++ YC+RT ++ + ++EL+ +T H + + +I L SR+ LC+N V
Sbjct: 190 QPIQIFYCSRTHSQLSQIVSELR-----KTSH---SQWVRSISLGSRQQLCINPHVKRLS 241
Query: 126 NRDSVDAACRKRTASWVRALAAENPNIET-----CEFF--ENYEKAASAAVLPPGVYTLQ 178
+ ++ C S +A ++ +E C F + A+ P ++
Sbjct: 242 SVSLMNERCLDMAKSKTKANPSKKSRLEISSSGGCAFKVPTQVDHLRDLALSEP--VDIE 299
Query: 179 DLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHN 238
DL G+ CPY+ +R Q A +++ YQ LL + E+ S+V+ DEAHN
Sbjct: 300 DLVNQGQTARACPYYASRLAQQKAQLILLPYQLLLQKSARQQLGIEISG-SIVIIDEAHN 358
Query: 239 I 239
+
Sbjct: 359 L 359
>gi|383856223|ref|XP_003703609.1| PREDICTED: Fanconi anemia group J protein-like [Megachile
rotundata]
Length = 935
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLN--FHPVVSRSFKMSLTRDC 487
L+L C + + +P+ + +++ SGTL+P Y LN F +++ + ++
Sbjct: 631 TLKLICMNPGVIFEPLSRSVRCIILASGTLTPTASYQSELNTTFSHILNAGH--VIPKEQ 688
Query: 488 ICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
+ +++G + + + + + G G +L+ + +P G++CFF SY+ M +
Sbjct: 689 VYATCISKGPNGIQLRANYQTVNSWGFQDELGLVLLRICESIPHGVLCFFSSYNVMYKQT 748
Query: 548 ATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRK------ACDCGR--GAVFFSVAR 599
W + EI + K VF+E + E ++ YR+ A G+ G +F +V R
Sbjct: 749 ERWKHTSTWNEISRIKRVFVEPRHGSELEFIMNEYREVIENTSAGPIGKINGGLFLAVYR 808
Query: 600 GKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEY---------LRDTFQIKEGDFL 650
GKVAEGIDF + R V+ G+PF ++ + +Y LR T ++
Sbjct: 809 GKVAEGIDFKDNEARCVVCVGIPFPVRKDPVIDMKFKYNDANTAKGLLRGT------EWY 862
Query: 651 TFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWI 695
+ A R Q +GR +R D+G +I D+R+ + ++ LP W+
Sbjct: 863 SIQAFRALNQALGRCLRHINDWGAVILVDERFLLPEYKANLPKWV 907
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 64/290 (22%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY-------- 59
+ V FP Y Q + M ++ + +CLLE PTGTGKT+ALL + ++
Sbjct: 200 IKVKFPA-KPYSCQMAVMNKVIQGCVKSENCLLESPTGTGKTLALLCSVLAWHDHHSDVN 258
Query: 60 ------------------------VLSKPENPVK------LIYCTRTVHEMEKTLAELKL 89
L K + P K + Y TRT ++++ EL
Sbjct: 259 PIDDGDFNDCGAGVLYTCEAYDEEYLKKFDEPTKRSKIPKIYYGTRTHKQIQQVTREL-- 316
Query: 90 LHNYQTRHLGPAAKILAIGLSSRKNLCV--NSRVLAAENRDSVDAACRKRTASWVRALAA 147
R K + I LSSR++ C+ ++R D +D KR + +
Sbjct: 317 ------RKTAYKQKKMTI-LSSREHTCIQESNRNKTELCNDLLDPLKGKRCPFYNES--- 366
Query: 148 ENPNIETCEFFENYE-KAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVV 206
N ++ F + E + ++A + ++DL A GK++G CPYF AR++++FA+++
Sbjct: 367 ---NKKSINSFTSLEIRGVNSA------WDIEDLVAIGKEEGICPYFAARNLMEFADIIF 417
Query: 207 YSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTL 256
Y Y++DP + + ++ K+ VV+ DEAHNI+++C E SV+ R L
Sbjct: 418 CPYNYIIDPDIRESMQIDL-KDEVVILDEAHNIEDICREVASVAFREDQL 466
>gi|307103171|gb|EFN51433.1| hypothetical protein CHLNCDRAFT_140146 [Chlorella variabilis]
Length = 121
Score = 116 bits (290), Expect = 5e-23, Method: Composition-based stats.
Identities = 60/82 (73%), Positives = 64/82 (78%), Gaps = 5/82 (6%)
Query: 1 MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
M F+LE +TVYFPY IYPEQ+ YMLEL DAKGHCLLEMPTG GKT+ LLSLITSY
Sbjct: 1 MRFQLEGLTVYFPYHFIYPEQHQYMLEL----DAKGHCLLEMPTGMGKTVTLLSLITSYQ 56
Query: 61 LSKPENPVKLIYCTRTVHEMEK 82
L PE KLIYCTRTV EMEK
Sbjct: 57 LPHPEVG-KLIYCTRTVPEMEK 77
Score = 45.4 bits (106), Expect = 0.10, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 216 KVAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
KV+ + S E ++E VVVF EAHNIDNVCIE LS
Sbjct: 77 KVSQMESCEFERECVVVFVEAHNIDNVCIEKLS 109
>gi|449018745|dbj|BAM82147.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 1142
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 47/310 (15%)
Query: 430 VLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDL--------YP-RLLNFHPVVSRSFK 480
L C LA++ +V++TSGTLSP++ +P RL N H VV + +
Sbjct: 610 TLSFWCLWPGLALRRATSNAHAVLLTSGTLSPLESVASEMGASFPVRLQNSH-VVDPATQ 668
Query: 481 MSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSY 540
+ +LT+G + +++ + R + + G LV + + P G++ FF SY
Sbjct: 669 -------VFAGILTKGPRDIQLNSSYANRHNREYISDLGSALVNIARVSPRGMLVFFPSY 721
Query: 541 SYMDEIIATWNDSG--------------------ILKEIMQHKLVFIETQDVVETTLALD 580
+ + W + + K +F+E +D + +D
Sbjct: 722 VLLARFVEIWQTGAFHHNNPLNPAHRGRQPTQATVWDRLNAVKRIFMEPRDADASRQTVD 781
Query: 581 NYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL-R 639
YR+ GR A F+V RG+ EGIDF +GR VI+ G+PF T ++ + +YL R
Sbjct: 782 AYRQWISSGRDACLFAVCRGRTGEGIDFADDFGRTVILVGLPFPSTTDPRIILKRDYLER 841
Query: 640 DTFQIKE-GDFLTF------DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLP 692
+++ G +T LR A Q +GRVIR D+G ++ D+R+ H + LP
Sbjct: 842 QALHLRDHGKTITGRLWYVQQCLRAANQAMGRVIRHAQDFGAILLCDERFRAHLR--DLP 899
Query: 693 GWILSHLRDA 702
W+ + DA
Sbjct: 900 RWLSAASSDA 909
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 134/326 (41%), Gaps = 70/326 (21%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL-------SLIT 57
+ V V FP++ YP Q YM + AL + LLE PTGTGKT+ LL SL+
Sbjct: 14 IRQVPVEFPFEP-YPCQVRYMEHVIEALQTGQNALLESPTGTGKTLGLLCAALAWRSLLV 72
Query: 58 SYVLSK----------PENPVKLIYCTRTVHEMEKTL-------AELKLLHNYQTRHLGP 100
+ V + ++ K Y R + ++ A L+ L + GP
Sbjct: 73 AQVQGQASTQRISKSLADDSPKNDYGERLLQGVQGAAGAVVAPEASLRGLVPAASSENGP 132
Query: 101 AAKIL--------------------------AIGLSSR-------KNLCVNSRVLAAENR 127
L A G S R ++LCV+ V EN
Sbjct: 133 GPTPLQSVPRIIYLTRTHSQIKQAVRELSRTAYGASVRTVVLGSRQHLCVHPVVSRLENA 192
Query: 128 DSVDAAC----RKRTASWVRALAAENPNIETCE--FFENYEKAASAAVLPPGVYTLQDLR 181
+ C ++R S+ L AE E + FF + ++ A+ L+DL
Sbjct: 193 TMQNVRCTQLTKERRCSFY--LNAEQKFKEVGDDFFFIAVDSTSTLALPGRRPRDLEDLA 250
Query: 182 AFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDN 241
A+G Q CPYFL+R A ++ Y YL D K + ++ + +++ DEAHN+++
Sbjct: 251 AYGHQHAMCPYFLSREASAEAEIIFMPYNYLFDGKCRRSLGLSVEGD-IIIGDEAHNLES 309
Query: 242 VCIEALS---VSVRRQTLEGATRNLS 264
+C ++LS + RQ A + L+
Sbjct: 310 ICCDSLSFDFTAAERQRCVSAIQQLA 335
>gi|301117338|ref|XP_002906397.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107746|gb|EEY65798.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 819
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 7/270 (2%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICP-----M 491
+ ++ + + ++ +SV++ GT+ P+ L F + + I P
Sbjct: 524 NPAIHFQEIVNKSRSVILAGGTMQPVSQVIDQL-FSSIPREHIDLFSCGHVIPPKNLLGF 582
Query: 492 VLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWN 551
L G Q + + R D G++L+ ++ IVP GIV FF SY + + + W
Sbjct: 583 SLASGPSQKHLEFTYSQRGDMEALDELGRILLNLLRIVPGGIVVFFPSYRFEESAVRRWQ 642
Query: 552 DSGILKEIMQHKLVFIETQDVVETTLALDNYRKACD-CGRGAVFFSVARGKVAEGIDFDR 610
+ ++I K +F E + E L Y AC G GAV SV GK++EGI+F
Sbjct: 643 ATKQYEQIQAKKAIFSEPKKSDELAEVLMQYSAACSRSGNGAVLLSVVGGKMSEGINFSD 702
Query: 611 HYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKA 670
R V+M G+P+ L+ ++ +L F ++ Q +GR IR +
Sbjct: 703 ELARCVVMVGMPYPNARDAELVEKMAFLDKITPGSGRQFYESLCMKAVNQSIGRSIRHQK 762
Query: 671 DYGMMIFADKRYSRHDKRSKLPGWILSHLR 700
DY ++ D RYS RS+LP WI + ++
Sbjct: 763 DYSTILLVDCRYSSPAVRSRLPEWIQTRVQ 792
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
VK+IYC+RT ++ + + E+ R A I + L SRKNLC N +V +
Sbjct: 174 VKIIYCSRTHSQISQFVREI--------RKTAFADHIRVVSLGSRKNLCTNPKVTKLSSD 225
Query: 128 DSVDAACRKRTASWVRALAAENPNIETCEFFE-----NYEKAASAAVLPPGVYTLQDLRA 182
+ C S + C F+E +Y+ A A V ++DL
Sbjct: 226 LRMTDKCLDMMQS---GKTKNGKKVAKCPFYEKELLGHYKDYALAHV-----QDIEDLHT 277
Query: 183 FGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNV 242
G + C Y+ R + A +V Y LL + ++ +++V+FDEAHNI +
Sbjct: 278 LGDEMSICSYYGTRESIPLAQIVTVPYSMLLSKDTRETLGIALE-DNIVIFDEAHNIIDA 336
Query: 243 CIEALSVSVRRQTLEGATRNL-SRINQEIERFKATDA 278
V + + L A R L S ++ +RFK +A
Sbjct: 337 INNTYKVEITSKQLVVARRTLWSYFSKYEKRFKGKNA 373
>gi|348564458|ref|XP_003468022.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cavia
porcellus]
Length = 424
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 28/301 (9%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVS-RSFKMSLTR----DCICPMVLTRGSD 498
V + ++VVI GT+ P+ D +LL + S R + S R D I P+VL
Sbjct: 131 VMEECRAVVIVGGTMQPVSDFREQLLTWAGTQSERVVEFSCGRVIPPDNILPLVLCSRPT 190
Query: 499 QLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKE 558
+ F R P + G++L + +++P +VCFF SY Y +++ W+ SG+L
Sbjct: 191 SQQLEFTFQQRKLPAMLEETGRILCNLCNVIPGQLVCFFPSYEYQRQVLGHWDKSGLLAR 250
Query: 559 IMQHKLVFIETQDVVETTLALDNYRKACD-CGR------GAVFFSVARGKVAEGIDFDRH 611
+ K +F E + + L Y K CG+ GA+ SV GK++EGI+F
Sbjct: 251 LTVRKKLFQEPKRASQVEQVLAAYSKCIQRCGQAGGPLTGALLLSVVGGKMSEGINFADD 310
Query: 612 YGRLVIMFGVPFQYTLSKILLARLEYL-----RDTFQIKEGDFLTFD-ALRQAAQCVGRV 665
GR ++M G S L ++ YL R Q+ G L + ++ Q +
Sbjct: 311 LGRCMVMVG----NIQSPELQEKMAYLDQHLPRSPGQVPPGKALLENLCMKAVNQSISEA 366
Query: 666 IRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA-REFLRKMAQ 724
IR + D+ ++ D+ Y+R +KLP WI RD +T A +A R+F ++ A
Sbjct: 367 IRHQRDFASIVLLDQHYTRPPVLAKLPAWI----RDCVKIKATFGAQFLALRKFHKEKAG 422
Query: 725 P 725
P
Sbjct: 423 P 423
>gi|452002470|gb|EMD94928.1| hypothetical protein COCHEDRAFT_1168302 [Cochliobolus
heterostrophus C5]
Length = 1449
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 130/295 (44%), Gaps = 32/295 (10%)
Query: 437 DASLAVKPVFDRFQSVVITSGTLSPIDLYPR-LLNF---HPVVSRSFKMSLTRDCICPMV 492
D + K V + ++VV+ GT+SP+ Y + LL++ + + S + + +
Sbjct: 545 DPTFHFKDVVEEARAVVLAGGTMSPMSDYEQHLLSYLEPSKIKTLSCGHVIPPSNLLAVP 604
Query: 493 LTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATW-- 550
+ R + FD R+ + G + +PDG+V FF SYSY+D IA W
Sbjct: 605 VVRATSGAEFDFTFDNRNKEKTIIDLGAAISGFARDIPDGVVVFFPSYSYLDTCIAAWKR 664
Query: 551 -----NDSGILKEIMQHKLVFIETQD--------------VVETTLALDNYRKACDCGRG 591
+++ K VF+E + V++ L + A GRG
Sbjct: 665 LKPAQSNTTFWDAFKSSKPVFLEQRSQQQNLDASSAVKEAAVDSVLNAYSAAIASGNGRG 724
Query: 592 AVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGD--- 648
A+ F+V G ++EGI+F GR V++ G+PF S A+++Y+ GD
Sbjct: 725 ALLFAVIGGTLSEGINFSDALGRGVVVVGLPFPNAHSAEWKAKMQYIAAKEAKHGGDGKA 784
Query: 649 ----FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
F +R QCVGR IR K DY ++ D+RY + KLP WI L
Sbjct: 785 AAREFYENACMRSVNQCVGRAIRHKGDYAAILMLDRRYGSKRIQDKLPRWIRGSL 839
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 32/257 (12%)
Query: 46 TGKTIALLSLITSYVLSKPEN-------PVKLIYCTRTVHEMEKTLAELKLL-------- 90
+ +T AL++ + Y P+N K+ +C+RT ++ + +EL +
Sbjct: 172 SAETQALMASL-GYTDDAPKNDDGEVPDETKIFFCSRTHSQLTQFSSELGRVKMPPAIAL 230
Query: 91 ----HNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRK-RTASWVRAL 145
+ L K L +G SRKNLC+N +V + +++ C + + S +
Sbjct: 231 DDDTNGADIDSLVEDVKHLTLG--SRKNLCINGKVNKLGSATAINERCLELQQNSSAESR 288
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
P+ E ++ A A + ++DL GK+ G CPY+ +R ++ +V
Sbjct: 289 CPHMPSKEQEPLINDFRDHALAKI-----RDIEDLGLLGKKLGVCPYYASRPATKYCEIV 343
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y LL + + K+ VV+ DEAHN+ + SVSV TL + ++
Sbjct: 344 TLPYPLLLQRTAREALGLSL-KDHVVIIDEAHNLMDAIAGIYSVSV---TLGQVQQARAQ 399
Query: 266 INQEIERFKATDAGRLR 282
+ +++F+ G+ R
Sbjct: 400 LTAYLQKFRNKLKGKNR 416
>gi|240279285|gb|EER42790.1| DEAD_2 protein [Ajellomyces capsulatus H143]
gi|325089554|gb|EGC42864.1| DEAD-box protein [Ajellomyces capsulatus H88]
Length = 507
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 478 SFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFF 537
S+ + D + + + RG+ + R+D + + G+ + + ++PDG+V FF
Sbjct: 21 SYGHVIPPDNLAAIPVVRGTCNTEFDFTYGKRNDESMITDLGRTIATLCCVIPDGVVVFF 80
Query: 538 VSYSYMDEIIATWND------SGILKEIMQHKLVFIETQD-VVETTLALDNYRKACDCGR 590
SY Y+++++ W S I+ I + K VF E+QD + L Y A + G
Sbjct: 81 PSYDYLNQVLMIWKKHILTTGSSIIDSIQRSKAVFHESQDKATDVDELLQGYSSAINTGS 140
Query: 591 --GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF------ 642
GA+ SV GK++EGI+F GR VI+ G+PF S + A+++++
Sbjct: 141 QGGALLLSVMGGKLSEGINFSDKLGRGVIVVGLPFPNIRSAVWQAKIQHVESKAYESYLS 200
Query: 643 ------QIKEG-----------------DFLTFDALRQAAQCVGRVIRSKADYGMMIFAD 679
Q +G +F +R QC+GR IR + DY ++ D
Sbjct: 201 LSSSLDQDHKGKEISEENRKLKAKSAGREFYENACMRTVNQCIGRAIRHQGDYAAILMMD 260
Query: 680 KRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRK 721
+RYS ++KLP WI L + A+ F RK
Sbjct: 261 RRYSSLRIQNKLPSWIRQSLVAGASEQPAERAIGDISAFFRK 302
>gi|147789151|emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
Length = 914
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 138/308 (44%), Gaps = 60/308 (19%)
Query: 445 VFDRFQSVVITSGTLSPID-----LYPRLLN--FHPVVSRSFKMSLTRDCICPMVLTRGS 497
+ D+ +V++ GTL PI+ L+PRL + FH S + + I P+ L+ G
Sbjct: 579 IVDQAHAVILAGGTLQPIEETRERLFPRLTSDQFHFF---SCSHIIPPESILPVALSHGP 635
Query: 498 DQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILK 557
+ RS + G LL +V++VP+GIV FF S+ Y ++ W SGIL+
Sbjct: 636 SGQSFDFSYSSRSSSIMIEELGLLLCNLVTVVPEGIVVFFSSFDYEGQVHDAWKASGILE 695
Query: 558 EIMQHKLVFIETQDVVETTLALDNYRKACDCG------------RGAVFFSVARGKVAEG 605
IM+ K VF E + + L Y++A D GA+ +V GK++EG
Sbjct: 696 RIMKKKCVFREPRKNTDVEFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEG 755
Query: 606 IDFDRHYGRLVIMFGVPFQYTLSKILLARLEYL---------RDT-FQIKE----GDF-L 650
I+F GR ++M G+P+ LL R++Y+ R T F + GD +
Sbjct: 756 INFSDGMGRCIVMVGLPYPSPSDIELLERVKYIEGLGVSISSRSTKFSVGNEYYSGDVQV 815
Query: 651 TFDALRQAA----------------QCVGRVIRSKADYGMMIFADKRYSRHD-KRS---- 689
FD LR Q +GR IR DY ++ D RY+ KRS
Sbjct: 816 GFDILRSCKHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDARYASDPLKRSFSHP 875
Query: 690 --KLPGWI 695
KLP WI
Sbjct: 876 TNKLPQWI 883
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+K+ +C+RT ++ + + EL+ G K++ +G SRK C+N VL N
Sbjct: 185 LKIYFCSRTHSQLSQFVKELR------KTIFGNEMKVVCLG--SRKISCINEEVLKLGNS 236
Query: 128 DSVDAAC------RKRTASWVRALAAENPNIET-----CEFFENY--EKAASAAVLPPGV 174
++ C +K+ S ++ L +E T C N+ +K + + G
Sbjct: 237 TRINERCLELQQNKKKEVSKLKNLGSEGRIRRTKASSGCPMLRNHKLQKQFRSEISQEGA 296
Query: 175 YTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
++DL G++ G CPY+ +R ++ A++VV YQ LL + + K ++V+ D
Sbjct: 297 LDIEDLVHLGRRMGTCPYYGSRSIIPAADLVVLPYQSLLSKSSRESLGLNL-KNNIVIID 355
Query: 235 EAHNIDNVCI 244
EAHN+ + I
Sbjct: 356 EAHNLADSLI 365
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPE 65
FPY+ Y Q +M L R+L+ G +LE PTGTGKT++++ +++ + +
Sbjct: 12 FPYEP-YSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLVDRKQ 64
>gi|409078986|gb|EKM79348.1| hypothetical protein AGABI1DRAFT_58886 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 867
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 24/276 (8%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHPVVSRSFKMS--LTRDCICPMVLTRGSDQLP 501
V D +S+++ GT+SP+ D+ +L + R+F + + +V+T+
Sbjct: 574 VVDEARSIILAGGTMSPMSDVVSQLFSHALERIRTFSCGHVIPEKNLQALVVTKSPRGGS 633
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
+ K D + DP V G++L+ +++P G+V FF SY+++ W G L
Sbjct: 634 LEYKADKQGDPNVVAELGQILLNFANVIPAGVVVFFPSYNFLKFAKNVWKAGGTLDRFSA 693
Query: 562 HKLVFIETQDVVETTLALDNYRKACDC----GRGAVFFSVARGKVAEGIDFDRHYGRLVI 617
+ VF E + L Y A +GA+ F+V K++EG++F R VI
Sbjct: 694 KREVFFEPDGSTDVERVLGEYAAAATTPPVNKKGAILFAVIGAKLSEGLNFSDDLARAVI 753
Query: 618 MFGVPFQYTLSKILLARLEYLRDTFQIKE--------------GDFLTFDALRQAAQCVG 663
+ G+PF S L RL+Y++ Q++E + + Q +G
Sbjct: 754 VIGLPFANLGSPELKERLKYVK---QLEERRGSKREKGQKDAAAELYENMCMNSVNQSIG 810
Query: 664 RVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHL 699
R IR K D+ +I D+RY+ R KLP WI L
Sbjct: 811 RAIRHKGDWASLILLDQRYASSAIRMKLPQWIGGRL 846
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 44/212 (20%)
Query: 60 VLSKPENP---------VKLIYCTRTVHEMEKTLAEL---KLLHNYQTRHLGPA------ 101
++S+ +NP K+ Y +RT ++ + L EL KL L P+
Sbjct: 185 LMSRVDNPSRFDEETICTKIYYASRTHSQLSQVLPELRRIKLSQAVAVIDLHPSSVPQKR 244
Query: 102 -AKIL---------AIGLSSRKNLCVNSRVLAAENRDSVDAACRK----RTASWVRALAA 147
A +L + L SRK LC+N L ++ RD +D ACR+ + L
Sbjct: 245 GADVLHDVDSTTTRVVALGSRKQLCINDE-LRSKARD-LDEACRELLSEKGDQRCPYLPP 302
Query: 148 ENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVY 207
+I+ +F + A ++DL G+ CPYF +RH + A +V
Sbjct: 303 PGEDIKIIDFRDQILAAPK---------DIEDLAEVGRMADTCPYFGSRHAIPQAELVTL 353
Query: 208 SYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239
Y LL + ++ ++ +VV DEAHN+
Sbjct: 354 PYNLLLQKSAREALGIDL-RDQIVVIDEAHNL 384
>gi|307108093|gb|EFN56334.1| hypothetical protein CHLNCDRAFT_144794 [Chlorella variabilis]
Length = 1763
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 41/302 (13%)
Query: 429 PVLQLSCHDASLAVKPVFD-RFQSVVITSGTLSPIDLYP---------RLLNFHPVVSRS 478
P L C L+++ + D + +S+++TSGTLSP+D + RL N H V+++
Sbjct: 763 PTLSYWCFSPGLSMQQLTDMKVRSILLTSGTLSPLDSFAHELGLPFPIRLENPH-VIAKE 821
Query: 479 FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV 538
+ V+ G +++ + R + + G+ LV I+PDG++ FF
Sbjct: 822 QASGVWVG-----VVPTGPSGHALNSSYQNRENAAYRSDLGQALVNFCRIIPDGLLVFFT 876
Query: 539 SYSYMDEIIATWN---DSG---ILKEIMQHKLVFIETQDVVETTLALDNYRKAC--DCGR 590
SY+ + +ATW SG I + I + K IE ++ A ++R
Sbjct: 877 SYAQLQSCVATWKQVPSSGGPSIWERIAKSKQPVIEPRESAAFNAAALDFRAKLLNPAYN 936
Query: 591 GAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT--------- 641
GA FF+V RGK++EG+DF GR V++ G+P+ + + E L +
Sbjct: 937 GAAFFAVTRGKLSEGLDFSDAAGRAVVLTGIPYAMRHDPKVRLKQEVLNEARSAPRKRGA 996
Query: 642 -------FQIKEGD-FLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPG 693
Q GD + + +A+R Q VGRVIR DYG +I D+R+ + + +L
Sbjct: 997 AGGASAAPQGLSGDQWYSQNAMRAVNQAVGRVIRHARDYGAIILCDERFKSPNVQRQLSC 1056
Query: 694 WI 695
W+
Sbjct: 1057 WL 1058
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 81/309 (26%)
Query: 8 VTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--VLSKPE 65
V V FP++ YP Q YM ++ +AL H LLE PTGTGKT+ LL ++ L+
Sbjct: 284 VEVEFPFE-AYPCQLDYMTKVIQALQEGQHALLESPTGTGKTLCLLCATLAWRQSLTTQA 342
Query: 66 NPV----------------------------------------------KLIYCTRTVHE 79
P +++Y +RT +
Sbjct: 343 RPASHPAAAAVGEVQANQHSSTLVQGLREAWAEHRATKMAEGGPGSGLPQIVYSSRTHSQ 402
Query: 80 MEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACR---- 135
+++ + ELK +Y+ R ++SR++ C++ V + + + ACR
Sbjct: 403 LQQVMRELKSC-SYKPR---------TATVASRQHGCLHPVV--STMQAGANQACRALVS 450
Query: 136 KRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLA 195
KR W + E F A+A VL ++DL G+ + CPY+LA
Sbjct: 451 KRACKWYNGV----------EKFVRQNPDANAEVL-----DIEDLGRIGESRTVCPYYLA 495
Query: 196 RHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQT 255
R M A++V Y YLLD K + Q +V++FDEAHN++ VC +++S +
Sbjct: 496 REMAATADIVFMPYNYLLDAKTRTGLGIAWQS-AVLIFDEAHNVEQVCSDSMSFDLPAAA 554
Query: 256 LEGATRNLS 264
L A L
Sbjct: 555 LASAIEELG 563
>gi|74203152|dbj|BAE26258.1| unnamed protein product [Mus musculus]
Length = 527
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 67/321 (20%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALL----------- 53
L VTV FP+ YP Q YM ++ L K + +LE PTGTGKT+ LL
Sbjct: 6 LNGVTVDFPFQP-YPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLR 64
Query: 54 --------------SLITSYVLSKPENPV--------------KLIYCTRTVHEMEKTLA 85
L S LS + K+IY +RT ++ + +
Sbjct: 65 DAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQVIR 124
Query: 86 ELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRAL 145
EL R+ K+ +G SR+ LC++ V E+ + CRK+ AS
Sbjct: 125 EL--------RNTAYRPKVCVLG--SREQLCIHPEVKKQESNHMQISLCRKKVAS----- 169
Query: 146 AAENPNIETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVV 205
+C F+ N E L + ++DL G +Q CPY+L+R+M Q A+++
Sbjct: 170 -------RSCHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADII 222
Query: 206 VYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
Y YLLD K S ++ K +VV+FDEAHN++ +C E+ S + T L
Sbjct: 223 FMPYNYLLDAKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDL---TPRDVASGLEI 278
Query: 266 INQEI-ERFKATDAGRLRAEY 285
INQ + E+ + T G L+ E+
Sbjct: 279 INQVLEEQARVTQQGELQQEF 299
>gi|403358712|gb|EJY79009.1| Fanconi anemia group J protein [Oxytricha trifallax]
Length = 965
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 27/311 (8%)
Query: 431 LQLSCHDASLAVKPVFDRFQ-SVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCIC 489
+ L C +A+ K + + S+++TSG+LSPI L+ + + ++ I
Sbjct: 463 MHLYCFNAAFTFKQIQRKNPFSIILTSGSLSPISTVSYELDVKFDYIMTGGHVIQKNQIL 522
Query: 490 PMVLTRGSDQLPVSTKFDMRSDPG--VARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEII 547
P+V + L +S+K+D+ + + NYGKL+ + + GI+ FF SY M
Sbjct: 523 PIVYPFCDNGLELSSKYDLPKEHKTIIDENYGKLVRDACLTIEGGILVFFSSYEKMKYSY 582
Query: 548 ATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKAC------DCGRGAVFFSVARGK 601
W + I++ K + E Q+ +++Y + GAV F V RG
Sbjct: 583 DLWTKKMYMASILKVKSFYQEQQNKELNNQTIESYLRDMRELDMQSKKNGAVLFGVCRGN 642
Query: 602 VAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTF-QIKEG---------DFLT 651
+EG DF + R VI+ G+PF LL + +L F Q+KE +F++
Sbjct: 643 FSEGYDFSDYDARCVIIIGMPFACISDPKLLMKWHFLDYRFNQMKENSQKIRDTDSNFIS 702
Query: 652 FDAL------RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLN 705
R Q VGRVIR K DYG++I AD+RY ++ LPGW+ + A N
Sbjct: 703 GKTWYEQQTHRAINQAVGRVIRHKNDYGVVILADERYRLSKNQAMLPGWMRKQITVA--N 760
Query: 706 LSTDMALHIAR 716
S ++ H +
Sbjct: 761 SSKELRQHYQK 771
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 3 FKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV-- 60
F +E + + FP Y Q YM +A+ + LEMPTGTGKT++LLS +++
Sbjct: 98 FSVEGIEIKFP-KIPYKVQEEYMTLAVKAIKNNKYAALEMPTGTGKTLSLLSSTLAFIDQ 156
Query: 61 -----LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
LS + +KLIY +RT ++ + E++ P ++ ++SR
Sbjct: 157 YNQSNLSTQKQKLKLIYTSRTHSQLSQVRKEIR---------KSPYQYFKSVTIASRDYY 207
Query: 116 CVNS 119
C+ S
Sbjct: 208 CLRS 211
>gi|432331527|ref|YP_007249670.1| DNA helicase, Rad3 [Methanoregula formicicum SMSP]
gi|432138236|gb|AGB03163.1| DNA helicase, Rad3 [Methanoregula formicicum SMSP]
Length = 669
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 164/740 (22%), Positives = 294/740 (39%), Gaps = 133/740 (17%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGH-CLLEMPTGTGKTIALLSLITSYVLSK 63
+ + +FPY P Q +MLE+ + G +++ PTG+GK+ + SL+
Sbjct: 1 MNSIDTFFPYSEYRPGQ-RHMLEVAATVARDGGIAMIDAPTGSGKSSVVASLLAE----- 54
Query: 64 PENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLC------- 116
K++ RTV ++ + EL+L+ A +I + L +K++C
Sbjct: 55 -RKGRKVVIAVRTVSQLTTFIRELELVKK-------KAPQIKTVYLVGKKSMCPLGGEGD 106
Query: 117 -----------VNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAA 165
S + + ++ A +R + E+P + C ++ N +
Sbjct: 107 VYRRCEGVKAFSTSLMRDRAEKGAMIPAKDPFIIQQIRRMDREHPLL--CPYYINSKMFV 164
Query: 166 SAAVLPPGVYTLQDLRAFGKQ---------------QGWCPYFLARHMVQFANVVVYSYQ 210
A + + +LR + G CPY L H + NVV+ +Y
Sbjct: 165 PAEGVGVRMVPSTELRNKADRVIQNPVPPRDLTEYSSGLCPYELMMHAAKNTNVVILNYH 224
Query: 211 YLLDPKVAGIISKEM---QKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRIN 267
+L D ++ + + +++ +++ DEAHN +V SV++ + LE A+R LS +
Sbjct: 225 HLFDRQIREQLYANLGVEEQDILLLIDEAHNCGDVITGIESVTMEERDLEQASRELSGMA 284
Query: 268 QEIERFKATDAGRLRAEYNRLVEGLALRGNLPNAWLSNPALPSDILKEAVPGNIRRAEHF 327
+ R K +A +R RL E +RG L N D A+ + E
Sbjct: 285 R---RHKGAEA--VRHVLPRLTE--FIRG------LQNSVEAEDWFDPAIFDRMIVRESL 331
Query: 328 LHVLRRLVQYLRGRLET--ENVEKEGPVSFVASITAHAGIDQKTLRFCYERLHSLMLTLE 385
+ +V L G ET E +K G A ERL +L L
Sbjct: 332 YKDMDEIVDDLMGLSETIREKNQKSGEFRETA----------------IERLTEFLLRLS 375
Query: 386 ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAVKPV 445
+ TD F T+ G ++ + D P L C + A
Sbjct: 376 NSATDP--------AFLTVYRKEESGITLEVRSID------PAASLSEVCGSHACA---- 417
Query: 446 FDRFQSVVITSGTLSPIDLYPR-LLNFHPVVSRSFKMSLTRD---CICPMVLTRGSDQLP 501
++ SGTLSP++ + + V + S + ++ +C +D
Sbjct: 418 -------ILISGTLSPVESFRKYYFGNGNVTTLSLPNAFPKENRLIVC------AND--- 461
Query: 502 VSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQ 561
++T + MR + + S+ + + +F SY +I+ T+ D + ++
Sbjct: 462 ITTAYSMRQNKENTNRIAGYIRSFSSLKGNRAI-YFPSY----QILETYAD--LTARDIR 514
Query: 562 HKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 621
K VFIE +D AL + V F+VA GK +EG+D+ ++ G+
Sbjct: 515 GKKVFIEPRDAAGAGAALTEFLSLPSRRESGVMFAVAGGKWSEGLDYRGEMMAGAMVIGL 574
Query: 622 PFQYTLSKILLARLEYLRDTFQIKEGDFL--TFDALRQAAQCVGRVIRSKADYGMMIFAD 679
P +++ +EY R F EG+FL T A+ ++ Q +GRV+R+ D G+++ +
Sbjct: 575 PLA-PFNRVRKMMIEYYRHKFG-PEGEFLCYTLPAVNRSLQALGRVLRTPEDRGVLVLGE 632
Query: 680 KRYSRHDKRSKLPGWILSHL 699
KR+ + LP WI +
Sbjct: 633 KRFLEKKVKDALPAWIQEEM 652
>gi|299743627|ref|XP_001835886.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
gi|298405743|gb|EAU85951.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
Length = 905
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 47/302 (15%)
Query: 445 VFDRFQSVVITSGTLSPI-DLYPRLLNFHP---VVSRSFKMSLTRDCICPMVLTRGSDQL 500
+ + +++++ GT+SPI D+ +L P V + S + D + P+ + +G
Sbjct: 567 IVEDARAIILAGGTMSPISDVTNQLFYSVPRERVSNFSCGHVIPEDNLKPLAVMKGPKGH 626
Query: 501 PVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIM 560
+ + + +SDP V G+++ SI P G++ FF SYS+++ ATW S +L
Sbjct: 627 DLDFRANRQSDPTVLAELGQIIFNYASITPAGMIVFFPSYSFLNTAKATWGKSKVLDRFG 686
Query: 561 QHKLVFIETQDVVETTLALDNYRKAC----------------------------DCGRGA 592
K VF E ++ L Y KA D G
Sbjct: 687 TKKAVFFEPEESNAVESVLQEYSKAAQVCILIAHQRLQYKPAGLFYREQSVPSSDRKGGG 746
Query: 593 VFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLR--DTFQIKEGDFL 650
+ F+V K++EG++F R VI+ G+PF S L R++Y++ + + + GDF
Sbjct: 747 LLFAVIGAKLSEGLNFSDDLARTVIIVGLPFANLGSPELRERMKYVKMLEEKRQQNGDFS 806
Query: 651 TFDALRQAA-------------QCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
+ AA Q +GR IR + D+ ++ D+RY+ R+KLP WI +
Sbjct: 807 KPAGQKDAAAELYENICMNAVNQSIGRAIRHRNDWASLLLLDRRYASATIRNKLPKWIGN 866
Query: 698 HL 699
L
Sbjct: 867 RL 868
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 86/237 (36%), Gaps = 66/237 (27%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQ----TRHLGPAA--------------------- 102
K+ Y +RT ++ + L EL+ L Q H AA
Sbjct: 244 TKIYYASRTHSQLSQVLPELRRLKLKQQISVANHCTSAASGNQASTGRKRCAEEHEDTDE 303
Query: 103 -----KILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEF 157
+I + L SRK LC+N + E +D ACR+ A +IE
Sbjct: 304 EVAGKRIRIVALGSRKQLCINDEL--REKSSDLDEACRELLGG-----RASQKDIE---- 352
Query: 158 FENYEKAASAAVLPPGVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKV 217
DL G+ CPYF +R + A +V Y LL
Sbjct: 353 ---------------------DLAEAGRLANTCPYFGSRKAIPQAELVTLPYNLLLQKSA 391
Query: 218 AGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIERFK 274
+ ++ K +V+ DEAHN+ LS+S R + +L ++ + + RFK
Sbjct: 392 REALGIDL-KGQIVIIDEAHNLIPTL---LSLSTHRLSYGTLAISLQQVAEYVRRFK 444
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 12 FPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYVLSKPENPVK 69
FPYD Y Q M + A++ K ++E PTGTGKT+ LL +++L + + K
Sbjct: 60 FPYDPPYAIQVDLMRHVYEAIEKKHVTIVESPTGTGKTLTLLCSSLTWLLDEKDRARK 117
>gi|195565263|ref|XP_002106221.1| GD16747 [Drosophila simulans]
gi|194203595|gb|EDX17171.1| GD16747 [Drosophila simulans]
Length = 308
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 5/177 (2%)
Query: 511 DPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQ 570
+P + G+ ++ + IVPDG++ FF SY +++ + W SG+ +I K +F+E +
Sbjct: 13 NPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPR 72
Query: 571 DVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKI 630
+ T ++ + +A +GAVF +V RGKV+EG+DF GR VI+ G+PF
Sbjct: 73 SKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPK 132
Query: 631 LLARLEYL-----RDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
++ + YL R+ + ++ DA R Q +GRVIR + DYG ++ D R+
Sbjct: 133 VILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRF 189
>gi|341878944|gb|EGT34879.1| hypothetical protein CAEBREN_04447 [Caenorhabditis brenneri]
Length = 537
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 14/286 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLN---FHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVST 504
+S V+ GT+ P L L+ P R F S + + + + + D P
Sbjct: 256 RSTVLVGGTMEPAQLLVETLSRGSIGPDSIRRFSCSHVINDSQLLAVTINKTVDGKPFRL 315
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
+ RS P ++ + + + +P+G+V F SY ++ E+ ++ IL++I + K
Sbjct: 316 TYQTRSLPETLKSLARSIQVLSQHLPNGVVVFVPSYDFLFELKKKMIETKILEQIERKKS 375
Query: 565 VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
VF ET+ T+ + +A +GA+FF+V GK++EGI+F GR VI+ G+PF
Sbjct: 376 VFTETRQ--STSDVFKRFSEAAKTSKGAIFFAVIGGKMSEGINFSDELGRAVIVIGLPFP 433
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAA--QCVGRVIRSKADYGMMIFADKRY 682
+ L R+ +L Q+ G + +++L A Q +GR IR + DY + D+R+
Sbjct: 434 NKTAVELRERMRFLDS--QMPNGGNMLYESLCMHAVNQAIGRAIRHRNDYAAVYLFDERF 491
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
S+ +SKL WI NL + ++ F + A+ +K
Sbjct: 492 SQDSIKSKLSSWIGDR---TQTNLGFTEIIQKSQAFFKSNAEAVNK 534
>gi|341878721|gb|EGT34656.1| hypothetical protein CAEBREN_18601 [Caenorhabditis brenneri]
Length = 830
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 14/286 (4%)
Query: 450 QSVVITSGTLSPIDLYPRLLN---FHPVVSRSFKMS--LTRDCICPMVLTRGSDQLPVST 504
+S V+ GT+ P L L+ P R F S + + + + + D P
Sbjct: 552 RSTVLVGGTMEPAQLLVETLSRGSIGPDSIRRFSCSHVINDSQLLAVTINKTVDGKPFRL 611
Query: 505 KFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKL 564
+ RS P ++ + + + +P+G+V F SY ++ E+ ++ IL++I + K
Sbjct: 612 TYQTRSLPETLKSLARSIQVLSQHLPNGVVIFVPSYDFLFELKKKMIETKILEQIERKKS 671
Query: 565 VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 624
VF ET+ T+ + +A +GA+FF+V GK++EGI+F GR VI+ G+PF
Sbjct: 672 VFTETRQ--STSDVFKRFSEAAKTPKGAIFFAVIGGKMSEGINFSDELGRAVIVIGLPFP 729
Query: 625 YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAA--QCVGRVIRSKADYGMMIFADKRY 682
S L R+ +L Q+ G + +++L A Q +GR IR + DY + D+R+
Sbjct: 730 NKTSVELRERMRFLDS--QMPNGGNMLYESLCMHAVNQAIGRAIRHRNDYAAVYLFDERF 787
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK 728
S+ +SKL WI NL + ++ F + A+ +K
Sbjct: 788 SQDSIKSKLSSWIGDR---TQTNLGFTEIIQKSQAFFKSNAEAVNK 830
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAAENR 127
+K+ Y +RT ++++ + EL+ +Q R + SR LCVN V+ +
Sbjct: 181 LKIFYASRTHSQLDQLIEELEKTR-FQPR---------VVTCGSRGTLCVNDEVMKLKLN 230
Query: 128 DSVDAAC---RKRTASWVRALAAENPNIE-------TCEFFENYE-KAASAAVLPPGVYT 176
++ C RK S + +CE++ + + + VL T
Sbjct: 231 HLINEKCMELRKNGTSEKEKKQKTEEGSKKKKSCATSCEYYNSTQIEELVNGVLANKFKT 290
Query: 177 LQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEA 236
L++ G CPYF R + +V+ YQ LL ++ K++V++ DEA
Sbjct: 291 SAQLKSQGSASHGCPYFATRKSIPQCQLVLLPYQVLLHEGTRNAWGIDL-KDNVIILDEA 349
Query: 237 HNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE-RFKATD 277
HN+ + S + ++L A + + N++ + R KA +
Sbjct: 350 HNVLSTINSLYSAEISEKSLALALKLIREYNEKYKLRLKAKN 391
>gi|72386955|ref|XP_843902.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359030|gb|AAX79479.1| helicase, putative [Trypanosoma brucei]
gi|70800434|gb|AAZ10343.1| helicase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 963
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 21/292 (7%)
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
H L C D S V+ + S+++TSGTLSP+ + L V +
Sbjct: 417 HANPRTLSYWCLDISRVVQSLVCDLHSLLLTSGTLSPLSHFAMELGVSFEVCLKGSHVIE 476
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ VL RG ++ + R+ G LV + I P GI+ FF SY ++
Sbjct: 477 EKQVIGSVLCRGPGGERLNGGYAFRNGVDYRIGLGMALVNISRITPGGILVFFPSYVALN 536
Query: 545 EIIATWNDSG--------ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVF 594
+ W G + + Q K VF+E + + ++++ D RGA
Sbjct: 537 AAVDLWRTGGGRANETETVWAMLEQVKPVFVEPAAAADAQTIVTSFQREVDANSTRGAFL 596
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG------- 647
+V RG+++EGIDF +GR V++ G+PF + + EY+ +
Sbjct: 597 LAVCRGRISEGIDFADQHGRCVVIAGIPFANHTDLFVRLKREYITRVSTKRPAVGGKPFT 656
Query: 648 --DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
++ +A+R QCVGRVIR K DYG ++ AD+R+ D+ L W+ S
Sbjct: 657 GNEWYMNEAMRSVNQCVGRVIRHKDDYGAVVLADERFV--DRLHGLSEWVGS 706
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 141/276 (51%), Gaps = 38/276 (13%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV---- 60
++ V V FP+ YP Q YM + AL + LLE PTGTGKT+ LL + +++
Sbjct: 6 IDGVEVSFPFAP-YPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWLDERR 64
Query: 61 -------LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-LSSR 112
+S + ++++YC+RT ++ + + E K +TR+ + I ++ L SR
Sbjct: 65 ICFLNSGISDRTSLLRVVYCSRTHAQLSQVIREFK-----RTRY----SSIFSMAVLGSR 115
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE-KAASAAVLP 171
++C+NS+VL + + +++ S +R E+ N C F+ YE +AA P
Sbjct: 116 DHMCLNSQVLQLPSSHA-----QRKLCSQLR----EDRN---CRFYRGYEARAAGRKDFP 163
Query: 172 P--GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
++ ++DL + G++ G+CPY+ R + A+VV Y Y+ D + E+ S
Sbjct: 164 DELWIHDMEDLVSEGRKCGFCPYYYERDAAKDADVVFLPYNYVFDVSFRKQLPFELSG-S 222
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
V++ DEAHN+ +V A ++++ L A SR
Sbjct: 223 VLIVDEAHNLPSVLGSASCMNLQPLDLANAICECSR 258
>gi|261327010|emb|CBH09985.1| helicase, putative [Trypanosoma brucei gambiense DAL972]
Length = 963
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 21/292 (7%)
Query: 425 HIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLT 484
H L C D S V+ + S+++TSGTLSP+ + L V +
Sbjct: 417 HANPRTLSYWCLDISRVVQSLVCDLHSLLLTSGTLSPLSHFAMELGVSFEVCLKGSHVIE 476
Query: 485 RDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMD 544
+ VL RG ++ + R+ G LV + I P GI+ FF SY ++
Sbjct: 477 EKQVIGSVLCRGPGGERLNGGYAFRNGVDYRIGLGMALVNISRITPGGILVFFPSYVALN 536
Query: 545 EIIATWNDSG--------ILKEIMQHKLVFIETQDVVETTLALDNYRKACDCG--RGAVF 594
+ W G + + Q K VF+E + + ++++ D RGA
Sbjct: 537 AAVDLWRTGGGRANETETVWAMLEQVKPVFVEPAAAADAQTIVTSFQREVDANSTRGAFL 596
Query: 595 FSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEG------- 647
+V RG+++EGIDF +GR V++ G+PF + + EY+ +
Sbjct: 597 LAVCRGRISEGIDFADQHGRCVVIAGIPFANHTDLFVRLKREYITRVSTKRPAVGGKPFT 656
Query: 648 --DFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 697
++ +A+R QCVGRVIR K DYG ++ AD+R+ D+ L W+ S
Sbjct: 657 GNEWYMNEAMRSVNQCVGRVIRHKDDYGAVVLADERFV--DRLHGLSEWVGS 706
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 141/276 (51%), Gaps = 38/276 (13%)
Query: 5 LEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV---- 60
++ V V FP+ YP Q YM + AL + LLE PTGTGKT+ LL + +++
Sbjct: 6 IDGVEVSFPFAP-YPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWLDERR 64
Query: 61 -------LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIG-LSSR 112
+S + ++++YC+RT ++ + + E K +TR+ + I ++ L SR
Sbjct: 65 ICFLNSGISDRTSLLRVVYCSRTHAQLSQVIREFK-----RTRY----SSIFSMAVLGSR 115
Query: 113 KNLCVNSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYE-KAASAAVLP 171
++C+NS+VL + + +++ S +R E+ N C F+ YE +AA P
Sbjct: 116 DHMCLNSQVLQLPSSHA-----QRKLCSQLR----EDRN---CRFYRGYEARAAGRKDFP 163
Query: 172 P--GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKES 229
++ ++DL + G++ G+CPY+ R + A+VV Y Y+ D + E+ S
Sbjct: 164 DELWIHDMEDLVSEGRKCGFCPYYYERDAAKDADVVFLPYNYVFDVSFRKQLPFELSG-S 222
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNLSR 265
V++ DEAHN+ +V A ++++ L A SR
Sbjct: 223 VLIVDEAHNLPSVLGSASCMNLQPLDLANAICECSR 258
>gi|324502086|gb|ADY40918.1| Fanconi anemia group J protein [Ascaris suum]
Length = 962
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 130/281 (46%), Gaps = 15/281 (5%)
Query: 435 CHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLT 494
C +LA F +SV++ SGTL P+D + L + D I V+
Sbjct: 646 CMRPALAYLDAFKECRSVILASGTLCPMDTFRSELGTEFQQMMEGSQVIPSDHIFAAVIP 705
Query: 495 RGSDQLPVSTKF-DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDS 553
G P+ + ++ SD R LL + IVP G++CF SY +D+I +
Sbjct: 706 SGPTGYPLCGTYRNINSDDRFVREISLLLKSVCEIVPKGVLCFLASYRLLDQIYEFMETA 765
Query: 554 GILKEIMQHKLVFIETQDVVETTLALDNYRKA-CDCGR------GAVFFSVARGKVAEGI 606
GIL++I K V E + + + Y +A + R GA+ F+V RGKV+EGI
Sbjct: 766 GILRQIQTIKRVLCEPRRSSQMNEIMAQYEEAITNSARYGPQCTGALMFAVFRGKVSEGI 825
Query: 607 DFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDT---FQIKEGD-FLTFDALRQAAQCV 662
DF R V+ G+PF + + + + ++ D +I GD + T A R Q +
Sbjct: 826 DFADDRARCVVSVGIPFPNAMDEQVSEKKKFNDDNCKKMRILTGDEWYTMQAYRALNQAL 885
Query: 663 GRVIRSKADYGMMIFADKRY---SRHDKRSKLPGWILSHLR 700
GR +R ++D+G ++ D+R + +K+ WI LR
Sbjct: 886 GRCLRHRSDWGAILMVDERLLQRRSNPNATKVSKWIREQLR 926
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 68 VKLIYCTRTVHEMEKTLAELKLL---HNYQTRHLGPAAKILAIGLSSRKNLCVNSRVLAA 124
V + Y TRT ++ + + E L H+ RH ILA SR++ C+N LA
Sbjct: 226 VTIYYGTRTHKQISQVVGEFARLPYGHDGTIRHT-----ILA----SREHSCIN---LAV 273
Query: 125 ENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVL-------PPGVYTL 177
N V+ C++ ++ + +N YEK+ S L V+ +
Sbjct: 274 RNSGDVNGKCKELISAAGVGCSYKN------SMRGKYEKSGSVRKLVSQNLERSDDVWDI 327
Query: 178 QDLRAFGKQQ--GWCPYFLA-RHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFD 234
+DL + K CPYF + R + Q A++V + Y+LDP + S K +VV+ D
Sbjct: 328 EDLVSALKTSSPALCPYFSSTRVLTQDADIVFCPFSYMLDPIIRDN-SDVTLKNAVVILD 386
Query: 235 EAHNIDNVCIEALSVSVRRQTLEGATRNLSRINQEIE 271
EAHN+++VC EA+S S + + G +L + E+E
Sbjct: 387 EAHNVEDVCREAVSFSFTEREIVGTRADLCKKAAEVE 423
>gi|162462746|ref|NP_001104820.1| FancJ-like protein [Bombyx mori]
gi|161339205|dbj|BAF94023.1| FancJ-like protein [Bombyx mori]
Length = 851
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 9/280 (3%)
Query: 448 RFQSVVITSGTLSPIDLYPRLLNFHPVVS-RSFKMSLTRDCICPMVLTRGSDQLPVSTKF 506
+ +S+++ SGTLSP+ L VS + +S R I + S+QL TK
Sbjct: 570 KARSIILASGTLSPVGSMKHELGAEFNVSCLNHVISRERVWIGTLRNCESSEQLKC-TKD 628
Query: 507 DMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVF 566
+M V + GK ++ + + P G++CF SY+ M + W +G+ ++ K +F
Sbjct: 629 NMEKKQ-VQDSIGKAILRVCDVTPHGVLCFHSSYTSMRLLHQRWQQTGLWDKLNSLKYIF 687
Query: 567 IETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYT 626
E+ + + + Y A + RGA+ F+V RGKV+EG+DF R V+ GVPF
Sbjct: 688 KESDNTTDHDEIMKEYYSAAEVDRGAILFAVYRGKVSEGMDFRDRQARAVVTIGVPFPTI 747
Query: 627 LSKILLARLEYLRDTFQIKE----GDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRY 682
+++ +++Y K+ D+ A R Q +GR +R D+G ++ D+R
Sbjct: 748 GDRMVTEKMKYNDKHSNGKKLMRGWDWYNVQAFRAMNQAIGRCVRHLNDWGAVLMIDERI 807
Query: 683 SRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKM 722
+ L W+ L + H D +H R M
Sbjct: 808 AEQRNLEYLSKWVRDFLGNNHFTF--DELMHRQNSLTRFM 845
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 31/214 (14%)
Query: 62 SKPENPVK------LIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNL 115
S +NP K + Y TRT ++++ + E K R + ++I L+ R
Sbjct: 213 SNSQNPPKHERVPVVYYGTRTHKQLQQVIKEFK-------RTVYCKEIRMSI-LAGRDRT 264
Query: 116 CV---NSRVLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPP 172
C+ + +V + +D + A C K +S + A +P +C+F++N + + + LPP
Sbjct: 265 CLMPFDRKVW--KTKDDMCAECIKTKSS---LMNASSPQTSSCKFYDN-RMSLTHSNLPP 318
Query: 173 GVYTLQDLRAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ---KES 229
+ ++DL G + CPYF A+ M A ++ Y YL++P I + M+ ++
Sbjct: 319 A-FDIEDLVEAGAKLKACPYFAAKSMAARAKIIFCPYNYLINP----FIRERMRINLADN 373
Query: 230 VVVFDEAHNIDNVCIEALSVSVRRQTLEGATRNL 263
+VV DE HNI+++C + + ++ R+ + A L
Sbjct: 374 IVVIDEGHNIEDICRDEATCTIERRRISEAVDQL 407
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,225,136,451
Number of Sequences: 23463169
Number of extensions: 452638350
Number of successful extensions: 1124450
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 1400
Number of HSP's that attempted gapping in prelim test: 1111785
Number of HSP's gapped (non-prelim): 7278
length of query: 757
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 606
effective length of database: 8,816,256,848
effective search space: 5342651649888
effective search space used: 5342651649888
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)