Query 004387
Match_columns 757
No_of_seqs 338 out of 2027
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 23:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fvy_A Dipeptidyl-peptidase 3; 100.0 7E-123 2E-127 1064.6 35.2 517 211-737 18-669 (728)
2 3csk_A Probable dipeptidyl-pep 100.0 2E-119 7E-124 1029.8 41.1 512 212-736 15-671 (711)
3 3dup_A MUTT/nudix family prote 99.9 4.2E-26 1.4E-30 242.9 20.5 195 5-211 86-287 (300)
4 2pny_A Isopentenyl-diphosphate 99.9 1.9E-24 6.3E-29 225.2 18.2 161 6-174 35-215 (246)
5 2dho_A Isopentenyl-diphosphate 99.9 3.3E-24 1.1E-28 221.9 19.0 162 5-174 23-204 (235)
6 1hzt_A Isopentenyl diphosphate 99.9 1.8E-23 6.2E-28 208.5 13.4 159 6-174 1-161 (190)
7 2fkb_A Putative nudix hydrolas 99.9 5.3E-21 1.8E-25 188.3 17.7 150 1-165 1-151 (180)
8 1q27_A Putative nudix hydrolas 99.8 2.5E-20 8.4E-25 182.0 16.6 145 4-166 2-151 (171)
9 3i7u_A AP4A hydrolase; nudix p 99.7 2.9E-16 9.8E-21 148.1 14.0 110 37-164 4-113 (134)
10 1sjy_A MUTT/nudix family prote 99.7 1.6E-15 5.3E-20 145.4 18.6 127 29-167 5-134 (159)
11 3grn_A MUTT related protein; s 99.7 2.6E-15 9E-20 143.6 18.1 113 35-162 6-118 (153)
12 3eds_A MUTT/nudix family prote 99.6 2E-16 6.7E-21 151.8 6.2 124 27-165 11-137 (153)
13 3oga_A Nucleoside triphosphata 99.6 4.5E-15 1.5E-19 143.7 14.8 125 32-163 22-149 (165)
14 3r03_A Nudix hydrolase; struct 99.6 4.8E-15 1.7E-19 139.6 14.5 114 35-163 6-119 (144)
15 3u53_A BIS(5'-nucleosyl)-tetra 99.6 6E-15 2.1E-19 141.7 15.3 115 38-164 4-126 (155)
16 1rya_A GDP-mannose mannosyl hy 99.6 8.3E-15 2.8E-19 140.5 15.3 119 37-163 18-138 (160)
17 1ktg_A Diadenosine tetraphosph 99.6 2.1E-14 7.2E-19 134.2 16.6 114 36-164 2-119 (138)
18 3shd_A Phosphatase NUDJ; nudix 99.6 1.7E-14 6E-19 137.5 15.0 108 37-160 5-112 (153)
19 3gwy_A Putative CTP pyrophosph 99.6 6.8E-15 2.3E-19 138.5 11.9 109 38-163 7-116 (140)
20 2pbt_A AP4A hydrolase; nudix p 99.6 1.6E-14 5.6E-19 134.1 14.0 110 37-164 4-113 (134)
21 3hhj_A Mutator MUTT protein; n 99.6 1.6E-14 5.4E-19 138.9 14.2 115 34-163 26-140 (158)
22 2o1c_A DATP pyrophosphohydrola 99.6 2.1E-14 7.1E-19 135.7 14.6 115 37-163 9-132 (150)
23 4dyw_A MUTT/nudix family prote 99.6 1.4E-14 4.9E-19 139.5 13.0 116 33-162 25-140 (157)
24 3fcm_A Hydrolase, nudix family 99.6 5.1E-14 1.8E-18 140.9 16.9 124 33-165 41-169 (197)
25 3exq_A Nudix family hydrolase; 99.6 1.4E-14 4.8E-19 140.2 12.1 115 33-162 6-120 (161)
26 3e57_A Uncharacterized protein 99.6 7E-15 2.4E-19 149.0 10.3 147 22-191 52-207 (211)
27 3ees_A Probable pyrophosphohyd 99.6 2E-14 7E-19 136.4 12.8 109 37-162 21-129 (153)
28 3gg6_A Nudix motif 18, nucleos 99.6 6.9E-15 2.3E-19 141.0 9.3 116 33-164 16-131 (156)
29 2b0v_A Nudix hydrolase; struct 99.5 4.9E-14 1.7E-18 134.1 13.5 113 37-163 8-120 (153)
30 3f6a_A Hydrolase, nudix family 99.5 1.5E-14 5.3E-19 139.2 10.1 114 35-163 4-133 (159)
31 2rrk_A ORF135, CTP pyrophospho 99.5 3.8E-14 1.3E-18 132.6 12.4 109 37-162 8-116 (140)
32 3son_A Hypothetical nudix hydr 99.5 1.4E-13 4.6E-18 130.9 16.1 115 39-164 7-125 (149)
33 2azw_A MUTT/nudix family prote 99.5 5.1E-14 1.7E-18 133.0 12.8 115 36-164 17-131 (148)
34 1vcd_A NDX1; nudix protein, di 99.5 5.8E-14 2E-18 129.1 12.7 106 38-164 3-108 (126)
35 1v8y_A ADP-ribose pyrophosphat 99.5 4.5E-14 1.5E-18 137.7 12.6 113 39-167 36-148 (170)
36 1nqz_A COA pyrophosphatase (MU 99.5 3.4E-14 1.2E-18 141.6 11.9 125 26-164 24-152 (194)
37 1f3y_A Diadenosine 5',5'''-P1, 99.5 2.5E-14 8.7E-19 137.5 10.1 122 32-164 9-146 (165)
38 3i9x_A MUTT/nudix family prote 99.5 3E-14 1E-18 141.3 10.2 119 35-162 25-154 (187)
39 2b06_A MUTT/nudix family prote 99.5 3.3E-14 1.1E-18 135.9 10.1 111 34-163 5-119 (155)
40 3q93_A 7,8-dihydro-8-oxoguanin 99.5 6.4E-14 2.2E-18 137.9 12.1 112 36-163 23-134 (176)
41 3id9_A MUTT/nudix family prote 99.5 5.6E-14 1.9E-18 136.8 11.3 117 32-163 18-135 (171)
42 2pqv_A MUTT/nudix family prote 99.5 6E-14 2.1E-18 134.0 10.9 114 34-163 16-129 (154)
43 3cng_A Nudix hydrolase; struct 99.5 9.4E-14 3.2E-18 138.2 12.4 120 22-161 20-144 (189)
44 2w4e_A MUTT/nudix family prote 99.5 4.8E-14 1.6E-18 134.0 9.7 115 38-166 6-120 (145)
45 3q91_A Uridine diphosphate glu 99.5 5.5E-14 1.9E-18 143.6 10.4 135 23-168 26-193 (218)
46 2kdv_A RNA pyrophosphohydrolas 99.5 3.6E-13 1.2E-17 131.0 15.7 118 35-163 6-135 (164)
47 2yvp_A NDX2, MUTT/nudix family 99.5 2.9E-14 9.9E-19 140.5 7.9 116 38-166 42-157 (182)
48 2fb1_A Conserved hypothetical 99.5 4.1E-14 1.4E-18 145.3 8.8 114 36-162 12-127 (226)
49 2jvb_A Protein PSU1, mRNA-deca 99.5 2.3E-13 7.9E-18 128.6 11.9 112 38-166 5-117 (146)
50 3h95_A Nucleoside diphosphate- 99.5 2.6E-13 8.8E-18 136.1 12.5 116 37-164 26-141 (199)
51 1vk6_A NADH pyrophosphatase; 1 99.5 3.3E-13 1.1E-17 142.0 13.7 118 26-162 124-245 (269)
52 2yyh_A MUTT domain, 8-OXO-DGTP 99.5 3.7E-13 1.2E-17 126.3 12.6 108 37-161 9-119 (139)
53 3gz5_A MUTT/nudix family prote 99.5 1.9E-13 6.4E-18 141.6 11.5 113 36-161 21-137 (240)
54 3o6z_A GDP-mannose pyrophospha 99.5 3.4E-13 1.1E-17 134.6 12.8 120 37-167 45-170 (191)
55 1mk1_A ADPR pyrophosphatase; n 99.5 1.5E-13 5.2E-18 138.8 10.2 130 21-166 31-161 (207)
56 2fvv_A Diphosphoinositol polyp 99.4 2.5E-13 8.6E-18 136.1 11.2 116 34-166 38-153 (194)
57 2fml_A MUTT/nudix family prote 99.4 1.9E-13 6.4E-18 144.3 10.6 117 36-164 38-158 (273)
58 1vhz_A ADP compounds hydrolase 99.4 2.8E-13 9.7E-18 136.1 10.9 113 39-166 51-163 (198)
59 3fk9_A Mutator MUTT protein; s 99.4 4.7E-13 1.6E-17 133.2 12.4 110 37-162 4-113 (188)
60 1g0s_A Hypothetical 23.7 kDa p 99.4 6.7E-13 2.3E-17 134.5 13.6 121 38-167 58-183 (209)
61 3q1p_A Phosphohydrolase (MUTT/ 99.4 1.7E-13 6E-18 138.2 9.2 112 36-163 67-178 (205)
62 1mut_A MUTT, nucleoside tripho 99.4 1.9E-14 6.4E-19 132.7 1.8 108 37-162 5-112 (129)
63 2qjt_B Nicotinamide-nucleotide 99.4 1.5E-12 5E-17 141.6 15.5 121 34-163 205-329 (352)
64 3o8s_A Nudix hydrolase, ADP-ri 99.4 9.8E-13 3.3E-17 132.8 12.4 110 37-163 70-179 (206)
65 2qjo_A Bifunctional NMN adenyl 99.4 1.4E-12 4.7E-17 141.0 12.3 119 34-163 200-322 (341)
66 3f13_A Putative nudix hydrolas 99.4 3E-12 1E-16 124.6 13.1 97 34-157 13-109 (163)
67 1k2e_A Nudix homolog; nudix/MU 99.4 5.2E-12 1.8E-16 121.3 13.1 55 38-100 2-56 (156)
68 1x51_A A/G-specific adenine DN 99.3 2.8E-12 9.4E-17 122.8 9.5 99 49-163 33-133 (155)
69 2a6t_A SPAC19A8.12; alpha/beta 99.3 1.9E-12 6.5E-17 136.5 8.0 111 38-164 102-213 (271)
70 2dsc_A ADP-sugar pyrophosphata 99.3 4.6E-12 1.6E-16 128.4 10.4 118 38-165 62-185 (212)
71 1u20_A U8 snoRNA-binding prote 99.3 5E-12 1.7E-16 128.4 8.4 127 22-162 18-164 (212)
72 3fjy_A Probable MUTT1 protein; 99.2 3.8E-11 1.3E-15 131.6 11.0 107 49-164 37-159 (364)
73 3qsj_A Nudix hydrolase; struct 99.2 1.2E-10 4.3E-15 119.7 13.3 124 38-170 9-195 (232)
74 3fsp_A A/G-specific adenine gl 99.1 1.8E-10 6.3E-15 126.5 12.0 104 38-162 241-344 (369)
75 1q33_A Pyrophosphatase, ADP-ri 99.0 1.1E-09 3.7E-14 116.6 12.2 105 51-161 140-260 (292)
76 2xsq_A U8 snoRNA-decapping enz 98.9 1.2E-09 4.1E-14 111.4 4.9 97 50-161 65-171 (217)
77 3kvh_A Protein syndesmos; NUDT 98.5 1E-07 3.5E-12 93.8 5.7 120 25-160 8-146 (214)
78 3rh7_A Hypothetical oxidoreduc 98.4 5.3E-07 1.8E-11 97.0 8.8 91 38-162 184-275 (321)
79 3bho_A Cleavage and polyadenyl 98.3 4.9E-06 1.7E-10 82.8 11.7 117 32-161 54-183 (208)
80 2ovx_A Matrix metalloproteinas 68.4 0.93 3.2E-05 43.1 -0.3 17 572-588 111-127 (159)
81 1cge_A Fibroblast collagenase; 66.5 1.1 3.8E-05 43.0 -0.3 18 571-588 110-127 (168)
82 2xs4_A Karilysin protease; hyd 65.5 1 3.4E-05 43.2 -0.8 18 571-588 114-131 (167)
83 2jsd_A Matrix metalloproteinas 65.4 1 3.5E-05 42.7 -0.7 18 571-588 107-124 (160)
84 1hy7_A Stromelysin-1, MMP-3; m 64.1 1.1 3.9E-05 43.1 -0.7 18 571-588 112-129 (173)
85 1hv5_A Stromelysin 3; inhibiti 62.1 1.5 5.1E-05 41.9 -0.3 18 571-588 112-129 (165)
86 1slm_A Stromelysin-1; hydrolas 55.4 2.2 7.7E-05 43.8 -0.3 18 571-588 194-211 (255)
87 1i76_A MMP-8;, neutrophil coll 51.6 2.4 8.2E-05 40.4 -0.8 17 572-588 112-128 (163)
88 3ayu_A 72 kDa type IV collagen 50.8 2.9 0.0001 40.0 -0.3 17 572-588 114-130 (167)
89 1y93_A Macrophage metalloelast 49.3 3.2 0.00011 39.4 -0.3 17 572-588 108-124 (159)
90 3p1v_A Metallo-endopeptidase; 45.8 4.7 0.00016 44.1 0.3 16 571-586 286-301 (407)
91 2w15_A Zinc metalloproteinase 44.1 4.4 0.00015 39.8 -0.3 16 572-587 136-151 (202)
92 1kuf_A Atrolysin E, metallopro 42.5 4.8 0.00016 39.6 -0.3 16 572-587 138-153 (203)
93 2y6d_A Matrilysin; hydrolase; 42.4 4.1 0.00014 39.3 -0.8 17 572-588 115-131 (174)
94 830c_A MMP-13, MMP-13; matrix 42.4 4.7 0.00016 38.7 -0.3 17 572-588 113-129 (168)
95 1rm8_A MMP-16, matrix metallop 41.0 4.5 0.00015 38.6 -0.7 18 571-588 116-133 (169)
96 2ddf_A ADAM 17; hydrolase; HET 41.0 5.3 0.00018 40.7 -0.3 16 572-587 182-197 (257)
97 1qua_A Acutolysin-C, hemorrhag 40.6 5.4 0.00018 39.0 -0.3 16 572-587 135-150 (197)
98 1bud_A Protein (acutolysin A); 40.4 5.4 0.00019 39.0 -0.3 16 572-587 133-148 (197)
99 1atl_A Atrolysin C; metalloend 40.2 5.3 0.00018 39.2 -0.4 15 573-587 137-151 (202)
100 1yp1_A FII; FII hydrolase; 1.9 40.0 5.5 0.00019 39.1 -0.3 15 573-587 136-150 (202)
101 3b8z_A Protein adamts-5; alpha 40.0 5.6 0.00019 39.5 -0.3 15 573-587 142-156 (217)
102 1sat_A Serratia protease; para 39.6 5 0.00017 45.0 -0.8 16 573-588 171-186 (471)
103 3nxq_A Angiotensin-converting 39.6 28 0.00095 40.3 5.4 55 573-634 356-413 (629)
104 1kap_P Alkaline protease; calc 39.3 5 0.00017 45.0 -0.8 17 572-588 179-195 (479)
105 4dd8_A Disintegrin and metallo 38.5 6.1 0.00021 39.0 -0.3 14 573-586 134-147 (208)
106 1g9k_A Serralysin; beta jelly 37.9 5.5 0.00019 44.5 -0.8 17 572-588 163-179 (463)
107 1k7i_A PROC, secreted protease 36.7 5.8 0.0002 44.5 -0.8 16 573-588 183-198 (479)
108 3ma2_D Matrix metalloproteinas 36.6 6.6 0.00023 38.2 -0.3 17 572-588 122-138 (181)
109 2v4b_A Adamts-1; zymogen, prot 35.7 7.2 0.00024 40.7 -0.3 16 572-587 143-158 (300)
110 2jvf_A De novo protein M7; tet 34.5 48 0.0016 27.0 4.5 46 391-436 16-72 (96)
111 1r55_A ADAM 33; metalloproteas 34.5 7.7 0.00026 38.4 -0.3 15 573-587 137-151 (214)
112 2rjp_A Adamts-4; metalloprotea 34.4 7.7 0.00026 40.8 -0.3 16 572-587 143-158 (316)
113 2i47_A ADAM 17; TACE-inhibitor 34.1 7.9 0.00027 40.2 -0.3 16 572-587 188-203 (288)
114 1l6j_A Matrix metalloproteinas 33.3 8.1 0.00028 42.6 -0.3 17 572-588 376-392 (425)
115 2rjq_A Adamts-5; metalloprotea 32.1 8.9 0.00031 41.4 -0.3 16 572-587 143-158 (378)
116 1c7k_A NCNP, zinc endoprotease 31.0 8 0.00027 35.7 -0.7 15 573-587 78-92 (132)
117 3k7n_A K-like; SVMP, hydrolase 28.6 11 0.00038 41.1 -0.3 15 572-586 139-153 (397)
118 2e3x_A Coagulation factor X-ac 27.9 13 0.00045 40.9 0.2 16 573-588 140-155 (427)
119 3ba0_A Macrophage metalloelast 27.7 10 0.00035 40.9 -0.8 17 572-588 107-123 (365)
120 3k7l_A Atragin; SVMP, metallop 27.4 12 0.00041 41.2 -0.3 15 572-586 144-158 (422)
121 1eak_A 72 kDa type IV collagen 26.9 12 0.00042 41.1 -0.3 16 573-588 367-382 (421)
122 2ero_A VAP-1, vascular apoptos 26.8 13 0.00043 41.1 -0.3 16 573-588 147-162 (427)
123 2dw0_A Catrocollastatin; apopt 26.0 13 0.00045 40.8 -0.3 16 573-588 138-153 (419)
124 3lqb_A Hatching enzyme, LOC792 25.6 12 0.0004 37.0 -0.7 18 572-589 93-110 (199)
125 4axq_A Archaemetzincin; metall 25.2 13 0.00045 35.5 -0.4 17 572-588 114-130 (163)
126 3edh_A Bone morphogenetic prot 24.8 13 0.00043 36.8 -0.6 18 572-589 87-104 (201)
127 1su3_A Interstitial collagenas 23.5 15 0.00053 40.7 -0.3 17 572-588 193-209 (450)
128 2cki_A Ulilysin; metalloprotea 21.6 18 0.0006 37.3 -0.3 18 572-589 162-179 (262)
129 3lq0_A Proastacin; metallopept 20.2 15 0.0005 37.3 -1.3 16 573-588 121-136 (235)
130 2x7m_A Archaemetzincin; metall 20.2 19 0.00066 35.3 -0.4 17 572-588 139-155 (195)
131 1uze_A Angiotensin converting 20.1 54 0.0019 37.5 3.3 52 575-633 344-398 (589)
No 1
>3fvy_A Dipeptidyl-peptidase 3; SGC, DPP3, alternative splicing, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, phosphoprotein; 1.90A {Homo sapiens} PDB: 3t6b_A 3t6j_A
Probab=100.00 E-value=6.7e-123 Score=1064.58 Aligned_cols=517 Identities=17% Similarity=0.220 Sum_probs=440.2
Q ss_pred ccccchhccCCCHHHHHHHHHHHHHHhhhchheeeeccCCChhHHHHHHhccccc------h------hhHHh----HH-
Q 004387 211 HVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADAS------E------LDKLK----WM- 273 (757)
Q Consensus 211 pv~l~~df~~Ls~~Ek~y~~~l~~Aa~~~~~i~~~Q~~~e~~~i~~~i~~~~~~~------~------~~~~~----~~- 273 (757)
...++..|+.||++||+|||||++|||.|.||+++|+||||+.||++|..+.... . .++.+ ++
T Consensus 18 ~L~~~~~F~~Lt~keK~Yah~ls~Aa~~G~~I~l~Q~s~es~~I~~ll~~i~~~~~~~~~~~~~~~~~~~~~e~~~fl~Y 97 (728)
T 3fvy_A 18 SLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYALLSRLFRAQDPDQLHQHALAEGLTEEEYQAFLVY 97 (728)
T ss_dssp ECCCHHHHHTSCHHHHHHHHHHHHHHHHHHTHHHHTTCSSHHHHHHHHHHHHHHSCHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEehHHhHhhCCHHHHHHHHHHHHHHHcCCCEEEEeCCcccHHHHHHHHHHHHhCCchhHHHHHHhcCCCHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999999999999884211 1 11222 23
Q ss_pred --HHHhcCCCCCCCCCCCcCccCcc-hhhhhcCCCC--------CCcCcccccc---ccc----cCCCCCCCC-CCCCCC
Q 004387 274 --YYLINKSPWSSLDENEAFLTTAD-SAVKLLPDAT--------KPVNGWKGLE---YKA----SFPLPKPPG-ANFYPP 334 (757)
Q Consensus 274 --~f~~n~Gn~~~~~gd~kFip~~~-~~~~~l~~~~--------~~~~~~~~~~---~~~----~~~~~~~~g-s~yYp~ 334 (757)
.|+.|+|||++| ||+||||+|+ +.|++|++.. ...++|+.|. |+. ...+.+++| |||||+
T Consensus 98 ~~~f~~n~Gny~~f-Gd~KfiP~~s~~~f~~l~~~s~~~~~~~~~~~~l~~~~~~~if~~~~~~~~lg~~~~g~s~YY~~ 176 (728)
T 3fvy_A 98 AAGVYSNMGNYKSF-GDTKFVPNLPKEKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSG 176 (728)
T ss_dssp HHHHHHHTSSBCTT-TCBBCCCSSCHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHHHHCCCGGGSBBCSGGGCBCSSBCT
T ss_pred HHHHHhccCCccCC-CCCCcCCCCCHHHHHHHHHhCchhhccchhHHHHHHHhhHHhccCCcccccCCCCCCCccCCCCC
Confidence 379999999997 9999999999 6899998532 2356788876 321 223445677 999988
Q ss_pred CCCHHHHHHHHhhccHhhhhhccCCceEEEecC--Cc-----ccccCcccccccc--C----CCccccCCceEEeecccc
Q 004387 335 DMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS--EF-----NLDSSLSGHIVDA--T----NHSVGSIYDLYSVPYSEE 401 (757)
Q Consensus 335 ~it~~e~~~~~~~~~~~~~~~~~~~~t~i~r~~--~~-----~l~as~~~~~~~~--~----~~~~~~~g~~~~~~y~g~ 401 (757)
+||++|+++++++| +.+++.++||||+|.. ++ .|+||+++..... . ......+|+.+.+.| ||
T Consensus 177 ~iT~~eie~v~~~~---~~~~i~~~NTRl~K~~~~~g~~~~~i~~AS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gd 252 (728)
T 3fvy_A 177 NCTMEDAKLAQDFL---DSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQVTR-GD 252 (728)
T ss_dssp TCCHHHHHHHHHHH---HHTTCCSTTEEEEEEECTTCCEEEEEEEECSSCCC----CTTGGGCSEEEETTEEEEEEE-EE
T ss_pred CCCHHHHHHHHHHH---HhCCCchhcceEEEEecCCCcceEEEEEEeecccCCccccccccccccccccCceeeecC-Cc
Confidence 99999999999998 4677899999999972 32 2899987542111 0 011123578899986 99
Q ss_pred cHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHcccCch---hhhhHHHhhc----------------------CCcee
Q 004387 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY---YDSDIAWIEL----------------------ATFEA 456 (757)
Q Consensus 402 y~~~l~~i~~~L~~A~~~a~n~~q~~~L~~~~~~f~tg~~---~~s~~~Wv~d----------------------a~~E~ 456 (757)
|+++|++||.+|++|++||+|++|++||.+||++|+||++ ++||++||+| |||||
T Consensus 253 y~~~l~ki~~~L~kA~~~A~N~~qk~~L~~yi~~F~TGdl~~~k~s~~~WvkD~~p~VE~~iGFIEtYrDP~G~Rae~Eg 332 (728)
T 3fvy_A 253 YAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPFGSRGEFEG 332 (728)
T ss_dssp THHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSCSCSEEEEEEEEECSSSTTSCSCEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCceeeeecCceecCCCCCCceeEEE
Confidence 9999999999999999999999999999999999999966 7899999998 99999
Q ss_pred EeeeeChHHHHHHHHHhhhHHHHHHhCCCCcccccCCCCCCCcceehhhhhcCCCCCCceeeecCCCchhHHhccceeEE
Q 004387 457 FIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMV 536 (757)
Q Consensus 457 ~V~i~d~~~s~k~~~l~~~a~~~~~~LPw~~~~ek~~~~~~~~~~~~vl~~ag~~~~~~~~giNlPN~~~ir~~~G~Knv 536 (757)
||+|+|+++|+||++|+++||+||++|||+++|||++|.+||||||+||+||||+ +|||||||||||||+++|||||
T Consensus 333 fVai~d~e~T~kl~~lv~~a~~~~~~LPw~~~feKd~f~~pdftsl~vl~~aGsg---~p~GINLPNyd~IR~~~GfKnV 409 (728)
T 3fvy_A 333 FVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTPDFTSLDVLTFAGSG---IPAGINIPNYDDLRQTEGFKNV 409 (728)
T ss_dssp EEEECCHHHHHHHHHHHHTHHHHHHTSSSCGGGSCSSCCCCCCCEEEEEEEESSC---CCSEEEECCCHHHHHHTCCEEE
T ss_pred EEEEeCHHHHHHHHHHHHHHHHHHHhCCCCchhccCccCCCCceEEEeHhhcCCC---CccceeCCChHHHHHhcCeeEE
Confidence 9999999999999999999999999999999999999999999999999999995 6999999999999999999999
Q ss_pred EeccchhhccccccccccccccCHhhHHhhhcc---cchhhhhhhhc-ccCCCCCCcccC----------------C---
Q 004387 537 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFD---SFFTHNICHEC-CHGIGPHSITLP----------------D--- 593 (757)
Q Consensus 537 ~l~N~~~a~~~~~~~~~~~~~i~~~~~~~~~~~---af~~~v~lHEl-gHg~Gk~~~~~~----------------~--- 593 (757)
+|+|||+|++.....+ ..||+++|++++.++ +|++||+|||| ||||||++...+ |
T Consensus 410 sLgNvl~A~~~~~~~~--i~fi~~~~~~l~~k~~~~af~~~v~lHElLGHGsGkll~~~~~G~~NFD~~~~~~p~tg~~i 487 (728)
T 3fvy_A 410 SLGNVLAVAYATQREK--LTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPETGEQI 487 (728)
T ss_dssp EEHHHHTTSSCCSGGG--CTTBCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCBBCTTSCBSSCTTTCBCTTTSSBC
T ss_pred EeeeehhhhhcccccC--CCccCHHHHHHHHHhccchHhHHHHHHHhccCcCCcccccCCCCccccccccCCCCCCCCcc
Confidence 9999999987432223 259999999998765 89999999999 999999654221 1
Q ss_pred ----cccccccchhhcccchHHhHHHHHHHHHHH--HHHHhc-CCCChhhhhHHHHHHHHH---HHhhccc------Ccc
Q 004387 594 ----GRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGR-DLLPKSLVKSMYVSFLAG---CFRSVRF------GLE 657 (757)
Q Consensus 594 ----g~~~t~~~~~~~~~s~~EE~rAd~vglyl~--~~ll~~-G~~~~~~~~~~y~~~l~~---~~~~l~~------~~~ 657 (757)
.+|+||+++||+++||+||||||+|||||| ++|+++ |+.+.++.+++|++||+| |+++++| +|+
T Consensus 488 ~swY~pgeT~~s~fg~~ast~EEcRAdlvgLYl~~~~~lleifG~~~~~a~d~~Y~~~L~~~~~Gl~~l~f~~p~~~~w~ 567 (728)
T 3fvy_A 488 QSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAGLLALEFYTPEAFNWR 567 (728)
T ss_dssp CCCBCTTCCHHHHSTTTHHHHHHHHHHHHHHHHTTCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHGGGGEEGGGTEES
T ss_pred eeeccCCCcHHHHHhcccchHHHHHHHHHHHHHcCCHHHHHHcCCCccchhhhHHHHHHHHHHHhhheeeeecCCCCcch
Confidence 158999999999999999999999999999 679999 998767889999999976 6789998 299
Q ss_pred chhhhHHHHHHHHHHhcCC-eE---Ec--cC----CcEEEeHhhHH----HHHHHHHHHHHHHHhcCCHHHHHHHHHHhc
Q 004387 658 ESHGKGQALQFNWLFEKEA-FI---LH--SD----DTFSVDFDKVE----GAVESLSTEILTIQARGDKEAASLLLQKYC 723 (757)
Q Consensus 658 qaH~~a~~~i~~~~~e~g~-~~---~~--~~----g~~~vd~~k~~----~av~~ll~~l~~~k~~gD~~~~~~~~~~~~ 723 (757)
||||||||+|+|||+|+|. |+ .+ ++ ++++||++||+ +||++||++||+||||||+++|++||++|+
T Consensus 568 qAH~qar~~il~~lle~G~~~v~~~~~~~~~g~~~~~i~vD~sKi~~~g~~avg~lL~~l~~~KstgD~~aa~~l~e~y~ 647 (728)
T 3fvy_A 568 QAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYA 647 (728)
T ss_dssp CHHHHHHHHHHHHHHHTCTTSEEEEEEECTTSSEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHcCCCeEEEEEecccCCCCcEEEEeeHHHHhhhhHHHHHHHHHHHHeeeecCCHHHHHHHHHhcc
Confidence 9999999999999999996 43 22 13 45789999995 699999999999999999999999999999
Q ss_pred CCCHH-------HHH-HHHHhh
Q 004387 724 TMTQP-------LKV-ALQKLE 737 (757)
Q Consensus 724 ~v~~~-------~~~-~l~~~~ 737 (757)
+|+++ +++ ||+|.+
T Consensus 648 ~v~~~~~~~~~~~r~iVl~rk~ 669 (728)
T 3fvy_A 648 TVTDAPPECFLTLRDTVLLRKE 669 (728)
T ss_dssp CCCCCTTTCHHHHHHHHHHTCC
T ss_pred ccCcccchhHHHHHHHHHhccC
Confidence 99876 555 776654
No 2
>3csk_A Probable dipeptidyl-peptidase 3; Zn-hydrolase, aminodipeptidase, hexxgh-motif, aminopeptidase hydrolase, metal-binding, metalloprotease; 1.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-119 Score=1029.82 Aligned_cols=512 Identities=16% Similarity=0.213 Sum_probs=438.2
Q ss_pred cccc-hhccCCCHHHHHHHHHHHHHHhhhchheeeeccCCChhHHHHHHhcccc--ch------hhHHh----HH---HH
Q 004387 212 VSLN-AELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA--SE------LDKLK----WM---YY 275 (757)
Q Consensus 212 v~l~-~df~~Ls~~Ek~y~~~l~~Aa~~~~~i~~~Q~~~e~~~i~~~i~~~~~~--~~------~~~~~----~~---~f 275 (757)
.+++ ++|+.||++||+|||||++|||.|.||+++|+||||+.||++|..+... .. .++.+ ++ .|
T Consensus 15 l~~~~~~F~~Lt~keK~yahyls~As~~G~~I~~~Q~spes~~I~~ll~~i~~~~~~~~~~~~g~~~~e~~~~l~Y~~~f 94 (711)
T 3csk_A 15 LSVKTEYFPQLTDKEQKYAHFMSKASHAGSRVVMRQVSHESEPIFDLILAIHSKLNGKYPEDDITQKQQTGLYLEYVSQF 94 (711)
T ss_dssp CCCTTTTGGGSCHHHHHHHHHHHHHHHTTHHHHHHHHCTTHHHHHHHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEechHhhhhCCHHHHHHHHHHHHHHhcCCceeEeecCcCcHHHHHHHHHHHHhcCcchhhhcCCCHHHHHHHHHHHHHH
Confidence 3456 8899999999999999999999999999999999999999999988421 11 12222 22 37
Q ss_pred HhcCCCCCCCCCCCcCccCcc-hhhhh---cCC-CCCCcCccc--------------------cccccccCCCC------
Q 004387 276 LINKSPWSSLDENEAFLTTAD-SAVKL---LPD-ATKPVNGWK--------------------GLEYKASFPLP------ 324 (757)
Q Consensus 276 ~~n~Gn~~~~~gd~kFip~~~-~~~~~---l~~-~~~~~~~~~--------------------~~~~~~~~~~~------ 324 (757)
+.|+|||++| ||+||||+++ +.|++ |++ ++...++|+ .|. ..||...
T Consensus 95 ~~n~Gny~~f-Gd~KfiP~~~~e~f~~~l~lv~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-~~if~~~~~~~~l 172 (711)
T 3csk_A 95 LSNLGNFKSF-GDTKFIPRCEVKFFKQLLELAKINPSSSPLTLSPVDVNHEFTSHHLFSTINELID-IGIYHVEEKAALL 172 (711)
T ss_dssp HHHTSSBCTT-TCBBCBCSSCHHHHHHHHHHTTCCTTSCGGGGSCTTSCGGGSSGGGCSSHHHHHH-TTTTCCCTTTTBB
T ss_pred HhccCCcccC-CcccccCCCCHHHHHHHHHHHHhCchhhhhhhccccccccchhhhhhhhhHhhhc-CceecCCcchhhc
Confidence 9999999997 9999999999 68988 774 455667776 233 3455433
Q ss_pred --CCCC--CCCCCC-CCCHHHHHHH-HhhccHhhhhhccCCceEEEecCCc---ccccCc-cccccc--cCCC--ccccC
Q 004387 325 --KPPG--ANFYPP-DMDKMEFELW-KSSLTEKQQEDATSFFTVIKRRSEF---NLDSSL-SGHIVD--ATNH--SVGSI 390 (757)
Q Consensus 325 --~~~g--s~yYp~-~it~~e~~~~-~~~~~~~~~~~~~~~~t~i~r~~~~---~l~as~-~~~~~~--~~~~--~~~~~ 390 (757)
++.| |||||+ +||++|++++ ++.| +.+++.++||||+|..+. .|+||+ ++.+.. ...+ ....+
T Consensus 173 g~~~~g~~s~YY~~~~iT~~eie~~~~~~~---~~~~~~p~NtRl~K~~~~~~ei~~AS~~~~~~~~~~~~~~~~~~~~~ 249 (711)
T 3csk_A 173 GFPSQGYTSAYYLGLPVTPEDMALLKEQLF---AELAILPENTRINKVGENSFQIWVASENVKNQITETYPSGQITLSNA 249 (711)
T ss_dssp SCGGGTCBCTTEEESCCCHHHHHHHHHHTH---HHHTCCCTTEEEEEEETTEEEEEEECSCSSCCCTTTSCCSEEECTTS
T ss_pred CCCCCCceeecCCCCCCCHHHHHHHHHHhh---hhcCCcccceeEEecCCCeEEEEEeeccccCCccccccccccccccC
Confidence 3456 899986 8999999999 8988 467899999999998653 289998 554321 1111 11236
Q ss_pred CceEEeecccccHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHcccC---chhhhhHHHhhc----------------
Q 004387 391 YDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN---NYYDSDIAWIEL---------------- 451 (757)
Q Consensus 391 g~~~~~~y~g~y~~~l~~i~~~L~~A~~~a~n~~q~~~L~~~~~~f~tg---~~~~s~~~Wv~d---------------- 451 (757)
|..+.+.| |||+++|++||.+|++|++||+|++|++||.+||++|+|| +|++||++||+|
T Consensus 250 g~~v~~~~-Gdy~~~l~ki~~~L~kA~~~a~N~~q~~~L~~~i~~F~TGsl~~~~~s~~~WvkD~~p~VE~~iGFiEtY~ 328 (711)
T 3csk_A 250 VTKVEFIF-GDHSREMRLVASYLKEAQKFAANDTQKAMLQEYINHFVTGSSQAHKEAQKLWVKDISPVIETNIGFIETYR 328 (711)
T ss_dssp CCEEEEEE-EETHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCSCSEEEEEEEEECSS
T ss_pred CceEEEec-CchHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhccCCceEEeecCceecc
Confidence 88888886 9999999999999999999999999999999999999998 699999999998
Q ss_pred ------CCceeEeeeeChHHHHHHHHHhhhHHHHHHhCCCCcccccCCCCCCCcceehhhhhcCCCCCCceeeecCCCch
Q 004387 452 ------ATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 525 (757)
Q Consensus 452 ------a~~E~~V~i~d~~~s~k~~~l~~~a~~~~~~LPw~~~~ek~~~~~~~~~~~~vl~~ag~~~~~~~~giNlPN~~ 525 (757)
|||||||+|+|+++|+||++|+++||+||++|||+++|||+.|.+|||||||||+|||| ++|+||||||||
T Consensus 329 DP~G~Rae~EgfVai~d~e~s~k~~~lv~~a~~~~~~LPw~~~fekd~f~~pdftsl~vl~~aGs---g~p~GINLPN~d 405 (711)
T 3csk_A 329 EPSGIIGEFESLVAIQNKERTAKFSSLVNNAEEFISLLPWSKDYEKPIFNPPDFTSLEVLTFTGS---GIPAGINIPNYD 405 (711)
T ss_dssp STTSCSCEEEEEEEECCHHHHHHHHHHHHTHHHHHHHSSSCGGGSCSSCCCCCCCEEEEEEEESS---CCCSEEEECCCH
T ss_pred CCCCCceeeEEEEEEeCHHHHHHHHHHHHHHHHHHHhCCCChhhcccccCCCCceeeehhhhcCC---CccceeECCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999 479999999999
Q ss_pred hHHhccceeEEEeccchhhc---cccccccccccccCHhhHHhhhcc---cchhhhhhhhc-ccCCCCCCcccC------
Q 004387 526 RIVKDRGTSMVMLKNVSEAK---FKNILRPIADVCIRKEQQELVDFD---SFFTHNICHEC-CHGIGPHSITLP------ 592 (757)
Q Consensus 526 ~ir~~~G~Knv~l~N~~~a~---~~~~~~~~~~~~i~~~~~~~~~~~---af~~~v~lHEl-gHg~Gk~~~~~~------ 592 (757)
|||+++|||||+|+|+|+|+ +. ..|+ .||+++|++++.+| +|++||+|||| ||||||++....
T Consensus 406 ~IR~~~G~KnVsLgNv~~A~~~~~~--~~~i--~fi~~~~~~~~~ky~~~af~~~v~lHElLGHGsGkl~~~~~~g~NFd 481 (711)
T 3csk_A 406 DVRLKIGFKNVSLGNILSAAAKSSS--KHPP--SFISQEDRPIFEKYQSDSFEVQVDIHELLGHGSGKLLTEFTDGFNFD 481 (711)
T ss_dssp HHHHHTCCEEEEEHHHHHHHHHTCC--SSCC--TTBCTTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCBEETTEESSC
T ss_pred HHHHhcCeeEEEEeeeecccccccc--CCcc--eeeCHHHHHHHHHhccccHhhhHhHHHhccccccccccccCCCcccc
Confidence 99999999999999999998 43 2444 59999999999866 89999999999 999999664311
Q ss_pred ---------C-------cccccccchhhcccchHHhHHHHHHHHHHH--HHHHhc-CCCCh-hhhhHHHHHHHHH---HH
Q 004387 593 ---------D-------GRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGR-DLLPK-SLVKSMYVSFLAG---CF 649 (757)
Q Consensus 593 ---------~-------g~~~t~~~~~~~~~s~~EE~rAd~vglyl~--~~ll~~-G~~~~-~~~~~~y~~~l~~---~~ 649 (757)
| .+|+||+++||+++|||||||||+|||||| ++++++ |+.+. ++.+++|++||.| |+
T Consensus 482 ~~~~~~~ltg~~i~twY~pG~T~~s~fg~~ast~EEcRAdlvgLYl~~d~~~leifG~~~~~~~~~~~Y~~yL~m~~aGl 561 (711)
T 3csk_A 482 KENPPLGLDGKPVSTYYKVGETWGSKFGQLAGPFEECRAEVIAMFLLTNKKILDIFGFHDVESQDKVIYAGYLQMARAGL 561 (711)
T ss_dssp SSSCCBCTTSSBCCCCBCTTCCHHHHHGGGHHHHHHHHHHHHHHHHTTCHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCccceecCCCCcHHHHHhhhhhhHHHHHHHHHHHHHhcCccHHHHcCCCchhhHHHHHHHHHHHHHHhhc
Confidence 1 168999999999999999999999999999 789995 99884 6889999999865 78
Q ss_pred hhcccC------ccchhhhHHHHHHHHHHhcCC----eE--EccCC---cEEEeHhhH----HHHHHHHHHHHHHHHhcC
Q 004387 650 RSVRFG------LEESHGKGQALQFNWLFEKEA----FI--LHSDD---TFSVDFDKV----EGAVESLSTEILTIQARG 710 (757)
Q Consensus 650 ~~l~~~------~~qaH~~a~~~i~~~~~e~g~----~~--~~~~g---~~~vd~~k~----~~av~~ll~~l~~~k~~g 710 (757)
++|+|+ |+||||||||+|+|||+++|. +. .+++| ++++||+|| ++||++||++||+|||||
T Consensus 562 ~sL~f~~p~~~kw~qAH~~ar~~il~~lle~G~~~~~v~i~~~~~g~~~~i~~D~sKi~~~g~~avg~lL~~lq~~Kstg 641 (711)
T 3csk_A 562 LALEYWNPKTGKWGQPHMQARFSIMKTFMKHSTDKNFLKLEMNSTNDDFAIKLDKSLIKTAGHECVKDYLKHLHVYKCSG 641 (711)
T ss_dssp HGGGGBCTTTCCBSCHHHHHHHHHHHHHHHSSSSTTSEEEEECTTSSCEEEEECGGGTTTHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEECCCCCccchhhHHHHHHHHHHHHHcCCCCceEEEEEcCCCCeEEEEecHHHHHhhHHHHHHHHHHHHHhhhhcc
Confidence 999983 999999999999999999983 33 23355 468899999 569999999999999999
Q ss_pred CHHHHHHHHHHhcCCCHH---HHH-HHHHh
Q 004387 711 DKEAASLLLQKYCTMTQP---LKV-ALQKL 736 (757)
Q Consensus 711 D~~~~~~~~~~~~~v~~~---~~~-~l~~~ 736 (757)
|+++|++||++|+.|+++ +++ ||+|.
T Consensus 642 D~~aa~~l~e~y~~Vd~~~~~lr~~Vl~rk 671 (711)
T 3csk_A 642 DVEQGSKYFIDRSTVTPDLASLRDIVLSKR 671 (711)
T ss_dssp CHHHHHHHHHHHTCCCHHHHTTHHHHHHTC
T ss_pred CHHHHHHHHHHhccCCHHHHHHHHHHHhcc
Confidence 999999999999999994 555 77776
No 3
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.94 E-value=4.2e-26 Score=242.93 Aligned_cols=195 Identities=15% Similarity=0.019 Sum_probs=164.4
Q ss_pred ccccccEEEEcCCC-CcccccccccccccCCceeEEEEEEEEecCCC---EEEEEEeCCCCCCCCCCeeeccccccCCCC
Q 004387 5 VVQEEHLDVLTMTG-QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ---ELLLQRRADFKDSWPGMWDISSAGHISAGD 80 (757)
Q Consensus 5 ~~~~E~~~vvd~~~-~~~G~~~~R~~~h~~g~~hrav~viV~n~~~g---~ILL~rRs~~k~~~pG~W~lPvGG~ve~GE 80 (757)
.+++|+++|||.++ ++++. ++|..+|.+|++|++|++.+++. ++ ++||+||+..|.+|||+|+..||||+++||
T Consensus 86 gwr~E~~~V~~~~~~~~~~~-~eR~~~~~~G~~~~~vh~~~~~~-~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GE 163 (300)
T 3dup_A 86 APRGELYRVNQSWGEPTLML-LDRAVVPTFGVRAYGVHLNGYVG-AGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADL 163 (300)
T ss_dssp CCCSCEEEECSSTTSCCCEE-EEGGGTGGGTCCEEEEEEEEEES-CGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTS
T ss_pred ccccccEEeecCCCCeeeEE-EEhhhccccceEEEEEEEEEEEe-cCCeeEEEEEeCCCcccCCCCccccccccCCCCCC
Confidence 57999999999986 67774 89999999999999999999995 55 899999999999999999988899999999
Q ss_pred CHHHHHHHHHHHHhCCccCC-CceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHH
Q 004387 81 SSLISAQRELQEELGINLPK-DAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159 (757)
Q Consensus 81 t~~eAAiREl~EEtGI~v~~-~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~E 159 (757)
|+.+||+||+.||+||++.. ..+..++.+.|....+.| ..+++.++|.+.++.+.. +.++++|+++++|++++|
T Consensus 164 s~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G--~~~E~~~vy~~~l~~~~~---p~~~~~EV~~~~~v~~~E 238 (300)
T 3dup_A 164 SLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAG--IKPDTLFLYDLALPEDFR---PHNTDGEMADFMLWPAAK 238 (300)
T ss_dssp CHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTE--EEEEEEEEEEEECCTTCC---CCCTTSSEEEEEEEEHHH
T ss_pred CHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCC--eEEEEEEEEEEEecCCCc---CCCCchHhheEEEECHHH
Confidence 99999999999999998642 246677776665544443 467888999888765432 367889999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCchHHHHHHHHHH--hhhhhhhhHHHHHHHHhhhhc
Q 004387 160 YKNLLAKDDPSFVPYDVNGGYGQLFNIISQR--YKENTMERSLTLQKQLRRYAH 211 (757)
Q Consensus 160 L~~~l~~~~~~f~p~~~~~~~~~~f~~l~~~--~~~~~~~r~~~L~~rl~r~~p 211 (757)
+.+.+.+ ++.|+||+ ...+++++.++ +++.+++.+.+|.+++++..-
T Consensus 239 l~~~l~~-pg~F~p~~----~lV~ldfl~RhG~i~~~~~~~y~~i~~~l~r~~~ 287 (300)
T 3dup_A 239 VVEAVRT-TEAFKFNV----NLTVIDFAIRHGLIDPDNEPDYQEILAGLRGRPR 287 (300)
T ss_dssp HHHHHHH-CCCBCTTH----HHHHHHHHHHTTSSCTTTSTTHHHHHHHTBCC--
T ss_pred HHHHHhc-CCCcCccH----HHHHHHHHHHhCCcCCccCCCHHHHHHHhccChh
Confidence 9999987 78899995 45678998887 677889999999999988654
No 4
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.92 E-value=1.9e-24 Score=225.17 Aligned_cols=161 Identities=25% Similarity=0.378 Sum_probs=137.1
Q ss_pred cccccEEEEcCCCCcccccccccccc-----cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCC-
Q 004387 6 VQEEHLDVLTMTGQKTGITKPRSEVH-----RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG- 79 (757)
Q Consensus 6 ~~~E~~~vvd~~~~~~G~~~~R~~~h-----~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~G- 79 (757)
+++|+++|||++++++|. ++|..+| ..|.+|++++|+|++ .+|+|||+||+..|..+||+|++|+|||+++|
T Consensus 35 ~~~E~~~lvd~~~~~iG~-~~r~~~h~~~~~~~g~~h~av~v~v~~-~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~ 112 (246)
T 2pny_A 35 RLEEMLIVVDENDKVIGA-DTKRNCHLNENIEKGLLHRAFSVVLFN-TKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNP 112 (246)
T ss_dssp HTTCEEEEECTTCCEEEE-EEHHHHTBHHHHTTTCCEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCBCCSEEECCBSSH
T ss_pred hccceEEEEcCCCCEEEE-EEhHHhccccccCCCcEEEEEEEEEEe-CCCEEEEEEecCCCCCCCCceEeccCceeccCC
Confidence 679999999999999997 7899999 789999999999998 57899999999999999999999988999999
Q ss_pred -----CCH---HHHHHHHHHHHhCCccC---CCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccc
Q 004387 80 -----DSS---LISAQRELQEELGINLP---KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148 (757)
Q Consensus 80 -----Et~---~eAAiREl~EEtGI~v~---~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~E 148 (757)
||+ .+||+||++|||||.+. ..++..++.+.|.... .+.+..+++.++|.+.... ++.++++|
T Consensus 113 ~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~-~~~~~~~e~~~vf~~~~~~-----~~~~~~~E 186 (246)
T 2pny_A 113 AELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKS-DRIWGEHEICYLLLVRKNV-----TLNPDPSE 186 (246)
T ss_dssp HHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEES-SSSBEEEEEEEEEEEECCC-----CCCCCTTT
T ss_pred cccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecC-CCceeeeEEEEEEEEEECC-----CCCCChHH
Confidence 997 99999999999999854 2357788887776533 2334567888999887532 24678899
Q ss_pred cccEEEEcHHHHHHHHhc---CCCCcccC
Q 004387 149 VSAVKYIAYEEYKNLLAK---DDPSFVPY 174 (757)
Q Consensus 149 v~e~~Wvs~~EL~~~l~~---~~~~f~p~ 174 (757)
+.+++|++++++.+++.. ++..|+||
T Consensus 187 v~~~~wv~~eel~~~l~~~~~~~~~ftp~ 215 (246)
T 2pny_A 187 TKSILYLSQEELWELLEREARGEVKVTPW 215 (246)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTSSCBCHH
T ss_pred eeEEEEEeHHHHHHHHHhccCCCceECHh
Confidence 999999999999998877 56689999
No 5
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.92 E-value=3.3e-24 Score=221.91 Aligned_cols=162 Identities=25% Similarity=0.411 Sum_probs=137.0
Q ss_pred ccccccEEEEcCCCCcccccccccccc-----cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCC
Q 004387 5 VVQEEHLDVLTMTGQKTGITKPRSEVH-----RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG 79 (757)
Q Consensus 5 ~~~~E~~~vvd~~~~~~G~~~~R~~~h-----~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~G 79 (757)
.+++|+++|||++++++|. .+|..+| ..|.+|++++|+|++ .+|+|||+||+..+..+||+|++|+|||+++|
T Consensus 23 ~~~~E~~~lvd~~~~~~G~-~~r~~~h~~~~~~~g~~h~av~v~v~~-~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~G 100 (235)
T 2dho_A 23 QLLAEMCILIDENDNKIGA-ETKKNCHLNENIEKGLLHRAFSVFLFN-TENKLLLQQRSDAKITFPGCFTNTCCSHPLSN 100 (235)
T ss_dssp CSSCCEEEEECTTCCEEEE-EEHHHHTBHHHHTTTCCEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCEESSEEECCBSS
T ss_pred hhcCcEEEEEcCCCCEEEE-EEhHHhccccccCCCceEEEEEEEEEc-CCCEEEEEEecCcCCCCCCcEEeccCceecCC
Confidence 3679999999999999997 7899999 789999999999998 57899999999999999999999988999999
Q ss_pred ------CC---HHHHHHHHHHHHhCCccC---CCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCcc
Q 004387 80 ------DS---SLISAQRELQEELGINLP---KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQT 147 (757)
Q Consensus 80 ------Et---~~eAAiREl~EEtGI~v~---~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~ 147 (757)
|| +.+||+||++||||+.+. ..++..++.+.|..... +.+..++++++|.+.... .+.++++
T Consensus 101 e~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~-~~~~~~e~~~vf~~~~~~-----~~~~~~~ 174 (235)
T 2dho_A 101 PAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSD-GIWGEHEIDYILLVRMNV-----TLNPDPN 174 (235)
T ss_dssp HHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECS-SSBEEEEEEEEEEEECCC-----CCCCCTT
T ss_pred CcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCC-CccceeEEEEEEEEEECC-----CCcCChH
Confidence 88 499999999999999854 23578888887765432 334567888999887532 2467889
Q ss_pred ccccEEEEcHHHHHHHHhc---CCCCcccC
Q 004387 148 EVSAVKYIAYEEYKNLLAK---DDPSFVPY 174 (757)
Q Consensus 148 Ev~e~~Wvs~~EL~~~l~~---~~~~f~p~ 174 (757)
|+.+++|++++++.+++.. ++..|+||
T Consensus 175 Ev~~~~wv~~~el~~~l~~~~~~~~~ftp~ 204 (235)
T 2dho_A 175 EIKSYCYVSKEELKELLKKAASGEIKITPW 204 (235)
T ss_dssp TEEEEEEECHHHHHHHHHHHHTTSSCBCHH
T ss_pred HEEEEEEEcHHHHHHHHhhccCCCcEECHh
Confidence 9999999999999998877 55689999
No 6
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.90 E-value=1.8e-23 Score=208.46 Aligned_cols=159 Identities=26% Similarity=0.444 Sum_probs=102.8
Q ss_pred cccccEEEEcCCCCcccccccccccc-cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHH
Q 004387 6 VQEEHLDVLTMTGQKTGITKPRSEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84 (757)
Q Consensus 6 ~~~E~~~vvd~~~~~~G~~~~R~~~h-~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~e 84 (757)
|++|+++|||++++++|. ++|..+| ..|.+|++++++|++ .+++|||++|+..+..+||.|++||||++++|||+.+
T Consensus 1 ~~~E~~~v~d~~~~~~g~-~~r~~~~~~~~~~~~~v~~~i~~-~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~ 78 (190)
T 1hzt_A 1 MQTEHVILLNAQGVPTGT-LEKYAAHTADTRLHLAFSSWLFN-AKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNED 78 (190)
T ss_dssp -------------------------------CEECEEEEEEC-TTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHH
T ss_pred CCceEEEEECCCCCEeee-EEHhhhcccCCceEEEEEEEEEc-CCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHH
Confidence 678999999999999996 7899999 999999999999998 5789999999887788899999944999999999999
Q ss_pred HHHHHHHHHhCCccCCCce-EEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 85 SAQRELQEELGINLPKDAF-EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 85 AAiREl~EEtGI~v~~~~L-~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
||+||++||||+.+.. + ..++.+.+....+++ ...+.+.++|.+.... .+.++++|+.+++|++++++.++
T Consensus 79 aa~REl~EEtGl~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~-----~~~~~~~E~~~~~W~~~~el~~~ 150 (190)
T 1hzt_A 79 AVIRRCRYELGVEITP--PESIYPDFRYRATDPSG-IVENEVCPVFAARTTS-----ALQINDDEVMDYQWCDLADVLHG 150 (190)
T ss_dssp HHHHHHHHHHCCCBSC--CEEEETTCEEEEECTTS-CEEEEECCEEEEEBCS-----CCCCCTTTEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHCCCchh--hheeeeeEEEEeeCCCC-CcceEEEEEEEEecCC-----CCcCCccceeeEEEecHHHHHHH
Confidence 9999999999998754 4 455544443322222 1235567888777532 23556789999999999999999
Q ss_pred HhcCCCCcccC
Q 004387 164 LAKDDPSFVPY 174 (757)
Q Consensus 164 l~~~~~~f~p~ 174 (757)
+..++..|.||
T Consensus 151 ~~~~~~~~~p~ 161 (190)
T 1hzt_A 151 IDATPWAFSPW 161 (190)
T ss_dssp HHHCGGGBCHH
T ss_pred HHcChhhcCch
Confidence 88777778888
No 7
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.86 E-value=5.3e-21 Score=188.34 Aligned_cols=150 Identities=26% Similarity=0.355 Sum_probs=118.4
Q ss_pred CCc-cccccccEEEEcCCCCcccccccccccccCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCC
Q 004387 1 MAE-SVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG 79 (757)
Q Consensus 1 ~~~-~~~~~E~~~vvd~~~~~~G~~~~R~~~h~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~G 79 (757)
|++ +.+++|+|++||.+++++|. ++|..++..+.+|+++++++++ .+|+|||++|+..+..+||+|++||||++++|
T Consensus 1 ~~~~~~~~~E~~~i~d~~~~~~g~-~~r~~~~~~~~~~~~~~v~i~~-~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~g 78 (180)
T 2fkb_A 1 MEQRRLASTEWVDIVNEENEVIAQ-ASREQMRAQCLRHRATYIVVHD-GMGKILVQRRTETKDFLPGMLDATAGGVVQAD 78 (180)
T ss_dssp -------CCCEEEEECTTSCEEEE-EEHHHHHHHTCCEEEEEEEEEC-SSSCEEEEEECSSCSSSTTCEESSBCCBCBTT
T ss_pred CCccccCCCeeEEEECCCCCEeeE-EEHHHhhccCceeeEEEEEEEC-CCCEEEEEECCCCCccCCCcEEeecCCCCCCC
Confidence 554 34689999999999999997 7899999999999999999998 57899999998877778999999559999999
Q ss_pred CCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHH
Q 004387 80 DSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159 (757)
Q Consensus 80 Et~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~E 159 (757)
||+.+||+||++||||+.+. .+..++.+.+.. . ..+...++|.+... . .+.++++|+.+++|+++++
T Consensus 79 E~~~~aa~REl~EEtGl~~~--~~~~l~~~~~~~--~----~~~~~~~~f~~~~~-~----~~~~~~~E~~~~~W~~~~e 145 (180)
T 2fkb_A 79 EQLLESARREAEEELGIAGV--PFAEHGQFYFED--K----NCRVWGALFSCVSH-G----PFALQEDEVSEVCWLTPEE 145 (180)
T ss_dssp CCHHHHHHHHHHHHHCCBSC--CCEEEEEEEEEE--T----TEEEEEEEEEEECC-C----CCCCCTTTEEEEEEECHHH
T ss_pred CCHHHHHHHHHHHHHCCCcc--ceEEEEEEEecC--C----CceEEEEEEEEecC-C----CcCCChhHhheEEEecHHH
Confidence 99999999999999999864 355666655432 1 13456677877632 1 2356678999999999999
Q ss_pred HHHHHh
Q 004387 160 YKNLLA 165 (757)
Q Consensus 160 L~~~l~ 165 (757)
+.+++.
T Consensus 146 l~~~~~ 151 (180)
T 2fkb_A 146 ITARCD 151 (180)
T ss_dssp HHTTGG
T ss_pred HHHHHH
Confidence 987653
No 8
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.84 E-value=2.5e-20 Score=182.02 Aligned_cols=145 Identities=22% Similarity=0.326 Sum_probs=118.4
Q ss_pred cccccccEEEEcCCCCccccccccccc---ccCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCee-eccccccCCC
Q 004387 4 SVVQEEHLDVLTMTGQKTGITKPRSEV---HRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD-ISSAGHISAG 79 (757)
Q Consensus 4 ~~~~~E~~~vvd~~~~~~G~~~~R~~~---h~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~-lPvGG~ve~G 79 (757)
+..++|+|++||.+++++|. ++|..+ |.. |+++++++++ .+|++||+||+..+..++|.|+ +| ||++++|
T Consensus 2 ~~~~~E~~~~~d~~~~~~g~-~~r~~~~l~~~~---~~~v~v~i~~-~~~~vLl~~r~~~~~~~~g~w~~~P-gG~ve~g 75 (171)
T 1q27_A 2 GGVSDERLDLVNERDEVVGQ-ILRTDPALRWER---VRVVNAFLRN-SQGQLWIPRRSPSKSLFPNALDVSV-GGAVQSG 75 (171)
T ss_dssp CCCCSSEEEEESSSSCEEEE-EESSCTTSCTTS---CEEEEEEEEE-TTTEEEECCSCCSSSCCCCSCCCSE-EEECSSS
T ss_pred CcccceeeeeecCCCCEece-EEhhhhcccccc---ceEEEEEEEC-CCCeEEEEEecCCCCCCCCcccccc-CccccCC
Confidence 34579999999999999997 889988 766 9999999998 5789999999887778899999 87 9999999
Q ss_pred CCHHHHHHHHHHHHhCCccCCCceEEEEEEE-eeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHH
Q 004387 80 DSSLISAQRELQEELGINLPKDAFEFVFTFL-QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYE 158 (757)
Q Consensus 80 Et~~eAAiREl~EEtGI~v~~~~L~~v~~~~-~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~ 158 (757)
||+.+||+||++||||+.+....+..++.+. +.. +. +.+.++|.+.. .. .+.++++|+.+++|++++
T Consensus 76 Es~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~--~~-----~~~~~~f~~~~-~~----~~~~~~~E~~~~~W~~~~ 143 (171)
T 1q27_A 76 ETYEEAFRREAREELNVEIDALSWRPLASFSPFQT--TL-----SSFMCVYELRS-DA----TPIFNPNDISGGEWLTPE 143 (171)
T ss_dssp SCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSS--CC-----SSEEEEEEEEC-CC----CCCSCTTTCSCCEEECHH
T ss_pred CCHHHHHHHHHHHHHCCcccccceEEEEEEeccCC--CC-----ccEEEEEEEEE-CC----ccccCchhhheEEEecHH
Confidence 9999999999999999998765677777665 322 11 12667887775 22 235667899999999999
Q ss_pred HHHHHHhc
Q 004387 159 EYKNLLAK 166 (757)
Q Consensus 159 EL~~~l~~ 166 (757)
++.+++..
T Consensus 144 el~~~~~~ 151 (171)
T 1q27_A 144 HLLARIAA 151 (171)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99976553
No 9
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.68 E-value=2.9e-16 Score=148.06 Aligned_cols=110 Identities=21% Similarity=0.288 Sum_probs=81.1
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
|.+++++|++ +|+|||+||. .|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.....
T Consensus 4 ~~aag~vv~~--~~~vLL~~r~------~g~W~~P-gG~ve~gEt~~~aa~RE~~EEtGl~~~~--~~~l~~~~~~~~~~ 72 (134)
T 3i7u_A 4 EFSAGGVLFK--DGEVLLIKTP------SNVWSFP-KGNIEPGEKPEETAVREVWEETGVKGEI--LDYIGEIHYWYTLK 72 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEECT------TSCEECC-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEET
T ss_pred EEEEEEEEEE--CCEEEEEEeC------CCcEECC-eeEecCCCCHHHHHHHHHHHhcCceEEE--eeeeeeeeEEecCC
Confidence 5688888887 6899999874 3789998 9999999999999999999999998653 44555444333222
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
+. ..+..+++|.+...++. +.++ +|+.+++|++++++.+++
T Consensus 73 ~~--~~~~~~~~f~~~~~~~~----~~~~-~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 73 GE--RIFKTVKYYLMKYKEGE----PRPS-WEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp TE--EEEEEEEEEEEEEEEEC----CCCC-TTSSEEEEEEHHHHHHHB
T ss_pred Cc--eEEEEEEEEEEEEcCCc----CcCC-hhheEEEEEEHHHHhhhc
Confidence 21 12334566777665432 2333 689999999999998764
No 10
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.67 E-value=1.6e-15 Score=145.44 Aligned_cols=127 Identities=20% Similarity=0.363 Sum_probs=96.3
Q ss_pred ccccCCceeEEEEEEEEecCCCEEEEEEeCCC--CCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEE
Q 004387 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADF--KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV 106 (757)
Q Consensus 29 ~~h~~g~~hrav~viV~n~~~g~ILL~rRs~~--k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v 106 (757)
..+.....|+++++++++ .++++||++|... +..++|.|++| ||++++|||+.+||+||+.||||+.+. .+..+
T Consensus 5 ~~~~~~~~~~~~~~vi~~-~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~--~~~~l 80 (159)
T 1sjy_A 5 ERTHVPVELRAAGVVLLN-ERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGENPQDAAVREACEETGLRVR--PVKFL 80 (159)
T ss_dssp CCCCCCCCEEEEEEEEBC-TTCCEEEEEESCC----CCCCCEECS-EEECCTTSCHHHHHHHHHHHHHSCCEE--EEEEE
T ss_pred ccCCCCeEEEeEEEEEEe-CCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHHCccce--eeEEE
Confidence 345567789999999998 4789999999852 34578999998 999999999999999999999999864 34555
Q ss_pred EEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccC-CccccccEEEEcHHHHHHHHhcC
Q 004387 107 FTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLLAKD 167 (757)
Q Consensus 107 ~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~-~~~Ev~e~~Wvs~~EL~~~l~~~ 167 (757)
+.+.+. .+.+ .+...++|.+....+. .+.+ +++|+.++.|++++++.+++..+
T Consensus 81 ~~~~~~--~~~~---~~~~~~~f~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 81 GAYLGR--FPDG---VLILRHVWLAEPEPGQ---TLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp EEEEEE--CTTS---CEEEEEEEEEEECSSC---CCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred EEEecc--cCCC---ceEEEEEEEEEccCCC---ccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 555432 2222 3567788888875432 1344 66899999999999999987753
No 11
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.66 E-value=2.6e-15 Score=143.55 Aligned_cols=113 Identities=22% Similarity=0.261 Sum_probs=87.0
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeee
Q 004387 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 114 (757)
Q Consensus 35 ~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~ 114 (757)
..|.+|.+++++ .+++|||++|...+..++|.|.+| ||++++|||+.+||+||++||||+.+.... .++.+.+..
T Consensus 6 ~~~~~v~~vi~~-~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~~~~aa~REl~EE~Gl~~~~~~--~~~~~~~~~- 80 (153)
T 3grn_A 6 PYIISVYALIRN-EKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDESLKEGVAREVWEETGITMVPGD--IAGQVNFEL- 80 (153)
T ss_dssp CEEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCCCCCCCS--EEEEEEEEC-
T ss_pred ceEEEEEEEEEc-CCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCCHHHHHHhhhhhhhCcEeecce--EEEEEEEec-
Confidence 467889999988 478999999988767889999998 999999999999999999999999976544 344443321
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 115 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 115 ~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
+. .+...++|.+....+. +.+ .+|+.+++|++++++.+
T Consensus 81 -~~----~~~~~~~~~~~~~~~~----~~~-~~e~~~~~W~~~~el~~ 118 (153)
T 3grn_A 81 -TE----KKVIAIVFDGGYVVAD----VKL-SYEHIEYSWVSLEKILG 118 (153)
T ss_dssp -SS----CEEEEEEEEEEECCCC----CCC-CTTEEEEEEECHHHHTT
T ss_pred -CC----ceEEEEEEEEEecCCc----Eec-CCCcceEEEEEHHHhhh
Confidence 21 2456677777664432 123 37899999999999965
No 12
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.62 E-value=2e-16 Score=151.83 Aligned_cols=124 Identities=19% Similarity=0.211 Sum_probs=84.5
Q ss_pred ccccccCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEE
Q 004387 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV 106 (757)
Q Consensus 27 R~~~h~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v 106 (757)
|..++.....|.++.+++++ .+++|||++|+ +|.|.+| ||++++|||+.+||+||++||||+.+.. +..+
T Consensus 11 r~~~~~~~~~~~~v~~ii~~-~~~~vLL~~r~------~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~ 80 (153)
T 3eds_A 11 REQLGHELIFXPSVAAVIKN-EQGEILFQYPG------GEYWSLP-AGAIELGETPEEAVVREVWEETGLKVQV--KKQK 80 (153)
T ss_dssp HHHHTTSCEEEEEEEEEEBC-TTCCEEEECC---------CBBCS-EEECCTTSCHHHHHHHHHHHHHCEEEEE--EEEE
T ss_pred HHhcCCCcEEeeeEEEEEEc-CCCeEEEEEcC------CCcEECC-ccccCCCCCHHHHHHHHHHHHHCcccee--eeEE
Confidence 55666778899999999988 57899999886 6999998 9999999999999999999999998643 3444
Q ss_pred EEEEe---eeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHh
Q 004387 107 FTFLQ---QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165 (757)
Q Consensus 107 ~~~~~---~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~ 165 (757)
+.+.. ....+.+. ..+.+..+|.+....+. +.++++|+.+++|++++++.++..
T Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~----~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 81 GVFGGKEYRYTYSNGD-EVEYIVVVFECEVTSGE----LRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp EEECSGGGEEECTTSC-EEEEEEEEEEEEEEEEC----CC-------CEEEECGGGCCCBSS
T ss_pred EEecccceeeecCCCC-eEEEEEEEEEEEecCCc----cccCCCcEEEEEEECHHHCchhcc
Confidence 44311 11112221 22446778888765432 355668999999999999976544
No 13
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.62 E-value=4.5e-15 Score=143.73 Aligned_cols=125 Identities=20% Similarity=0.235 Sum_probs=79.1
Q ss_pred cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEE-
Q 004387 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL- 110 (757)
Q Consensus 32 ~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~- 110 (757)
..+..|+++.+++++ .+++|||++|+..+..++|.|.+| ||++++|||+.+||+||++||||+.+....+..+....
T Consensus 22 ~~~~~~~~~~~~ii~-~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 99 (165)
T 3oga_A 22 SNAMRQRTIVCPLIQ-NDGCYLLCKMADNRGVFPGQWALS-GGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDD 99 (165)
T ss_dssp --CCEEEEEEEEEEE-ETTEEEEEEECC------CCEECC-CEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEE
T ss_pred CCCcceEEEEEEEEe-CCCEEEEEEecCCCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecc
Confidence 456788888888887 478999999998777889999998 99999999999999999999999997543333221100
Q ss_pred -eeeecCCCcccc-eEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 111 -QQNVINDGKFIN-NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 111 -~~~~~~~g~~~~-~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
.....+.+.... ..+..+|.+...... +.. ++|+.+++|++++++.++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 100 IRIKTYADGRQEEIYMIYLIFDCVSANRD----ICI-NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEEC--CCEEEEEEEEEEEEEEESCCC----CCC-CTTEEEEEEECGGGGGGS
T ss_pred eeeEecCCCCceeEEEEEEEEEeeccCCC----ccC-CchheeeEEccHHHHhhC
Confidence 011122221111 122344444443221 122 378999999999999653
No 14
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.61 E-value=4.8e-15 Score=139.63 Aligned_cols=114 Identities=17% Similarity=0.284 Sum_probs=86.7
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeee
Q 004387 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 114 (757)
Q Consensus 35 ~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~ 114 (757)
..++++.+++++ .+++|||+||... ..++|.|.+| ||+++.|||+.+||+||+.||||+.+....+..++.+.+..
T Consensus 6 ~~~~~~~~vi~~-~~~~vLl~~r~~~-~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~- 81 (144)
T 3r03_A 6 PILLVTAAALID-PDGRVLLAQRPPG-KSLAGLWEFP-GGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSY- 81 (144)
T ss_dssp CEEEEEEEEEBC-TTSCEEEEECCTT-SSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC-
T ss_pred ceeEEEEEEEEc-CCCEEEEEEeCCC-CCCCCcEECC-CcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccC-
Confidence 457778888887 5789999999865 4589999998 99999999999999999999999997665555555444322
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 115 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 115 ~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
+. .+...++|.+..... .+.+.|+.+++|++++++.++
T Consensus 82 -~~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 82 -DT----FHLLMPLYACRSWRG------RATAREGQTLAWVRAERLREY 119 (144)
T ss_dssp -SS----SEEEEEEEEECCCBS------CCCCCSSCEEEEECGGGGGGS
T ss_pred -CC----eEEEEEEEEEEecCC------ccCCCCcceEEEEeHHHhccC
Confidence 11 245667777765332 334578899999999999663
No 15
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.61 E-value=6e-15 Score=141.73 Aligned_cols=115 Identities=23% Similarity=0.275 Sum_probs=78.0
Q ss_pred EEEEEEEEe--------cCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEE
Q 004387 38 RTVNAWIFA--------ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF 109 (757)
Q Consensus 38 rav~viV~n--------~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~ 109 (757)
|+++++|+. .++.++||+||+.. +|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lP-gG~ve~gEt~~~aa~REl~EEtGl~~~~--~~~~~~~ 76 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPP-KGHVEPGEDDLETALRETQEEAGIEAGQ--LTIIEGF 76 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECS-EEECCSSCCHHHHHHHHHHHHHCCCGGG--EEEEEEE
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECC-eeeccCCCCHHHHHHHHHHHHHCCcccc--ceeeeeE
Confidence 467777773 13458999999764 5899998 9999999999999999999999998654 3333333
Q ss_pred EeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 110 LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 110 ~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
......... .......+|++....... . ...++|+.+++|++++|+.+++
T Consensus 77 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~-~~~~~E~~~~~W~~~~ea~~~~ 126 (155)
T 3u53_A 77 KRELNYVAR--NKPKTVIYWLAEVKDYDV--E-IRLSHEHQAYRWLGLEEACQLA 126 (155)
T ss_dssp EEEEEEEET--TEEEEEEEEEEEESCTTC--C-CCCCTTEEEEEEECHHHHHHHH
T ss_pred eeeeecCCC--cceeEEEEEEEEEeccCC--c-cCCCcceeEEEEeEHHHHHHHc
Confidence 322211111 123344556565543221 1 2334699999999999998765
No 16
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.60 E-value=8.3e-15 Score=140.51 Aligned_cols=119 Identities=17% Similarity=0.234 Sum_probs=87.6
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
..++++++++ .+++|||++|+.. .++|.|.+| ||++++|||+.+||+||++||||+.+....+..++.+.+.....
T Consensus 18 ~~~v~~vi~~-~~~~vLl~~r~~~--~~~g~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 93 (160)
T 1rya_A 18 LVSLDFIVEN-SRGEFLLGKRTNR--PAQGYWFVP-GGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDN 93 (160)
T ss_dssp EEEEEEEEEC-TTSCEEEEEECSS--SSTTSEECC-EEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSB
T ss_pred EEEEEEEEEc-CCCEEEEEeccCC--CCCCEEECC-ccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEccc
Confidence 4678888887 5789999999863 368999998 99999999999999999999999986434456666554432111
Q ss_pred -CC-cccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 117 -DG-KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 117 -~g-~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
.+ ....+.+.++|.+....+ .+..+++|+.+++|++++++.+.
T Consensus 94 ~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 94 FSGTDFTTHYVVLGFRFRVSEE----ELLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp TTBSSSCEEEEEEEEEEECCGG----GCCCCSSSEEEEEEECHHHHHHC
T ss_pred ccCCCcCcEEEEEEEEEEcCcc----ccccCCCccceEEEecHHHHhhc
Confidence 11 112256777887775432 23556679999999999999763
No 17
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.59 E-value=2.1e-14 Score=134.23 Aligned_cols=114 Identities=20% Similarity=0.258 Sum_probs=82.3
Q ss_pred eeEEEEEEEEecC--CCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCce--EEEEEEEe
Q 004387 36 YHRTVNAWIFAES--TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF--EFVFTFLQ 111 (757)
Q Consensus 36 ~hrav~viV~n~~--~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L--~~v~~~~~ 111 (757)
.++++++++++.. ++++||+||+. .+|.|.+| ||++++|||+.+||+||++||||+.+....+ ..++.+.+
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 76 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPP-KGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFY 76 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESS----TTCCEESS-EEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCC-ccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEE
Confidence 4578888888732 35899999873 26899998 9999999999999999999999997543222 12223333
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 112 ~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
.. + + .+...++|.+...... ...+++|+.+++|++++++.+++
T Consensus 77 ~~--~-~---~~~~~~~f~~~~~~~~----~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 77 EA--K-G---KPKSVKYWLAKLNNPD----DVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp EE--T-T---EEEEEEEEEEEECSCC----CCCCCTTEEEEEEECHHHHHHHH
T ss_pred Ee--C-C---CceEEEEEEEEecCCc----ccCCCchhcEeEeccHHHHHHhh
Confidence 22 1 1 3456778888775431 14456799999999999998864
No 18
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.58 E-value=1.7e-14 Score=137.51 Aligned_cols=108 Identities=21% Similarity=0.324 Sum_probs=81.1
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
|.++.+++.+ ++++||+||.. ..+|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+.. +
T Consensus 5 ~~~v~~ii~~--~~~vLl~~r~~---~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~~~--~ 74 (153)
T 3shd_A 5 HVTVACVVHA--EGKFLVVEETI---NGKALWNQP-AGHLEADETLVEAAARELWEETGISAQP--QHFIRMHQWIA--P 74 (153)
T ss_dssp EEEEEEEEEE--TTEEEEEEEEE---TTEEEEECS-EEECCTTCCHHHHHHHHHHHHHCCCCCC--CEEEEEEEECC--T
T ss_pred ceEEEEEEEe--CCEEEEEEecC---CCCCCEECC-eEEeCCCCCHHHHHHHHHHHHHCccccc--CcEEEEEEEec--C
Confidence 5566666665 78999999872 347899998 9999999999999999999999999765 34444443332 1
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL 160 (757)
++ .+...++|.+....... ..++++|+.+++|++++++
T Consensus 75 ~~---~~~~~~~f~~~~~~~~~---~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 75 DK---TPFLRFLFAIELEQICP---TQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp TS---CCEEEEEEEEECSSCCC---CCCCSTTCCEEEEECHHHH
T ss_pred CC---ceEEEEEEEEEccccCc---CCCCcccceeeEEecHHHh
Confidence 21 34566888887654321 3566789999999999999
No 19
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.58 E-value=6.8e-15 Score=138.53 Aligned_cols=109 Identities=21% Similarity=0.200 Sum_probs=77.0
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCC-CCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDS-WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~-~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
.++.+++++ +|+|||+||...+.. ++|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.. +
T Consensus 7 ~~v~~vi~~--~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EE~Gl~~~~--~~~~~~~~~~~--~ 79 (140)
T 3gwy_A 7 EVVAAVIRL--GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGESLQEALQREIMEEMDYVIEV--GEKLLTVHHTY--P 79 (140)
T ss_dssp EEEEEEEEE--TTEEEEEEC---------CCEECS-EEECCTTCCHHHHHHHHHHHHHCCCEEE--EEEEEEEECCC--S
T ss_pred EEEEEEEEe--CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCCHHHHHHHHHHHhhCcEEEe--ceEEEEEEEEe--C
Confidence 345666666 789999999876432 78999998 9999999999999999999999998643 44555544322 2
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
. .+...++|.+..... .++++|+.+++|++++++.++
T Consensus 80 ~----~~~~~~~f~~~~~~~------~~~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 80 D----FEITMHAFLCHPVGQ------RYVLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp S----CCEEEEEEEEEECCS------CCCCCSSCEEEEECHHHHTTS
T ss_pred C----ceEEEEEEEEEecCC------cccccccceeEeccHHHHhhC
Confidence 1 345678888877543 234468999999999999653
No 20
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.58 E-value=1.6e-14 Score=134.10 Aligned_cols=110 Identities=22% Similarity=0.316 Sum_probs=81.3
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
..++++++++ +|+|||+||.. |.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+....+
T Consensus 4 ~~~~~~vi~~--~~~vLl~~r~~------~~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~~~~ 72 (134)
T 2pbt_A 4 EFSAGGVLFK--DGEVLLIKTPS------NVWSFP-KGNIEPGEKPEETAVREVWEETGVKGEI--LDYIGEIHYWYTLK 72 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEECTT------SCEECC-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEET
T ss_pred ceEEEEEEEE--CCEEEEEEeCC------CcEECC-ccccCCCCCHHHHHHHHHHHHHCCccEE--eeeeeEEEEEeeCC
Confidence 3567788887 57999999864 899998 9999999999999999999999998643 44555544333222
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
+ ...+...++|.+......+ .+++ |+.+++|++++++.+..
T Consensus 73 ~--~~~~~~~~~~~~~~~~~~~----~~~~-e~~~~~W~~~~el~~~~ 113 (134)
T 2pbt_A 73 G--ERIFKTVKYYLMKYKEGEP----RPSW-EVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp T--EEEEEEEEEEEEEEEEECC----CCCT-TSSEEEEEEHHHHHHHC
T ss_pred C--cEEEEEEEEEEEEecCCCc----CCCc-ceeEEEEEcHHHHHhhh
Confidence 1 1234567788887654322 3343 99999999999998753
No 21
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.58 E-value=1.6e-14 Score=138.87 Aligned_cols=115 Identities=20% Similarity=0.337 Sum_probs=86.3
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee
Q 004387 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (757)
Q Consensus 34 g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~ 113 (757)
...++++.+++++ .+++|||+||... ..++|.|.+| ||++++|||+.+||+||+.||||+.+....+..++.+.+..
T Consensus 26 ~~~~~~~~~~i~~-~~~~vLL~~r~~~-~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 102 (158)
T 3hhj_A 26 SSLLIVVACALLD-QDNRVLLTQRPEG-KSLAGLWEFP-GGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGY 102 (158)
T ss_dssp -CEEEEEEEEEBC-TTSEEEEEECCCT-TSCCCCCBCC-EEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC
T ss_pred CceEEEEEEEEEe-CCCEEEEEEeCCC-CCCCCEEECC-ceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeecc
Confidence 3467778888887 5789999999865 4589999998 99999999999999999999999997665555555544322
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 114 ~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
+. .+...++|.+..... .+...|+.+++|++++++.++
T Consensus 103 --~~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 103 --ET----FHLLMPLYFCSHYKG------VAQGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp --SS----CEEEEEEEEESCCBS------CCCCTTSCEEEEEEGGGGGGS
T ss_pred --CC----cEEEEEEEEEEECCC------ccCCccccceEEEcHHHHhhC
Confidence 11 244566776654322 344578899999999999653
No 22
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.57 E-value=2.1e-14 Score=135.67 Aligned_cols=115 Identities=19% Similarity=0.316 Sum_probs=82.7
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEE---ee-
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL---QQ- 112 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~---~~- 112 (757)
+.++++++++..+|++||++|+.. ||.|++| ||++++|||+.+||+||++||||+.+....+..++... +.
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 83 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSV-TGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEI 83 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESE-EEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEEC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECC-ccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeee
Confidence 467888899843489999998764 7999998 99999999999999999999999987543233333221 10
Q ss_pred -----eecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 113 -----NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 113 -----~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
...+++ ..+...++|.+....+. ....+|+.+++|++++++.++
T Consensus 84 ~~~~~~~~~~~--~~~~~~~~f~~~~~~~~-----~~~~~E~~~~~W~~~~el~~~ 132 (150)
T 2o1c_A 84 FSHLRHRYAPG--VTRNTESWFCLALPHER-----QIVFTEHLAYKWLDAPAAAAL 132 (150)
T ss_dssp CGGGGGGBCTT--CCEEEEEEEEEEESSCC-----CCCCSSSSCEEEEEHHHHHHH
T ss_pred ecccccccCCC--CcceEEEEEEEEcCCCC-----CcChhHhhccEeecHHHHHhh
Confidence 011111 13466788888775432 223378999999999999875
No 23
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.57 E-value=1.4e-14 Score=139.54 Aligned_cols=116 Identities=20% Similarity=0.289 Sum_probs=85.6
Q ss_pred CCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEee
Q 004387 33 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ 112 (757)
Q Consensus 33 ~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~ 112 (757)
....+.+|.++|++ +++|||+||.... ++|.|.+| ||++++|||+.+||+||++||||+.+... ..++.+...
T Consensus 25 ~~~~~~~v~~vi~~--~~~vLL~~r~~~~--~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~ 97 (157)
T 4dyw_A 25 TEQPRVGCGAAIVR--DGRILLIKRKRAP--EAGCWGLP-GGKVDWLEPVERAVCREIEEELGIALERA--TLLCVVDHI 97 (157)
T ss_dssp -CCCEEEEEEEEEE--TTEEEEEEECSSS--STTCEECC-EEECCTTCCHHHHHHHHHHHHHSCEEESC--EEEEEEEEE
T ss_pred CCCceeEEEEEEEE--CCEEEEEEecCCC--CCCEEECC-cccCCCCCCHHHHHHHHHHHHHCcccccC--cEEEEEEee
Confidence 34467888888888 6899999998643 78999998 99999999999999999999999997653 444444332
Q ss_pred eecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 113 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 113 ~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
.. .. ..+.+.++|.+......+ ...+++|+.+++|++++++.+
T Consensus 98 ~~--~~--~~~~~~~~f~~~~~~~~~---~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 98 DA--AN--GEHWVAPVYLAHAFSGEP---RVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp ET--TT--TEEEEEEEEEESEEESCC---CCSCTTTEEEEEEEETTSCCS
T ss_pred cc--CC--CcEEEEEEEEEEEcCCCc---ccCCCCcEeEEEEECHHHccc
Confidence 21 11 134566778776644322 133557899999999999954
No 24
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.56 E-value=5.1e-14 Score=140.94 Aligned_cols=124 Identities=21% Similarity=0.298 Sum_probs=80.2
Q ss_pred CCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCc-cCC--CceEEEEEE
Q 004387 33 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGIN-LPK--DAFEFVFTF 109 (757)
Q Consensus 33 ~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~-v~~--~~L~~v~~~ 109 (757)
....|.+++++|++.++++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+. +.. ..+..+..+
T Consensus 41 ~~~~h~~~~~vv~~~~~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~ 114 (197)
T 3fcm_A 41 NTIAHLTSSAFAVNKERNKFLMIHHNI-----YNSWAWT-GGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVL 114 (197)
T ss_dssp CSSEEEEEEEEEECTTSCEEEEEEETT-----TTEEECE-EEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEE
T ss_pred CCCccEEEEEEEEECCCCEEEEEEecC-----CCCEECC-ccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEe
Confidence 456899999999995334999998863 5899998 9999999999999999999999997 432 112222222
Q ss_pred EeeeecCCCccc--ceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHh
Q 004387 110 LQQNVINDGKFI--NNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165 (757)
Q Consensus 110 ~~~~~~~~g~~~--~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~ 165 (757)
........+... ...+..+|.+....+. .+.++++|+.+++|++++++.+++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~E~~~~~W~~~~el~~~~~ 169 (197)
T 3fcm_A 115 TVNGHIKRGKYVSSHLHLNLTYLIECSEDE---TLMLKEDENSGVMWIPFNEISKYCS 169 (197)
T ss_dssp EECCEEETTEEECCEEEEEEEEEEECCTTS---CCCCCC----CEEEEEGGGHHHHCC
T ss_pred eecCccccCcccCCceeEEEEEEEEeCCCc---ccCCCcccccceEEccHHHHHhhcC
Confidence 221111111100 1113355666544322 2466778999999999999988754
No 25
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.56 E-value=1.4e-14 Score=140.16 Aligned_cols=115 Identities=17% Similarity=0.266 Sum_probs=84.4
Q ss_pred CCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEee
Q 004387 33 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ 112 (757)
Q Consensus 33 ~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~ 112 (757)
....|.++.++|++..+++|||+||.. ..|+|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.
T Consensus 6 ~~~~~~~v~~vi~~~~~~~vLL~~r~~--~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~~ 80 (161)
T 3exq_A 6 TQPVELVTMVMVTDPETQRVLVEDKVN--VPWKAGHSFP-GGHVEVGEPCATAAIREVFEETGLRLSG--VTFCGTCEWF 80 (161)
T ss_dssp CCCEEEEEEEEEBCTTTCCEEEECCCC--CTTTCSBBCC-CCBCCTTSCHHHHHHHHHHHHHCCEESC--CEEEEEEEEE
T ss_pred cCCceEEEEEEEEeCCCCEEEEEEccC--CCCCCCEEcc-ceecCCCCCHHHHHHHHHHHhhCcEecC--CcEEEEEecc
Confidence 345678888888883226999999883 4678899998 9999999999999999999999999754 4455555443
Q ss_pred eecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 113 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 113 ~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
.... ..+...++|.+..... .+.+.|..+++|++++++.+
T Consensus 81 ~~~~----~~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~ 120 (161)
T 3exq_A 81 DDDR----QHRKLGLLYRASNFTG------TLKASAEGQLSWLPITALTR 120 (161)
T ss_dssp CSSC----SSEEEEEEEEECCEES------CCCGGGTTTEEEECGGGCCT
T ss_pred cCCC----CeEEEEEEEEEeccCC------ccCCCccceEEEeeHHHhhh
Confidence 2111 1245566776654332 23456888999999999955
No 26
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.56 E-value=7e-15 Score=148.99 Aligned_cols=147 Identities=14% Similarity=0.262 Sum_probs=96.5
Q ss_pred cccccccccccCCceeEEEEEEEEecCCCEEEEEEeCCCCC--CCCCCeee-ccccccCCCCC--H----HHHHHHHHHH
Q 004387 22 GITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKD--SWPGMWDI-SSAGHISAGDS--S----LISAQRELQE 92 (757)
Q Consensus 22 G~~~~R~~~h~~g~~hrav~viV~n~~~g~ILL~rRs~~k~--~~pG~W~l-PvGG~ve~GEt--~----~eAAiREl~E 92 (757)
|..+.|..+...+.++..+..+|+. .+|++||++|...+. .++|.|.+ | ||||++||| + .+||+||++|
T Consensus 52 ~~~~~Rg~~e~d~~~~q~i~~~II~-~~grvLl~~R~~~~~e~~~~g~w~~gP-GGhVE~GEs~~p~EtleeAa~REl~E 129 (211)
T 3e57_A 52 GFFRERDEAEYDETTKQVIPYVVIM-DGDRVLITKRTTKQSEKRLHNLYSLGI-GGHVREGDGATPREAFLKGLEREVNE 129 (211)
T ss_dssp CEEEEHHHHTTCTTEEEEEEEEEEE-ETTEEEEEEC------------CBSSE-ECCCBGGGCSSHHHHHHHHHHHHHHH
T ss_pred CEEEEccccccCCcccceEEEEEEE-ECCEEEEEEECCCCCcccccCCccccc-ceEEeCCCCCCchhhHHHHHHHHHHH
Confidence 3356788888888888777666666 378999999987642 36789999 6 999999999 5 9999999999
Q ss_pred HhCCccCCCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHhcCCCCcc
Q 004387 93 ELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172 (757)
Q Consensus 93 EtGI~v~~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~~~~~f~ 172 (757)
|||+++. .+..++.+.+... +.+ ...+..+|.+..... .+.+.|+.+++|+++++|.++... +.
T Consensus 130 EtGl~v~--~~~~ig~~~~~~~-~~~---~~~l~~~f~~~~~~g------~~~~~E~~~~~W~~~~eL~~~~~~----le 193 (211)
T 3e57_A 130 EVDVSLR--ELEFLGLINSSTT-EVS---RVHLGALFLGRGKFF------SVKEKDLFEWELIKLEELEKFSGV----ME 193 (211)
T ss_dssp HEEEEEE--EEEEEEEEECCSS-HHH---HTEEEEEEEEEEEEE------EESCTTTCEEEEEEHHHHHHHGGG----CC
T ss_pred HhCCeee--ccEEEEEEeccCC-CCC---eEEEEEEEEEEeCCc------eeCCCCeEEEEEEEHHHHHHhHhh----cc
Confidence 9999754 3566665554211 111 123455787775422 445678889999999999886432 33
Q ss_pred cCCCCCchHHHHHHHHHHh
Q 004387 173 PYDVNGGYGQLFNIISQRY 191 (757)
Q Consensus 173 p~~~~~~~~~~f~~l~~~~ 191 (757)
+| ...+++.|.+++
T Consensus 194 ~w-----S~lvl~~l~~~~ 207 (211)
T 3e57_A 194 GW-----SKISAAVLLNLF 207 (211)
T ss_dssp HH-----HHHHHHHHHHHC
T ss_pred ch-----hHHHHHHHHHHH
Confidence 55 335566665543
No 27
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.56 E-value=2e-14 Score=136.39 Aligned_cols=109 Identities=22% Similarity=0.327 Sum_probs=80.1
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
++.+.++|++ .+|+|||++|... ..++|.|.+| ||++++|||+.+||+||+.||||+.+....+ ++.+.+.. +
T Consensus 21 ~~~~~~~i~~-~~~~vLl~~r~~~-~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~--~~~~~~~~--~ 93 (153)
T 3ees_A 21 WIPVVAGFLR-KDGKILVGQRPEN-NSLAGQWEFP-GGKIENGETPEEALARELNEELGIEAEVGEL--KLACTHSY--G 93 (153)
T ss_dssp EEEEEEEEEE-ETTEEEEEECCTT-STTTTCEECS-EEECCTTCCHHHHHHHHHHHHHSCEEECCCE--EEEEEEEE--T
T ss_pred eEEEEEEEEE-ECCEEEEEEeCCC-CCCCCeEECC-ceeeCCCCCHHHHHHHHHHHHHCCccccCce--EEEEEEec--C
Confidence 5555556666 3789999999875 4689999998 9999999999999999999999998765443 33333221 2
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
. .+...++|.+..... .++++|+.+++|++++++.+
T Consensus 94 ~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~ 129 (153)
T 3ees_A 94 D----VGILILFYEILYWKG------EPRAKHHMMLEWIHPEELKH 129 (153)
T ss_dssp T----EEEEEEEEEECEEES------CCCCSSSSEEEEECGGGGGG
T ss_pred C----CeEEEEEEEEEECCC------CcCCCccceEEEecHHHhhh
Confidence 1 233456777765433 24457889999999999965
No 28
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.55 E-value=6.9e-15 Score=140.95 Aligned_cols=116 Identities=19% Similarity=0.211 Sum_probs=84.3
Q ss_pred CCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEee
Q 004387 33 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ 112 (757)
Q Consensus 33 ~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~ 112 (757)
....++++.+++++ .+++|||++|... .++|.|.+| ||+++.|||+.+||+||++||||+.+.. +..++.+..
T Consensus 16 ~~~~~~~v~~~i~~-~~~~vLl~~r~~~--~~~~~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~--~~~~~~~~~- 88 (156)
T 3gg6_A 16 RKNVCYVVLAVFLS-EQDEVLLIQEAKR--ECRGSWYLP-AGRMEPGETIVEALQREVKEEAGLHCEP--ETLLSVEER- 88 (156)
T ss_dssp CTTCEEEEEEECBC-TTSEEEEEECCCT--TSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCEEEEE--EEEEEEEES-
T ss_pred CCceEEEEEEEEEe-CCCEEEEEEecCC--CCCCEEECC-eeeccCCCCHHHHHHHHHHHhhCceeEe--eeEEEEEcC-
Confidence 34456677777777 5789999999754 378999998 9999999999999999999999998643 344444431
Q ss_pred eecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 113 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 113 ~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
. .+.+.++|.+........ ....+++|+.+++|++++++.+.+
T Consensus 89 ---~-----~~~~~~~f~~~~~~~~~~-~~~~~~~E~~~~~W~~~~el~~~~ 131 (156)
T 3gg6_A 89 ---G-----PSWVRFVFLARPTGGILK-TSKEADAESLQAAWYPRTSLPTPL 131 (156)
T ss_dssp ---S-----TTEEEEEEEEEEEEECCC-CGGGCSSSCSEEEEEETTSCCSSB
T ss_pred ---C-----CCEEEEEEEEEeeCCeec-cCCCCCcceeeeEEEcHHHCcccc
Confidence 1 123567788876443221 112355799999999999996543
No 29
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.54 E-value=4.9e-14 Score=134.05 Aligned_cols=113 Identities=17% Similarity=0.129 Sum_probs=81.6
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
+.++.+++.+ +++|||++|.... . +|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+.. +
T Consensus 8 ~~~v~~ii~~--~~~vLl~~r~~~~-~-~~~w~lP-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~--~ 78 (153)
T 2b0v_A 8 NVTVAAVIEQ--DDKYLLVEEIPRG-T-AIKLNQP-AGHLEPGESIIQACSREVLEETGHSFLP--EVLTGIYHWTC--A 78 (153)
T ss_dssp EEEEEEECEE--TTEEEEEEECSSS-S-CCEEECS-EEECCTTSCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEE--T
T ss_pred CEEEEEEEee--CCEEEEEEEcCCC-C-CCeEECC-CcCcCCCCCHHHHHHHHHHHhhCcEecc--ceEEEEEEEeC--C
Confidence 3445555554 7899999997653 3 7999998 9999999999999999999999998753 44455444332 2
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
+. ..+.+.++|.+....... ....++|+.+++|++++++.++
T Consensus 79 ~~--~~~~~~~~f~~~~~~~~~---~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 79 SN--GTTYLRFTFSGQVVSFDP---DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp TT--TEEEEEEEEEEEEEEECT---TSCCCTTEEEEEEEEHHHHHHT
T ss_pred CC--CcEEEEEEEEEEeCCCCC---CCCCCCCeeeEEEecHHHHhhh
Confidence 11 124456778877644321 1345678999999999999875
No 30
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.54 E-value=1.5e-14 Score=139.20 Aligned_cols=114 Identities=21% Similarity=0.207 Sum_probs=80.9
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEE--------
Q 004387 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV-------- 106 (757)
Q Consensus 35 ~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v-------- 106 (757)
..|.+++++|++ +++|||+||.. +|.|.+| ||++++|||+.+||+||++||||+.+....+..+
T Consensus 4 ~~~~~v~~vi~~--~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 75 (159)
T 3f6a_A 4 NRHFTVSVFIVC--KDKVLLHLHKK-----AKKMLPL-GGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDL 75 (159)
T ss_dssp CSCEEEEEEEEE--TTEEEEEECSS-----SCCEECE-EEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
T ss_pred cceEEEEEEEEE--CCEEEEEEcCC-----CCeEECC-ccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccc
Confidence 358899999998 68999999864 5899998 9999999999999999999999998654222210
Q ss_pred ---EEEEe-----eeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 107 ---FTFLQ-----QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 107 ---~~~~~-----~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
..+.. ...... ....+..+|.+....+. +.++++|+.+++|++++++.++
T Consensus 76 ~~~~~~~~p~~~~~~~~~~---~~~~~~~~f~~~~~~~~----~~~~~~E~~~~~W~~~~el~~~ 133 (159)
T 3f6a_A 76 SGEKLLINPIHTILGDVSP---NHSHIDFVYYATTTSFE----TSPEIGESKILKWYSKEDLKNA 133 (159)
T ss_dssp TTCEEECCCSEEEEECSSS---SSCEEEEEEEEECSCSC----CCCCTTSCCCEEEECSSSSTTC
T ss_pred cccccccCccccccccCCC---CceEEEEEEEEEeCCCC----cCCCCCcccceEEeeHHHHhhC
Confidence 00000 000011 12345677877764432 3556789999999999999653
No 31
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.53 E-value=3.8e-14 Score=132.62 Aligned_cols=109 Identities=26% Similarity=0.344 Sum_probs=79.0
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
|+.+.++|++ .+|++||++|+.. ..++|.|++| ||++++|||+.+||+||++||||+.+.. +..++.+.+.. +
T Consensus 8 ~~~~~~~ii~-~~~~vLl~~r~~~-~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~--~ 80 (140)
T 2rrk_A 8 MIEVVAAIIE-RDGKILLAQRPAQ-SDQAGLWEFA-GGKVEPDESQRQALVRELREELGIEATV--GEYVASHQREV--S 80 (140)
T ss_dssp EEEEEEEEEE-ETTEEEEEECCSS-CSCCCCEECC-EEECCTTSCHHHHHHHHHHHHSCEEEEC--CEEEEEEEEEE--T
T ss_pred cceEEEEEEE-cCCEEEEEEcCCC-CCCCCEEECC-ceecCCCCCHHHHHHHHHHHHHCCeeec--ccEEEEEEEec--C
Confidence 5555555555 4789999999765 4579999998 9999999999999999999999998754 34455443322 2
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
+ .+...++|.+....+ .++..|+.++.|++++++.+
T Consensus 81 ~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~ 116 (140)
T 2rrk_A 81 G----RIIHLHAWHVPDFHG------TLQAHEHQALVWCSPEEALQ 116 (140)
T ss_dssp T----EEEEEEEEEESEEEE------CCCCSSCSCEEEECHHHHTT
T ss_pred C----cEEEEEEEEEEeeCC------CcCCCccceeEEeCHHHHhh
Confidence 1 234556777654332 23446888999999999965
No 32
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.53 E-value=1.4e-13 Score=130.86 Aligned_cols=115 Identities=20% Similarity=0.233 Sum_probs=76.7
Q ss_pred EEEEEEE--ecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee-ec
Q 004387 39 TVNAWIF--AESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN-VI 115 (757)
Q Consensus 39 av~viV~--n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~-~~ 115 (757)
+|.++++ +..+++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+....+.....+.... ..
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 80 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTD-----ADVWQFV-AGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHF 80 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESS-----SSCEECE-EEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGT
T ss_pred EEEEEEEEecCCCeEEEEEEEcC-----CCCEeCC-ccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceee
Confidence 4555554 22356899999976 3999998 99999999999999999999999997653112211111111 01
Q ss_pred C-CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 116 N-DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 116 ~-~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
. .+ ..+...++|.+...... ..+.+ ++|+.+++|++++++.+++
T Consensus 81 ~~~~--~~~~~~~~f~~~~~~~~--~~~~~-~~E~~~~~W~~~~el~~~~ 125 (149)
T 3son_A 81 SFNK--PYVVPEYCFAIDLTSCS--YQVTL-SLEHSELRWVSYESAIQLL 125 (149)
T ss_dssp CSSS--CSEEEEEEEEEECTTTG--GGCCC-CTTEEEEEEECHHHHHHHC
T ss_pred ccCC--ceEeEEEEEEEEcCCCC--CcccC-CCceeeEEEeCHHHHHHHh
Confidence 1 11 12445677888764211 12344 4799999999999998763
No 33
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.53 E-value=5.1e-14 Score=133.02 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=80.1
Q ss_pred eeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeec
Q 004387 36 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 115 (757)
Q Consensus 36 ~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~ 115 (757)
.|.++.++|++..+++|||+||+ +|.|.+| ||++++|||+.+||+||+.||||+.+.. +..++.+......
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~~~ 87 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP------NGAYFLP-GGEIEGTETKEEAIHREVLEELGISVEI--GCYLGEADEYFYS 87 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT------TSCEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEE
T ss_pred eeeEEEEEEECCCCCeEEEEEcC------CCCEeCC-CcccCCCCCHHHHHHHHHHHHhCCeeEe--eeEEEEEEEEEcC
Confidence 45678888887335899999873 3899998 9999999999999999999999998643 3444443211111
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 116 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 116 ~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
..+.-..+...++|.+...... ....+|+.+++|++++++.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~ 131 (148)
T 2azw_A 88 NHRQTAYYNPGYFYVANTWRQL-----SEPLERTNTLHWVAPEEAVRLL 131 (148)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEC-----SSCC-CCSEEEEECHHHHHHHB
T ss_pred CCCCcceEEEEEEEEEEcCcCC-----cCCCCceeeEEEeeHHHHHhhh
Confidence 1111123456777887764332 2234688899999999998764
No 34
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.53 E-value=5.8e-14 Score=129.14 Aligned_cols=106 Identities=22% Similarity=0.274 Sum_probs=79.2
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~ 117 (757)
.++++++++ .++++||+||+. |.|++| ||++++|||+.+||+||++||||+.+.. +..++.+.+.. +
T Consensus 3 ~~~~~vi~~-~~~~vLl~~r~~------g~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~--~- 69 (126)
T 1vcd_A 3 LGAGGVVFN-AKREVLLLRDRM------GFWVFP-KGHPEPGESLEEAAVREVWEETGVRAEV--LLPLYPTRYVN--P- 69 (126)
T ss_dssp EEEEEEEEC-TTSCEEEEECTT------SCEECC-EECCCTTCCHHHHHHHHHHHHHCCEEEE--EEEEEEEEEEC--T-
T ss_pred eEEEEEEEc-CCCEEEEEEECC------CCccCC-cCcCCCCCCHHHHHHHHHHHhhCcEeee--ccEEeEEEEec--C-
Confidence 467888888 477999999864 789998 9999999999999999999999998643 44555554432 1
Q ss_pred CcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 118 g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
+ .+...++|.+....+. ...++|+.+++|++++++.+.+
T Consensus 70 ~---~~~~~~~~~~~~~~~~-----~~~~~e~~~~~w~~~~el~~~~ 108 (126)
T 1vcd_A 70 K---GVEREVHWFLMRGEGA-----PRLEEGMTGAGWFSPEEARALL 108 (126)
T ss_dssp T---SCEEEEEEEEEEEESC-----CCCCTTCCEEEEECHHHHHHHB
T ss_pred C---ceEEEEEEEEEEcCCC-----CCCCcceeeeEEcCHHHHHHhh
Confidence 1 2345567777654321 2344789999999999998753
No 35
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.53 E-value=4.5e-14 Score=137.74 Aligned_cols=113 Identities=22% Similarity=0.349 Sum_probs=80.2
Q ss_pred EEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCCC
Q 004387 39 TVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 118 (757)
Q Consensus 39 av~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~g 118 (757)
+|++++++ +|++||++|.... .++|.|.+| ||++++|||+.+||+||++||||+ +. .+..++.+... + +
T Consensus 36 ~v~vii~~--~~~vLL~~~~r~~-~~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl-~~--~~~~l~~~~~~---~-~ 104 (170)
T 1v8y_A 36 AVAVIALR--EGRMLFVRQMRPA-VGLAPLEIP-AGLIEPGEDPLEAARRELAEQTGL-SG--DLTYLFSYFVS---P-G 104 (170)
T ss_dssp EEEEEEEE--TTEEEEEECCBTT-TTBCCBBCS-EEECCTTCCHHHHHHHHHHHHHSE-EE--EEEEEEEEESC---T-T
T ss_pred eEEEEEEE--CCEEEEEEEEeCC-CCCCEEECC-ccccCCCCCHHHHHHHHHHHHHCC-Cc--CceeeEEEecC---C-C
Confidence 78888887 7899998876543 568999998 999999999999999999999999 53 46666655321 1 1
Q ss_pred cccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHhcC
Q 004387 119 KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167 (757)
Q Consensus 119 ~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~~ 167 (757)
..+...++|.+...... ....+++|+.+++|++++++.+++..+
T Consensus 105 --~~~~~~~~f~~~~~~~~---~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 105 --FTDEKTHVFLAENLKEV---EAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp --TBCCEEEEEEEEEEEEC---C--------CEEEEECHHHHHHHHHTT
T ss_pred --ccccEEEEEEEEecccc---CCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 12346677877754321 124567899999999999999988754
No 36
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.52 E-value=3.4e-14 Score=141.55 Aligned_cols=125 Identities=17% Similarity=0.099 Sum_probs=82.0
Q ss_pred cccccccCCceeEEEEEEEEecCCC--EEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCce
Q 004387 26 PRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF 103 (757)
Q Consensus 26 ~R~~~h~~g~~hrav~viV~n~~~g--~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L 103 (757)
+|...+..+..|.++.+++ + .++ +|||++|+..+..++|.|++| ||++++|||+.+||+||++||||+++. .+
T Consensus 24 ~~~~~~~~~~~~~~~~v~i-~-~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~ 98 (194)
T 1nqz_A 24 TRTALELPHYRRAAVLVAL-T-READPRVLLTVRSSELPTHKGQIAFP-GGSLDAGETPTQAALREAQEEVALDPA--AV 98 (194)
T ss_dssp ---------CEEEEEEEEE-E-SSSSCBBCEEEEC------CCCEECS-EEECCTTCCHHHHHHHHHHHHHCCCGG--GC
T ss_pred ChhhccCCCCceEEEEEEE-e-cCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCCHHHHHHHHHHHHHCCCcc--ce
Confidence 3444445565666665555 6 366 899999987666789999998 999999999999999999999999865 35
Q ss_pred EEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCcc-ccCCccccccEEEEcHHHH-HHHH
Q 004387 104 EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA-FTLQQTEVSAVKYIAYEEY-KNLL 164 (757)
Q Consensus 104 ~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~-i~~~~~Ev~e~~Wvs~~EL-~~~l 164 (757)
..++.+.+.... .+...++|.+...... . ...+++|+.+++|++++++ .+..
T Consensus 99 ~~l~~~~~~~~~------~~~~~~~f~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 99 TLLGELDDVFTP------VGFHVTPVLGRIAPEA---LDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EEEEECCCEEET------TTEEEEEEEEEECGGG---GGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEEEEccCccCC------CCeEEEEEEEEecCCc---cccCCCccceeEEEEEEHHHhccCCC
Confidence 566655433221 1345678888764221 1 3566789999999999999 6643
No 37
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.52 E-value=2.5e-14 Score=137.45 Aligned_cols=122 Identities=18% Similarity=0.327 Sum_probs=83.7
Q ss_pred cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEe
Q 004387 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (757)
Q Consensus 32 ~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~ 111 (757)
..+.+|+++++++++ .+++|||+||.. +||.|++| ||++++|||+.+||+||++||||+.+. .+........
T Consensus 9 ~~~~~~~~v~~~i~~-~~~~vLl~~r~~----~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~--~~~~~~~~~~ 80 (165)
T 1f3y_A 9 PPEGYRRNVGICLMN-NDKKIFAASRLD----IPDAWQMP-QGGIDEGEDPRNAAIRELREETGVTSA--EVIAEVPYWL 80 (165)
T ss_dssp CCSSCCCEEEEEEEC-TTSCEEEEEETT----EEEEEECC-EEECCTTCCHHHHHHHHHHHHHCCCSE--EEEEECSSCC
T ss_pred CccceeeeEEEEEEC-CCCcEEEEecCC----CCCcEECC-eeccCCCCCHHHHHHHHHHHhhCCChh--hhhcccccce
Confidence 467789999999998 578999999973 36999998 999999999999999999999999853 2222111000
Q ss_pred eeecC-----------CCcccceEEEEEEEEEEeCCCCCccccC-----CccccccEEEEcHHHHHHHH
Q 004387 112 QNVIN-----------DGKFINNEFADVYLVTTLNPIPLEAFTL-----QQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 112 ~~~~~-----------~g~~~~~ei~~vy~~~~~~~~~~~~i~~-----~~~Ev~e~~Wvs~~EL~~~l 164 (757)
....+ ...+ .....++|.+....... .+.+ +++|+.+++|++++++.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~--~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 146 (165)
T 1f3y_A 81 TYDFPPKVREKLNIQWGSDW-KGQAQKWFLFKFTGQDQ--EINLLGDGSEKPEFGEWSWVTPEQLIDLT 146 (165)
T ss_dssp BCCCCHHHHHHHGGGSCSSC-CSCBEEEEEEEECSCGG--GCCCCCCSSSCCSEEEEEEECHHHHHHHB
T ss_pred eeecCccccccccccccccc-cCceEEEEEEEecCCcc--cccccCCCCCCChhheeEEecHHHHHHHh
Confidence 00000 0001 11245667777643321 1233 35799999999999998865
No 38
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.51 E-value=3e-14 Score=141.33 Aligned_cols=119 Identities=14% Similarity=0.115 Sum_probs=81.4
Q ss_pred ceeEEEEEEEEecC------CCEEEEEEeCC-----CCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCce
Q 004387 35 DYHRTVNAWIFAES------TQELLLQRRAD-----FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF 103 (757)
Q Consensus 35 ~~hrav~viV~n~~------~g~ILL~rRs~-----~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L 103 (757)
..|.+|+++|+... +++|||++|+. .+..++|.|.+| ||++++|||+.+||+||++||||+.+. .+
T Consensus 25 p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs~~~aa~REl~EEtGl~~~--~~ 101 (187)
T 3i9x_A 25 PDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENESAEQAAERELEEETSLTDI--PL 101 (187)
T ss_dssp CSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSCHHHHHHHHHHHHHCCCSC--CC
T ss_pred cccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCCHHHHHHHHHHHHHCCCCc--ce
Confidence 45567777665432 34799999964 335678999998 999999999999999999999999864 35
Q ss_pred EEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 104 EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 104 ~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
..++.+........ .+.+..+|.+.+..... ......+|+.+++|++++++.+
T Consensus 102 ~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 102 IPFGVFDKPGRDPR----GWIISRAFYAIVPPEAL--EKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp EEEEEECCTTSSTT----SSEEEEEEEEECCHHHH--HHHHHSTTTTTEEEEEHHHHTT
T ss_pred EEEEEEcCCccCCC----CCEEEEEEEEEEcCccc--CCcCCCCceeEEEEEeHHHccc
Confidence 56665543221111 23455566655422110 0123457899999999999964
No 39
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.51 E-value=3.3e-14 Score=135.86 Aligned_cols=111 Identities=21% Similarity=0.269 Sum_probs=77.8
Q ss_pred CceeEEEEEEEEecCCCE----EEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEE
Q 004387 34 GDYHRTVNAWIFAESTQE----LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF 109 (757)
Q Consensus 34 g~~hrav~viV~n~~~g~----ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~ 109 (757)
...|.++.++|++ +++ ||+++|...+ ++| |.+| ||++++|||+.+||+||++||||+.+.. +..++.+
T Consensus 5 ~~~~~~~~~ii~~--~~~~~~~vLl~~r~~~~--~~g-w~lP-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~ 76 (155)
T 2b06_A 5 QLTILTNICLIED--LETQRVVMQYRAPENNR--WSG-YAFP-GGHVENDEAFAESVIREIYEETGLTIQN--PQLVGIK 76 (155)
T ss_dssp GCEEEEEEEEEEE--TTTTEEEEEEEC-------CCE-EECC-CCBCCTTSCHHHHHHHHHHHHHSEEEES--CEEEEEE
T ss_pred cCcEEEEEEEEEE--CCCCeEEEEEEECCCCC--CCC-Eecc-ceecCCCCCHHHHHHHHHHHHhCccccC--CcEEEEE
Confidence 3467788888887 455 9999887754 788 9998 9999999999999999999999998764 3444444
Q ss_pred EeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 110 LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 110 ~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
.+.. ..+ .+...++|.+..... .+.+.|+.+++|++++++.++
T Consensus 77 ~~~~--~~~---~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 77 NWPL--DTG---GRYIVICYKATEFSG------TLQSSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp EEEC--TTS---CEEEEEEEEECEEEE------CCCCBTTBEEEEEEGGGGGGS
T ss_pred eecc--CCC---ceEEEEEEEEEecCC------CCCCCcceeeEEeeHHHhhhC
Confidence 3322 111 245667777765332 223468899999999999664
No 40
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.51 E-value=6.4e-14 Score=137.91 Aligned_cols=112 Identities=19% Similarity=0.186 Sum_probs=80.8
Q ss_pred eeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeec
Q 004387 36 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 115 (757)
Q Consensus 36 ~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~ 115 (757)
.|+++.+++++ .+++|||++|... .++|.|.+| ||++++|||+.+||+||++||||+.+. .+..++.+.+...
T Consensus 23 ~~~~~~~~vi~-~~~~vLL~~r~~~--~~~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~~~~- 95 (176)
T 3q93_A 23 ASRLYTLVLVL-QPQRVLLGMKKRG--FGAGRWNGF-GGKVQEGETIEDGARRELQEESGLTVD--ALHKVGQIVFEFV- 95 (176)
T ss_dssp CEEEEEEEEEE-CSSEEEEEEECSS--TTTTSEECE-EEECCTTSCHHHHHHHHHHHHHSCEES--CCEEEEEEEEEET-
T ss_pred CCcEEEEEEEE-eCCEEEEEEEcCC--CCCCeEECc-eecCCCCCCHHHHHHHHHHHHHCCcce--eeEEEEEEEEEcC-
Confidence 35566666666 4789999998653 468999998 999999999999999999999999975 3566666554332
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 116 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 116 ~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
.. ..+...++|.+....+ .+.+.|..+++|++++++.+.
T Consensus 96 -~~--~~~~~~~~f~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 134 (176)
T 3q93_A 96 -GE--PELMDVHVFCTDSIQG------TPVESDEMRPCWFQLDQIPFK 134 (176)
T ss_dssp -TC--SCEEEEEEEEESCEES------CCCCCSSEEEEEEETTCCCGG
T ss_pred -CC--CcEEEEEEEEEECCCC------CcCCCcceeeEEeeHHHcccc
Confidence 11 1244567777754332 233456778899999999653
No 41
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.50 E-value=5.6e-14 Score=136.77 Aligned_cols=117 Identities=13% Similarity=0.250 Sum_probs=77.1
Q ss_pred cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEe
Q 004387 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (757)
Q Consensus 32 ~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~ 111 (757)
.....+..|.++|++ +|+|||+||... +|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+
T Consensus 18 ~~~~~~~~v~~ii~~--~~~vLL~~r~~~----~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~ 88 (171)
T 3id9_A 18 IENIMQVRVTGILIE--DEKVLLVKQKVA----NRDWSLP-GGRVENGETLEEAMIREMREETGLEVKI--KKLLYVCDK 88 (171)
T ss_dssp ----CEEEEEEEEEE--TTEEEEEECSST----TCCEECC-EEECCTTCCHHHHHHHHHHHHHCCCEEE--EEEEEEEEE
T ss_pred cCCceEEEEEEEEEE--CCEEEEEEEECC----CCeEECC-CccCCCCCCHHHHHHHHHHHHHCCcccc--ceEEEEEcc
Confidence 344567778888887 689999998763 7999998 9999999999999999999999998643 333333332
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCC-CccccCCccccccEEEEcHHHHHHH
Q 004387 112 QNVINDGKFINNEFADVYLVTTLNPIP-LEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 112 ~~~~~~g~~~~~ei~~vy~~~~~~~~~-~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
.. .. .+....+|.+....+.. .....++++|+.+++|++++++.++
T Consensus 89 ~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 89 PD--AS----PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY 135 (171)
T ss_dssp TT--SS----SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGG
T ss_pred cC--CC----CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC
Confidence 11 11 22345566666543321 1111235689999999999999764
No 42
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.50 E-value=6e-14 Score=134.04 Aligned_cols=114 Identities=22% Similarity=0.362 Sum_probs=80.5
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee
Q 004387 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (757)
Q Consensus 34 g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~ 113 (757)
..+|.+++++|++ +++|||++| +|.|.+| ||++++|||+.+||+||++||||+.+.... .++.+.+..
T Consensus 16 ~~~~~~~~~ii~~--~~~vLl~~r-------~~~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~--~~~~~~~~~ 83 (154)
T 2pqv_A 16 TVFGVRATALIVQ--NHKLLVTKD-------KGKYYTI-GGAIQVNESTEDAVVREVKEELGVKAQAGQ--LAFVVENRF 83 (154)
T ss_dssp EEEEEEEEECCEE--TTEEEEEEE-------TTEEECE-EEECBTTCCHHHHHHHHHHHHHCCCEEEEE--EEEEEEEEE
T ss_pred ceEeEEEEEEEEE--CCEEEEEec-------CCeEECc-ccCcCCCCCHHHHHHHHHHHHhCCeeeece--EEEEEeeee
Confidence 3467778888887 689999998 5899998 999999999999999999999999875433 333332222
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 114 ~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
.. .+ ...+.+.++|.+......+. ....++|+.+++|++++++.++
T Consensus 84 ~~-~~-~~~~~~~~~f~~~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 84 EV-DG-VSYHNIEFHYLVDLLEDAPL--TMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EE-TT-EEEEEEEEEEEEEESSCCCS--EEEETTEEEEEEEEEGGGGGGS
T ss_pred cC-CC-CcceEEEEEEEEEecCCCCc--ccCCCCceeeEEEeEHHHHhhc
Confidence 11 11 12345667788876543220 0123467899999999999763
No 43
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.50 E-value=9.4e-14 Score=138.18 Aligned_cols=120 Identities=20% Similarity=0.222 Sum_probs=86.6
Q ss_pred cccccccccccCCce-----eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCC
Q 004387 22 GITKPRSEVHRVGDY-----HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 96 (757)
Q Consensus 22 G~~~~R~~~h~~g~~-----hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI 96 (757)
|....|..|..+|.. +.++.+++++ +++|||++|...+ .+|.|.+| ||++++|||+.+||+||++||||+
T Consensus 20 G~~~~~~~~~~~~~~~~~~~~~~v~~ii~~--~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 94 (189)
T 3cng_A 20 GDTLPRYICPKCHTIHYQNPKVIVGCIPEW--ENKVLLCKRAIAP--YRGKWTLP-AGFMENNETLVQGAARETLEEANA 94 (189)
T ss_dssp TCSSCEEEETTTTEEECCCCEEEEEEEEEE--TTEEEEEEESSSS--STTCEECS-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCCCcceECCCCCCccCCCCceEEEEEEEe--CCEEEEEEccCCC--CCCeEECc-eeeccCCCCHHHHHHHHHHHHHCC
Confidence 333456667766633 3467777776 6899999998753 37999998 999999999999999999999999
Q ss_pred ccCCCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHH
Q 004387 97 NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161 (757)
Q Consensus 97 ~v~~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~ 161 (757)
.+... ..++.+.+ +. .+.+.++|.+...... +. .++|+.+++|++++++.
T Consensus 95 ~~~~~--~~~~~~~~----~~----~~~~~~~f~~~~~~~~----~~-~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 95 RVEIR--ELYAVYSL----PH----ISQVYMLFRAKLLDLD----FF-PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp CEEEE--EEEEEEEE----GG----GTEEEEEEEEEECCSC----CC-CCTTEEEEEEECTTTCC
T ss_pred ccccc--eeEEEEec----CC----CcEEEEEEEEEeCCCc----cC-CCccceeEEEECHHHcC
Confidence 86532 22222222 11 2456788888765432 12 35789999999999995
No 44
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.49 E-value=4.8e-14 Score=134.02 Aligned_cols=115 Identities=21% Similarity=0.195 Sum_probs=76.1
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~ 117 (757)
.+|++++++ .+|++||+++... ...++.|.+| ||++++|||+.+||+||++||||+.+. .+..++.+.. ..
T Consensus 6 ~~v~vi~~~-~~~~vLLv~~~r~-~~~~~~w~~P-gG~ve~gEt~~~aa~REl~EEtGl~~~--~~~~l~~~~~----~~ 76 (145)
T 2w4e_A 6 RAVFILPVT-AQGEAVLIRQFRY-PLRATITEIV-AGGVEKGEDLGAAAARELLEEVGGAAS--EWVPLPGFYP----QP 76 (145)
T ss_dssp EEEEEEEEE-TTSEEEEEEEEET-TTTEEEEECE-EEECCTTCCHHHHHHHHHHHHHCEECS--EEEECCCBBS----CT
T ss_pred CEEEEEEEc-CCCEEEEEEEEec-CCCCCEEEeC-CccCCCCCCHHHHHHHHHHHhhCCccC--eEEEEecCcC----CC
Confidence 478888888 5788877654322 1235799998 999999999999999999999999863 3444443221 11
Q ss_pred CcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHhc
Q 004387 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166 (757)
Q Consensus 118 g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~ 166 (757)
+ . .....++|.+..... .....+++|+.+++|++++++.+++..
T Consensus 77 ~-~-~~~~~~~f~~~~~~~---~~~~~~~~E~~~~~w~~~~el~~~~~~ 120 (145)
T 2w4e_A 77 S-I-SGVVFYPLLALGVTL---GAAQLEDTETIERVVLPLAEVYRMLEA 120 (145)
T ss_dssp T-T-CCCEEEEEEEEEEEE---C--------CEEEEEEEHHHHHHHHHH
T ss_pred C-c-cCceEEEEEEEeccc---CCCCCCCCCeEEEEEEeHHHHHHHHHc
Confidence 1 1 234567777763221 123456789999999999999998765
No 45
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.49 E-value=5.5e-14 Score=143.62 Aligned_cols=135 Identities=19% Similarity=0.189 Sum_probs=87.4
Q ss_pred ccccccccccCCceeEEEEEEEEecCCCEEEEEEeCCCC------------------------------CCCCCCeeecc
Q 004387 23 ITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK------------------------------DSWPGMWDISS 72 (757)
Q Consensus 23 ~~~~R~~~h~~g~~hrav~viV~n~~~g~ILL~rRs~~k------------------------------~~~pG~W~lPv 72 (757)
....|..++. |.+|+|+++++.++++||+|+-... ...++.|++|
T Consensus 26 ~~~~~e~v~~----~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welP- 100 (218)
T 3q91_A 26 AQKSWDFMKT----HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELC- 100 (218)
T ss_dssp ---------C----CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECE-
T ss_pred CEEEEEEEEc----CCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECC-
Confidence 3344655554 4589999998556788887643211 1116899998
Q ss_pred ccccCC-CCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCC--CccccCCcccc
Q 004387 73 AGHISA-GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP--LEAFTLQQTEV 149 (757)
Q Consensus 73 GG~ve~-GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~--~~~i~~~~~Ev 149 (757)
||++++ |||+.+||+||++||||+.+....+..++.+.... + ...+.+++|.+....... .....++++|+
T Consensus 101 gG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~----g--~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~ 174 (218)
T 3q91_A 101 AGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGV----G--LTGSRQTMFYTEVTDAQRSGPGGGLVEEGEL 174 (218)
T ss_dssp EEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---------CCEEEEEEEEEECGGGBCC---------CC
T ss_pred cceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCC----C--ccceEEEEEEEEECCcccccCCCCCCCCCcE
Confidence 999999 99999999999999999997556678887764321 1 124567888888643211 11235667899
Q ss_pred ccEEEEcHHHHHHHHhcCC
Q 004387 150 SAVKYIAYEEYKNLLAKDD 168 (757)
Q Consensus 150 ~e~~Wvs~~EL~~~l~~~~ 168 (757)
.++.|++++++.+++..+.
T Consensus 175 ~ev~wv~l~el~~~i~~g~ 193 (218)
T 3q91_A 175 IEVVHLPLEGAQAFADDPD 193 (218)
T ss_dssp EEEEEEEGGGHHHHHHCTT
T ss_pred EEEEEEEHHHHHHHHHcCC
Confidence 9999999999999988653
No 46
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.49 E-value=3.6e-13 Score=130.99 Aligned_cols=118 Identities=17% Similarity=0.228 Sum_probs=84.1
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEE----
Q 004387 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL---- 110 (757)
Q Consensus 35 ~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~---- 110 (757)
.+|.++++++++ .+++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.
T Consensus 6 ~~~~~v~~~i~~-~~~~vLl~~r~~-----~~~w~~p-~G~~e~gE~~~~aa~RE~~EE~G~~~~~--~~~~~~~~~~~~ 76 (164)
T 2kdv_A 6 GYRPNVGIVICN-RQGQVMWARRFG-----QHSWQFP-QGGINPGESAEQAMYRELFEEVGLSRKD--VRILASTRNWLR 76 (164)
T ss_dssp SEEEEEEEEEEC-TTSEEEEEEETT-----CCCEECC-EEECCTTCCHHHHHHHHHHHHHCCCGGG--EEEEEECSSCEE
T ss_pred CCCcEEEEEEEc-cCCEEEEEEEcC-----CCeEECC-eeecCCCCCHHHHHHHHHHHHHCCCccc--eEEEEEecceeE
Confidence 578899999998 478999999874 6899998 9999999999999999999999998653 55555532
Q ss_pred eeeecCC-----CcccceEEEEEEEEEEeCCCCCccccCC---ccccccEEEEcHHHHHHH
Q 004387 111 QQNVIND-----GKFINNEFADVYLVTTLNPIPLEAFTLQ---QTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 111 ~~~~~~~-----g~~~~~ei~~vy~~~~~~~~~~~~i~~~---~~Ev~e~~Wvs~~EL~~~ 163 (757)
|...... .........++|.+.+..+.. .+.++ .+|+.+++|++++++.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 77 YKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDA--EINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp EECCTTTCCTTSSSCCCEEEEEEEEEEESSCGG--GCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred EecCcceeeeccCcccccceeEEEEEEecCCcc--ccccCCCCCchhceEEEecHHHhhhh
Confidence 2111000 001123356778887654321 23333 369999999999998654
No 47
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.49 E-value=2.9e-14 Score=140.52 Aligned_cols=116 Identities=20% Similarity=0.227 Sum_probs=85.5
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~ 117 (757)
.++.+++++ .++++||++|... ..++|.|++| ||++++|||+.+||+||++||||+.+. .+..++.+.. ..
T Consensus 42 ~~v~v~i~~-~~~~vLL~~r~~~-~~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~----~~ 112 (182)
T 2yvp_A 42 AASFVLPVT-ERGTALLVRQYRH-PTGKFLLEVP-AGKVDEGETPEAAARRELREEVGAEAE--TLIPLPSFHP----QP 112 (182)
T ss_dssp EEEEEEEBC-TTSEEEEEEEEEG-GGTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCEECS--CEEECCCBCS----CT
T ss_pred CEEEEEEEc-CCCEEEEEEeccC-CCCCcEEEec-cccCCCCcCHHHHHHHHHHHHhCCCcc--cEEEEEEEeC----CC
Confidence 478888887 5789999988654 3568999998 999999999999999999999999864 3555544322 11
Q ss_pred CcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHhc
Q 004387 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166 (757)
Q Consensus 118 g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~ 166 (757)
+ ..+...++|.+...... ..+..+++|+.+++|++++++.+++..
T Consensus 113 ~--~~~~~~~~f~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~~~ 157 (182)
T 2yvp_A 113 S--FTAVVFHPFLALKARVV--TPPTLEEGELLESLELPLTEVYALLAK 157 (182)
T ss_dssp T--TBCCEEEEEEECSCEEC--SCCCCCTTCCEEEEEEEHHHHHHHHHT
T ss_pred C--ccccEEEEEEEeccccC--CCCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 1 12346677877532111 123456789999999999999998875
No 48
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.48 E-value=4.1e-14 Score=145.29 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=83.1
Q ss_pred eeEEEEEEEEe--cCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee
Q 004387 36 YHRTVNAWIFA--ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (757)
Q Consensus 36 ~hrav~viV~n--~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~ 113 (757)
.+.+|+++|+. ..+++|||++|... .++|.|.+| ||++++|||+.+||+||++||||+.+. .+..++.+....
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lP-GG~ve~gEs~~~Aa~REl~EEtGl~~~--~~~~l~~~~~~~ 86 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLM-GGFVQKDESVDDAAKRVLAELTGLENV--YMEQVGAFGAID 86 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECE-EEECCTTSCHHHHHHHHHHHHHCCCSC--EEEEEEEECCTT
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECC-eeccCCCCCHHHHHHHHHHHHHCCCCC--ceEEEEEeCCCC
Confidence 46778888873 23568999999763 468999998 999999999999999999999999864 356666654322
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 114 ~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
..+. .+.+..+|.+.+.... ....++|+.+++|++++++.+
T Consensus 87 r~~~----~~~v~~~y~a~~~~~~----~~~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 87 RDPG----ERVVSIAYYALININE----YDRELVQKHNAYWVNINELPA 127 (226)
T ss_dssp SSSS----SCEEEEEEEEECCTTS----SCHHHHHHTTEEEEETTSCCC
T ss_pred cCCC----ceEEEEEEEEEecCcc----cccCCccccceEEEEHHHhhh
Confidence 1111 2456667777654321 123457899999999999853
No 49
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.46 E-value=2.3e-13 Score=128.64 Aligned_cols=112 Identities=21% Similarity=0.463 Sum_probs=75.8
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~ 117 (757)
++++++|++..+++|||+||.. +|.|.+| ||++++|||+.+||+||++||||+.+.. +..+..+.... . .
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gEs~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~-~-~ 74 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-----SDSWSFP-RGKISKDENDIDCCIREVKEEIGFDLTD--YIDDNQFIERN-I-Q 74 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-----SSCCBCC-EECCCSSSCHHHHHHHHHHHHTSCCCSS--SSCSSCEEEEE-E-T
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-----CCcEECC-cccCCCCCCHHHHHHHHHHHHHCCCchH--hcccccccccc-c-C
Confidence 3567777773338999998753 5899998 9999999999999999999999998653 22222221111 1 1
Q ss_pred CcccceEEEEEEEEEEeCCCCCccccC-CccccccEEEEcHHHHHHHHhc
Q 004387 118 GKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLLAK 166 (757)
Q Consensus 118 g~~~~~ei~~vy~~~~~~~~~~~~i~~-~~~Ev~e~~Wvs~~EL~~~l~~ 166 (757)
+ ...++|++....... ...+ .++|+.+++|++++++.+++..
T Consensus 75 ~-----~~~~~~~~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~~~ 117 (146)
T 2jvb_A 75 G-----KNYKIFLISGVSEVF--NFKPQVRNEIDKIEWFDFKKISKTMYK 117 (146)
T ss_dssp T-----EEEEEEEECCCCSSS--CCCCCCSSSCCCEEEEEHHHHHTGGGC
T ss_pred C-----ceEEEEEEEeccccc--cCCcCCcchhheeEEeEHHHHHhhhcc
Confidence 1 234555554322111 1233 3679999999999999987654
No 50
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.46 E-value=2.6e-13 Score=136.12 Aligned_cols=116 Identities=17% Similarity=0.172 Sum_probs=76.5
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
+.+|.+++++..+++|||+||.. .++|.|.+| ||++++|||+.+||+||++||||+.+.... .++. ......+
T Consensus 26 ~v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lP-GG~ve~gEs~~~aA~REl~EEtGl~~~~~~--l~~~-~~~~~~~ 98 (199)
T 3h95_A 26 QVGVAGAVFDESTRKILVVQDRN---KLKNMWKFP-GGLSEPEEDIGDTAVREVFEETGIKSEFRS--VLSI-RQQHTNP 98 (199)
T ss_dssp CCEEEEEEEETTTTEEEEEEESS---SSTTSBBCC-EEECCTTCCHHHHHHHHHHHHHCCCEEEEE--EEEE-EECC---
T ss_pred cceEEEEEEeCCCCEEEEEEEcC---CCCCCEECC-ccccCCCCCHHHHHHHHHHHHhCCccccce--EEEE-EeeecCC
Confidence 34577777775568999999865 257999998 999999999999999999999999865322 2221 1111111
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
++ ......+|.+.+.... ....++++|+.+++|++++++.++.
T Consensus 99 ~~---~~~~~~~~~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~ 141 (199)
T 3h95_A 99 GA---FGKSDMYIICRLKPYS--FTINFCQEECLRCEWMDLNDLAKTE 141 (199)
T ss_dssp ---------CEEEEEEEEESC--CCCCCCTTTEEEEEEEEHHHHHHCS
T ss_pred CC---ceeEEEEEEEEEcCCC--cccCCCccceeeeEEEeHHHHhhhh
Confidence 11 1122233444432221 1235667899999999999998753
No 51
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.46 E-value=3.3e-13 Score=142.01 Aligned_cols=118 Identities=13% Similarity=0.216 Sum_probs=85.8
Q ss_pred cccccccCCcee----EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCC
Q 004387 26 PRSEVHRVGDYH----RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKD 101 (757)
Q Consensus 26 ~R~~~h~~g~~h----rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~ 101 (757)
.|..|..+|..| ..+.+++++ .+++|||+||...+ +|+|++| ||++++|||+++||+||++||||+.+.
T Consensus 124 ~~~~C~~C~~~~yp~~~~~viv~v~-~~~~vLL~rr~~~~---~g~w~lP-gG~vE~GEt~eeAa~REv~EEtGl~v~-- 196 (269)
T 1vk6_A 124 WAMLCSHCRERYYPQIAPCIIVAIR-RDDSILLAQHTRHR---NGVHTVL-AGFVEVGETLEQAVAREVMEESGIKVK-- 196 (269)
T ss_dssp SCEEESSSSCEECCCCEEEEEEEEE-ETTEEEEEEETTTC---SSCCBCE-EEECCTTCCHHHHHHHHHHHHHCCEEE--
T ss_pred eeeeCCCCCCEecCCCCcEEEEEEE-eCCEEEEEEecCCC---CCcEECC-cCcCCCCCCHHHHHHHHHHHHhCceee--
Confidence 356666677544 123333344 36899999997643 6999998 999999999999999999999999864
Q ss_pred ceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 102 AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 102 ~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
.+..++.+.+. . .+....+|.+...++ .+.++++|+.+++|++++++.+
T Consensus 197 ~~~~~~~~~~~--~------~~~~~~~f~a~~~~~----~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 197 NLRYVTSQPWP--F------PQSLMTAFMAEYDSG----DIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp EEEEEEEEEEE--T------TEEEEEEEEEEEEEC----CCCCCTTTEEEEEEEETTSCCS
T ss_pred eEEEEEEEecC--C------CCEEEEEEEEEECCC----CcCCCCcceEEEEEEEHHHhhh
Confidence 35566555432 1 134667788876543 2356678999999999999854
No 52
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.46 E-value=3.7e-13 Score=126.34 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=76.6
Q ss_pred eEEEEEEEEec-CCCE--EEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee
Q 004387 37 HRTVNAWIFAE-STQE--LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (757)
Q Consensus 37 hrav~viV~n~-~~g~--ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~ 113 (757)
+.+++++|++. .+|+ +||++|... |+.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+....
T Consensus 9 ~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~ 81 (139)
T 2yyh_A 9 LLATDVIIRLWDGENFKGIVLIERKYP----PVGLALP-GGFVEVGERVEEAAAREMREETGLEVRL--HKLMGVYSDPE 81 (139)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECC-EEECCTTCCHHHHHHHHHHHHHCCCCEE--EEEEEEECCTT
T ss_pred eEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECc-cccCCCCCCHHHHHHHHHHHHHCCCccc--ceEEEEECCCC
Confidence 45666666651 3577 999999753 4569998 9999999999999999999999998643 34444443211
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHH
Q 004387 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161 (757)
Q Consensus 114 ~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~ 161 (757)
... ..+.+.++|.+... +. +. .++|+.+++|++++++.
T Consensus 82 --~~~--~~~~~~~~f~~~~~-~~----~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 82 --RDP--RAHVVSVVWIGDAQ-GE----PK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp --SCT--TSCEEEEEEEEEEE-SC----CC-CCTTEEEEEEECTTSCC
T ss_pred --cCC--CceEEEEEEEEecC-Cc----cC-CCCCcceEEEEEHHHCC
Confidence 111 13567788888763 21 12 45789999999999996
No 53
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.46 E-value=1.9e-13 Score=141.65 Aligned_cols=113 Identities=21% Similarity=0.289 Sum_probs=82.6
Q ss_pred eeEEEEEEEE--ecCCCEEEEEEeCCCCCCCCCCeeeccccccCC--CCCHHHHHHHHHHHHhCCccCCCceEEEEEEEe
Q 004387 36 YHRTVNAWIF--AESTQELLLQRRADFKDSWPGMWDISSAGHISA--GDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (757)
Q Consensus 36 ~hrav~viV~--n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~--GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~ 111 (757)
.+.+|.++|+ +..+++|||++|.. ..++|.|.+| ||++++ |||+.+||+||++||||+.+. .+..++.+..
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~lP-GG~ve~~~gEs~~~AA~REl~EEtGl~~~--~~~~l~~~~~ 95 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWGLP-GGFIDETCDESLEQTVLRKLAEKTAVVPP--YIEQLCTVGN 95 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCS--SSSTTCEECS-EEECCTTTCSBHHHHHHHHHHHHHSSCCS--EEEEEEEEEE
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcC--CCCCCCEECC-ccccCCCCCcCHHHHHHHHHHHHHCCCCC--ceeeEEEeCC
Confidence 3567777776 32345899999985 3568999998 999999 999999999999999999863 4666666665
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHH
Q 004387 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161 (757)
Q Consensus 112 ~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~ 161 (757)
....+. .+.+..+|.+.+.... ....++|+.+++|++++++.
T Consensus 96 ~~r~~~----~~~~~~~y~a~~~~~~----~~~~~~e~~~~~W~~~~el~ 137 (240)
T 3gz5_A 96 NSRDAR----GWSVTVCYTALMSYQA----CQIQIASVSDVKWWPLADVL 137 (240)
T ss_dssp SSSSTT----SCEEEEEEEEECCHHH----HHHHHTTCTTEEEEEHHHHT
T ss_pred CccCCC----ceEEEEEEEEEecccc----cCCCCCcccceEEecHHHcc
Confidence 332222 2456677776653221 13345789999999999994
No 54
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.45 E-value=3.4e-13 Score=134.64 Aligned_cols=120 Identities=13% Similarity=0.205 Sum_probs=83.9
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCC----CC-CCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEe
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFK----DS-WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k----~~-~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~ 111 (757)
|.+|.++++++.++++||+++.... .. .++.|++| ||+++ |||+.+||+||++||||+.+ ..+..++.+..
T Consensus 45 ~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~~~~aa~REl~EEtG~~~--~~~~~l~~~~~ 120 (191)
T 3o6z_A 45 GNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDEPEVCIRKEAIEETGYEV--GEVRKLFELYM 120 (191)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSCHHHHHHHHHHHHC-CCC--SCEEEEEEEES
T ss_pred CCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCCHHHHHHHHHHHHhCCcc--CcEEEEEEEEe
Confidence 4578888888546899998765321 11 57899998 99999 99999999999999999986 35777776543
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcc-ccCCccccccEEEEcHHHHHHHHhcC
Q 004387 112 QNVINDGKFINNEFADVYLVTTLNPIPLEA-FTLQQTEVSAVKYIAYEEYKNLLAKD 167 (757)
Q Consensus 112 ~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~-i~~~~~Ev~e~~Wvs~~EL~~~l~~~ 167 (757)
. + + ......++|.+.......... ... ++|+.+++|++++++.+++..+
T Consensus 121 ~---~-~--~~~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 121 S---P-G--GVTELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp C---T-T--TBCCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHHHHHS
T ss_pred C---C-C--ccCcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHHHHHHHHcC
Confidence 2 1 1 123467888887644321100 122 6799999999999999988764
No 55
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.45 E-value=1.5e-13 Score=138.84 Aligned_cols=130 Identities=18% Similarity=0.279 Sum_probs=83.5
Q ss_pred ccccccccccccCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccC-CCCCHHHHHHHHHHHHhCCccC
Q 004387 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHIS-AGDSSLISAQRELQEELGINLP 99 (757)
Q Consensus 21 ~G~~~~R~~~h~~g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve-~GEt~~eAAiREl~EEtGI~v~ 99 (757)
.|....|..++.. .+|++++++ .+++|||++|.... .++|.|.+| ||+++ +|||+.+||+||+.||||+.+.
T Consensus 31 ~G~~~~~~~~~~~----~av~v~i~~-~~~~vLLvrr~r~~-~~~~~w~lP-gG~ve~~gEs~~~aa~REl~EEtGl~~~ 103 (207)
T 1mk1_A 31 GGGIVTREVVEHF----GAVAIVAMD-DNGNIPMVYQYRHT-YGRRLWELP-AGLLDVAGEPPHLTAARELREEVGLQAS 103 (207)
T ss_dssp ---CEEEEEEEEC----CEEEEEECC-TTSEEEEEEEEETT-TTEEEEECC-EEECCSTTCCHHHHHHHHHHHHHCEEEE
T ss_pred CCCEEEEEEEeCC----CEEEEEEEc-CCCEEEEEEeecCC-CCCcEEEeC-CccccCCCCCHHHHHHHHHHHHHCCccc
Confidence 3443344444433 378888887 57899998876543 467899998 99999 9999999999999999999864
Q ss_pred CCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHhc
Q 004387 100 KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166 (757)
Q Consensus 100 ~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~ 166 (757)
.+..++.+ +. .++. ..+..++|.+........ ....+++|+.++.|++++++.+++..
T Consensus 104 --~~~~l~~~-~~--~~~~---~~~~~~~f~~~~~~~~~~-~~~~~~~E~~~~~Wv~~~el~~~~~~ 161 (207)
T 1mk1_A 104 --TWQVLVDL-DT--APGF---SDESVRVYLATGLREVGR-PEAHHEEADMTMGWYPIAEAARRVLR 161 (207)
T ss_dssp --EEEEEEEE-CS--CTTT---BCCCEEEEEEEEEEECCC-----------CEEEEEHHHHHHHHHT
T ss_pred --ccEEEEEE-Ec--CCCc---cccEEEEEEEEccccCCC-CCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 34555554 21 1211 233567787765433221 01245678999999999999998775
No 56
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.45 E-value=2.5e-13 Score=136.13 Aligned_cols=116 Identities=20% Similarity=0.257 Sum_probs=77.4
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee
Q 004387 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (757)
Q Consensus 34 g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~ 113 (757)
+..++++.+++.+..+++|||++|.. .||.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.
T Consensus 38 ~~~~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEt~~eaa~REl~EEtGl~~~~--~~~l~~~~~~- 109 (194)
T 2fvv_A 38 GYKKRAACLCFRSESEEEVLLVSSSR----HPDRWIVP-GGGMEPEEEPSVAAVREVCEEAGVKGTL--GRLVGIFENQ- 109 (194)
T ss_dssp SCEEEEEEEEESSTTCCEEEEEECSS----CTTSEECS-EEECCTTCCHHHHHHHHHHHHHCEEEEE--EEEEEEEEET-
T ss_pred CccccEEEEEEEECCCCEEEEEEEeC----CCCcEECC-CCcCCCCcCHHHHHHHHHHHHhCCcccc--ceEEEEEEcC-
Confidence 33444544444233468999999864 26999998 9999999999999999999999998643 4455555421
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHhc
Q 004387 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166 (757)
Q Consensus 114 ~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~ 166 (757)
.. ....++|.+.+..... ....+.++..+++|++++++.+++..
T Consensus 110 ---~~----~~~~~~f~~~~~~~~~--~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 110 ---ER----KHRTYVYVLIVTEVLE--DWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp ---TT----TEEEEEEEEEEEEECS--SCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred ---CC----ceEEEEEEEEEccccC--CCCCcccccceEEEEEHHHHHHHHhc
Confidence 11 1345677766532211 11111224578999999999987654
No 57
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.44 E-value=1.9e-13 Score=144.30 Aligned_cols=117 Identities=17% Similarity=0.254 Sum_probs=85.5
Q ss_pred eeEEEEEEEEecCC----CEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEe
Q 004387 36 YHRTVNAWIFAEST----QELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (757)
Q Consensus 36 ~hrav~viV~n~~~----g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~ 111 (757)
.+.+|+++|+...+ ++|||++|... .++|.|.+| ||++++|||+.+||+||++||||+.+....+..++++..
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lP-GG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~~~~~ 114 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALP-GGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSR 114 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECC-EEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEEEECC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECC-ccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEEEEcC
Confidence 45677777765323 38999999764 468999998 999999999999999999999998876556777776643
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHH
Q 004387 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 112 ~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
....+ ..+.+.++|.+.+.... ....+|+.+++|++++++.+.+
T Consensus 115 ~~r~~----~~~~~~~~y~a~~~~~~-----~~~~~E~~~~~W~~~~e~~~~~ 158 (273)
T 2fml_A 115 PDRDP----RGWVVTVSYLAFIGEEP-----LIAGDDAKEVHWFNLERHGQHI 158 (273)
T ss_dssp TTSST----TSSEEEEEEEEECCCCC-----CCCCTTEEEEEEEEEEEETTEE
T ss_pred CCCCC----CceEEEEEEEEEeCCCC-----CCCCcceeeEEEEEhhHhhhhh
Confidence 22111 12456778877654321 3345789999999999876544
No 58
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.44 E-value=2.8e-13 Score=136.08 Aligned_cols=113 Identities=19% Similarity=0.226 Sum_probs=83.4
Q ss_pred EEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCCC
Q 004387 39 TVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 118 (757)
Q Consensus 39 av~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~g 118 (757)
+|.+++++ .+ +|||++|... ...+|.|++| ||++++|||+.+||+||++||||+.+. .+..++.+... + +
T Consensus 51 av~vl~~~-~~-~vLLvrq~r~-~~~~~~welP-gG~ve~gEs~~~aA~REl~EEtGl~~~--~~~~l~~~~~~---~-~ 120 (198)
T 1vhz_A 51 AVMIVPIV-DD-HLILIREYAV-GTESYELGFS-KGLIDPGESVYEAANRELKEEVGFGAN--DLTFLKKLSMA---P-S 120 (198)
T ss_dssp EEEEEEEE-TT-EEEEEEEEET-TTTEEEEECE-EEECCTTCCHHHHHHHHHHHHHSEEEE--EEEEEEEEECC---T-T
T ss_pred EEEEEEEE-CC-EEEEEEcccC-CCCCcEEEeC-cccCCCCcCHHHHHHHHHHHHHCCCcC--ceEEEEEEeCC---C-C
Confidence 67777777 34 9999877543 3457899998 999999999999999999999999864 35666665432 1 1
Q ss_pred cccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHHHhc
Q 004387 119 KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166 (757)
Q Consensus 119 ~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~ 166 (757)
. .....++|.+...... ....+++|+.++.|++++++.+++..
T Consensus 121 -~-~~~~~~~f~a~~~~~~---~~~~~~~E~~~~~w~~~~el~~~~~~ 163 (198)
T 1vhz_A 121 -Y-FSSKMNIVVAQDLYPE---SLEGDEPEPLPQVRWPLAHMMDLLED 163 (198)
T ss_dssp -T-CCCEEEEEEEEEEEEC---CCCCCCSSCCCEEEEEGGGGGGGGGC
T ss_pred -c-cCcEEEEEEEEeCCcc---cCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 1 2345677887754322 12456788999999999999988765
No 59
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.44 E-value=4.7e-13 Score=133.24 Aligned_cols=110 Identities=21% Similarity=0.298 Sum_probs=75.4
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
.+++.++|++ +++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+.... .++.+.+.....
T Consensus 4 ~~v~~~vi~~--~~~vLL~~r~~-----~g~W~lP-GG~ve~gEs~~~aa~REl~EEtGl~~~~~~--~~~~~~~~~~~~ 73 (188)
T 3fk9_A 4 QRVTNCIVVD--HDQVLLLQKPR-----RGWWVAP-GGKMEAGESILETVKREYWEETGITVKNPE--LKGIFSMVIFDE 73 (188)
T ss_dssp CEEEEEEEEE--TTEEEEEECTT-----TCCEECC-EEECCTTCCHHHHHHHHHHHHHSCEESSCE--EEEEEEEEEEET
T ss_pred eEEEEEEEEE--CCEEEEEEeCC-----CCeEECC-eecccCCCCHHHHHHHHHHHHHCCCCCCce--EEEEEEEEecCC
Confidence 3567777776 68999999853 6999998 999999999999999999999999976543 344443322211
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
.....+...++|.+....+. +.. ..|..+++|++++++.+
T Consensus 74 -~~~~~~~~~~~f~a~~~~~~----~~~-~~e~~~~~W~~~~el~~ 113 (188)
T 3fk9_A 74 -GKIVSEWMLFTFKATEHEGE----MLK-QSPEGKLEWKKKDEVLE 113 (188)
T ss_dssp -TEEEEEEEEEEEEESCEESC----CCS-EETTEEEEEEEGGGGGG
T ss_pred -CcceEEEEEEEEEEECCCCC----CcC-CCCCEeEEEEEHHHhhh
Confidence 11112235667766543322 122 34557899999999955
No 60
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.43 E-value=6.7e-13 Score=134.48 Aligned_cols=121 Identities=19% Similarity=0.198 Sum_probs=82.5
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCC----CCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKD----SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~----~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~ 113 (757)
.+|+++++++.+++|||+++..... ..++.|++| ||++++|||+.+||+||++||||+.+. .+..++.+..
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welP-gG~ve~gE~~~~aA~REl~EEtGl~~~--~~~~l~~~~~-- 132 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV-AGMIEEGESVEDVARREAIEEAGLIVK--RTKPVLSFLA-- 132 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECE-EEECCTTCCHHHHHHHHHHHHHCCCCC--CEEEEEEEES--
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeC-cccCCCCcCHHHHHHHHHHHHcCcccC--cEEEeEEEec--
Confidence 4788888884468898865432211 125789998 999999999999999999999999863 5777776532
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCc-cccCCccccccEEEEcHHHHHHHHhcC
Q 004387 114 VINDGKFINNEFADVYLVTTLNPIPLE-AFTLQQTEVSAVKYIAYEEYKNLLAKD 167 (757)
Q Consensus 114 ~~~~g~~~~~ei~~vy~~~~~~~~~~~-~i~~~~~Ev~e~~Wvs~~EL~~~l~~~ 167 (757)
.++. ..+..++|.+......... ....+++|+.++.|++++++.+++..+
T Consensus 133 -~~g~---~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 133 -SPGG---TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp -CTTT---BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred -CCCc---cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 1211 2346788888753211101 113466788899999999999988754
No 61
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.43 E-value=1.7e-13 Score=138.23 Aligned_cols=112 Identities=18% Similarity=0.284 Sum_probs=79.2
Q ss_pred eeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeec
Q 004387 36 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 115 (757)
Q Consensus 36 ~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~ 115 (757)
.+.++.++|++ +|+|||+||.. +|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+......
T Consensus 67 ~~~~v~~vv~~--~~~vLLv~r~~-----~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~v~~--~~~l~~~~~~~~~ 136 (205)
T 3q1p_A 67 PKVDIRAVVFQ--NEKLLFVKEKS-----DGKWALP-GGWADVGYTPTEVAAKEVFEETGYEVDH--FKLLAIFDKEKHQ 136 (205)
T ss_dssp CEEEEEEEEEE--TTEEEEEEC--------CCEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEHHHHS
T ss_pred CcceEEEEEEE--CCEEEEEEEcC-----CCcEECC-cCccCCCCCHHHHHHHHHHHHHCCcccc--ceEEEEEeccccC
Confidence 34667778887 68999999863 6899998 9999999999999999999999998653 3444444332111
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 116 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 116 ~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
......+.+..+|.+....+. +..+ +|+.+++|++++++.++
T Consensus 137 -~~~~~~~~~~~~~~~~~~~~~----~~~~-~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 137 -PSPSATHVYKIFIGCEIIGGE----KKTS-IETEEVEFFGENELPNL 178 (205)
T ss_dssp -CCCCSSCEEEEEEEEEEEEEC----CCCC-TTSCCEEEECTTSCCCB
T ss_pred -CCCCCceEEEEEEEEEecCCc----cCCC-CcceEEEEEeHHHhhhc
Confidence 111124556677777764432 2344 79999999999999654
No 62
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.43 E-value=1.9e-14 Score=132.67 Aligned_cols=108 Identities=20% Similarity=0.255 Sum_probs=76.4
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
+.++.+ +++ .++++||+||+.. ..++|.|++| ||++++|||+.+||+||++||||+.+.. +..++.+.+. .+
T Consensus 5 ~~~~~i-i~~-~~~~vLl~~r~~~-~~~~g~w~~P-gG~~e~gE~~~~aa~RE~~EE~G~~~~~--~~~~~~~~~~--~~ 76 (129)
T 1mut_A 5 QIAVGI-IRN-ENNEIFITRRAAD-AHMANKLEFP-GGKIEMGETPEQAVVRELQEEVGITPQH--FSLFEKLEYE--FP 76 (129)
T ss_dssp ECCCEE-CEE-TTTEEEEEECSSC-CSSSCCEECC-CCCSSSCSSTTHHHHHHHHTTTCCSSCE--ECCCCCCBCC--CS
T ss_pred EEEEEE-EEe-cCCEEEEEEeCCC-CCCCCeEECC-ccCcCCCCCHHHHHHHHHHHHhCCcccc--ceEEEEEEEe--cC
Confidence 334444 445 4789999999876 3789999998 9999999999999999999999998643 2233322221 11
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
. .+...++|.+..... .++++|+.+++|++++++.+
T Consensus 77 ~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~ 112 (129)
T 1mut_A 77 D----RHITLWFWLVERWEG------EPWGKEGQPGEWMSLVGLNA 112 (129)
T ss_dssp S----CEEECCCEEEEECSS------CCCCCSSCCCEEEESSSCCT
T ss_pred C----ceEEEEEEEEEccCC------ccCCcccceeEEeCHHHccc
Confidence 1 233456777765432 23456888999999999955
No 63
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.41 E-value=1.5e-12 Score=141.58 Aligned_cols=121 Identities=19% Similarity=0.233 Sum_probs=84.1
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceE--EEEEEEe
Q 004387 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFE--FVFTFLQ 111 (757)
Q Consensus 34 g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~--~v~~~~~ 111 (757)
...+.++.++|++ +++|||++|...+ .+|.|.+| ||++++|||+++||+||++||||+++....+. ......+
T Consensus 205 ~~~~~~v~~vv~~--~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~ 279 (352)
T 2qjt_B 205 KPNFVTVDALVIV--NDHILMVQRKAHP--GKDLWALP-GGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVF 279 (352)
T ss_dssp CCEEEEEEEEEEE--TTEEEEEEESSSS--STTCEECS-EEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEE
T ss_pred CCCceEEEEEEEE--CCEEEEEEEcCCC--CCCeEECC-CCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEe
Confidence 3467788888886 7899999997643 47999998 99999999999999999999999987532221 1122222
Q ss_pred eeecCCCcccceEEEEEEEEEEeCCCCCcccc-CCccccccEEEEcH-HHHHHH
Q 004387 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFT-LQQTEVSAVKYIAY-EEYKNL 163 (757)
Q Consensus 112 ~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~-~~~~Ev~e~~Wvs~-~EL~~~ 163 (757)
.. +......+.+.++|.+.+..+.. ... ..++|+.+++|+++ +++.++
T Consensus 280 ~~--~~~~~~~~~~~~~f~~~~~~~~~--~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 280 DY--PDRSVRGRTISHVGLFVFDQWPS--LPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp CC--TTSCTTSEEEEEEEEEEECSCSS--CCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred cC--CCCCCCccEEEEEEEEEEeCCCC--CCccCCCccceEEEEecHHHHHHhh
Confidence 11 11111134566778777644321 012 34579999999999 999874
No 64
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.41 E-value=9.8e-13 Score=132.84 Aligned_cols=110 Identities=19% Similarity=0.282 Sum_probs=78.5
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecC
Q 004387 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 37 hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~ 116 (757)
+.++.++|++ +|+|||+||. +|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.....
T Consensus 70 ~~~v~~vv~~--~~~vLLvrr~------~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~l~~~~~~~~~~ 138 (206)
T 3o8s_A 70 KLDTRAAIFQ--EDKILLVQEN------DGLWSLP-GGWCDVDQSVKDNVVKEVKEEAGLDVEA--QRVVAILDKHKNNP 138 (206)
T ss_dssp EEEEEEEEEE--TTEEEEEECT------TSCEECS-EEECCTTSCHHHHHHHHHHHHHCEEEEE--EEEEEEEEHHHHCC
T ss_pred CccEEEEEEE--CCEEEEEEec------CCeEECC-eeccCCCCCHHHHHHHHHHHHHCCccee--eeEEEEEeccccCC
Confidence 4677778887 5899999987 5899998 9999999999999999999999998643 44455443221111
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
+....+.+..+|.+....+. +..+ +|+.+++|++++++.++
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~----~~~~-~E~~~~~w~~~~el~~l 179 (206)
T 3o8s_A 139 -AKSAHRVTKVFILCRLLGGE----FQPN-SETVASGFFSLDDLPPL 179 (206)
T ss_dssp ------CEEEEEEEEEEEEEC----CCCC-SSCSEEEEECTTSCCCB
T ss_pred -CCCCceEEEEEEEEEecCCe----ecCC-CCceEEEEEeHHHhhhc
Confidence 11123455677777764432 2333 79999999999999654
No 65
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.38 E-value=1.4e-12 Score=140.95 Aligned_cols=119 Identities=13% Similarity=0.171 Sum_probs=79.0
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCce----EEEEEE
Q 004387 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF----EFVFTF 109 (757)
Q Consensus 34 g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L----~~v~~~ 109 (757)
...+.++.++|++ +++|||++|... .++|.|.+| ||++++|||+.+||+||++||||+.+....+ .....+
T Consensus 200 ~~~~~~v~~vi~~--~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 274 (341)
T 2qjo_A 200 APTFITTDAVVVQ--AGHVLMVRRQAK--PGLGLIALP-GGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVF 274 (341)
T ss_dssp CCCEEEEEEEEEE--TTEEEEEECCSS--SSTTCEECS-EEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEE
T ss_pred CCCceEEEEEEEe--CCEEEEEEecCC--CCCCeEECC-CCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEE
Confidence 3456788888886 789999999764 348999998 9999999999999999999999998753222 122223
Q ss_pred EeeeecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 110 LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 110 ~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
.+ +......+.+.++|.+....+.. ....+++|+.+++|++++++.++
T Consensus 275 ~~----~~~~~~~~~~~~~f~~~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 275 DA----PGRSLRGRTITHAYFIQLPGGEL--PAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp CC----TTSCTTSCEEEEEEEEECCSSSC--CCCC------CEEEEEHHHHHHT
T ss_pred eC----CCCCCCCcEEEEEEEEEecCCCc--CccCCCCceeeEEEeeHHHHhhh
Confidence 22 11111124566778777643321 01245689999999999999874
No 66
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.37 E-value=3e-12 Score=124.64 Aligned_cols=97 Identities=20% Similarity=0.337 Sum_probs=67.8
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeee
Q 004387 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (757)
Q Consensus 34 g~~hrav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~ 113 (757)
.....++.+++.+ ++++||++|. +|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.
T Consensus 13 ~~~~~~~~~ii~~--~~~vLL~~r~------~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~l~~~~~~- 80 (163)
T 3f13_A 13 SDLARRATAIIEM--PDGVLVTASR------GGRYNLP-GGKANRGELRSQALIREIREETGLRINS--MLYLFDHITP- 80 (163)
T ss_dssp SSCEEEEEEECEE--TTEEEEEECC---------BBCS-EEECCTTCCHHHHHHHHHHHHHCCCCCE--EEEEEEEECS-
T ss_pred CCceEEEEEEEEe--CCEEEEEEEC------CCeEECC-ceeCCCCCCHHHHHHHHHHHHHCcccce--eEEEEEEecC-
Confidence 3344556666655 6889999875 4899998 9999999999999999999999998643 4555544321
Q ss_pred ecCCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcH
Q 004387 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAY 157 (757)
Q Consensus 114 ~~~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~ 157 (757)
....++|.+... + .+.++ +|+.+++|++.
T Consensus 81 ---------~~~~~~f~~~~~-~----~~~~~-~E~~~~~W~~~ 109 (163)
T 3f13_A 81 ---------FNAHKVYLCIAQ-G----QPKPQ-NEIERIALVSS 109 (163)
T ss_dssp ---------SEEEEEEEEEC--C----CCCCC-TTCCEEEEESS
T ss_pred ---------CeEEEEEEEEEC-C----cCccC-CCceEEEEECc
Confidence 145677777643 2 12444 49999999993
No 67
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.35 E-value=5.2e-12 Score=121.26 Aligned_cols=55 Identities=20% Similarity=0.408 Sum_probs=48.1
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPK 100 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~ 100 (757)
.+++++|++ +++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+..
T Consensus 2 ~~~~~vi~~--~~~vLL~~r~~-----~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 2 IVTSGVLVE--NGKVLLVKHKR-----LGVYIYP-GGHVEHNETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp EEEEEECEE--TTEEEEEECTT-----TCSEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE
T ss_pred eEEEEEEEE--CCEEEEEEEcC-----CCcEECC-eeecCCCCCHHHHHHHHHHHHHCCccee
Confidence 457777777 78999999864 5899998 9999999999999999999999998653
No 68
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.33 E-value=2.8e-12 Score=122.83 Aligned_cols=99 Identities=15% Similarity=0.231 Sum_probs=70.6
Q ss_pred CCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHH-HHHHHHHHHHhC-CccCCCceEEEEEEEeeeecCCCcccceEEE
Q 004387 49 TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL-ISAQRELQEELG-INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126 (757)
Q Consensus 49 ~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~-eAAiREl~EEtG-I~v~~~~L~~v~~~~~~~~~~~g~~~~~ei~ 126 (757)
+|+|||+||... ..++|+|++| ||++++|||+. +||+||+.|||| +.+.. +..++.+.+ ..+. .+...
T Consensus 33 ~~~vLl~~R~~~-~~~~g~w~~P-gG~~e~gE~~~~~a~~REl~EE~g~l~~~~--~~~l~~~~~--~~~~----~~~~~ 102 (155)
T 1x51_A 33 GAQILLVQRPNS-GLLAGLWEFP-SVTWEPSEQLQRKALLQELQRWAGPLPATH--LRHLGEVVH--TFSH----IKLTY 102 (155)
T ss_dssp SEEEEEEECCCC-STTCSCEECC-EEECCSSHHHHHHHHHHHHHHHSCCCCSTT--CEECCCBCC--BCSS----CEEEE
T ss_pred CCEEEEEECCCC-CCCCceecCC-ccccCCCCCHHHHHHHHHHHHHhCCcceee--eeecceEEE--ecCC----ccEEE
Confidence 478999999764 5789999998 99999999996 999999999999 77532 334433322 1111 12345
Q ss_pred EEEEEEEeCCCCCccccCCccccccEEEEcHHHHHHH
Q 004387 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (757)
Q Consensus 127 ~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~ 163 (757)
++|.+..... .+...|..+++|++++++.++
T Consensus 103 ~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 103 QVYGLALEGQ------TPVTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp EEEEEECSSC------CCCCCCCTTEEEEEHHHHHHS
T ss_pred EEEEEEEcCC------CCCCCCCCccEEccHHHhhhc
Confidence 6777765332 123357788999999999763
No 69
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.31 E-value=1.9e-12 Score=136.48 Aligned_cols=111 Identities=17% Similarity=0.255 Sum_probs=73.6
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~ 117 (757)
.+++++|++..+|+|||++|... +|.|.+| ||++++|||+.+||+||++||||+++.. +..+..+. ....
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~~----~g~W~lP-gG~ve~gEs~~eAA~REl~EEtGl~~~~--l~~~~~~~--~~~~- 171 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWKA----SSGWGFP-KGKIDKDESDVDCAIREVYEETGFDCSS--RINPNEFI--DMTI- 171 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESST----TCCCBCS-EEECCTTCCHHHHHHHHHHHHHCCCCTT--TCCTTCEE--EEEE-
T ss_pred CeEEEEEEECCCCEEEEEEEeCC----CCeEECC-cccCCCCcCHHHHHHHHHHHHhCCCcee--eeeeeeec--cCCc-
Confidence 35677777743589999998652 6899998 9999999999999999999999998753 22221111 1000
Q ss_pred CcccceEEEEEEEEEEeCCCCCccccC-CccccccEEEEcHHHHHHHH
Q 004387 118 GKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 118 g~~~~~ei~~vy~~~~~~~~~~~~i~~-~~~Ev~e~~Wvs~~EL~~~l 164 (757)
.....++|.+...... ..+.+ +++|+.+++|++++++.++.
T Consensus 172 ----~~~~~~~f~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~ 213 (271)
T 2a6t_A 172 ----RGQNVRLYIIPGISLD--TRFESRTRKEISKIEWHNLMDLPTFK 213 (271)
T ss_dssp ----TTEEEEEEEECCCCTT--CCCC------EEEEEEEEGGGSTTCC
T ss_pred ----CCceEEEEEEEEecCc--ccCCCCCccceeEEEEEEHHHHHHHH
Confidence 1234567766543211 11232 56799999999999997754
No 70
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.31 E-value=4.6e-12 Score=128.39 Aligned_cols=118 Identities=19% Similarity=0.093 Sum_probs=77.0
Q ss_pred EEEEEEEEecCC---CEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeee
Q 004387 38 RTVNAWIFAEST---QELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 114 (757)
Q Consensus 38 rav~viV~n~~~---g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~ 114 (757)
.+|+|+.+...+ ++|||+++... ...++.|++| ||++++|||+.+||+||++||||+.+.. +..++.+..
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~-~~~~~~welP-gG~ve~gEs~~~aA~REl~EEtGl~~~~--~~~l~~~~~--- 134 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRP-PMGGYCIEFP-AGLIDDGETPEAAALRELEEETGYKGDI--AECSPAVCM--- 134 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEG-GGTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCCCCEE--EEECCCEES---
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecC-CCCCcEEECC-ccccCCCCCHHHHHHHHHHHHhCCCccc--eEEeccEEc---
Confidence 355555443222 47888764322 1346799998 9999999999999999999999998542 333333211
Q ss_pred cCCCcccceEEEEEEEEEEeCCCCC---ccccCCccccccEEEEcHHHHHHHHh
Q 004387 115 INDGKFINNEFADVYLVTTLNPIPL---EAFTLQQTEVSAVKYIAYEEYKNLLA 165 (757)
Q Consensus 115 ~~~g~~~~~ei~~vy~~~~~~~~~~---~~i~~~~~Ev~e~~Wvs~~EL~~~l~ 165 (757)
..+ + .++..++|++.+...... ....++++|+.++.|++++++.+++.
T Consensus 135 -~~~-~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 135 -DPG-L-SNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp -CTT-T-BCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred -CCC-c-cCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 111 1 234567787775432110 02345678999999999999988765
No 71
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.27 E-value=5e-12 Score=128.37 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=82.4
Q ss_pred cccccccccccCCceeEEEEEEEEec----------CCCEEEEEEeCCCCCCCCCCeeeccccccCCCC-CHHHHHHHHH
Q 004387 22 GITKPRSEVHRVGDYHRTVNAWIFAE----------STQELLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQREL 90 (757)
Q Consensus 22 G~~~~R~~~h~~g~~hrav~viV~n~----------~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GE-t~~eAAiREl 90 (757)
|...++...+..+..+.+++++++.+ .+++|||++| ++|.|++| ||++++|| |+.+||+||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r------~~g~w~~P-GG~ve~gE~t~~~aa~REl 90 (212)
T 1u20_A 18 PRNISREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMR------FDGRLGFP-GGFVDTRDISLEEGLKREL 90 (212)
T ss_dssp SEECCHHHHHSCSSCEEEEEEEEEEECCCEETTTEECCEEEEEEEE------TTSCEECS-EEEECTTTSCHHHHHHHHH
T ss_pred cccCCHHHHhhcCCCcccceEEEeCCCceEEEEEEecCCEEEEEEe------CCCeEECC-CcccCCCCCCHHHHHHHHH
Confidence 33334444444344455555555432 3568999988 36999998 99999999 9999999999
Q ss_pred HHHhCCccCCCce---EEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCC------ccccCCccccccEEEEcHHHHH
Q 004387 91 QEELGINLPKDAF---EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL------EAFTLQQTEVSAVKYIAYEEYK 161 (757)
Q Consensus 91 ~EEtGI~v~~~~L---~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~------~~i~~~~~Ev~e~~Wvs~~EL~ 161 (757)
+||||+.+....+ ..++.+.+.. + .+...++|.+....+... .....+++|+.++.|++++++.
T Consensus 91 ~EEtGl~~~~~~l~~~~~~~~~~~~~--~-----~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~ 163 (212)
T 1u20_A 91 EEELGPALATVEVTEDDYRSSQVREH--P-----QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLR 163 (212)
T ss_dssp HHHHCGGGGGCCCCGGGEEEEEEECT--T-----SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCT
T ss_pred HHHHCCCccccceeeeeEEEeccccC--C-----CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhh
Confidence 9999998764332 2444443321 1 245678888875322110 0012245688999999999985
Q ss_pred H
Q 004387 162 N 162 (757)
Q Consensus 162 ~ 162 (757)
+
T Consensus 164 ~ 164 (212)
T 1u20_A 164 D 164 (212)
T ss_dssp T
T ss_pred h
Confidence 4
No 72
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.20 E-value=3.8e-11 Score=131.57 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=70.5
Q ss_pred CCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCCCcc--------
Q 004387 49 TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF-------- 120 (757)
Q Consensus 49 ~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~g~~-------- 120 (757)
+.+|||++|.. .|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+..... +..
T Consensus 37 ~~~vLLv~r~~-----~g~W~lP-gG~ve~gEs~~~AA~REl~EEtGl~~~~--~~~l~~~~~~~~~~-g~~~~~~~~~~ 107 (364)
T 3fjy_A 37 SIEVCIVHRPK-----YDDWSWP-KGKLEQNETHRHAAVREIGEETGSPVKL--GPYLCEVEYPLSEE-GKKTRHSHDCT 107 (364)
T ss_dssp TEEEEEEEETT-----TTEEECC-EEECCTTCCHHHHHHHHHHHHHSCCEEE--EEEEEEEC------------------
T ss_pred ceEEEEEEcCC-----CCCEECC-cCCCCCCCCHHHHHHHHHHHHhCCeeee--ccccceEEEeccCC-Ccccccccccc
Confidence 34899999854 3899998 9999999999999999999999998754 33444433322111 100
Q ss_pred cceEEEEEEEEEEeCCCC--------CccccCCccccccEEEEcHHHHHHHH
Q 004387 121 INNEFADVYLVTTLNPIP--------LEAFTLQQTEVSAVKYIAYEEYKNLL 164 (757)
Q Consensus 121 ~~~ei~~vy~~~~~~~~~--------~~~i~~~~~Ev~e~~Wvs~~EL~~~l 164 (757)
..+..+++|.+....+.. .....++++|+.+++|++++++.+++
T Consensus 108 ~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~ 159 (364)
T 3fjy_A 108 ADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKIL 159 (364)
T ss_dssp ----CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHC
T ss_pred cCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHh
Confidence 013456777776643310 00113566899999999999998764
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.18 E-value=1.2e-10 Score=119.73 Aligned_cols=124 Identities=17% Similarity=0.212 Sum_probs=84.3
Q ss_pred EEEEEEEEecC-CC--EEEEEEeCCCCCCCCCCeeeccccccCCCCC--------------------HHHHHHHHHHHHh
Q 004387 38 RTVNAWIFAES-TQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDS--------------------SLISAQRELQEEL 94 (757)
Q Consensus 38 rav~viV~n~~-~g--~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt--------------------~~eAAiREl~EEt 94 (757)
.++.++++.+. +| +|||+||+.....+||.|.|| ||++++||+ +..||+||++|||
T Consensus 9 ~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~ 87 (232)
T 3qsj_A 9 KAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEI 87 (232)
T ss_dssp EEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHh
Confidence 34444444422 33 899999998877789999998 999999997 5899999999999
Q ss_pred CCccCC----------------------------------------CceEEEEEEEeeeecCCCcccceEEEEEEEEEEe
Q 004387 95 GINLPK----------------------------------------DAFEFVFTFLQQNVINDGKFINNEFADVYLVTTL 134 (757)
Q Consensus 95 GI~v~~----------------------------------------~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~ 134 (757)
||.+.. ..|.....+.. +.+ ...+.-.++|.+.+.
T Consensus 88 Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiT----P~~-~~rRfdT~FFla~lp 162 (232)
T 3qsj_A 88 GWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVT----PPT-QPVRFDTRFFLCVGQ 162 (232)
T ss_dssp SCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEEC----CTT-SSSEEEEEEEEEECS
T ss_pred CceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcC----CcC-CceeEEEEEEEEECC
Confidence 997421 01222222221 111 123445677776654
Q ss_pred CCCCCccccCCccccccEEEEcHHHHHHHHhcCCCC
Q 004387 135 NPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170 (757)
Q Consensus 135 ~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~~l~~~~~~ 170 (757)
..+ .+..+.+|+.++.|+++.++.+....+...
T Consensus 163 -q~~--~v~~d~~E~~~~~W~~p~eal~~~~~G~i~ 195 (232)
T 3qsj_A 163 -HLG--EPRLHGAELDAALWTPARDMLTRIQSGELP 195 (232)
T ss_dssp -SCC--CCCCCSSSEEEEEEEEHHHHHHHHHTTSSC
T ss_pred -CCC--CCCCCCCceEEEEEEcHHHHHHHHHcCCce
Confidence 211 124577899999999999999888765443
No 74
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.12 E-value=1.8e-10 Score=126.50 Aligned_cols=104 Identities=10% Similarity=0.141 Sum_probs=75.0
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccCCCceEEEEEEEeeeecCC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~~~~L~~v~~~~~~~~~~~ 117 (757)
.++.++|++ .+|+|||+||... ..++|+|++| ||++++| |+++|++||+.||||+.+.... .++.+.+. .+.
T Consensus 241 ~~~~~vi~~-~~g~vLL~rR~~~-g~~~GlWefP-GG~ve~g-t~~~al~REl~EE~Gl~v~~~~--~l~~~~h~--~~h 312 (369)
T 3fsp_A 241 PLAVAVLAD-DEGRVLIRKRDST-GLLANLWEFP-SCETDGA-DGKEKLEQMVGEQYGLQVELTE--PIVSFEHA--FSH 312 (369)
T ss_dssp EEEEEEEEC-SSSEEEEEECCSS-STTTTCEECC-EEECSSS-CTHHHHHHHHTTSSSCCEEECC--CCCEEEEE--CSS
T ss_pred EEEEEEEEe-CCCEEEEEECCCC-CCcCCcccCC-CcccCCC-CcHHHHHHHHHHHhCCceeeec--ccccEEEE--cce
Confidence 345555665 4789999999864 5789999999 9999999 9999999999999999865433 22222221 111
Q ss_pred CcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 118 g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
.+...++|.+....+ ..|..+++|++++++.+
T Consensus 313 ----~~~~~~~~~~~~~~~---------~~e~~~~~Wv~~~el~~ 344 (369)
T 3fsp_A 313 ----LVWQLTVFPGRLVHG---------GPVEEPYRLAPEDELKA 344 (369)
T ss_dssp ----EEEEEEEEEEEECCS---------SCCCTTEEEEEGGGGGG
T ss_pred ----EEEEEEEEEEEEcCC---------CCCccccEEeeHHHhhh
Confidence 233456777765321 35788999999999965
No 75
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.02 E-value=1.1e-09 Score=116.65 Aligned_cols=105 Identities=13% Similarity=0.127 Sum_probs=64.6
Q ss_pred EEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccC------------CCceE---EEEEEEeeeec
Q 004387 51 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP------------KDAFE---FVFTFLQQNVI 115 (757)
Q Consensus 51 ~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~------------~~~L~---~v~~~~~~~~~ 115 (757)
++||++|.. .|.|.+| ||++++|||+.+||+||++||||+.+. ...+. ....+......
T Consensus 140 ~vLl~~r~~-----~g~W~lP-GG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~d 213 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIP-GGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDD 213 (292)
T ss_dssp EEEEEECTT-----TCSEECC-CEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCC
T ss_pred EEEEEEecC-----CCcEeCC-CcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccC
Confidence 699999865 3899998 999999999999999999999999731 11121 11111111111
Q ss_pred CCCcccceEEEEEEEEEEeCCCCCccc-cCCccccccEEEEcHHHHH
Q 004387 116 NDGKFINNEFADVYLVTTLNPIPLEAF-TLQQTEVSAVKYIAYEEYK 161 (757)
Q Consensus 116 ~~g~~~~~ei~~vy~~~~~~~~~~~~i-~~~~~Ev~e~~Wvs~~EL~ 161 (757)
+...-..+.+..+|.+....+...... ....+|+.+++|++++++.
T Consensus 214 pr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~ 260 (292)
T 1q33_A 214 PRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKL 260 (292)
T ss_dssp TTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTC
T ss_pred CCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCc
Confidence 111001133455665554322111111 2345789999999999984
No 76
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.86 E-value=1.2e-09 Score=111.36 Aligned_cols=97 Identities=19% Similarity=0.149 Sum_probs=64.3
Q ss_pred CEEEEEEeCCCCCCCCCCeeeccccccCCCC-CHHHHHHHHHHHHhCCccCCCce---EEEEEEEeeeecCCCcccceEE
Q 004387 50 QELLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQEELGINLPKDAF---EFVFTFLQQNVINDGKFINNEF 125 (757)
Q Consensus 50 g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GE-t~~eAAiREl~EEtGI~v~~~~L---~~v~~~~~~~~~~~g~~~~~ei 125 (757)
+++||+.|. +|.|++| ||++++|| |+.+||+||++||||+.+....+ ..++.... . ..+.+
T Consensus 65 ~~~ll~~r~------~g~w~lP-GG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~----~----~~~~~ 129 (217)
T 2xsq_A 65 YAILMQMRF------DGRLGFP-GGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVG----S----GPRVV 129 (217)
T ss_dssp EEEEEEEET------TSCEECS-EEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEC----S----SSSEE
T ss_pred CcEEEEEcc------CCeEECC-ceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCC----C----CCeEE
Confidence 356776664 5899998 99999999 99999999999999998753222 22222211 0 12456
Q ss_pred EEEEEEEEeCCCC--C--c--cccCCccccccEEEEcHHHHH
Q 004387 126 ADVYLVTTLNPIP--L--E--AFTLQQTEVSAVKYIAYEEYK 161 (757)
Q Consensus 126 ~~vy~~~~~~~~~--~--~--~i~~~~~Ev~e~~Wvs~~EL~ 161 (757)
.++|.+.+..... . . ......+|+.++.|+|++++.
T Consensus 130 ~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 130 AHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp EEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred EEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 6777776532110 0 0 002234688999999999985
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.48 E-value=1e-07 Score=93.76 Aligned_cols=120 Identities=19% Similarity=0.235 Sum_probs=74.9
Q ss_pred ccccccccCC-ceeEEEEEEEEecCCCE----------EEEEEeCCCCCCCCCCeeeccccccCCCC-CHHHHHHHHHHH
Q 004387 25 KPRSEVHRVG-DYHRTVNAWIFAESTQE----------LLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQE 92 (757)
Q Consensus 25 ~~R~~~h~~g-~~hrav~viV~n~~~g~----------ILL~rRs~~k~~~pG~W~lPvGG~ve~GE-t~~eAAiREl~E 92 (757)
.+|.++-..| -+..+++++++.++.++ |||+.|- .|.|++| ||+||+|| |+++|+.||+.|
T Consensus 8 i~~~eal~~~~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~------~G~weFP-GGkVe~gE~t~e~aL~REl~E 80 (214)
T 3kvh_A 8 ISRVEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRF------DGLLGFP-GGFVDRRFWSLEDGLNRVLGL 80 (214)
T ss_dssp ECHHHHTTSCTTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEET------TSCEECS-EEEECTTTCCHHHHHHHSCCS
T ss_pred cCHHHHHhhccCccEeeEEEEEcCCccccccccchhheEEEeeee------CCEEeCC-CccCCCCCCCHHHHHHHHHHH
Confidence 3466665553 47778999998863232 7788764 4999999 99999999 999999999999
Q ss_pred HhCC-ccCCCceEEEEEEEeeeecCCCcccceEEEEEEEEEEeCCCCC----ccccCC--ccccccEEEEcHHHH
Q 004387 93 ELGI-NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL----EAFTLQ--QTEVSAVKYIAYEEY 160 (757)
Q Consensus 93 EtGI-~v~~~~L~~v~~~~~~~~~~~g~~~~~ei~~vy~~~~~~~~~~----~~i~~~--~~Ev~e~~Wvs~~EL 160 (757)
|+|+ .+...+ .+.+..+.. + .+...++|.+++..+.+. ...... --|+-+..-||+=.+
T Consensus 81 Elg~~~V~~~~--y~~s~~~~y--p-----~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl 146 (214)
T 3kvh_A 81 GLGCLRLTEAD--YLSSHLTEG--P-----HRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQ 146 (214)
T ss_dssp CC---CCCGGG--EEEEEEC-----------CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBC
T ss_pred hhCCeeeeeee--eEEEEeccC--C-----CEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEe
Confidence 9997 444333 333333221 1 134678888876432110 001111 147777777777555
No 78
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.39 E-value=5.3e-07 Score=96.99 Aligned_cols=91 Identities=12% Similarity=0.162 Sum_probs=60.1
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHh-CCccCCCceEEEEEEEeeeecC
Q 004387 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEEL-GINLPKDAFEFVFTFLQQNVIN 116 (757)
Q Consensus 38 rav~viV~n~~~g~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEt-GI~v~~~~L~~v~~~~~~~~~~ 116 (757)
.+|++++.+ +|+|||+ .. .| |.+| ||.++.++ .++|+||++||| |+.+....|.. .|.. +
T Consensus 184 ~~vgaii~~--~g~vLL~--~~-----~G-W~LP-G~~~~~~~--~~~a~RE~~EEttGl~v~~~~L~~--v~~~----~ 244 (321)
T 3rh7_A 184 IRLGAVLEQ--QGAVFLA--GN-----ET-LSLP-NCTVEGGD--PARTLAAYLEQLTGLNVTIGFLYS--VYED----K 244 (321)
T ss_dssp EEEEEEEES--SSCEEEB--CS-----SE-EBCC-EEEESSSC--HHHHHHHHHHHHHSSCEEEEEEEE--EEEC----T
T ss_pred ceEEEEEEE--CCEEEEe--eC-----CC-ccCC-cccCCCCh--hHHHHHHHHHHhcCCEEeeceEEE--EEEc----C
Confidence 567777776 6899999 21 48 9999 88765444 469999999997 99976432222 2221 1
Q ss_pred CCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHHH
Q 004387 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (757)
Q Consensus 117 ~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~~ 162 (757)
. .+....+|.++..++ +..+++|+++++|+.
T Consensus 245 ~----~~~~~i~f~~~~~~g-----------~~~e~~~f~~~elp~ 275 (321)
T 3rh7_A 245 S----DGRQNIVYHALASDG-----------APRQGRFLRPAELAA 275 (321)
T ss_dssp T----TCCEEEEEEEEECSS-----------CCSSSEEECHHHHTT
T ss_pred C----CceEEEEEEEEeCCC-----------CeeeeEEECHHHCCC
Confidence 1 122345777766432 136789999999943
No 79
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.26 E-value=4.9e-06 Score=82.85 Aligned_cols=117 Identities=15% Similarity=0.168 Sum_probs=73.2
Q ss_pred cCCceeEEEEEEEEecCCC--EEEEEEeCCCCCCCCCCeeeccccccCCCCCHHHHHHHHHHHHhCCccC----CCceEE
Q 004387 32 RVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP----KDAFEF 105 (757)
Q Consensus 32 ~~g~~hrav~viV~n~~~g--~ILL~rRs~~k~~~pG~W~lPvGG~ve~GEt~~eAAiREl~EEtGI~v~----~~~L~~ 105 (757)
..|++..+.++++++. .+ +|||.|+.. +.|.+| ||.+++||++.+|+.||+.||+|+.-. .+--..
T Consensus 54 ~~g~R~sV~avil~~~-~~~phVLLlq~~~------~~f~LP-GGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~ 125 (208)
T 3bho_A 54 KIGMRRTVEGVLIVHE-HRLPHVLLLQLGT------TFFKLP-GGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDC 125 (208)
T ss_dssp HHCSEEEEEEEEEEEE-TTEEEEEEEEEET------TEEECS-EEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEE
T ss_pred hhCCceEEEEEEEEcC-CCCcEEEEEEcCC------CcEECC-CcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhhe
Confidence 4677777788877763 44 699998742 589998 999999999999999999999996311 111234
Q ss_pred EEEEEeeeec-------CCCcccceEEEEEEEEEEeCCCCCccccCCccccccEEEEcHHHHH
Q 004387 106 VFTFLQQNVI-------NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161 (757)
Q Consensus 106 v~~~~~~~~~-------~~g~~~~~ei~~vy~~~~~~~~~~~~i~~~~~Ev~e~~Wvs~~EL~ 161 (757)
+++|...+.. +..--.-.++..+|.+.+..... +... .-..+.-+++=||-
T Consensus 126 lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~---f~vP--kn~kL~AvPLfely 183 (208)
T 3bho_A 126 IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKAL---FAVP--KNYKLVAAPLFELY 183 (208)
T ss_dssp EEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEE---EEEE--TTCEEEEEEHHHHT
T ss_pred EEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccce---EecC--CCCeEEeecHHhhh
Confidence 5554332111 00001135788999998754321 2222 11334556777763
No 80
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=68.42 E-value=0.93 Score=43.15 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=14.3
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|++||+||.+|-.+
T Consensus 111 ~~~va~HEiGHaLGL~H 127 (159)
T 2ovx_A 111 LFLVAAHQFGHALGLDH 127 (159)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhhhhhhhhhhhhcCCC
Confidence 45899999999999644
No 81
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=66.45 E-value=1.1 Score=43.00 Aligned_cols=18 Identities=22% Similarity=0.296 Sum_probs=14.9
Q ss_pred chhhhhhhhcccCCCCCC
Q 004387 571 FFTHNICHECCHGIGPHS 588 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk~~ 588 (757)
...+|++||+||.+|-.+
T Consensus 110 ~~~~v~~HEiGHaLGL~H 127 (168)
T 1cge_A 110 NLHRVAAHELGHSLGLSH 127 (168)
T ss_dssp BHHHHHHHHHHHHTTCCC
T ss_pred chhhhhhhHhHhhhcCCC
Confidence 346999999999999644
No 82
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=65.50 E-value=1 Score=43.17 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=14.7
Q ss_pred chhhhhhhhcccCCCCCC
Q 004387 571 FFTHNICHECCHGIGPHS 588 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk~~ 588 (757)
...+|++||+||.+|-.+
T Consensus 114 ~~~~v~~HEiGHaLGL~H 131 (167)
T 2xs4_A 114 DLITVAAHEIGHLLGIEH 131 (167)
T ss_dssp EHHHHHHHHHHHHHTBCC
T ss_pred chhhhHHHHHHHhhcCCC
Confidence 445999999999999644
No 83
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=65.41 E-value=1 Score=42.66 Aligned_cols=18 Identities=22% Similarity=0.248 Sum_probs=15.0
Q ss_pred chhhhhhhhcccCCCCCC
Q 004387 571 FFTHNICHECCHGIGPHS 588 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk~~ 588 (757)
....|++||+||.+|-.+
T Consensus 107 ~~~~v~~HEiGHaLGL~H 124 (160)
T 2jsd_A 107 NLFTVAAHEFGHALGLAH 124 (160)
T ss_dssp EHHHHHHHHHHHHHTCCC
T ss_pred hhHHHHHHHhHhhhcCCC
Confidence 356999999999999644
No 84
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=64.09 E-value=1.1 Score=43.12 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=14.8
Q ss_pred chhhhhhhhcccCCCCCC
Q 004387 571 FFTHNICHECCHGIGPHS 588 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk~~ 588 (757)
...+|++||+||.+|-.+
T Consensus 112 ~~~~v~~HEiGHaLGL~H 129 (173)
T 1hy7_A 112 NLFLVAAHEIGHSLGLFH 129 (173)
T ss_dssp EHHHHHHHHHHHHHTBCC
T ss_pred hhhhhHHHHHHHhhcCCC
Confidence 346999999999999644
No 85
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=62.11 E-value=1.5 Score=41.91 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=14.9
Q ss_pred chhhhhhhhcccCCCCCC
Q 004387 571 FFTHNICHECCHGIGPHS 588 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk~~ 588 (757)
...+|++||+||.+|-.+
T Consensus 112 ~~~~v~~HEiGHaLGL~H 129 (165)
T 1hv5_A 112 DLLQVAAHEFGHVLGLQH 129 (165)
T ss_dssp EHHHHHHHHHHHHTTCCC
T ss_pred hhhhhHHHHhHhhhCCCC
Confidence 456999999999999644
No 86
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=55.36 E-value=2.2 Score=43.83 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=14.9
Q ss_pred chhhhhhhhcccCCCCCC
Q 004387 571 FFTHNICHECCHGIGPHS 588 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk~~ 588 (757)
...+|++||+||.+|-.+
T Consensus 194 ~l~~va~HEiGHaLGL~H 211 (255)
T 1slm_A 194 NLFLVAAHEIGHSLGLFH 211 (255)
T ss_dssp EHHHHHHHHHHHHTTCCC
T ss_pred eehhhhHHHHHHHhcCCC
Confidence 346999999999999644
No 87
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=51.61 E-value=2.4 Score=40.42 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=14.3
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|+.||+||.+|-.+
T Consensus 112 ~~~v~~HE~GHalGl~H 128 (163)
T 1i76_A 112 LFLVAAHEFGHSLGLAH 128 (163)
T ss_dssp HHHHHHHHHHHHHTBCC
T ss_pred hhhhhHHHhhhhhcCCC
Confidence 46999999999999643
No 88
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=50.77 E-value=2.9 Score=40.03 Aligned_cols=17 Identities=18% Similarity=0.239 Sum_probs=14.1
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|++||+||.+|-.+
T Consensus 114 ~~~~~~HE~gH~lGl~H 130 (167)
T 3ayu_A 114 LFLVAAHAFGHAMGLEH 130 (167)
T ss_dssp HHHHHHHHHHHHTTEEC
T ss_pred ceeehhhhhHHhccCCC
Confidence 45899999999999633
No 89
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=49.28 E-value=3.2 Score=39.35 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.3
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
...|+.||+||.+|-.+
T Consensus 108 ~~~~~~HE~GH~lGl~H 124 (159)
T 1y93_A 108 LFLTAVHEIGHSLGLGH 124 (159)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhhhhhhhhhhhhcCCC
Confidence 56899999999999643
No 90
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=45.79 E-value=4.7 Score=44.07 Aligned_cols=16 Identities=31% Similarity=0.578 Sum_probs=14.2
Q ss_pred chhhhhhhhcccCCCC
Q 004387 571 FFTHNICHECCHGIGP 586 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk 586 (757)
.+.+|+.||+||+.|+
T Consensus 286 ~~~~V~vHE~GHsfgg 301 (407)
T 3p1v_A 286 MFKPVVVHEFGHSFGG 301 (407)
T ss_dssp THHHHHHHHHHHHTTC
T ss_pred cccceeeeeccccccc
Confidence 4568999999999999
No 91
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=44.06 E-value=4.4 Score=39.78 Aligned_cols=16 Identities=31% Similarity=0.574 Sum_probs=13.6
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
...|++|||||.+|-.
T Consensus 136 ~a~~~AHElGH~lG~~ 151 (202)
T 2w15_A 136 VAVTMAHELGHNLGIH 151 (202)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhhcCCc
Confidence 4689999999999963
No 92
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=42.51 E-value=4.8 Score=39.60 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=13.6
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
...|++|||||.+|-.
T Consensus 138 ~a~~~AHElGH~lG~~ 153 (203)
T 1kuf_A 138 VAVTMTHELGHNLGME 153 (203)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHhhhhcCCC
Confidence 4589999999999963
No 93
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=42.44 E-value=4.1 Score=39.28 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=14.2
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|+.||+||.+|-.+
T Consensus 115 ~~~~~~HE~gH~lGl~h 131 (174)
T 2y6d_A 115 FLYAATHELGHSLGMGH 131 (174)
T ss_dssp HHHHHHHHHHHHHTBCC
T ss_pred eeehhhHHhHhhhcCCC
Confidence 46899999999999643
No 94
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=42.43 E-value=4.7 Score=38.70 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=14.1
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|+.||+||.+|-.+
T Consensus 113 l~~v~~hE~Gh~lGl~h 129 (168)
T 830c_A 113 LFLVAAHEFGHSLGLDH 129 (168)
T ss_dssp HHHHHHHHHHHHTTBCC
T ss_pred hhhhhhhhhcchhcCCC
Confidence 45899999999999643
No 95
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=41.05 E-value=4.5 Score=38.64 Aligned_cols=18 Identities=22% Similarity=0.193 Sum_probs=14.6
Q ss_pred chhhhhhhhcccCCCCCC
Q 004387 571 FFTHNICHECCHGIGPHS 588 (757)
Q Consensus 571 f~~~v~lHElgHg~Gk~~ 588 (757)
....|++||+||.+|-.+
T Consensus 116 ~~~~~~~he~gh~lgl~h 133 (169)
T 1rm8_A 116 DLFLVAVHELGHALGLEH 133 (169)
T ss_dssp EHHHHHHHHHHHHHTCCC
T ss_pred eeeeehhhhhhhhcCCCC
Confidence 346899999999999643
No 96
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=41.02 E-value=5.3 Score=40.72 Aligned_cols=16 Identities=25% Similarity=0.279 Sum_probs=13.5
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
...|++|||||.+|-.
T Consensus 182 ~a~~~AHElGHnlG~~ 197 (257)
T 2ddf_A 182 ADLVTTHELGHNFGAE 197 (257)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred eeeeeeeehhhhcCcc
Confidence 4578999999999963
No 97
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=40.55 E-value=5.4 Score=38.98 Aligned_cols=16 Identities=25% Similarity=0.509 Sum_probs=13.4
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
...|++|||||.+|-.
T Consensus 135 ~a~~~AHElGH~lG~~ 150 (197)
T 1qua_A 135 MAVTMAHELGHNLGMN 150 (197)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCC
Confidence 3578999999999963
No 98
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=40.40 E-value=5.4 Score=38.95 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=13.4
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
...|++|||||.+|-.
T Consensus 133 ~a~~~AHElGH~lG~~ 148 (197)
T 1bud_A 133 VAITLAHEMAHNLGVS 148 (197)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhhcCCc
Confidence 3578999999999963
No 99
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=40.22 E-value=5.3 Score=39.24 Aligned_cols=15 Identities=27% Similarity=0.452 Sum_probs=12.8
Q ss_pred hhhhhhhcccCCCCC
Q 004387 573 THNICHECCHGIGPH 587 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~ 587 (757)
..|++|||||.+|-.
T Consensus 137 a~~~AHElGHnlG~~ 151 (202)
T 1atl_A 137 GVTMAHELGHNLGME 151 (202)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred EEEehhhhccccCce
Confidence 468999999999963
No 100
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=40.04 E-value=5.5 Score=39.08 Aligned_cols=15 Identities=27% Similarity=0.379 Sum_probs=12.9
Q ss_pred hhhhhhhcccCCCCC
Q 004387 573 THNICHECCHGIGPH 587 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~ 587 (757)
..|+.|||||.+|-.
T Consensus 136 a~~~AHElGH~lG~~ 150 (202)
T 1yp1_A 136 AVVMAHELGHNLGML 150 (202)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCC
Confidence 578999999999963
No 101
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=39.97 E-value=5.6 Score=39.46 Aligned_cols=15 Identities=27% Similarity=0.437 Sum_probs=13.0
Q ss_pred hhhhhhhcccCCCCC
Q 004387 573 THNICHECCHGIGPH 587 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~ 587 (757)
..|++|||||.+|-.
T Consensus 142 a~~~AHElGHnlG~~ 156 (217)
T 3b8z_A 142 AFTVAHEIGHLLGLS 156 (217)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred hhhhHhhhhhhcCCc
Confidence 578999999999963
No 102
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=39.60 E-value=5 Score=44.97 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=14.0
Q ss_pred hhhhhhhcccCCCCCC
Q 004387 573 THNICHECCHGIGPHS 588 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~ 588 (757)
.+|++||+||.+|-.|
T Consensus 171 ~~va~HEiGHaLGL~H 186 (471)
T 1sat_A 171 RQTFTHEIGHALGLSH 186 (471)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred ceeeeeeccccccCCC
Confidence 5899999999999654
No 103
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase, hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4 NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A* 2c6n_A* 2c6f_A*
Probab=39.56 E-value=28 Score=40.32 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=34.9
Q ss_pred hhhhhhhcccCCCCCCcccCCcccccccchhhc-ccchHHhHHHHHHHHHHH--HHHHhcCCCCh
Q 004387 573 THNICHECCHGIGPHSITLPDGRQSTVRLELQE-LHSAMEEAKADIVGLWAL--KFLIGRDLLPK 634 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~~~~~~g~~~t~~~~~~~-~~s~~EE~rAd~vglyl~--~~ll~~G~~~~ 634 (757)
+.|+.||+||--.- +. - +.+. -.|.+ ...+++|+=+|+++|-+. ++|..+|+++.
T Consensus 356 ~~t~hHEmGH~qy~---~~-y-~~~P--~~~r~~anpgfhEAige~~slS~~Tp~hL~~igLl~~ 413 (629)
T 3nxq_A 356 LSTVHHEMGHIQYY---LQ-Y-KDLP--VSLRRGANPGFHEAIGDVLALSVSTPEHLHKIGLLDR 413 (629)
T ss_dssp HHHHHHHHHHHHHH---HH-S-TTSC--GGGCSCSSHHHHHHHHHHHHHHHTSHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHHHH---HH-H-hcCC--ccccCCCCchHHHHHHHHHHHHcCCHHHHHHcCCccc
Confidence 36778999993331 00 0 0011 12333 335799999999999776 67888999754
No 104
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=39.31 E-value=5 Score=45.02 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=14.5
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|++||+||.+|-.|
T Consensus 179 ~~~va~HEIGHaLGL~H 195 (479)
T 1kap_P 179 GRQTLTHEIGHTLGLSH 195 (479)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred cceeehhhhhhhhccCC
Confidence 35999999999999655
No 105
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=38.48 E-value=6.1 Score=39.02 Aligned_cols=14 Identities=29% Similarity=0.546 Sum_probs=12.4
Q ss_pred hhhhhhhcccCCCC
Q 004387 573 THNICHECCHGIGP 586 (757)
Q Consensus 573 ~~v~lHElgHg~Gk 586 (757)
..|++|||||.+|-
T Consensus 134 a~~~AHElGH~lG~ 147 (208)
T 4dd8_A 134 ACTMAHEMGHNLGM 147 (208)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 47899999999995
No 106
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=37.89 E-value=5.5 Score=44.53 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=14.5
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|++||+||.+|-.|
T Consensus 163 ~~~va~HEiGHaLGL~H 179 (463)
T 1g9k_A 163 GRQTLTHEIGHTLGLSH 179 (463)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred chhhhhhhhhhhhccCC
Confidence 35999999999999755
No 107
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=36.74 E-value=5.8 Score=44.49 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=14.0
Q ss_pred hhhhhhhcccCCCCCC
Q 004387 573 THNICHECCHGIGPHS 588 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~ 588 (757)
.+|++||+||.+|-.+
T Consensus 183 ~~va~HEiGHaLGL~H 198 (479)
T 1k7i_A 183 RQTFTHEIGHALGLAH 198 (479)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred ccccHHHHHHhhcCCC
Confidence 5899999999999654
No 108
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=36.60 E-value=6.6 Score=38.17 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=14.0
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
...|++||+||.+|-.+
T Consensus 122 l~~v~~hE~Gh~lGl~h 138 (181)
T 3ma2_D 122 IFLVAVHELGHALGLEH 138 (181)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred eeeeehhhccccccCCc
Confidence 35799999999999643
No 109
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=35.74 E-value=7.2 Score=40.74 Aligned_cols=16 Identities=19% Similarity=0.112 Sum_probs=13.6
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
.+.|++|||||.+|-.
T Consensus 143 ~a~t~AHElGHnlG~~ 158 (300)
T 2v4b_A 143 AAFTTAHELGHVFNMP 158 (300)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred ceehhhhhhhhhcCCc
Confidence 3588999999999963
No 110
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=34.53 E-value=48 Score=27.01 Aligned_cols=46 Identities=17% Similarity=0.018 Sum_probs=32.4
Q ss_pred CceEEeecccccHHHHHHHHHHHHHHHhc-----------cCCHHHHHHHHHHHHHc
Q 004387 391 YDLYSVPYSEEYNSYLTRASELLHKAGDM-----------ASSPSLKRLLHSKADAF 436 (757)
Q Consensus 391 g~~~~~~y~g~y~~~l~~i~~~L~~A~~~-----------a~n~~q~~~L~~~~~~f 436 (757)
|..+.+--...-..+|+++...|++|.+. |+|+.|.+-|..+|.-+
T Consensus 16 gqeieidirvstgkeleralqelekalaragarnvqitisaendeqakelleliarl 72 (96)
T 2jvf_A 16 GQEIEIDIRVSTGKELERALQELEKALARAGARNVQITISAENDEQAKELLELIARL 72 (96)
T ss_dssp TEEEEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEEcccHHHHHHHHHHHHHHHhccccceEEEEEecChHHHHHHHHHHHHH
Confidence 43333333345568999999999999875 48999988777666543
No 111
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=34.49 E-value=7.7 Score=38.45 Aligned_cols=15 Identities=27% Similarity=0.514 Sum_probs=13.2
Q ss_pred hhhhhhhcccCCCCC
Q 004387 573 THNICHECCHGIGPH 587 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~ 587 (757)
..|++|||||.+|-.
T Consensus 137 a~~~AHElGHnlG~~ 151 (214)
T 1r55_A 137 AATMAHEIGHSLGLS 151 (214)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCc
Confidence 689999999999963
No 112
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=34.43 E-value=7.7 Score=40.83 Aligned_cols=16 Identities=13% Similarity=0.042 Sum_probs=13.6
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
.+.|++|||||.+|-.
T Consensus 143 ~a~t~AHElGHnlGm~ 158 (316)
T 2rjp_A 143 SAFTAAHQLGHVFNML 158 (316)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhcCcc
Confidence 4589999999999963
No 113
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=34.09 E-value=7.9 Score=40.16 Aligned_cols=16 Identities=25% Similarity=0.279 Sum_probs=13.6
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
...|++|||||.+|-.
T Consensus 188 ~a~~~AHElGHnlGm~ 203 (288)
T 2i47_A 188 ADLVTTHELGHNFGAE 203 (288)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhcCCc
Confidence 4688999999999963
No 114
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=33.26 E-value=8.1 Score=42.57 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.1
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|+.||+||.+|-.+
T Consensus 376 l~~Va~HE~GHaLGL~H 392 (425)
T 1l6j_A 376 LFLVAAHEFGHALGLDH 392 (425)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred chhhhhhhhhhhcccCc
Confidence 35899999999999643
No 115
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=32.07 E-value=8.9 Score=41.39 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=13.6
Q ss_pred hhhhhhhhcccCCCCC
Q 004387 572 FTHNICHECCHGIGPH 587 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~ 587 (757)
.+.|++|||||.+|-.
T Consensus 143 ~a~~~AHElGHnlGm~ 158 (378)
T 2rjq_A 143 AAFTVAHEIGHLLGLS 158 (378)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred hhhhhhhhhhhhcCcc
Confidence 4589999999999964
No 116
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=31.00 E-value=8 Score=35.71 Aligned_cols=15 Identities=33% Similarity=0.370 Sum_probs=12.8
Q ss_pred hhhhhhhcccCCCCC
Q 004387 573 THNICHECCHGIGPH 587 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~ 587 (757)
..|..||+||-+|-.
T Consensus 78 ~~v~aHE~GH~LGL~ 92 (132)
T 1c7k_A 78 TRVTAHETGHVLGLP 92 (132)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred ceEEeeeehhccCCc
Confidence 468999999999963
No 117
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=28.62 E-value=11 Score=41.15 Aligned_cols=15 Identities=33% Similarity=0.530 Sum_probs=13.0
Q ss_pred hhhhhhhhcccCCCC
Q 004387 572 FTHNICHECCHGIGP 586 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk 586 (757)
++.|++|||||.+|-
T Consensus 139 ~a~t~AHElGHnlGm 153 (397)
T 3k7n_A 139 VASTITHELGHNLGI 153 (397)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhhhHHHHHHHHcCC
Confidence 457899999999995
No 118
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=27.90 E-value=13 Score=40.91 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.3
Q ss_pred hhhhhhhcccCCCCCC
Q 004387 573 THNICHECCHGIGPHS 588 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~ 588 (757)
..|++|||||.+|-.+
T Consensus 140 a~t~AHElGHnlGm~H 155 (427)
T 2e3x_A 140 AVIMAHELSHNLGMYH 155 (427)
T ss_dssp HHHHHHHHHHTTTCCC
T ss_pred eeehHHHHHHhhCCcc
Confidence 4689999999999643
No 119
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=27.74 E-value=10 Score=40.94 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.2
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|++||+||.+|-.+
T Consensus 107 ~~~~~~HE~gH~lGl~h 123 (365)
T 3ba0_A 107 LFLTAVHEIGHSLGLGH 123 (365)
T ss_dssp SSHHHHHHHHHHHTCCC
T ss_pred ceeehhhhhhhhhcCCC
Confidence 46899999999999644
No 120
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=27.44 E-value=12 Score=41.23 Aligned_cols=15 Identities=27% Similarity=0.492 Sum_probs=13.1
Q ss_pred hhhhhhhhcccCCCC
Q 004387 572 FTHNICHECCHGIGP 586 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk 586 (757)
++.|++|||||.+|-
T Consensus 144 ~a~t~AHElGHnlGm 158 (422)
T 3k7l_A 144 VAITMAHEMGHNLGM 158 (422)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHcCC
Confidence 457899999999996
No 121
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=26.95 E-value=12 Score=41.13 Aligned_cols=16 Identities=19% Similarity=0.248 Sum_probs=13.7
Q ss_pred hhhhhhhcccCCCCCC
Q 004387 573 THNICHECCHGIGPHS 588 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~ 588 (757)
.+|+.||+||.+|-.+
T Consensus 367 ~~va~HE~GHaLGL~H 382 (421)
T 1eak_A 367 FLVAAHQFGHAMGLEH 382 (421)
T ss_dssp HHHHHHHHHHHTTCCC
T ss_pred hhhhhhhhhhccCCCC
Confidence 5899999999999643
No 122
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=26.81 E-value=13 Score=41.10 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=13.4
Q ss_pred hhhhhhhcccCCCCCC
Q 004387 573 THNICHECCHGIGPHS 588 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~ 588 (757)
..|++|||||.+|-.+
T Consensus 147 a~t~AHElGHnlG~~H 162 (427)
T 2ero_A 147 AIAMAHEMGHNLGMDH 162 (427)
T ss_dssp HHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhcCCcc
Confidence 4789999999999643
No 123
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=26.01 E-value=13 Score=40.81 Aligned_cols=16 Identities=25% Similarity=0.412 Sum_probs=13.3
Q ss_pred hhhhhhhcccCCCCCC
Q 004387 573 THNICHECCHGIGPHS 588 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~ 588 (757)
..|++|||||.+|-.+
T Consensus 138 a~t~AHElGHnlG~~H 153 (419)
T 2dw0_A 138 AVIMAHEMGHNLGINH 153 (419)
T ss_dssp HHHHHHHHHHHTTCCC
T ss_pred hhhHHHHHHHHcCCcc
Confidence 4789999999999643
No 124
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=25.62 E-value=12 Score=36.97 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=14.7
Q ss_pred hhhhhhhhcccCCCCCCc
Q 004387 572 FTHNICHECCHGIGPHSI 589 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~~ 589 (757)
...|++||+||.+|-.+.
T Consensus 93 ~~g~i~HEl~HaLGf~HE 110 (199)
T 3lqb_A 93 YSGIAQHELNHALGFYHE 110 (199)
T ss_dssp SHHHHHHHHHHHHTCCCG
T ss_pred ccchHHHHHHHHhcccee
Confidence 358999999999997543
No 125
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=25.25 E-value=13 Score=35.46 Aligned_cols=17 Identities=24% Similarity=0.345 Sum_probs=13.8
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
...++.||+||-+|-.+
T Consensus 114 ~~k~~~HElGH~lGL~H 130 (163)
T 4axq_A 114 VVKEAVHEIGHVLGLKH 130 (163)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 45789999999999643
No 126
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=24.81 E-value=13 Score=36.76 Aligned_cols=18 Identities=22% Similarity=0.084 Sum_probs=14.6
Q ss_pred hhhhhhhhcccCCCCCCc
Q 004387 572 FTHNICHECCHGIGPHSI 589 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~~ 589 (757)
...|++|||||.+|-.+.
T Consensus 87 ~~g~i~HEl~HalGf~HE 104 (201)
T 3edh_A 87 KFGIVVHELGHVVGFWHE 104 (201)
T ss_dssp SHHHHHHHHHHHHTBCCG
T ss_pred ccchhHHHHHHHhcchhh
Confidence 357999999999997553
No 127
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=23.53 E-value=15 Score=40.70 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.3
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
..+|++||+||.+|-.+
T Consensus 193 l~~v~~HE~GH~lGl~H 209 (450)
T 1su3_A 193 LHRVAAHELGHSLGLSH 209 (450)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhchhhhHHHHhccCCC
Confidence 46899999999999644
No 128
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=21.63 E-value=18 Score=37.28 Aligned_cols=18 Identities=22% Similarity=0.121 Sum_probs=14.9
Q ss_pred hhhhhhhhcccCCCCCCc
Q 004387 572 FTHNICHECCHGIGPHSI 589 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~~ 589 (757)
...|+.||+||-+|=.++
T Consensus 162 ~g~TltHEvGH~LGL~Ht 179 (262)
T 2cki_A 162 KGRTATHEIGHWLNLYHI 179 (262)
T ss_dssp SSHHHHHHHHHHTTCCCT
T ss_pred ccchhhhhhhhhhcceee
Confidence 358999999999997653
No 129
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=20.22 E-value=15 Score=37.25 Aligned_cols=16 Identities=31% Similarity=0.330 Sum_probs=13.8
Q ss_pred hhhhhhhcccCCCCCC
Q 004387 573 THNICHECCHGIGPHS 588 (757)
Q Consensus 573 ~~v~lHElgHg~Gk~~ 588 (757)
..|++||+||.+|-.+
T Consensus 121 ~g~i~HEl~HaLGf~H 136 (235)
T 3lq0_A 121 HGTILHALMHAIGFYH 136 (235)
T ss_dssp HHHHHHHHHHHHHBCC
T ss_pred cchHHHHHHHHhccce
Confidence 5899999999999754
No 130
>2x7m_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.50A {Methanopyrus kandleri}
Probab=20.16 E-value=19 Score=35.34 Aligned_cols=17 Identities=24% Similarity=0.366 Sum_probs=13.9
Q ss_pred hhhhhhhhcccCCCCCC
Q 004387 572 FTHNICHECCHGIGPHS 588 (757)
Q Consensus 572 ~~~v~lHElgHg~Gk~~ 588 (757)
...|+.||+||.+|-.+
T Consensus 139 ~~~~~~HElGH~lGl~H 155 (195)
T 2x7m_A 139 VVKELTHELGHTFGLGH 155 (195)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhhcCCCC
Confidence 35789999999999744
No 131
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=20.13 E-value=54 Score=37.50 Aligned_cols=52 Identities=27% Similarity=0.192 Sum_probs=31.2
Q ss_pred hhhhhcccCCCCCCcccCCcccccccchhhcc-cchHHhHHHHHHHHHHH--HHHHhcCCCC
Q 004387 575 NICHECCHGIGPHSITLPDGRQSTVRLELQEL-HSAMEEAKADIVGLWAL--KFLIGRDLLP 633 (757)
Q Consensus 575 v~lHElgHg~Gk~~~~~~~g~~~t~~~~~~~~-~s~~EE~rAd~vglyl~--~~ll~~G~~~ 633 (757)
|++||+||+.-- +.- .++.+ .+... ..++.|+-.++.|+.+. +.|..+|++.
T Consensus 344 tl~HE~GHa~y~---~~~--~~~p~--~~~~g~~~~fhEa~s~~~~~s~~~~~~l~~~~ll~ 398 (589)
T 1uze_A 344 VAHHEMGHIQYF---MQY--KDLPV--ALREGANPGFHEAIGDVLALSVSTPKHLHSLNLLS 398 (589)
T ss_dssp HHHHHHHHHHHH---HHT--TTSCG--GGCSCSSHHHHHHHHHHHHHHHTSHHHHHHTTSCC
T ss_pred HHHHHHHHHHHH---HHH--ccCCh--hhhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Confidence 889999998642 110 11111 12122 23678888889988876 4566667764
Done!