Query 004388
Match_columns 757
No_of_seqs 571 out of 3497
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 22:35:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004388.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004388hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 3.2E-51 6.9E-56 447.9 23.3 274 389-671 61-352 (361)
2 KOG0192 Tyrosine kinase specif 100.0 7.7E-46 1.7E-50 403.2 24.9 251 408-674 46-306 (362)
3 KOG0581 Mitogen-activated prot 100.0 1.1E-44 2.4E-49 377.3 17.7 240 408-662 84-331 (364)
4 KOG0575 Polo-like serine/threo 100.0 2.4E-43 5.2E-48 386.4 21.6 243 403-664 18-267 (592)
5 KOG0595 Serine/threonine-prote 100.0 1.7E-43 3.6E-48 371.2 19.1 241 402-662 9-264 (429)
6 KOG0598 Ribosomal protein S6 k 100.0 2.5E-43 5.5E-48 367.2 17.7 240 402-659 24-270 (357)
7 KOG0591 NIMA (never in mitosis 100.0 9.1E-44 2E-48 355.7 11.7 250 404-666 20-281 (375)
8 KOG0615 Serine/threonine prote 100.0 1.4E-42 3E-47 363.5 15.0 242 403-663 172-434 (475)
9 KOG0197 Tyrosine kinases [Sign 100.0 4.4E-42 9.5E-47 373.3 18.2 249 406-671 209-461 (468)
10 KOG0592 3-phosphoinositide-dep 100.0 1.1E-41 2.5E-46 367.3 17.6 246 403-661 73-333 (604)
11 KOG0605 NDR and related serine 100.0 1.9E-40 4.1E-45 358.4 25.8 247 401-659 139-435 (550)
12 KOG0616 cAMP-dependent protein 100.0 7.9E-41 1.7E-45 337.4 17.9 233 403-657 44-283 (355)
13 KOG0198 MEKK and related serin 100.0 8.2E-41 1.8E-45 353.8 17.9 249 403-664 17-274 (313)
14 KOG0593 Predicted protein kina 100.0 6.9E-41 1.5E-45 338.2 16.1 248 404-663 3-281 (396)
15 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.8E-40 2.1E-44 356.3 21.9 258 402-672 6-335 (338)
16 PHA02988 hypothetical protein; 100.0 1.9E-39 4.2E-44 345.7 23.2 255 391-672 13-280 (283)
17 KOG0597 Serine-threonine prote 100.0 4.3E-40 9.3E-45 354.5 16.1 241 404-664 3-249 (808)
18 KOG0578 p21-activated serine/t 100.0 2E-39 4.3E-44 353.0 17.1 240 404-662 274-519 (550)
19 KOG0600 Cdc2-related protein k 100.0 2.5E-39 5.4E-44 346.7 16.5 247 404-664 118-398 (560)
20 KOG0583 Serine/threonine prote 100.0 1.2E-38 2.7E-43 349.5 21.8 243 401-662 15-271 (370)
21 KOG0661 MAPK related serine/th 100.0 1.2E-39 2.7E-44 346.7 13.2 248 402-662 9-287 (538)
22 cd05631 STKc_GRK4 Catalytic do 100.0 2E-38 4.3E-43 337.9 22.0 244 404-661 1-251 (285)
23 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-38 2.7E-43 340.6 19.7 234 404-659 2-242 (291)
24 KOG0193 Serine/threonine prote 100.0 2.7E-39 5.8E-44 352.7 13.9 252 404-669 393-651 (678)
25 KOG0694 Serine/threonine prote 100.0 1.3E-38 2.8E-43 352.8 18.7 241 400-660 365-613 (694)
26 cd05096 PTKc_DDR1 Catalytic do 100.0 4.6E-38 9.9E-43 337.9 22.2 255 403-668 5-302 (304)
27 PTZ00263 protein kinase A cata 100.0 2.7E-38 6E-43 344.2 19.1 236 403-660 18-260 (329)
28 cd05571 STKc_PKB Catalytic dom 100.0 3.1E-38 6.8E-43 342.8 18.8 231 410-659 2-239 (323)
29 KOG0580 Serine/threonine prote 100.0 9.9E-39 2.1E-43 313.9 12.8 242 402-662 21-269 (281)
30 KOG1026 Nerve growth factor re 100.0 1.2E-38 2.6E-43 361.8 15.0 253 406-673 489-764 (774)
31 cd05585 STKc_YPK1_like Catalyt 100.0 7.2E-38 1.6E-42 338.2 20.2 232 411-661 1-239 (312)
32 KOG0582 Ste20-like serine/thre 100.0 1.3E-37 2.7E-42 329.1 20.9 248 402-664 25-291 (516)
33 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-37 2.7E-42 345.3 21.9 255 402-670 34-373 (375)
34 KOG0588 Serine/threonine prote 100.0 4E-38 8.7E-43 345.9 17.3 237 404-663 13-260 (786)
35 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.7E-37 3.7E-42 327.0 21.3 251 403-670 5-264 (266)
36 KOG0585 Ca2+/calmodulin-depend 100.0 8.4E-38 1.8E-42 332.1 18.6 249 401-663 95-369 (576)
37 KOG4721 Serine/threonine prote 100.0 8.2E-39 1.8E-43 344.1 10.7 234 409-668 130-365 (904)
38 cd05108 PTKc_EGFR Catalytic do 100.0 3.3E-37 7.2E-42 333.4 23.3 253 403-672 7-269 (316)
39 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-37 2.4E-42 338.5 19.6 231 410-659 2-239 (323)
40 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-37 3.2E-42 344.5 20.9 256 402-671 37-372 (374)
41 KOG0659 Cdk activating kinase 100.0 1.5E-37 3.2E-42 309.6 18.5 244 404-662 3-277 (318)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 3.5E-37 7.6E-42 335.7 23.2 248 402-662 4-297 (331)
43 PTZ00426 cAMP-dependent protei 100.0 7.8E-38 1.7E-42 342.3 18.1 235 403-659 30-272 (340)
44 PTZ00267 NIMA-related protein 100.0 2.7E-37 5.9E-42 353.1 22.7 248 404-664 68-321 (478)
45 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1E-37 2.2E-42 340.0 18.2 242 404-662 2-253 (333)
46 cd05593 STKc_PKB_gamma Catalyt 100.0 1.8E-37 3.9E-42 337.7 19.6 231 410-659 2-239 (328)
47 cd05048 PTKc_Ror Catalytic Dom 100.0 3E-37 6.6E-42 327.3 20.8 251 404-669 6-281 (283)
48 cd05608 STKc_GRK1 Catalytic do 100.0 3.5E-37 7.7E-42 327.4 20.9 246 411-668 1-254 (280)
49 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-37 2.6E-42 327.3 17.1 245 408-667 4-258 (259)
50 cd05587 STKc_cPKC Catalytic do 100.0 3.7E-37 8E-42 334.4 21.5 240 404-662 1-248 (324)
51 cd05584 STKc_p70S6K Catalytic 100.0 3.2E-37 7E-42 334.8 20.7 234 409-661 2-246 (323)
52 cd05616 STKc_cPKC_beta Catalyt 100.0 3.7E-37 8E-42 334.3 21.1 239 404-661 1-247 (323)
53 cd05592 STKc_nPKC_theta_delta 100.0 3.1E-37 6.7E-42 334.0 20.4 236 410-664 2-245 (316)
54 cd05062 PTKc_IGF-1R Catalytic 100.0 5E-37 1.1E-41 325.0 21.2 254 401-668 4-275 (277)
55 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.3E-37 1.1E-41 342.5 22.4 256 402-671 36-397 (400)
56 cd05093 PTKc_TrkB Catalytic do 100.0 8.7E-37 1.9E-41 325.4 23.0 257 403-673 5-281 (288)
57 cd05589 STKc_PKN Catalytic dom 100.0 3.4E-37 7.4E-42 334.7 20.2 244 405-668 1-254 (324)
58 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.5E-37 1.4E-41 333.4 22.0 251 404-664 1-288 (338)
59 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-36 2.4E-41 318.7 22.4 243 410-669 2-253 (257)
60 cd05614 STKc_MSK2_N N-terminal 100.0 4.6E-37 9.9E-42 334.6 20.1 244 404-661 1-257 (332)
61 cd05605 STKc_GRK4_like Catalyt 100.0 6.8E-37 1.5E-41 326.0 20.9 244 404-661 1-251 (285)
62 cd07848 STKc_CDKL5 Catalytic d 100.0 5.1E-37 1.1E-41 326.4 19.9 249 403-662 1-280 (287)
63 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-36 2.6E-41 319.9 22.5 253 403-671 4-265 (266)
64 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-37 5.1E-42 336.1 17.1 231 410-659 2-240 (325)
65 cd05588 STKc_aPKC Catalytic do 100.0 5.4E-37 1.2E-41 334.0 19.9 239 410-660 2-250 (329)
66 cd05582 STKc_RSK_N N-terminal 100.0 1.8E-37 3.8E-42 335.9 15.9 240 409-667 2-250 (318)
67 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-36 2.8E-41 317.9 21.9 247 403-667 4-254 (256)
68 cd05049 PTKc_Trk Catalytic dom 100.0 8.8E-37 1.9E-41 323.0 20.5 252 403-668 5-278 (280)
69 cd05619 STKc_nPKC_theta Cataly 100.0 8.1E-37 1.8E-41 330.8 20.7 236 410-664 2-245 (316)
70 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.2E-37 7E-42 337.9 17.4 247 403-662 1-281 (350)
71 KOG0201 Serine/threonine prote 100.0 3.1E-38 6.7E-43 333.8 9.0 243 403-664 13-261 (467)
72 cd05620 STKc_nPKC_delta Cataly 100.0 6.7E-37 1.4E-41 331.4 19.6 237 410-665 2-246 (316)
73 cd07862 STKc_CDK6 Catalytic do 100.0 1.7E-36 3.6E-41 323.0 22.4 241 404-662 2-283 (290)
74 cd05115 PTKc_Zap-70 Catalytic 100.0 2.3E-36 5E-41 316.9 22.8 244 410-669 2-253 (257)
75 cd05094 PTKc_TrkC Catalytic do 100.0 2E-36 4.3E-41 323.1 22.6 255 404-672 6-283 (291)
76 cd05618 STKc_aPKC_iota Catalyt 100.0 7.8E-37 1.7E-41 332.8 19.8 240 410-661 2-251 (329)
77 PTZ00283 serine/threonine prot 100.0 1.5E-36 3.2E-41 347.9 23.1 256 396-664 25-295 (496)
78 cd05111 PTK_HER3 Pseudokinase 100.0 3E-36 6.6E-41 319.9 23.4 252 404-672 8-269 (279)
79 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-36 4.2E-41 330.3 22.5 250 402-664 4-297 (333)
80 cd05072 PTKc_Lyn Catalytic dom 100.0 1.9E-36 4E-41 317.4 21.4 251 403-670 6-260 (261)
81 cd05575 STKc_SGK Catalytic dom 100.0 8.9E-37 1.9E-41 331.3 19.7 236 410-664 2-245 (323)
82 cd05617 STKc_aPKC_zeta Catalyt 100.0 1E-36 2.2E-41 331.5 20.1 240 410-661 2-249 (327)
83 KOG0663 Protein kinase PITSLRE 100.0 3E-37 6.6E-42 315.6 14.9 245 403-662 76-357 (419)
84 cd05590 STKc_nPKC_eta Catalyti 100.0 8.9E-37 1.9E-41 331.0 19.6 233 410-661 2-242 (320)
85 cd05075 PTKc_Axl Catalytic dom 100.0 2.6E-36 5.5E-41 318.1 22.4 250 406-670 2-270 (272)
86 PHA03212 serine/threonine kina 100.0 1.3E-36 2.8E-41 338.8 21.2 242 403-662 92-372 (391)
87 PLN00034 mitogen-activated pro 100.0 7.3E-37 1.6E-41 336.2 19.0 239 406-663 77-325 (353)
88 cd05591 STKc_nPKC_epsilon Cata 100.0 8.4E-37 1.8E-41 331.2 19.2 233 410-661 2-242 (321)
89 KOG0589 Serine/threonine prote 100.0 3.1E-37 6.8E-42 334.5 15.7 247 403-665 4-257 (426)
90 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-36 4.4E-41 325.2 21.8 247 402-662 4-284 (303)
91 cd05607 STKc_GRK7 Catalytic do 100.0 3E-36 6.4E-41 319.8 22.8 241 411-664 1-248 (277)
92 cd05052 PTKc_Abl Catalytic dom 100.0 3.3E-36 7.1E-41 316.3 22.8 249 404-670 7-261 (263)
93 cd05054 PTKc_VEGFR Catalytic d 100.0 1.5E-36 3.3E-41 331.7 21.1 256 403-672 7-334 (337)
94 cd05629 STKc_NDR_like_fungal C 100.0 8.5E-37 1.8E-41 338.7 19.3 247 403-662 1-301 (377)
95 cd05626 STKc_LATS2 Catalytic d 100.0 9.6E-37 2.1E-41 338.8 19.7 248 404-663 2-302 (381)
96 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-36 3.3E-41 329.6 20.8 244 404-666 1-252 (323)
97 cd05599 STKc_NDR_like Catalyti 100.0 6.5E-37 1.4E-41 337.7 18.0 244 403-659 1-286 (364)
98 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-36 3.1E-41 329.0 20.2 233 410-661 2-242 (318)
99 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.9E-36 6.3E-41 321.7 22.0 248 403-662 5-281 (288)
100 cd05035 PTKc_Axl_like Catalyti 100.0 4.9E-36 1.1E-40 315.6 23.3 253 405-671 1-272 (273)
101 cd08529 STKc_FA2-like Catalyti 100.0 4.8E-36 1E-40 312.6 22.8 243 404-662 1-249 (256)
102 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.3E-36 9.3E-41 318.9 22.8 256 406-672 7-282 (283)
103 cd05090 PTKc_Ror1 Catalytic do 100.0 3.7E-36 8E-41 319.4 22.2 250 404-668 6-280 (283)
104 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.2E-36 6.9E-41 319.8 21.7 260 403-671 4-283 (284)
105 cd05060 PTKc_Syk_like Catalyti 100.0 4.2E-36 9.2E-41 314.2 22.3 246 409-671 1-255 (257)
106 cd05068 PTKc_Frk_like Catalyti 100.0 4.7E-36 1E-40 314.6 22.7 250 402-669 5-259 (261)
107 KOG0610 Putative serine/threon 100.0 1.9E-36 4.2E-41 318.0 19.5 247 404-661 78-383 (459)
108 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-36 3.3E-41 317.8 18.8 252 402-670 5-260 (261)
109 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.3E-36 7.1E-41 315.4 21.3 246 404-667 5-254 (256)
110 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-36 3.5E-41 328.9 19.6 238 410-666 2-247 (321)
111 cd05045 PTKc_RET Catalytic dom 100.0 4.4E-36 9.6E-41 320.1 22.7 253 404-671 1-286 (290)
112 KOG0194 Protein tyrosine kinas 100.0 6.5E-37 1.4E-41 337.9 16.5 253 404-674 158-423 (474)
113 cd05053 PTKc_FGFR Catalytic do 100.0 3.1E-36 6.8E-41 321.4 21.1 256 401-671 10-291 (293)
114 cd05082 PTKc_Csk Catalytic dom 100.0 4.4E-36 9.5E-41 313.9 21.8 243 404-669 7-254 (256)
115 cd05602 STKc_SGK1 Catalytic do 100.0 1.8E-36 4E-41 329.1 19.4 238 410-666 2-247 (325)
116 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.8E-36 1.3E-40 314.9 22.6 255 402-671 4-267 (268)
117 KOG0611 Predicted serine/threo 100.0 5.3E-37 1.2E-41 319.0 14.3 238 404-662 54-299 (668)
118 cd05109 PTKc_HER2 Catalytic do 100.0 5E-36 1.1E-40 317.7 22.2 252 403-671 7-268 (279)
119 cd05628 STKc_NDR1 Catalytic do 100.0 2.3E-36 5.1E-41 333.5 20.4 248 403-662 1-289 (363)
120 KOG0660 Mitogen-activated prot 100.0 8.4E-37 1.8E-41 317.2 15.7 254 400-664 19-308 (359)
121 cd05092 PTKc_TrkA Catalytic do 100.0 3.6E-36 7.8E-41 319.4 21.0 251 404-668 6-278 (280)
122 cd05091 PTKc_Ror2 Catalytic do 100.0 2.5E-36 5.4E-41 320.5 19.6 251 405-669 7-281 (283)
123 cd05071 PTKc_Src Catalytic dom 100.0 6.2E-36 1.3E-40 314.4 22.4 251 403-670 6-259 (262)
124 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.5E-36 1.2E-40 317.2 22.0 253 401-668 4-275 (277)
125 cd05604 STKc_SGK3 Catalytic do 100.0 1.6E-36 3.5E-41 329.5 18.3 236 410-664 2-245 (325)
126 cd05110 PTKc_HER4 Catalytic do 100.0 5.4E-36 1.2E-40 322.0 22.1 285 403-704 7-301 (303)
127 cd05039 PTKc_Csk_like Catalyti 100.0 8.9E-36 1.9E-40 311.3 23.0 246 403-670 6-255 (256)
128 cd05632 STKc_GRK5 Catalytic do 100.0 6.3E-36 1.4E-40 318.6 22.2 250 405-668 2-258 (285)
129 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.2E-36 2E-40 312.1 23.0 249 404-669 7-258 (260)
130 cd05089 PTKc_Tie1 Catalytic do 100.0 6.1E-36 1.3E-40 320.5 22.0 253 403-672 2-276 (297)
131 cd05032 PTKc_InsR_like Catalyt 100.0 4.9E-36 1.1E-40 316.8 20.8 252 403-668 6-275 (277)
132 cd05598 STKc_LATS Catalytic do 100.0 9.6E-37 2.1E-41 338.0 16.1 246 404-662 2-297 (376)
133 cd05059 PTKc_Tec_like Catalyti 100.0 7.8E-36 1.7E-40 312.2 21.7 246 404-667 5-254 (256)
134 cd05084 PTKc_Fes Catalytic dom 100.0 7.8E-36 1.7E-40 311.0 21.6 242 410-668 2-250 (252)
135 KOG1095 Protein tyrosine kinas 100.0 1.8E-36 4E-41 355.4 18.7 254 404-672 693-962 (1025)
136 cd05625 STKc_LATS1 Catalytic d 100.0 2.1E-36 4.5E-41 336.2 18.3 243 404-659 2-295 (382)
137 PRK13184 pknD serine/threonine 100.0 5.5E-36 1.2E-40 353.9 22.8 264 403-673 2-292 (932)
138 KOG1989 ARK protein kinase fam 100.0 3.8E-36 8.3E-41 343.0 20.6 258 402-672 36-312 (738)
139 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.7E-36 1.9E-40 320.8 22.3 257 403-674 18-302 (307)
140 cd05097 PTKc_DDR_like Catalyti 100.0 7.3E-36 1.6E-40 319.4 21.3 256 403-669 5-294 (295)
141 cd05056 PTKc_FAK Catalytic dom 100.0 1.3E-35 2.8E-40 312.9 22.8 253 403-672 6-266 (270)
142 cd05088 PTKc_Tie2 Catalytic do 100.0 8E-36 1.7E-40 320.8 21.6 252 403-671 7-280 (303)
143 cd05066 PTKc_EphR_A Catalytic 100.0 9.7E-36 2.1E-40 313.4 21.8 253 403-670 4-265 (267)
144 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.1E-35 2.4E-40 319.5 22.6 258 402-674 14-299 (304)
145 cd05061 PTKc_InsR Catalytic do 100.0 9E-36 1.9E-40 317.6 21.7 255 401-669 4-276 (288)
146 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-35 2.3E-40 332.0 23.0 256 402-671 36-399 (401)
147 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-35 3.1E-40 312.1 22.5 253 397-662 2-261 (268)
148 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-35 2.4E-40 315.0 21.8 256 402-672 5-277 (280)
149 cd00192 PTKc Catalytic domain 100.0 1.3E-35 2.8E-40 309.2 21.9 244 410-667 2-260 (262)
150 KOG0196 Tyrosine kinase, EPH ( 100.0 7.1E-37 1.5E-41 340.3 12.8 256 406-676 632-896 (996)
151 cd05630 STKc_GRK6 Catalytic do 100.0 1.1E-35 2.3E-40 317.0 21.4 242 405-660 2-250 (285)
152 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-35 2.4E-40 317.4 21.5 252 403-668 5-294 (296)
153 cd05069 PTKc_Yes Catalytic dom 100.0 2E-35 4.2E-40 309.9 23.0 250 403-669 6-258 (260)
154 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.6E-35 3.5E-40 310.3 22.0 249 403-669 6-258 (260)
155 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-35 2.7E-40 310.2 21.0 244 410-667 2-254 (257)
156 cd08228 STKc_Nek6 Catalytic do 100.0 1.4E-35 3E-40 311.6 21.5 254 403-671 2-265 (267)
157 cd05601 STKc_CRIK Catalytic do 100.0 2E-36 4.2E-41 329.4 15.6 243 403-662 1-259 (330)
158 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.3E-35 2.9E-40 324.9 22.1 257 403-672 7-340 (343)
159 KOG0658 Glycogen synthase kina 100.0 6.3E-37 1.4E-41 318.7 10.9 259 401-674 22-315 (364)
160 cd05050 PTKc_Musk Catalytic do 100.0 1.4E-35 3E-40 315.8 21.5 254 402-669 4-287 (288)
161 cd06619 PKc_MKK5 Catalytic dom 100.0 1.9E-35 4.1E-40 313.6 22.4 241 404-662 2-249 (279)
162 cd05055 PTKc_PDGFR Catalytic d 100.0 1.8E-35 3.9E-40 318.0 22.4 255 401-670 33-300 (302)
163 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.5E-35 7.6E-40 308.0 23.8 254 403-671 2-265 (267)
164 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-35 2.5E-40 312.4 20.1 246 403-662 9-261 (267)
165 KOG0594 Protein kinase PCTAIRE 100.0 6E-36 1.3E-40 311.9 17.6 246 404-662 12-298 (323)
166 cd05597 STKc_DMPK_like Catalyt 100.0 1.7E-35 3.7E-40 322.5 22.1 244 403-662 1-262 (331)
167 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.8E-35 6.1E-40 318.0 23.5 257 403-674 12-296 (314)
168 cd05058 PTKc_Met_Ron Catalytic 100.0 2.2E-35 4.8E-40 309.2 22.0 248 410-671 2-259 (262)
169 cd05596 STKc_ROCK Catalytic do 100.0 6.9E-36 1.5E-40 330.7 19.2 244 401-662 41-300 (370)
170 PTZ00036 glycogen synthase kin 100.0 4.9E-36 1.1E-40 339.2 18.3 246 403-664 66-349 (440)
171 cd06625 STKc_MEKK3_like Cataly 100.0 3.5E-35 7.6E-40 307.6 23.5 245 403-662 2-256 (263)
172 cd05065 PTKc_EphR_B Catalytic 100.0 1.9E-35 4.1E-40 311.4 21.5 254 404-670 5-267 (269)
173 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-35 4.4E-40 322.0 22.3 243 404-662 2-262 (332)
174 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.8E-35 6.2E-40 309.2 22.4 246 405-662 2-260 (267)
175 PTZ00266 NIMA-related protein 100.0 1.3E-35 2.7E-40 352.1 21.7 251 400-664 10-293 (1021)
176 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.4E-35 5.3E-40 313.5 21.8 259 403-670 4-282 (284)
177 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.4E-35 5.2E-40 313.4 21.7 245 404-662 2-258 (286)
178 cd05621 STKc_ROCK2 Catalytic d 100.0 9.6E-36 2.1E-40 329.5 19.1 244 401-662 41-300 (370)
179 cd05047 PTKc_Tie Catalytic dom 100.0 3.4E-35 7.5E-40 310.0 22.5 245 410-671 2-268 (270)
180 cd05083 PTKc_Chk Catalytic dom 100.0 1.9E-35 4.2E-40 308.6 20.4 243 403-668 6-251 (254)
181 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.5E-35 5.4E-40 310.1 21.1 234 410-667 2-260 (262)
182 cd05095 PTKc_DDR2 Catalytic do 100.0 3.2E-35 6.9E-40 314.6 22.0 258 403-668 5-294 (296)
183 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-35 2.7E-40 312.8 18.6 246 400-662 3-265 (272)
184 cd06631 STKc_YSK4 Catalytic do 100.0 2.9E-35 6.2E-40 309.1 21.3 246 405-662 2-258 (265)
185 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-35 5.8E-40 315.6 21.3 243 403-664 20-268 (296)
186 cd07868 STKc_CDK8 Catalytic do 100.0 4.6E-35 9.9E-40 316.4 23.1 194 408-610 6-218 (317)
187 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.2E-35 6.8E-40 311.2 21.4 259 404-671 5-283 (284)
188 cd08229 STKc_Nek7 Catalytic do 100.0 3.6E-35 7.7E-40 308.5 21.6 253 404-671 3-265 (267)
189 cd06643 STKc_SLK Catalytic dom 100.0 3.6E-35 7.8E-40 311.6 21.6 241 405-662 7-258 (282)
190 cd06615 PKc_MEK Catalytic doma 100.0 3.7E-35 8.1E-40 316.3 22.0 246 403-662 1-283 (308)
191 cd07876 STKc_JNK2 Catalytic do 100.0 3.3E-35 7.2E-40 323.7 21.7 248 401-664 19-313 (359)
192 cd05622 STKc_ROCK1 Catalytic d 100.0 1.6E-35 3.5E-40 327.8 18.9 245 398-661 38-299 (371)
193 cd06645 STKc_MAP4K3 Catalytic 100.0 2E-35 4.4E-40 310.6 18.7 246 403-662 9-261 (267)
194 cd07861 STKc_CDK1_euk Catalyti 100.0 3.3E-35 7.3E-40 311.7 20.5 249 404-662 1-278 (285)
195 PTZ00284 protein kinase; Provi 100.0 2.8E-35 6.1E-40 335.8 21.3 250 396-662 122-434 (467)
196 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-35 2.4E-40 327.7 17.4 244 404-660 2-284 (360)
197 cd06613 STKc_MAP4K3_like Catal 100.0 5.2E-35 1.1E-39 305.8 21.4 247 403-662 3-256 (262)
198 cd05057 PTKc_EGFR_like Catalyt 100.0 7.2E-35 1.6E-39 308.8 22.7 252 403-671 7-268 (279)
199 cd07863 STKc_CDK4 Catalytic do 100.0 4.7E-35 1E-39 311.3 21.3 241 404-662 1-281 (288)
200 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.9E-35 6.3E-40 311.8 19.5 234 410-667 2-272 (274)
201 cd07853 STKc_NLK Catalytic dom 100.0 3.4E-35 7.3E-40 325.3 20.9 249 404-664 1-286 (372)
202 cd08219 STKc_Nek3 Catalytic do 100.0 4.4E-35 9.5E-40 305.9 20.6 243 404-662 1-248 (255)
203 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6.2E-35 1.3E-39 307.6 21.8 248 410-668 2-267 (269)
204 cd05085 PTKc_Fer Catalytic dom 100.0 6.8E-35 1.5E-39 303.3 21.8 242 410-668 2-248 (250)
205 KOG0199 ACK and related non-re 100.0 9E-36 1.9E-40 327.2 15.6 242 408-664 115-366 (1039)
206 cd05624 STKc_MRCK_beta Catalyt 100.0 4.6E-35 1E-39 319.1 21.2 237 403-655 1-253 (331)
207 KOG2345 Serine/threonine prote 100.0 5.8E-36 1.3E-40 295.5 12.6 261 402-669 20-298 (302)
208 cd05042 PTKc_Aatyk Catalytic d 100.0 5.4E-35 1.2E-39 307.9 20.8 244 410-668 2-267 (269)
209 cd08223 STKc_Nek4 Catalytic do 100.0 1.4E-34 3.1E-39 301.9 23.8 243 404-662 1-250 (257)
210 KOG4257 Focal adhesion tyrosin 100.0 7.8E-36 1.7E-40 324.0 14.6 247 406-669 392-647 (974)
211 cd06655 STKc_PAK2 Catalytic do 100.0 6.7E-35 1.5E-39 312.6 21.9 243 403-664 19-267 (296)
212 cd05034 PTKc_Src_like Catalyti 100.0 8.4E-35 1.8E-39 304.6 22.0 251 402-669 5-259 (261)
213 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.9E-35 8.5E-40 306.2 19.4 233 410-667 2-257 (259)
214 cd07867 STKc_CDC2L6 Catalytic 100.0 6E-35 1.3E-39 315.0 21.5 194 408-610 6-218 (317)
215 cd05100 PTKc_FGFR3 Catalytic d 100.0 6E-35 1.3E-39 318.4 21.6 257 403-673 12-295 (334)
216 cd06609 STKc_MST3_like Catalyt 100.0 5.8E-35 1.3E-39 308.5 20.8 240 404-662 2-247 (274)
217 cd05044 PTKc_c-ros Catalytic d 100.0 4.8E-35 1E-39 307.8 20.1 244 410-668 2-267 (269)
218 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.6E-35 1.2E-39 310.7 20.7 247 403-662 5-262 (284)
219 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-35 2.6E-40 323.3 15.9 235 411-664 1-247 (330)
220 KOG4717 Serine/threonine prote 100.0 3.8E-35 8.3E-40 312.6 19.2 240 404-662 19-266 (864)
221 cd06612 STKc_MST1_2 Catalytic 100.0 6.8E-35 1.5E-39 303.9 21.0 241 403-662 3-249 (256)
222 cd07875 STKc_JNK1 Catalytic do 100.0 4.5E-35 9.8E-40 323.2 20.6 246 401-662 22-314 (364)
223 cd06656 STKc_PAK3 Catalytic do 100.0 4.8E-35 1E-39 313.8 20.2 242 403-663 19-266 (297)
224 KOG1151 Tousled-like protein k 100.0 4.3E-34 9.2E-39 299.9 26.5 256 402-662 462-737 (775)
225 cd07874 STKc_JNK3 Catalytic do 100.0 3.3E-35 7.1E-40 323.1 19.2 247 401-663 15-308 (355)
226 KOG4278 Protein tyrosine kinas 100.0 1.1E-35 2.4E-40 321.9 15.1 250 404-671 268-523 (1157)
227 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.2E-35 7E-40 316.7 18.6 248 403-662 6-282 (309)
228 PHA03207 serine/threonine kina 100.0 3.9E-35 8.5E-40 327.2 19.7 244 403-662 92-371 (392)
229 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-34 2.4E-39 309.7 22.3 243 403-662 12-265 (292)
230 KOG4279 Serine/threonine prote 100.0 7.7E-36 1.7E-40 326.6 13.4 240 409-664 581-830 (1226)
231 cd05046 PTK_CCK4 Pseudokinase 100.0 1E-34 2.2E-39 306.6 21.7 250 403-668 5-273 (275)
232 cd06651 STKc_MEKK3 Catalytic d 100.0 1.3E-34 2.9E-39 304.6 22.4 244 403-662 2-257 (266)
233 KOG0032 Ca2+/calmodulin-depend 100.0 5.2E-35 1.1E-39 321.0 19.9 241 401-662 33-289 (382)
234 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.2E-35 4.8E-40 309.3 16.2 235 410-668 2-257 (258)
235 PF00069 Pkinase: Protein kina 100.0 4.5E-35 9.7E-40 305.7 18.4 245 405-662 1-253 (260)
236 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.5E-35 1.8E-39 318.2 21.3 245 401-663 13-295 (343)
237 cd06611 STKc_SLK_like Catalyti 100.0 6.6E-35 1.4E-39 309.1 19.2 244 403-663 5-259 (280)
238 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.2E-35 1.6E-39 308.5 19.3 241 405-664 6-251 (277)
239 cd08221 STKc_Nek9 Catalytic do 100.0 2.7E-34 5.8E-39 299.9 23.0 243 404-662 1-249 (256)
240 cd05112 PTKc_Itk Catalytic dom 100.0 1.7E-34 3.7E-39 301.4 21.4 246 404-667 5-254 (256)
241 cd06638 STKc_myosinIIIA Cataly 100.0 8.5E-35 1.9E-39 309.0 19.3 253 395-663 10-280 (286)
242 cd06652 STKc_MEKK2 Catalytic d 100.0 3.1E-34 6.8E-39 301.4 23.4 244 403-662 2-257 (265)
243 cd08217 STKc_Nek2 Catalytic do 100.0 2E-34 4.3E-39 301.1 21.6 247 404-662 1-258 (265)
244 cd05073 PTKc_Hck Catalytic dom 100.0 2.4E-34 5.2E-39 301.6 22.1 249 403-669 6-258 (260)
245 smart00219 TyrKc Tyrosine kina 100.0 2E-34 4.4E-39 300.1 21.4 242 406-662 2-253 (258)
246 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.3E-34 4.9E-39 303.4 21.9 253 405-671 1-272 (273)
247 KOG0599 Phosphorylase kinase g 100.0 1.5E-35 3.3E-40 295.1 12.0 243 402-665 16-282 (411)
248 cd06640 STKc_MST4 Catalytic do 100.0 2.9E-34 6.2E-39 304.1 22.3 241 404-664 5-251 (277)
249 PHA03211 serine/threonine kina 100.0 1.2E-34 2.5E-39 328.1 20.4 245 402-662 168-451 (461)
250 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-34 5.1E-39 306.8 21.6 255 392-662 11-283 (291)
251 KOG1094 Discoidin domain recep 100.0 2.6E-35 5.6E-40 318.7 14.1 251 405-666 540-800 (807)
252 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.2E-34 4.7E-39 305.5 21.0 252 394-662 7-275 (282)
253 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.2E-34 7E-39 302.4 22.1 244 410-668 2-266 (268)
254 cd05041 PTKc_Fes_like Catalyti 100.0 3.9E-34 8.6E-39 297.7 22.4 242 410-668 2-249 (251)
255 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.2E-34 2.7E-39 310.9 19.0 249 403-663 6-283 (301)
256 KOG0577 Serine/threonine prote 100.0 1.5E-35 3.2E-40 320.2 11.8 236 405-662 28-274 (948)
257 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.1E-34 6.8E-39 305.5 22.0 248 403-662 1-262 (287)
258 cd05580 STKc_PKA Catalytic dom 100.0 3.1E-34 6.7E-39 306.1 21.8 236 404-661 2-244 (290)
259 PHA03209 serine/threonine kina 100.0 1.3E-34 2.7E-39 319.1 19.4 187 403-608 66-256 (357)
260 cd06632 STKc_MEKK1_plant Catal 100.0 3.3E-34 7.2E-39 298.8 21.5 239 405-662 2-251 (258)
261 cd05574 STKc_phototropin_like 100.0 4.1E-34 8.8E-39 308.8 22.8 248 404-662 2-281 (316)
262 cd06659 STKc_PAK6 Catalytic do 100.0 1.6E-34 3.4E-39 309.9 19.3 235 408-662 26-267 (297)
263 KOG0690 Serine/threonine prote 100.0 1.8E-35 3.9E-40 300.5 11.2 250 403-671 168-424 (516)
264 cd06623 PKc_MAPKK_plant_like C 100.0 4.1E-34 9E-39 299.1 21.8 247 403-664 1-254 (264)
265 cd08218 STKc_Nek1 Catalytic do 100.0 4E-34 8.6E-39 298.6 21.6 245 404-664 1-251 (256)
266 cd06605 PKc_MAPKK Catalytic do 100.0 1.6E-34 3.5E-39 302.9 18.7 245 404-662 2-253 (265)
267 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.6E-34 1.2E-38 298.6 22.4 249 403-662 1-260 (267)
268 cd06630 STKc_MEKK1 Catalytic d 100.0 4.8E-34 1E-38 299.8 21.9 248 404-662 1-260 (268)
269 KOG0986 G protein-coupled rece 100.0 1.9E-35 4.1E-40 312.2 11.1 260 389-662 170-437 (591)
270 cd05609 STKc_MAST Catalytic do 100.0 6.1E-34 1.3E-38 306.2 23.0 246 403-661 1-265 (305)
271 cd08220 STKc_Nek8 Catalytic do 100.0 5.8E-34 1.2E-38 296.9 21.5 244 404-664 1-251 (256)
272 cd05578 STKc_Yank1 Catalytic d 100.0 2.9E-34 6.2E-39 300.3 19.3 240 404-660 1-247 (258)
273 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.9E-34 4.1E-39 306.1 18.1 247 404-662 2-279 (286)
274 cd06658 STKc_PAK5 Catalytic do 100.0 2E-34 4.3E-39 308.4 18.4 240 408-664 27-270 (292)
275 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.3E-34 9.4E-39 303.1 20.6 247 404-662 2-279 (286)
276 cd08528 STKc_Nek10 Catalytic d 100.0 6.8E-34 1.5E-38 299.3 22.0 243 404-662 1-262 (269)
277 cd05577 STKc_GRK Catalytic dom 100.0 5.3E-34 1.2E-38 302.0 21.1 238 411-662 1-245 (277)
278 KOG0584 Serine/threonine prote 100.0 3.8E-35 8.2E-40 322.5 12.6 232 410-664 47-294 (632)
279 cd06608 STKc_myosinIII_like Ca 100.0 3.4E-34 7.4E-39 301.3 19.0 248 400-663 3-269 (275)
280 KOG0033 Ca2+/calmodulin-depend 100.0 6.5E-36 1.4E-40 293.9 5.5 246 403-664 11-265 (355)
281 cd08227 PK_STRAD_alpha Pseudok 100.0 4.7E-34 1E-38 310.4 20.5 252 408-663 3-304 (327)
282 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-33 2.2E-38 296.4 22.4 246 404-662 1-257 (264)
283 cd07860 STKc_CDK2_3 Catalytic 100.0 4.1E-34 8.8E-39 303.5 19.6 248 404-662 1-277 (284)
284 cd06641 STKc_MST3 Catalytic do 100.0 9.9E-34 2.2E-38 300.0 22.0 239 405-662 6-249 (277)
285 cd07839 STKc_CDK5 Catalytic do 100.0 6E-34 1.3E-38 302.2 19.6 247 404-662 1-277 (284)
286 cd06614 STKc_PAK Catalytic dom 100.0 1.2E-33 2.5E-38 300.7 21.7 245 400-662 16-266 (286)
287 cd05122 PKc_STE Catalytic doma 100.0 1.5E-33 3.2E-38 291.5 21.9 242 405-662 2-247 (253)
288 cd05572 STKc_cGK_PKG Catalytic 100.0 1.3E-33 2.8E-38 296.0 21.7 235 411-662 1-243 (262)
289 cd06647 STKc_PAK_I Catalytic d 100.0 8.9E-34 1.9E-38 303.4 20.8 243 403-664 19-267 (293)
290 cd06917 STKc_NAK1_like Catalyt 100.0 8.2E-34 1.8E-38 300.0 20.2 241 404-663 2-252 (277)
291 cd08225 STKc_Nek5 Catalytic do 100.0 9.3E-34 2E-38 295.5 20.3 243 404-662 1-250 (257)
292 cd07841 STKc_CDK7 Catalytic do 100.0 8.5E-34 1.8E-38 303.4 20.4 244 404-662 1-278 (298)
293 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-33 2.6E-38 301.1 21.3 239 405-662 21-265 (285)
294 cd07832 STKc_CCRK Catalytic do 100.0 8.5E-34 1.8E-38 300.9 20.0 248 404-662 1-278 (286)
295 cd07836 STKc_Pho85 Catalytic d 100.0 9.1E-34 2E-38 300.5 20.2 249 404-662 1-277 (284)
296 cd07833 STKc_CDKL Catalytic do 100.0 7.9E-34 1.7E-38 301.4 19.6 248 404-662 2-281 (288)
297 cd07844 STKc_PCTAIRE_like Cata 100.0 1.3E-33 2.9E-38 300.8 21.3 248 403-662 5-284 (291)
298 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.2E-33 2.6E-38 297.9 20.6 243 404-662 2-265 (272)
299 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-33 3.3E-38 298.7 21.1 244 403-662 1-257 (283)
300 cd07835 STKc_CDK1_like Catalyt 100.0 1.1E-33 2.5E-38 299.9 20.0 247 405-662 1-276 (283)
301 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-33 3.1E-38 303.7 21.1 251 405-662 2-309 (316)
302 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.2E-33 4.7E-38 299.4 21.9 250 401-662 3-284 (291)
303 KOG0579 Ste20-like serine/thre 100.0 1.3E-34 2.8E-39 314.1 12.2 239 408-663 37-286 (1187)
304 PHA02882 putative serine/threo 100.0 1.8E-33 3.8E-38 301.4 20.9 254 403-666 12-291 (294)
305 cd06607 STKc_TAO Catalytic dom 100.0 2.8E-33 6.1E-38 301.3 22.5 240 403-664 15-265 (307)
306 cd06606 STKc_MAPKKK Catalytic 100.0 3E-33 6.6E-38 290.3 21.9 246 404-664 1-255 (260)
307 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.4E-33 9.6E-38 292.7 22.6 244 403-662 2-257 (264)
308 cd05579 STKc_MAST_like Catalyt 100.0 3E-33 6.5E-38 292.2 20.9 238 411-661 1-249 (265)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 2E-33 4.4E-38 299.9 19.8 249 403-663 5-287 (293)
310 cd05613 STKc_MSK1_N N-terminal 100.0 4.1E-33 8.9E-38 297.1 21.5 244 404-661 1-258 (290)
311 KOG0596 Dual specificity; seri 100.0 6.7E-34 1.5E-38 307.0 15.3 244 403-662 361-623 (677)
312 KOG0608 Warts/lats-like serine 100.0 4.2E-33 9.1E-38 303.1 21.2 241 404-653 630-914 (1034)
313 cd06627 STKc_Cdc7_like Catalyt 100.0 6.6E-33 1.4E-37 288.0 21.9 241 404-662 1-247 (254)
314 cd08215 STKc_Nek Catalytic dom 100.0 5.9E-33 1.3E-37 288.5 21.3 244 404-662 1-251 (258)
315 cd07831 STKc_MOK Catalytic dom 100.0 7.3E-33 1.6E-37 293.1 22.2 244 405-662 1-275 (282)
316 cd07849 STKc_ERK1_2_like Catal 100.0 2.2E-33 4.8E-38 306.2 18.8 250 402-662 4-288 (336)
317 PLN00113 leucine-rich repeat r 100.0 4.5E-33 9.8E-38 344.9 23.7 249 403-673 690-953 (968)
318 cd07837 STKc_CdkB_plant Cataly 100.0 5.3E-33 1.2E-37 296.6 21.0 247 403-662 1-287 (295)
319 cd07865 STKc_CDK9 Catalytic do 100.0 7.2E-33 1.6E-37 297.3 22.0 252 403-662 12-303 (310)
320 cd06635 STKc_TAO1 Catalytic do 100.0 1.1E-32 2.3E-37 298.5 23.3 236 405-662 27-273 (317)
321 cd05633 STKc_GRK3 Catalytic do 100.0 5.4E-33 1.2E-37 295.2 20.6 232 410-659 1-243 (279)
322 PHA03390 pk1 serine/threonine- 100.0 1E-32 2.2E-37 291.2 22.5 235 402-660 13-255 (267)
323 KOG0667 Dual-specificity tyros 100.0 2.5E-33 5.3E-38 311.1 18.5 192 404-610 187-390 (586)
324 cd06616 PKc_MKK4 Catalytic dom 100.0 3E-33 6.4E-38 297.7 18.5 245 404-664 5-265 (288)
325 cd08216 PK_STRAD Pseudokinase 100.0 7.2E-33 1.6E-37 298.6 21.4 251 408-662 7-291 (314)
326 cd06618 PKc_MKK7 Catalytic dom 100.0 7.3E-33 1.6E-37 296.4 21.3 244 403-664 15-271 (296)
327 KOG0696 Serine/threonine prote 100.0 7E-34 1.5E-38 296.4 12.8 238 404-660 350-595 (683)
328 cd07840 STKc_CDK9_like Catalyt 100.0 6.9E-33 1.5E-37 293.5 20.5 247 405-662 1-280 (287)
329 KOG0574 STE20-like serine/thre 100.0 3.2E-35 6.9E-40 295.9 2.2 241 405-662 35-279 (502)
330 cd07850 STKc_JNK Catalytic dom 100.0 7.5E-33 1.6E-37 304.3 21.1 248 401-664 14-309 (353)
331 cd07855 STKc_ERK5 Catalytic do 100.0 5.7E-33 1.2E-37 302.8 19.9 253 403-664 5-292 (334)
332 KOG4250 TANK binding protein k 100.0 7.8E-34 1.7E-38 315.6 13.2 194 406-609 16-225 (732)
333 cd05581 STKc_PDK1 Catalytic do 100.0 9.2E-33 2E-37 291.5 20.5 246 403-661 1-268 (280)
334 KOG0612 Rho-associated, coiled 100.0 6.2E-34 1.3E-38 327.9 12.4 241 401-659 73-328 (1317)
335 cd05583 STKc_MSK_N N-terminal 100.0 9.2E-33 2E-37 294.1 20.7 245 404-662 1-259 (288)
336 cd08530 STKc_CNK2-like Catalyt 100.0 1.5E-32 3.2E-37 286.1 21.1 242 404-662 1-249 (256)
337 cd06657 STKc_PAK4 Catalytic do 100.0 9.1E-33 2E-37 295.6 20.1 234 409-662 26-266 (292)
338 PHA03210 serine/threonine kina 100.0 3.5E-33 7.6E-38 320.8 17.9 254 402-664 147-452 (501)
339 cd05606 STKc_beta_ARK Catalyti 100.0 1.8E-32 3.9E-37 291.0 21.5 232 410-659 1-243 (278)
340 cd05611 STKc_Rim15_like Cataly 100.0 2.2E-32 4.7E-37 286.4 21.7 230 409-661 2-243 (260)
341 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-32 2.8E-37 300.2 20.7 254 402-664 6-293 (337)
342 cd05118 STKc_CMGC Catalytic do 100.0 1.7E-32 3.6E-37 290.2 20.9 247 405-663 1-277 (283)
343 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-32 2.8E-37 294.6 20.2 248 401-662 5-295 (302)
344 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-32 2.9E-37 291.4 19.9 247 405-663 1-277 (283)
345 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-32 4E-37 295.0 21.3 249 402-662 6-286 (309)
346 PLN00009 cyclin-dependent kina 100.0 1.2E-32 2.7E-37 294.0 19.2 251 403-664 2-282 (294)
347 KOG0666 Cyclin C-dependent kin 100.0 1.5E-33 3.3E-38 285.5 11.4 200 403-609 24-241 (438)
348 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-32 3.9E-37 294.3 20.0 255 402-662 7-304 (311)
349 cd08222 STKc_Nek11 Catalytic d 100.0 2.3E-32 4.9E-37 286.2 20.3 242 405-662 2-253 (260)
350 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.5E-32 3.2E-37 301.1 19.5 256 390-662 4-296 (345)
351 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-32 3E-37 300.2 18.8 250 402-664 4-289 (337)
352 KOG0604 MAP kinase-activated p 100.0 3.1E-33 6.7E-38 282.3 12.4 241 403-662 61-318 (400)
353 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-32 3.4E-37 300.7 19.2 247 401-664 13-296 (343)
354 cd07834 STKc_MAPK Catalytic do 100.0 2.7E-32 5.9E-37 296.4 20.7 250 404-663 1-286 (330)
355 cd07879 STKc_p38delta_MAPK13 C 100.0 1.7E-32 3.6E-37 300.3 18.9 245 402-664 14-295 (342)
356 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.1E-32 8.9E-37 295.6 21.5 249 397-662 4-284 (328)
357 cd08226 PK_STRAD_beta Pseudoki 100.0 3E-32 6.6E-37 296.3 20.4 251 410-664 5-306 (328)
358 cd06633 STKc_TAO3 Catalytic do 100.0 8.1E-32 1.8E-36 291.1 22.8 237 405-663 23-270 (313)
359 KOG0607 MAP kinase-interacting 100.0 1.6E-32 3.4E-37 278.9 16.1 257 395-662 75-357 (463)
360 KOG4645 MAPKKK (MAP kinase kin 100.0 6.3E-34 1.4E-38 331.6 6.6 251 398-661 1230-1489(1509)
361 cd06634 STKc_TAO2 Catalytic do 100.0 5.4E-32 1.2E-36 291.7 21.1 236 405-662 17-263 (308)
362 KOG1035 eIF-2alpha kinase GCN2 100.0 4.3E-33 9.4E-38 323.4 13.3 249 403-664 479-869 (1351)
363 cd05123 STKc_AGC Catalytic dom 100.0 7.8E-32 1.7E-36 279.8 21.5 233 411-662 1-240 (250)
364 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.1E-32 9E-37 297.2 20.3 249 403-662 5-296 (342)
365 KOG0586 Serine/threonine prote 100.0 1.1E-32 2.5E-37 302.8 15.5 243 400-665 53-305 (596)
366 cd07838 STKc_CDK4_6_like Catal 100.0 1E-31 2.2E-36 284.9 22.1 240 405-662 1-280 (287)
367 cd07857 STKc_MPK1 Catalytic do 100.0 9.4E-32 2E-36 292.9 21.8 252 404-664 1-290 (332)
368 cd07829 STKc_CDK_like Catalyti 100.0 4.3E-32 9.3E-37 286.9 18.5 246 405-662 1-275 (282)
369 KOG0983 Mitogen-activated prot 100.0 1.6E-32 3.4E-37 273.9 12.8 236 410-662 99-345 (391)
370 KOG0614 cGMP-dependent protein 100.0 4.3E-33 9.2E-38 297.2 9.3 239 405-661 422-667 (732)
371 PTZ00024 cyclin-dependent prot 100.0 1.3E-31 2.7E-36 292.1 20.7 245 408-662 14-309 (335)
372 KOG3653 Transforming growth fa 100.0 4.7E-32 1E-36 288.8 16.6 246 405-661 212-494 (534)
373 KOG1025 Epidermal growth facto 100.0 3.3E-32 7.2E-37 303.8 15.5 249 406-671 699-957 (1177)
374 cd05576 STKc_RPK118_like Catal 100.0 2.7E-31 5.8E-36 275.2 18.4 219 414-663 4-226 (237)
375 cd07851 STKc_p38 Catalytic dom 100.0 1.9E-31 4.1E-36 292.0 18.0 246 400-662 12-294 (343)
376 KOG2052 Activin A type IB rece 100.0 2.1E-31 4.6E-36 281.9 17.4 257 404-672 212-504 (513)
377 cd05610 STKc_MASTL Catalytic d 100.0 3.7E-31 8E-36 313.5 21.6 143 403-551 4-153 (669)
378 KOG0200 Fibroblast/platelet-de 100.0 6.1E-31 1.3E-35 307.5 20.5 254 404-671 297-579 (609)
379 KOG0587 Traf2- and Nck-interac 100.0 5.8E-31 1.2E-35 297.6 18.5 246 400-662 16-278 (953)
380 KOG0695 Serine/threonine prote 100.0 2.3E-31 5E-36 271.3 13.5 246 402-659 249-503 (593)
381 KOG4236 Serine/threonine prote 100.0 1.8E-31 4E-36 285.2 10.2 238 408-662 569-815 (888)
382 smart00220 S_TKc Serine/Threon 100.0 4.5E-30 9.8E-35 263.2 19.6 230 415-663 1-238 (244)
383 KOG0603 Ribosomal protein S6 k 100.0 7.3E-31 1.6E-35 290.0 14.3 234 402-663 321-560 (612)
384 KOG1006 Mitogen-activated prot 100.0 3.8E-32 8.3E-37 270.4 2.5 236 409-662 70-323 (361)
385 KOG0669 Cyclin T-dependent kin 100.0 1.7E-31 3.6E-36 263.8 3.2 250 405-662 19-311 (376)
386 PLN03224 probable serine/threo 100.0 5.8E-29 1.3E-33 282.0 21.9 254 401-662 143-496 (507)
387 KOG0671 LAMMER dual specificit 100.0 9.5E-30 2.1E-34 265.4 11.7 248 402-664 88-404 (415)
388 PLN03225 Serine/threonine-prot 100.0 7.1E-29 1.5E-33 287.5 19.5 250 401-662 130-446 (566)
389 KOG1027 Serine/threonine prote 100.0 2.7E-30 5.8E-35 291.0 7.0 244 405-664 511-765 (903)
390 KOG0662 Cyclin-dependent kinas 100.0 3.5E-29 7.7E-34 236.1 13.3 195 404-610 3-205 (292)
391 KOG0984 Mitogen-activated prot 100.0 8E-29 1.7E-33 238.8 10.7 193 407-609 50-253 (282)
392 KOG0664 Nemo-like MAPK-related 100.0 4.7E-29 1E-33 248.7 5.1 198 404-613 54-263 (449)
393 KOG0668 Casein kinase II, alph 99.9 6.2E-28 1.3E-32 235.7 12.3 243 402-663 37-319 (338)
394 cd00180 PKc Catalytic domain o 99.9 1.2E-26 2.6E-31 231.4 20.8 203 411-662 1-210 (215)
395 KOG1290 Serine/threonine prote 99.9 7.3E-27 1.6E-31 249.6 18.7 129 402-535 77-221 (590)
396 KOG1024 Receptor-like protein 99.9 3.2E-27 7E-32 245.9 13.5 253 405-671 286-555 (563)
397 KOG0670 U4/U6-associated splic 99.9 1.3E-27 2.7E-32 256.2 10.5 197 400-609 429-636 (752)
398 KOG0576 Mitogen-activated prot 99.9 6.7E-28 1.5E-32 265.3 6.8 249 402-664 14-269 (829)
399 smart00221 STYKc Protein kinas 99.9 4.8E-26 1E-30 231.5 18.7 196 405-610 1-202 (225)
400 KOG1152 Signal transduction se 99.9 9E-27 2E-31 252.6 9.0 193 403-609 561-770 (772)
401 KOG0665 Jun-N-terminal kinase 99.9 3.8E-26 8.3E-31 233.6 10.4 243 403-662 17-306 (369)
402 PLN00181 protein SPA1-RELATED; 99.9 2.6E-25 5.6E-30 269.5 10.8 197 454-664 28-263 (793)
403 KOG1345 Serine/threonine kinas 99.9 1.8E-25 3.9E-30 223.5 7.3 233 403-657 24-275 (378)
404 KOG1167 Serine/threonine prote 99.9 4.9E-25 1.1E-29 233.3 10.0 200 399-609 32-279 (418)
405 smart00750 KIND kinase non-cat 99.9 6.8E-24 1.5E-28 209.1 15.1 159 481-669 1-167 (176)
406 KOG1164 Casein kinase (serine/ 99.9 8.6E-23 1.9E-27 221.8 20.3 258 404-670 19-296 (322)
407 PRK09188 serine/threonine prot 99.9 2.5E-23 5.4E-28 226.9 14.2 171 397-582 12-194 (365)
408 COG0515 SPS1 Serine/threonine 99.9 1.1E-21 2.5E-26 207.2 21.9 255 405-666 2-275 (384)
409 KOG0195 Integrin-linked kinase 99.9 5.6E-23 1.2E-27 205.3 8.4 262 383-672 177-447 (448)
410 KOG1163 Casein kinase (serine/ 99.9 2.2E-21 4.7E-26 191.5 14.2 249 402-661 14-275 (341)
411 KOG1165 Casein kinase (serine/ 99.9 7.3E-21 1.6E-25 195.5 18.2 249 402-661 27-290 (449)
412 cd05147 RIO1_euk RIO kinase fa 99.8 2.4E-20 5.3E-25 186.9 11.2 138 409-553 3-168 (190)
413 PRK10359 lipopolysaccharide co 99.8 1.4E-20 3.1E-25 191.8 9.4 170 401-603 29-217 (232)
414 PRK12274 serine/threonine prot 99.8 4.9E-20 1.1E-24 184.2 11.8 188 406-609 5-208 (218)
415 KOG1240 Protein kinase contain 99.8 1.1E-20 2.4E-25 218.3 7.8 244 404-662 24-287 (1431)
416 cd05145 RIO1_like RIO kinase f 99.8 1.4E-19 2.9E-24 181.7 14.2 139 409-554 3-169 (190)
417 KOG0590 Checkpoint kinase and 99.8 2E-20 4.3E-25 216.9 5.9 247 407-662 322-581 (601)
418 KOG0603 Ribosomal protein S6 k 99.8 1.6E-20 3.4E-25 208.4 4.4 222 411-661 2-233 (612)
419 PRK10345 hypothetical protein; 99.8 2.1E-18 4.5E-23 175.1 12.7 135 405-549 4-156 (210)
420 PF14531 Kinase-like: Kinase-l 99.7 1.2E-17 2.6E-22 175.3 13.3 229 405-657 14-288 (288)
421 KOG1023 Natriuretic peptide re 99.7 6.6E-18 1.4E-22 187.8 11.4 201 452-662 1-216 (484)
422 KOG0606 Microtubule-associated 99.7 3.9E-18 8.4E-23 197.6 8.4 213 401-661 81-307 (1205)
423 PRK14879 serine/threonine prot 99.7 3.5E-17 7.5E-22 166.4 13.6 132 409-551 2-143 (211)
424 TIGR03724 arch_bud32 Kae1-asso 99.7 3.1E-17 6.7E-22 165.3 12.2 127 411-551 2-138 (199)
425 KOG1166 Mitotic checkpoint ser 99.7 8E-17 1.7E-21 190.6 14.4 195 397-605 692-900 (974)
426 smart00090 RIO RIO-like kinase 99.7 8.3E-17 1.8E-21 166.9 12.3 141 405-553 30-199 (237)
427 PRK09605 bifunctional UGMP fam 99.7 6.7E-17 1.5E-21 187.5 12.2 143 394-551 324-476 (535)
428 KOG1033 eIF-2alpha kinase PEK/ 99.7 6.7E-18 1.5E-22 184.4 3.5 173 471-661 331-507 (516)
429 KOG4158 BRPK/PTEN-induced prot 99.7 2.1E-16 4.6E-21 166.0 13.2 199 456-668 274-511 (598)
430 cd05144 RIO2_C RIO kinase fami 99.7 2E-16 4.3E-21 159.6 12.3 137 404-554 16-177 (198)
431 cd01989 STK_N The N-terminal d 99.6 4E-15 8.6E-20 142.4 13.9 117 1-125 30-146 (146)
432 cd05120 APH_ChoK_like Aminogly 99.6 3.8E-15 8.1E-20 141.3 12.4 132 408-551 3-138 (155)
433 cd05119 RIO RIO kinase family, 99.6 4.1E-15 8.8E-20 148.2 11.6 137 408-554 2-166 (187)
434 PF04564 U-box: U-box domain; 99.6 5.8E-16 1.3E-20 129.9 2.6 69 689-757 1-70 (73)
435 PRK01723 3-deoxy-D-manno-octul 99.6 1.7E-14 3.7E-19 149.9 13.2 133 408-551 36-191 (239)
436 KOG0590 Checkpoint kinase and 99.5 7.8E-15 1.7E-19 170.5 -0.5 248 403-663 20-283 (601)
437 TIGR01982 UbiB 2-polyprenylphe 99.4 1.1E-12 2.4E-17 147.9 12.4 137 409-553 123-308 (437)
438 cd05151 ChoK Choline Kinase (C 99.4 9.3E-13 2E-17 128.8 9.9 130 409-551 4-136 (170)
439 KOG1266 Protein kinase [Signal 99.3 9.1E-13 2E-17 136.2 6.0 201 450-664 119-329 (458)
440 KOG0601 Cyclin-dependent kinas 99.2 8.5E-12 1.8E-16 139.4 6.4 243 404-661 115-374 (524)
441 PRK04750 ubiB putative ubiquin 99.2 5.4E-11 1.2E-15 136.0 11.9 142 402-554 119-316 (537)
442 smart00504 Ubox Modified RING 99.1 4.3E-11 9.3E-16 97.5 5.2 62 693-754 2-63 (63)
443 COG3642 Mn2+-dependent serine/ 99.1 3.2E-10 6.9E-15 110.1 11.9 128 410-551 3-140 (204)
444 cd05146 RIO3_euk RIO kinase fa 99.1 4E-10 8.8E-15 112.8 13.1 136 409-553 3-175 (197)
445 KOG1243 Protein kinase [Genera 99.1 1.1E-09 2.3E-14 123.8 17.2 162 425-604 36-199 (690)
446 cd05154 ACAD10_11_like Acyl-Co 99.1 3.4E-10 7.5E-15 115.3 12.1 139 409-551 4-206 (223)
447 KOG0606 Microtubule-associated 99.1 2.4E-11 5.3E-16 142.0 3.4 248 401-661 802-1084(1205)
448 COG4248 Uncharacterized protei 99.1 3E-09 6.5E-14 113.9 18.1 258 406-678 14-307 (637)
449 PRK15456 universal stress prot 99.1 9E-10 1.9E-14 104.9 10.8 109 1-123 34-142 (142)
450 KOG0601 Cyclin-dependent kinas 99.0 1.5E-10 3.2E-15 129.6 5.6 236 402-662 264-510 (524)
451 KOG3087 Serine/threonine prote 99.0 4.5E-09 9.7E-14 101.7 13.4 141 407-551 11-165 (229)
452 PRK15005 universal stress prot 98.9 8.8E-09 1.9E-13 98.1 10.3 81 38-123 64-144 (144)
453 cd01987 USP_OKCHK USP domain i 98.8 1.2E-08 2.6E-13 94.5 9.1 77 41-122 46-123 (124)
454 cd01988 Na_H_Antiporter_C The 98.8 2.4E-08 5.2E-13 93.2 10.7 81 39-122 51-131 (132)
455 PRK15123 lipopolysaccharide co 98.8 1.7E-07 3.7E-12 98.8 15.6 133 415-551 34-194 (268)
456 KOG3741 Poly(A) ribonuclease s 98.8 2.1E-07 4.6E-12 102.4 16.5 163 417-605 290-473 (655)
457 PF01163 RIO1: RIO1 family; I 98.7 7.1E-08 1.5E-12 96.2 11.2 125 418-553 1-157 (188)
458 PRK09982 universal stress prot 98.7 7.9E-08 1.7E-12 91.7 9.2 106 1-124 34-139 (142)
459 PRK10116 universal stress prot 98.7 8.7E-08 1.9E-12 91.0 9.3 105 1-123 34-138 (142)
460 PRK15118 universal stress glob 98.6 2.1E-07 4.5E-12 88.7 8.4 80 35-123 59-138 (144)
461 PF00582 Usp: Universal stress 98.5 4.5E-07 9.7E-12 84.3 10.0 70 51-123 71-140 (140)
462 cd00293 USP_Like Usp: Universa 98.5 6.5E-07 1.4E-11 82.3 10.3 84 35-122 47-130 (130)
463 KOG2137 Protein kinase [Signal 98.5 4.8E-08 1E-12 111.1 2.2 150 506-661 106-260 (700)
464 PRK11175 universal stress prot 98.5 8.6E-07 1.9E-11 95.5 11.3 90 33-125 58-147 (305)
465 PF06293 Kdo: Lipopolysacchari 98.4 9.4E-07 2E-11 89.9 10.0 105 442-552 55-171 (206)
466 PF12260 PIP49_C: Protein-kina 98.4 4.3E-06 9.4E-11 83.6 14.2 106 446-553 7-113 (188)
467 PRK11175 universal stress prot 98.4 1.3E-06 2.7E-11 94.2 10.5 84 34-123 216-299 (305)
468 PRK09902 hypothetical protein; 98.4 5.5E-06 1.2E-10 83.5 14.0 136 411-551 26-179 (216)
469 COG0661 AarF Predicted unusual 98.4 1.7E-06 3.7E-11 98.7 11.5 138 409-554 131-317 (517)
470 COG0478 RIO-like serine/threon 98.3 4E-06 8.7E-11 86.5 10.9 134 405-551 93-251 (304)
471 PF01636 APH: Phosphotransfera 98.3 4.2E-06 9.2E-11 85.5 11.1 141 409-551 3-197 (239)
472 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 8.2E-06 1.8E-10 84.2 12.6 136 409-550 7-181 (226)
473 COG0589 UspA Universal stress 98.2 1.2E-05 2.5E-10 76.6 11.0 87 35-124 65-152 (154)
474 PF06176 WaaY: Lipopolysacchar 98.2 9.1E-06 2E-10 82.3 10.1 135 402-551 30-183 (229)
475 KOG1235 Predicted unusual prot 98.1 1.2E-05 2.6E-10 91.7 10.7 139 409-554 167-357 (538)
476 cd05150 APH Aminoglycoside 3'- 98.1 2.2E-05 4.8E-10 81.7 11.8 137 411-550 6-192 (244)
477 KOG4642 Chaperone-dependent E3 98.1 3.2E-06 6.9E-11 84.7 4.4 71 686-756 205-276 (284)
478 cd05155 APH_ChoK_like_1 Unchar 98.0 3.7E-05 8E-10 79.7 11.2 138 409-551 3-194 (235)
479 PLN02876 acyl-CoA dehydrogenas 97.9 8.1E-05 1.8E-09 91.1 14.4 146 408-553 43-259 (822)
480 TIGR02721 ycfN_thiK thiamine k 97.9 5.5E-05 1.2E-09 79.4 9.3 139 410-551 3-175 (256)
481 COG1718 RIO1 Serine/threonine 97.8 0.00013 2.8E-09 74.8 10.8 134 410-553 55-217 (268)
482 COG2112 Predicted Ser/Thr prot 97.8 0.0001 2.2E-09 71.7 9.4 128 407-551 26-155 (201)
483 PRK09550 mtnK methylthioribose 97.8 0.0003 6.5E-09 78.3 14.3 74 409-482 32-117 (401)
484 cd05157 ETNK_euk Ethanolamine 97.8 0.00015 3.3E-09 74.8 11.2 139 409-550 4-200 (235)
485 KOG0576 Mitogen-activated prot 97.7 6.3E-06 1.4E-10 93.1 -0.0 178 410-609 249-431 (829)
486 PRK10593 hypothetical protein; 97.7 0.00034 7.4E-09 75.3 12.7 73 409-483 20-100 (297)
487 PRK05231 homoserine kinase; Pr 97.6 0.00092 2E-08 72.5 14.0 158 390-550 4-216 (319)
488 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.00096 2.1E-08 67.3 12.6 127 407-545 5-165 (199)
489 PF13095 FTA2: Kinetochore Sim 97.5 0.00085 1.8E-08 67.3 11.4 123 403-549 37-206 (207)
490 KOG1826 Ras GTPase activating 97.4 5.5E-05 1.2E-09 92.6 1.1 159 445-609 1276-1441(2724)
491 cd05156 ChoK_euk Choline Kinas 97.3 0.001 2.2E-08 71.6 10.2 139 409-550 4-212 (302)
492 cd05153 HomoserineK_II Homoser 97.3 0.0017 3.6E-08 69.6 11.7 140 408-550 19-204 (296)
493 TIGR00938 thrB_alt homoserine 97.3 0.0041 8.8E-08 67.2 14.4 140 409-550 28-216 (307)
494 PLN02756 S-methyl-5-thioribose 97.2 0.0023 5.1E-08 71.1 12.0 73 408-480 37-119 (418)
495 PLN02236 choline kinase 97.1 0.0038 8.1E-08 68.7 11.9 139 409-550 42-230 (344)
496 COG3173 Predicted aminoglycosi 97.0 0.0058 1.3E-07 65.9 11.8 139 414-553 36-230 (321)
497 KOG1035 eIF-2alpha kinase GCN2 96.9 0.0019 4.1E-08 78.3 8.0 188 446-662 230-430 (1351)
498 TIGR01767 MTRK 5-methylthiorib 96.8 0.011 2.3E-07 64.8 11.7 72 410-481 2-85 (370)
499 PRK12652 putative monovalent c 96.7 0.0058 1.3E-07 67.0 8.9 52 40-91 58-122 (357)
500 PRK10490 sensor protein KdpD; 96.7 0.0051 1.1E-07 76.1 9.1 75 44-124 300-374 (895)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-51 Score=447.94 Aligned_cols=274 Identities=43% Similarity=0.752 Sum_probs=236.0
Q ss_pred cccCCCHHHHHHhhcCCccceeeccCCcEEEEEEEECC-eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccc
Q 004388 389 RYRNLTWEEIESATLSFSENLRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGAC 467 (757)
Q Consensus 389 ~~~~~~~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~ 467 (757)
..+.|++.++..||++|+..+.||+||||.||+|...+ +.||||.+.........+|.+|+++|.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 46779999999999999999999999999999999987 79999988765543145599999999999999999999999
Q ss_pred cCC---ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEe
Q 004388 468 PDH---GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIG 544 (757)
Q Consensus 468 ~~~---~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~ 544 (757)
.+. .+||||||++|+|.++|+..... +++|..|++||.++|.||+|||...+++||||||||+|||||.++.+||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 754 58999999999999999876654 79999999999999999999999887899999999999999999999999
Q ss_pred eecCccccCC-CCCCccccccccCC-cccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccc---------cch
Q 004388 545 DVGLSTMLNS-DPSFVSTTYKNTGP-VGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAI---------THK 613 (757)
Q Consensus 545 DFGla~~~~~-~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~---------~~~ 613 (757)
|||+|+..+. .... ... .||.+|+||||..++.++.|+|||||||+|+||+||++|.+. ..+
T Consensus 220 DFGLa~~~~~~~~~~-------~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w 292 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSV-------STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW 292 (361)
T ss_pred CccCcccCCccccce-------eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence 9999976553 2111 111 799999999999999999999999999999999999988863 233
Q ss_pred hhhhhchhhHHHHhhhhcC--CCCh-hHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 614 VETAIDEDNLAEILDAQAG--DWPI-KETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 614 ~~~~~~~~~l~~~ld~~~~--~~p~-~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
....+..+.+.+++|+... .++. .....+..++.+|++.+|++||+|.+ |+..|+.+
T Consensus 293 ~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~-Vv~~L~~~ 352 (361)
T KOG1187|consen 293 AKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQ-VVKELEGI 352 (361)
T ss_pred HHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHH-HHHHHHhh
Confidence 3455666788999999863 5554 57888999999999999999999985 66666444
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-46 Score=403.18 Aligned_cols=251 Identities=33% Similarity=0.525 Sum_probs=211.1
Q ss_pred ceeeccCCcEEEEEEEECCeE-EEEEEEccCCchh--hHHHHHHHHHHHhcCCCceeeecccccCC---ceEEEEecCCC
Q 004388 408 NLRIGMGGYGTVYKGTFHHTF-AAVKVLQSKGNIQ--NKQFLQELEVLSKIRHPHLLLLLGACPDH---GCLVYEYMENG 481 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~~~-vAvK~l~~~~~~~--~~~f~~Ev~il~~l~Hpniv~l~g~~~~~---~~LV~Ey~~~g 481 (757)
...||.|+||+||+|.++++. ||||++....... .+.|.+|+.+|.+++|||||+|+|+|.+. .+||||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 345999999999999999998 9999997653222 56899999999999999999999999775 48999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC-ceEEeeecCccccCCCCCCcc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-VSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-~~KL~DFGla~~~~~~~~~~~ 560 (757)
+|.++|+.. ....+++..+++|+.|||.||.|||+.+| ||||||||+||||+.++ ++||+|||+++......
T Consensus 126 sL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---- 198 (362)
T KOG0192|consen 126 SLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---- 198 (362)
T ss_pred cHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc----
Confidence 999999875 34569999999999999999999999885 99999999999999998 99999999998765431
Q ss_pred ccccccCCcccccCCCccccc--cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHH-hhhhcCCCChh
Q 004388 561 TTYKNTGPVGTLCYIDPEYQR--TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEI-LDAQAGDWPIK 637 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~--~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~-ld~~~~~~p~~ 637 (757)
...+...||+.|||||++. ...|+.|+|||||||+||||+||+.||...+....+ ..+ ........|..
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~------~~v~~~~~Rp~~p~~ 270 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA------SAVVVGGLRPPIPKE 270 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH------HHHHhcCCCCCCCcc
Confidence 2234578999999999999 568999999999999999999999999755442211 111 12233455666
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHh
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEV 674 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~~ 674 (757)
.+..+..|+.+||..+|..||++. +++..|+.+...
T Consensus 271 ~~~~l~~l~~~CW~~dp~~RP~f~-ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 271 CPPHLSSLMERCWLVDPSRRPSFL-EIVSRLESIMSH 306 (362)
T ss_pred CCHHHHHHHHHhCCCCCCcCCCHH-HHHHHHHHHHHh
Confidence 889999999999999999999998 577777777653
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=377.32 Aligned_cols=240 Identities=31% Similarity=0.401 Sum_probs=201.0
Q ss_pred ceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC---ceEEEEecCCC
Q 004388 408 NLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH---GCLVYEYMENG 481 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~---~~LV~Ey~~~g 481 (757)
...||+|..|+|||+.++ +..+|+|++.... ....+++.+|++|+..++|||||.+||+|... .+|+||||++|
T Consensus 84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG 163 (364)
T KOG0581|consen 84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG 163 (364)
T ss_pred hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence 346999999999999997 5699999996543 44567899999999999999999999998543 47999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
||++++...+ .+++....+|+.+|++||.|||. .+ ||||||||+||||+..|.+||||||.++.+.+.
T Consensus 164 SLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----- 232 (364)
T KOG0581|consen 164 SLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----- 232 (364)
T ss_pred CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh-----
Confidence 9999987653 48999999999999999999996 66 999999999999999999999999999887654
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh-HH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK-ET 639 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~-~~ 639 (757)
...+.+||..|||||.+.+..|+.++||||||++++||.+|+.||......... -...+..+++...+..|.. .+
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~-~~~Ll~~Iv~~ppP~lP~~~fS 308 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD-IFELLCAIVDEPPPRLPEGEFS 308 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC-HHHHHHHHhcCCCCCCCcccCC
Confidence 225679999999999999999999999999999999999999999654110000 1123334444444555665 88
Q ss_pred HHHHHHHHHHhhccCCCCCccch
Q 004388 640 KELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+++..++..||+.||.+||++.+
T Consensus 309 ~ef~~FV~~CL~Kdp~~R~s~~q 331 (364)
T KOG0581|consen 309 PEFRSFVSCCLRKDPSERPSAKQ 331 (364)
T ss_pred HHHHHHHHHHhcCCcccCCCHHH
Confidence 99999999999999999999985
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-43 Score=386.39 Aligned_cols=243 Identities=28% Similarity=0.431 Sum_probs=206.0
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccC---CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSK---GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~---~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
..|...+.||+|||+.||.+++ .+..||+|++... .....+...+||+|.+.|.|||||+|+++|.|.. |||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4588889999999999999998 3669999998764 2345677899999999999999999999998765 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
|+|.+|+|..++.+. .++++.++..++.||+.||.|||+++ |||||||..||||+++.++||+|||||..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999988643 36999999999999999999999998 999999999999999999999999999988754
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
.. +..+.||||.|+|||++....++..+||||+|||||-||+|+|||.... ++. .+. .+....-..|
T Consensus 172 ~E------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-vke-----ty~-~Ik~~~Y~~P 238 (592)
T KOG0575|consen 172 GE------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-VKE-----TYN-KIKLNEYSMP 238 (592)
T ss_pred cc------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-HHH-----HHH-HHHhcCcccc
Confidence 32 3355799999999999999899999999999999999999999996332 111 111 1112223356
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
...+.+.++||.++|+.+|.+||++.+++
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVL 267 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 67888999999999999999999998644
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=371.19 Aligned_cols=241 Identities=30% Similarity=0.477 Sum_probs=195.5
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
..+|....+||.|+||+||+|+++ ++.||||.+... .....+.+..|+.+|+.|+|||||.|++++.... ||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 346778888999999999999985 569999998766 3344566789999999999999999999986544 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC------CceEEeeecCc
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN------LVSKIGDVGLS 549 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~------~~~KL~DFGla 549 (757)
|||.||+|.++|.+.+ .++..+...++.|||.||.+||.++ ||||||||.||||+.+ -.+||+|||+|
T Consensus 89 EyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999998876 3889999999999999999999998 9999999999999764 46899999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
+.+.+.. .....+|+|.|||||++..++|+.|+|+||+|+|||+|+||++||......+-.. .+..
T Consensus 163 R~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~-------~~~k 228 (429)
T KOG0595|consen 163 RFLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL-------YIKK 228 (429)
T ss_pred hhCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-------HHhc
Confidence 9987432 2345799999999999999999999999999999999999999997443322211 1111
Q ss_pred h---cCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 630 Q---AGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 630 ~---~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. ....+......+.+|+...+..++.+|-++.+
T Consensus 229 ~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~ 264 (429)
T KOG0595|consen 229 GNEIVPVLPAELSNPLRELLISLLQRNPKDRISFED 264 (429)
T ss_pred cccccCchhhhccCchhhhhhHHHhcCccccCchHH
Confidence 1 12223344555667777788888877776653
No 6
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-43 Score=367.16 Aligned_cols=240 Identities=27% Similarity=0.315 Sum_probs=201.5
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
..+|...+.||+|+||.||.++.. ++.+|+|++++.... ..+....|..||.+++||+||.|+..|++.. |||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 457999999999999999999875 459999999876433 3456788999999999999999999998765 999
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
+||+.||.|...|.+.+. +++..+.-++.+|+.||.|||+.+ ||||||||+|||||.+|+++|+|||||+..-.
T Consensus 104 ld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 999999999999987664 788888889999999999999988 99999999999999999999999999986543
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
... ...+.+||+.|||||++....|+..+|+|||||++||||||.+||...+... ....++.......
T Consensus 178 ~~~------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~------~~~~I~~~k~~~~ 245 (357)
T KOG0598|consen 178 DGD------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK------MYDKILKGKLPLP 245 (357)
T ss_pred CCC------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH------HHHHHhcCcCCCC
Confidence 322 1234799999999999999999999999999999999999999997544221 1222333323344
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCc
Q 004388 635 PIKETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
|.-.+.+..+++.+.+..+|++|-.
T Consensus 246 p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 246 PGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred CccCCHHHHHHHHHHhccCHHHhcC
Confidence 4457889999999999999999964
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-44 Score=355.74 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=202.7
Q ss_pred CCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeeccc-ccCC---ceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGA-CPDH---GCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~-~~~~---~~LV~ 475 (757)
+|.+..+||+|.||.||++.. ++..+|.|.++... ....+....|+.+|++|+|||||++++. +.+. .+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 467778899999999999875 57799999887553 3345668899999999999999999994 4333 37999
Q ss_pred EecCCCCHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCC-CCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 476 EYMENGSLEDRLYR-KNNTPPIPWFERYRIAWEVASALAFLHNTKP-KPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 476 Ey~~~gsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~-~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
|||.+|+|...+.. +....-+++..+++++.|++.||..+|+.-| ..|+||||||.||+|+.+|.+||+||||++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999998875 2334568999999999999999999999432 249999999999999999999999999999987
Q ss_pred CCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-cC
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-AG 632 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~ 632 (757)
.... ..+..+|||.||+||.+....|+.+|||||+||++|||+.-++||...+..+ +..-+... .+
T Consensus 180 s~~t------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~-------L~~KI~qgd~~ 246 (375)
T KOG0591|consen 180 SKTT------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS-------LCKKIEQGDYP 246 (375)
T ss_pred chhH------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH-------HHHHHHcCCCC
Confidence 6443 2356799999999999999999999999999999999999999997553221 11122211 12
Q ss_pred CCC-hhHHHHHHHHHHHHhhccCCCCCccchhhhh
Q 004388 633 DWP-IKETKELAALGLSCAELRRKDRPDLKNQVLP 666 (757)
Q Consensus 633 ~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~ 666 (757)
..| .-++..|..|+..|+..||..||+....|..
T Consensus 247 ~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 247 PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 223 5679999999999999999999996543333
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-42 Score=363.53 Aligned_cols=242 Identities=24% Similarity=0.354 Sum_probs=192.0
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchh-------hHHHHHHHHHHHhcCCCceeeecccccC--Cc
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQ-------NKQFLQELEVLSKIRHPHLLLLLGACPD--HG 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~-------~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~~ 471 (757)
+.|-..+.||.|+||.|-+|... +..||||+++...... .....+|++||++|+|||||+++++|.. ..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 35667788999999999999876 4599999997653222 2235799999999999999999999954 44
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC---CceEEeeecC
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN---LVSKIGDVGL 548 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~---~~~KL~DFGl 548 (757)
|||||||+||.|.+.+..++. +....-.-++.|++.||.|||+.| |+||||||+|||+..+ ..+||+|||+
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred EEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccch
Confidence 899999999999999976553 555566779999999999999998 9999999999999765 8899999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCC---CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHH
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL---ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
|+..... + .+.+.||||.|.|||++.++. +..++|+||+||+||-+|+|.+||..... ...+.+
T Consensus 326 AK~~g~~-s------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~------~~sl~e 392 (475)
T KOG0615|consen 326 AKVSGEG-S------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT------DPSLKE 392 (475)
T ss_pred hhccccc-e------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC------CccHHH
Confidence 9987632 2 346679999999999997664 34588999999999999999999963211 111122
Q ss_pred -HhhhhcCCCC---hhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 626 -ILDAQAGDWP---IKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 626 -~ld~~~~~~p---~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
++.......| ...+.+..+||.+||..||+.||++.+.
T Consensus 393 QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~ea 434 (475)
T KOG0615|consen 393 QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEA 434 (475)
T ss_pred HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHH
Confidence 2222212222 2467889999999999999999999863
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=373.26 Aligned_cols=249 Identities=29% Similarity=0.464 Sum_probs=205.1
Q ss_pred ccceeeccCCcEEEEEEEECCe-EEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCC
Q 004388 406 SENLRIGMGGYGTVYKGTFHHT-FAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGS 482 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~~~-~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gs 482 (757)
...+.||+|-||.||.|.++++ .||+|.++... ...+.|.+|++||++|+|+|||+|+|+|.... |||||||+.|+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 3456799999999999999977 99999998763 34577999999999999999999999997644 99999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccc
Q 004388 483 LEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTT 562 (757)
Q Consensus 483 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~ 562 (757)
|.++|.. .....+.....+.++.|||.|++||++++ +|||||-..||||++++.+||+|||||+...++. +.
T Consensus 288 Ll~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-Y~--- 359 (468)
T KOG0197|consen 288 LLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDE-YT--- 359 (468)
T ss_pred HHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCc-ee---
Confidence 9999986 23345888899999999999999999998 9999999999999999999999999999544332 11
Q ss_pred ccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 563 YKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
...+..-...|.|||.+..+.++.+||||||||+||||+| |+.|+......+ .+..+-.......|..++..
T Consensus 360 -~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e------v~~~le~GyRlp~P~~CP~~ 432 (468)
T KOG0197|consen 360 -ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE------VLELLERGYRLPRPEGCPDE 432 (468)
T ss_pred -ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH------HHHHHhccCcCCCCCCCCHH
Confidence 1123344667999999999999999999999999999998 888876443221 12222223345678889999
Q ss_pred HHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 642 LAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
+.+|+..||+.+|++|||+. .+...|+.+
T Consensus 433 vY~lM~~CW~~~P~~RPtF~-~L~~~l~~~ 461 (468)
T KOG0197|consen 433 VYELMKSCWHEDPEDRPTFE-TLREVLEDF 461 (468)
T ss_pred HHHHHHHHhhCCcccCCCHH-HHHHHHHHh
Confidence 99999999999999999998 455555544
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=367.29 Aligned_cols=246 Identities=28% Similarity=0.356 Sum_probs=207.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV 474 (757)
.+|.....||.|+|++||+|+.. ++.||||++.+.... ..+-+..|-++|.+| .||.|++||..|+|.. |+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 46777888999999999999886 459999999765432 223467899999999 8999999999998865 899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
+||++||+|.++|.+.+. |+......++.+|+.||+|||++| ||||||||+|||||.||++||+|||.|+.+++
T Consensus 153 Le~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999987764 788888889999999999999998 99999999999999999999999999999875
Q ss_pred CCCC-------ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh
Q 004388 555 DPSF-------VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL 627 (757)
Q Consensus 555 ~~~~-------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l 627 (757)
.... .........++||..|.+||++..+..++.+|+|+||||||+|+.|+|||...+.. .+.+-+
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-------liFqkI 299 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-------LIFQKI 299 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-------HHHHHH
Confidence 4322 11222235689999999999999999999999999999999999999999654332 222333
Q ss_pred hhhcCCCChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 628 DAQAGDWPIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 628 d~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
....-.||...++.+.+|+.+.|..||.+|++..
T Consensus 300 ~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~ 333 (604)
T KOG0592|consen 300 QALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQ 333 (604)
T ss_pred HHhcccCCCCCCHHHHHHHHHHHccCccccccHH
Confidence 3344567888889999999999999999999986
No 11
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-40 Score=358.40 Aligned_cols=247 Identities=25% Similarity=0.307 Sum_probs=197.8
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchh---hHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQ---NKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~---~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
..++|.....||+|+||.||+|+-+ |..+|+|++++..... ......|-.+|...++|+||+||..|++.. ||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4557888889999999999999875 4599999998765443 345678999999999999999999998765 89
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
||||++||++..+|.+.+ .|+......++.+++.|+..||+.| +|||||||+|+|||..|++||+|||||..+.
T Consensus 219 iMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999998765 4888888999999999999999998 9999999999999999999999999996443
Q ss_pred CCC---------------------CCcc--cc------------------ccccCCcccccCCCccccccCCCCCcchhh
Q 004388 554 SDP---------------------SFVS--TT------------------YKNTGPVGTLCYIDPEYQRTGLISPKSDVY 592 (757)
Q Consensus 554 ~~~---------------------~~~~--~~------------------~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvw 592 (757)
... .... +. ......+|||.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 200 0000 00 001124899999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh--hHHHHHHHHHHHHhhccCCCCCc
Q 004388 593 AYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI--KETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 593 SlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~--~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
|||||+||||.|.|||......+..-..-++...+ .+|. ..+.+..+||.+||. ||.+|-.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l-----~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL-----KFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc-----cCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 99999999999999997655443322212222111 2232 346889999999999 9999977
No 12
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-41 Score=337.36 Aligned_cols=233 Identities=26% Similarity=0.363 Sum_probs=201.5
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchh---hHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQ---NKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~---~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
.+|...+.||.|+||.|.+++.+ +..+|+|++....... .+...+|..+|+.+.||++++|++.|.+.. +|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46788889999999999999886 4599999998765443 345678999999999999999999998765 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||++||.|..+|.+.+. ++.....-++.||+.||+|||+.+ |++|||||+|||||.+|++||+|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 99999999999976553 888899999999999999999998 999999999999999999999999999987653
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
.-..||||.|+|||.+....|+.++|+|||||++|||+.|.+||...... .....++. ..-.+|
T Consensus 198 ---------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~------~iY~KI~~-~~v~fP 261 (355)
T KOG0616|consen 198 ---------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI------QIYEKILE-GKVKFP 261 (355)
T ss_pred ---------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH------HHHHHHHh-CcccCC
Confidence 23569999999999999999999999999999999999999999755432 22333333 334577
Q ss_pred hhHHHHHHHHHHHHhhccCCCC
Q 004388 636 IKETKELAALGLSCAELRRKDR 657 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~R 657 (757)
.-.+..+.+|+...++.|-..|
T Consensus 262 ~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 262 SYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cccCHHHHHHHHHHHhhhhHhh
Confidence 7888999999999999999998
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-41 Score=353.85 Aligned_cols=249 Identities=27% Similarity=0.426 Sum_probs=200.9
Q ss_pred cCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeeccc--ccCC--ceEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGA--CPDH--GCLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~--~~~~--~~LV~E 476 (757)
.++...+.||+|+||.||++...+ ...|||..........+.+.+|+.+|++++|||||+++|. ..+. .++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 346667789999999999999875 7999998776533335668999999999999999999996 3443 479999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-CCceEEeeecCccccCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-NLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-~~~~KL~DFGla~~~~~~ 555 (757)
|+++|||.+++.+.+. .++...+.++..||+.||.|||+++ ||||||||+||||+. +|.+||+|||+++.....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999987664 5999999999999999999999988 999999999999999 799999999999876631
Q ss_pred CCCccccccccCCcccccCCCccccccCC-CCCcchhhhHHHHHHHHHhCCCCcccc-chhhhhhchhhHHHHhhhhcCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGL-ISPKSDVYAYGMVILQLLTAKPAIAIT-HKVETAIDEDNLAEILDAQAGD 633 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~ksDvwSlGvil~elltG~~Pf~~~-~~~~~~~~~~~l~~~ld~~~~~ 633 (757)
. ..........||+.|||||++..+. ..+++|||||||+++||+||++||... ..... .+........+.
T Consensus 172 ~---~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~-----~~~ig~~~~~P~ 243 (313)
T KOG0198|consen 172 G---TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEA-----LLLIGREDSLPE 243 (313)
T ss_pred c---ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHH-----HHHHhccCCCCC
Confidence 1 1111234568999999999998643 345999999999999999999999642 11111 111111223456
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+|...+.+..+++.+|+..+|..|||+.+.+
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL 274 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELL 274 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 7778899999999999999999999998633
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.9e-41 Score=338.19 Aligned_cols=248 Identities=26% Similarity=0.368 Sum_probs=195.8
Q ss_pred CCccceeeccCCcEEEEEEEECC--eEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
.|+...++|+|+||.||+++++. ..||||++.... ....+-.++|+.+|++|+|||+|.|+.+|.... +||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 45666789999999999999864 599999987543 234455789999999999999999999997654 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|+..=| +.|.+..+ .++...+..+++|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.+.....
T Consensus 83 ~dhTvL-~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 83 CDHTVL-HELERYPN--GVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred cchHHH-HHHHhccC--CCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 987544 44655444 4888899999999999999999998 99999999999999999999999999999884332
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch----h----hHHHHhh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE----D----NLAEILD 628 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~----~----~l~~~ld 628 (757)
. .|..+.|.+|.|||.+.+ ..|+..+||||+||++.||+||.+-|.....++..+.. | ...+++.
T Consensus 157 ~------YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 157 N------YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred h------hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 1 255689999999998877 68999999999999999999999999876666554321 1 1111111
Q ss_pred hh-------cCC----CC-----hhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 629 AQ-------AGD----WP-----IKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 629 ~~-------~~~----~p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
.. .+. .| +..+.-+.+|+..|+++||.+|++-.+.
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql 281 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQL 281 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHH
Confidence 10 000 01 1335578999999999999999997753
No 15
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.8e-40 Score=356.35 Aligned_cols=258 Identities=26% Similarity=0.421 Sum_probs=201.5
Q ss_pred hcCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCc-hhhHHHHHHHHHHHhc-CCCceeeecccccCC--
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGN-IQNKQFLQELEVLSKI-RHPHLLLLLGACPDH-- 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~-- 470 (757)
.++|...++||.|+||.||+|.+. +..||||++..... .....+.+|+.+|.++ +||||++++|+|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 456888899999999999999752 24799999875432 2345689999999999 899999999988643
Q ss_pred -ceEEEEecCCCCHHHHHhhcCC---------------------------------------------------------
Q 004388 471 -GCLVYEYMENGSLEDRLYRKNN--------------------------------------------------------- 492 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~~--------------------------------------------------------- 492 (757)
.++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 3789999999999999875321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcc
Q 004388 493 --TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVG 570 (757)
Q Consensus 493 --~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~g 570 (757)
..++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....... ......+
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~----~~~~~~~ 238 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----RKGSARL 238 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchh----cccCCCC
Confidence 135788899999999999999999987 9999999999999999999999999998654332111 1123356
Q ss_pred cccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHH
Q 004388 571 TLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSC 649 (757)
Q Consensus 571 t~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~C 649 (757)
++.|+|||++.+..++.++|||||||+||||+| |..||......+. ....+.+......|...+..+.+|+.+|
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~c 313 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-----FCQRLKDGTRMRAPENATPEIYRIMLAC 313 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-----HHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 788999999988889999999999999999997 9999964322111 1111112212223445677899999999
Q ss_pred hhccCCCCCccchhhhhHHHHHH
Q 004388 650 AELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 650 l~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
|..+|.+||++. +++..|+.+.
T Consensus 314 l~~dp~~RPs~~-el~~~l~~~~ 335 (338)
T cd05102 314 WQGDPKERPTFS-ALVEILGDLL 335 (338)
T ss_pred ccCChhhCcCHH-HHHHHHHHHH
Confidence 999999999998 5777776653
No 16
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=345.75 Aligned_cols=255 Identities=19% Similarity=0.288 Sum_probs=203.8
Q ss_pred cCCCHHHHHHhhcCCccceeeccCCcEEEEEEEECCeEEEEEEEccCCchh---hHHHHHHHHHHHhcCCCceeeecccc
Q 004388 391 RNLTWEEIESATLSFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQ---NKQFLQELEVLSKIRHPHLLLLLGAC 467 (757)
Q Consensus 391 ~~~~~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~---~~~f~~Ev~il~~l~Hpniv~l~g~~ 467 (757)
+.++.++| +......||+|++|.||+|.+++..||||++....... .+.|.+|+.+|.+++||||++++|++
T Consensus 13 ~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 13 KCIESDDI-----DKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred eecCHHHc-----CCCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 44455555 33334679999999999999999999999987543322 46688999999999999999999998
Q ss_pred cC------CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCEEEcCCCCCCeeecCCCc
Q 004388 468 PD------HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNT-KPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 468 ~~------~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~ivHrDLKp~NILld~~~~ 540 (757)
.+ ..++||||+++|+|.+++.... .+++.....++.+++.||.|||.. + ++||||||+|||++.++.
T Consensus 88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 88 IDIVDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYK 161 (283)
T ss_pred EecccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCc
Confidence 65 2379999999999999986543 488999999999999999999985 5 789999999999999999
Q ss_pred eEEeeecCccccCCCCCCccccccccCCcccccCCCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh
Q 004388 541 SKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT--GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI 618 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~ 618 (757)
+||+|||+++.+.... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||......
T Consensus 162 ~kl~dfg~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~---- 228 (283)
T PHA02988 162 LKIICHGLEKILSSPP---------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK---- 228 (283)
T ss_pred EEEcccchHhhhcccc---------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH----
Confidence 9999999998654321 23468999999999876 67999999999999999999999999643211
Q ss_pred chhhHHHHhhh-hcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 619 DEDNLAEILDA-QAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 619 ~~~~l~~~ld~-~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
..+..++.. .....|...+..+.+|+.+||+.+|.+||++. +++..|+.+.
T Consensus 229 --~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~-ell~~l~~~~ 280 (283)
T PHA02988 229 --EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIK-EILYNLSLYK 280 (283)
T ss_pred --HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHH-HHHHHHHHHH
Confidence 111111111 11233445788999999999999999999998 5777776654
No 17
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.3e-40 Score=354.48 Aligned_cols=241 Identities=25% Similarity=0.395 Sum_probs=205.3
Q ss_pred CCccceeeccCCcEEEEEEEECCe--EEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||+|+||.||||+.+++ .||+|.+.+... .....+.+|++|++.|+|||||.++.+|.... ++|.||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 456666799999999999988765 899999876543 34556899999999999999999999997644 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+.| +|..+|...+. +++..+..|+.++..||.|||+.. |+|||+||.||||+.+|++|+||||+|+......
T Consensus 83 a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t- 154 (808)
T KOG0597|consen 83 AVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT- 154 (808)
T ss_pred hhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc-
Confidence 986 99999976554 899999999999999999999988 9999999999999999999999999999876532
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
...+...|||.|||||+..++.|+..+|+||||||+|||++|+|||..... -.+.+.+-.....||..
T Consensus 155 -----~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si-------~~Lv~~I~~d~v~~p~~ 222 (808)
T KOG0597|consen 155 -----SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI-------TQLVKSILKDPVKPPST 222 (808)
T ss_pred -----eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH-------HHHHHHHhcCCCCCccc
Confidence 233567899999999999999999999999999999999999999953321 12333333344678999
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.+..+..++.-.+..||..|-++.+.+
T Consensus 223 ~S~~f~nfl~gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 223 ASSSFVNFLQGLLIKDPAQRLTWTDLL 249 (808)
T ss_pred ccHHHHHHHHHHhhcChhhcccHHHHh
Confidence 999999999999999999999988543
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=353.05 Aligned_cols=240 Identities=27% Similarity=0.413 Sum_probs=202.6
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeeccccc--CCceEEEEecC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACP--DHGCLVYEYME 479 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~--~~~~LV~Ey~~ 479 (757)
.|....+||+|+.|.||.+... +..||||.+........+-+.+|+.+|+..+|||||.++..|. +....|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 3555568999999999999875 4589999998877667777899999999999999999999874 45589999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
||+|.|.+.... +++.++..|+.+++.||.|||..+ |+|||||.+||||+.+|.+||+|||+|..+.....
T Consensus 354 ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 354 GGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred CCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence 999999885443 888999999999999999999988 99999999999999999999999999988776543
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc--CCCChh
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA--GDWPIK 637 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~--~~~p~~ 637 (757)
+....+|||+|||||+.....|++++||||||++++||+-|.|||........ +.-+-+... ...|..
T Consensus 425 ----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA------lyLIa~ng~P~lk~~~k 494 (550)
T KOG0578|consen 425 ----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA------LYLIATNGTPKLKNPEK 494 (550)
T ss_pred ----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH------HHHHhhcCCCCcCCccc
Confidence 44667999999999999999999999999999999999999999964322221 111222211 124556
Q ss_pred HHHHHHHHHHHHhhccCCCCCccch
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..|.+++.+||+.|+.+||++.+
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~e 519 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKE 519 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHH
Confidence 7899999999999999999999985
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-39 Score=346.70 Aligned_cols=247 Identities=25% Similarity=0.346 Sum_probs=195.5
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCC----ceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~LV~ 475 (757)
.|....+||+|.||.||++++. +..||+|.+..+.. ....-..+||.||++|+||||++|.+...+. .|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 3555567999999999999986 45799999887642 2333457899999999999999999988654 38999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
|||++ +|.-++...+ -.|+..++..++.||+.||.|||..+ |+|||||.+|||||.+|.+||+|||||+++...
T Consensus 198 eYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred ecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99986 7877775433 34889999999999999999999998 999999999999999999999999999988765
Q ss_pred CCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-cCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-AGD 633 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~ 633 (757)
... ..|..+-|.+|.|||++.+. .|+.++|+||.||||.||++|++.|.....+++.-. +.+++-.. ...
T Consensus 272 ~~~-----~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~k---IfklcGSP~e~~ 343 (560)
T KOG0600|consen 272 GSA-----PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHK---IFKLCGSPTEDY 343 (560)
T ss_pred CCc-----ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHH---HHHHhCCCChhc
Confidence 432 24667899999999987664 699999999999999999999999987665554211 11111100 011
Q ss_pred CC------------------------hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 634 WP------------------------IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 634 ~p------------------------~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
|+ ...+....+|+..+|.+||.+|.++.+.+
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred cccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 22 02345678899999999999999987533
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=349.48 Aligned_cols=243 Identities=24% Similarity=0.322 Sum_probs=199.7
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC----Cc-hhhHHHHHHHHHHHhcC-CCceeeecccccC--C
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK----GN-IQNKQFLQELEVLSKIR-HPHLLLLLGACPD--H 470 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~----~~-~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~--~ 470 (757)
....|...+.||+|+||.||.|... +..||+|++... .. ...+.+.+|+.++++++ ||||++++.++.. .
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4557888999999999999999874 569999977654 12 23455678999999999 9999999999854 4
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecCc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGLS 549 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGla 549 (757)
.++||||+.||+|.+++...+ .+.+.....++.|+++|+.|||+.+ |+||||||+|||||.+ +.+||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 589999999999999998743 4777899999999999999999998 9999999999999999 99999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccCC-CC-CcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL-IS-PKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL 627 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l 627 (757)
........ .....+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||....... +...+
T Consensus 169 ~~~~~~~~------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-------l~~ki 235 (370)
T KOG0583|consen 169 AISPGEDG------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-------LYRKI 235 (370)
T ss_pred cccCCCCC------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-------HHHHH
Confidence 98741111 224569999999999998866 75 88999999999999999999997532211 12223
Q ss_pred hhhcCCCChhH-HHHHHHHHHHHhhccCCCCCccch
Q 004388 628 DAQAGDWPIKE-TKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 628 d~~~~~~p~~~-~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....-..|... +.++..|+.+|+..+|..|+++.+
T Consensus 236 ~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~ 271 (370)
T KOG0583|consen 236 RKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLE 271 (370)
T ss_pred hcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 33333445555 899999999999999999999985
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=346.69 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=201.2
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhH-HHHHHHHHHHhcC-CCceeeecccccCCc---eEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNK-QFLQELEVLSKIR-HPHLLLLLGACPDHG---CLV 474 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~-~f~~Ev~il~~l~-Hpniv~l~g~~~~~~---~LV 474 (757)
.++|...++||.|+||.||+|+.. +..||||.++.......+ --++|+..|++|+ |||||+|..++.|.. ++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 346777889999999999999875 558999998766443222 2368999999999 999999999997655 889
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
||||+ .+|..++..+ ...++...+..|+.||+.||+|+|.+| +.||||||+|||+..+..+||+|||||+.+..
T Consensus 89 fE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred HHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc
Confidence 99996 6999988665 457999999999999999999999998 99999999999999999999999999998876
Q ss_pred CCCCccccccccCCcccccCCCcccc-ccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch-------------
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQ-RTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE------------- 620 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~------------- 620 (757)
.+.+ |..+.|.+|.|||++ +.+.|+.+.|||++|||++|+.+-+|.|...+.++..+..
T Consensus 163 kpPY-------TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 163 KPPY-------TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred CCCc-------chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 5432 566899999999965 6788999999999999999999999999876655543221
Q ss_pred --hhHHHHhhhhcCCC--------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 --DNLAEILDAQAGDW--------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 --~~l~~~ld~~~~~~--------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+...+.-..+.. -...+.++.+|+.+||..||.+||++.+
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~ 287 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQ 287 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHH
Confidence 12222222111110 1136788999999999999999999985
No 22
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-38 Score=337.89 Aligned_cols=244 Identities=23% Similarity=0.339 Sum_probs=195.7
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|...+.||+|+||.||+|... +..||+|.+..... .....+.+|+.+|.+++||||+.+++++.+.. ++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677789999999999999874 66999998865422 22345789999999999999999999886544 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 999999998876543 235899999999999999999999988 9999999999999999999999999998754322
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
. .....||+.|+|||++.+..++.++|||||||++|+|+||+.||........ ...+...+.......+.
T Consensus 157 ~-------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~ 226 (285)
T cd05631 157 T-------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK---REEVDRRVKEDQEEYSE 226 (285)
T ss_pred e-------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh---HHHHHHHhhcccccCCc
Confidence 1 1234799999999999999999999999999999999999999974322110 01111112122233455
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccc
Q 004388 637 KETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
..+..+.+|+.+||..+|.+||+..
T Consensus 227 ~~s~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05631 227 KFSEDAKSICRMLLTKNPKERLGCR 251 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHhcCCC
Confidence 6678999999999999999999854
No 23
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-38 Score=340.59 Aligned_cols=234 Identities=24% Similarity=0.309 Sum_probs=195.3
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|.....||+|+||.||+|... +..||+|++.... ......+.+|+.+|++++||||+++++++.+.. ++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 6788889999999999999986 6799999986432 223456889999999999999999999987654 79999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++...+ .+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 82 YVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 999999999986543 4888999999999999999999988 9999999999999999999999999998654321
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||...... .+...+......+|.
T Consensus 156 ---------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-------~~~~~i~~~~~~~~~ 219 (291)
T cd05612 156 ---------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-------GIYEKILAGKLEFPR 219 (291)
T ss_pred ---------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCcCCCc
Confidence 2347999999999998888999999999999999999999999643221 111222222334566
Q ss_pred hHHHHHHHHHHHHhhccCCCCCc
Q 004388 637 KETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
..+..+.+|+.+||+.||.+||+
T Consensus 220 ~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 220 HLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred cCCHHHHHHHHHHcCCCHHHccC
Confidence 66788999999999999999997
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=352.71 Aligned_cols=252 Identities=33% Similarity=0.485 Sum_probs=197.3
Q ss_pred CCccceeeccCCcEEEEEEEECCeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCCc-eEEEEecCC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG-CLVYEYMEN 480 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-~LV~Ey~~~ 480 (757)
.+....+||+|.||+||+|.|.| .||||+++.... ...+.|.+||.++++-+|-||+.|.|+|.... .||..+|+|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeG 471 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEG 471 (678)
T ss_pred Hhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccC
Confidence 34456689999999999999987 499999987643 35677999999999999999999999996654 789999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
-+|+.+|+-... .|.....+.|+.|||.|+.|||..+ |||||||..||||.+++.+||+||||+..-..- .
T Consensus 472 sSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w----~ 542 (678)
T KOG0193|consen 472 SSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW----S 542 (678)
T ss_pred chhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeee----c
Confidence 999999986543 4778889999999999999999988 999999999999999999999999999653311 1
Q ss_pred ccccccCCcccccCCCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh-hchhhHHHHhhhhcCCCCh
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRT---GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA-IDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~---~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~l~~~ld~~~~~~p~ 636 (757)
.........|...|||||+++. .+|++.+|||||||++|||+||..||.+. ..+.. +..+.- .+.+.......
T Consensus 543 g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dqIifmVGrG--~l~pd~s~~~s 619 (678)
T KOG0193|consen 543 GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQIIFMVGRG--YLMPDLSKIRS 619 (678)
T ss_pred cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-ChhheEEEeccc--ccCccchhhhc
Confidence 1112234578999999998764 46899999999999999999999999732 22211 111111 00111111223
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+++.++.+|+..||..++++||.+.+ |+..|+
T Consensus 620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~-il~~l~ 651 (678)
T KOG0193|consen 620 NCPKAMKRLLSDCWKFDREERPLFPQ-LLSKLE 651 (678)
T ss_pred cCHHHHHHHHHHHHhcCcccCccHHH-HHHHHH
Confidence 56789999999999999999999985 444333
No 25
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=352.77 Aligned_cols=241 Identities=23% Similarity=0.301 Sum_probs=200.7
Q ss_pred HhhcCCccceeeccCCcEEEEEEEECCe--EEEEEEEccCCch---hhHHHHHHHHHHHhcC-CCceeeecccccC--Cc
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGNI---QNKQFLQELEVLSKIR-HPHLLLLLGACPD--HG 471 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~--~~ 471 (757)
....+|....+||+|.||.|+++.++++ .+|||+++++... ..+..+.|..|+.... ||.++.|++.|+. +.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3456799999999999999999998754 9999999987544 3455678999888775 9999999999965 45
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
|+||||+.||++..+. ....++.....-++.+|+.||.|||.++ |||||||.+|||||.+|++||+|||+++.
T Consensus 445 ~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence 8999999999944322 2234888888899999999999999998 99999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA 631 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~ 631 (757)
.-...+ ...+.+|||.|||||++....|+..+|+|||||+|||||+|.+||...+. +.+.+.|-..-
T Consensus 518 ~m~~g~------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE-------ee~FdsI~~d~ 584 (694)
T KOG0694|consen 518 GMGQGD------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE-------EEVFDSIVNDE 584 (694)
T ss_pred cCCCCC------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHhcCC
Confidence 543222 23567999999999999999999999999999999999999999965432 22233332333
Q ss_pred CCCChhHHHHHHHHHHHHhhccCCCCCcc
Q 004388 632 GDWPIKETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 632 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
..+|...+.+...|+.+++..+|.+|-..
T Consensus 585 ~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 45788889999999999999999999877
No 26
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.6e-38 Score=337.91 Aligned_cols=255 Identities=27% Similarity=0.445 Sum_probs=195.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC------------------CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeee
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH------------------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLL 463 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~------------------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l 463 (757)
..|....+||+|+||.||+|.+. +..||+|++.... ......|.+|+.+|.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 35777889999999999999753 2369999987653 2345679999999999999999999
Q ss_pred cccccCC--ceEEEEecCCCCHHHHHhhcC----------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEE
Q 004388 464 LGACPDH--GCLVYEYMENGSLEDRLYRKN----------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIH 525 (757)
Q Consensus 464 ~g~~~~~--~~LV~Ey~~~gsL~~~L~~~~----------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH 525 (757)
+++|.+. .++||||+++|+|.+++.... ....++|..+..|+.||+.||.|||+.+ |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 9998654 489999999999999886432 1234788899999999999999999988 999
Q ss_pred cCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh--
Q 004388 526 RDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-- 603 (757)
Q Consensus 526 rDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-- 603 (757)
|||||+|||++.++.+||+|||+++.+...... .......++..|+|||++..+.++.++|||||||++|+|++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYY----RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCcee----EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999999999999999999865433211 11123456889999999988899999999999999999987
Q ss_pred CCCCccccchhhhhhchhhHHHHhhhh----cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 604 AKPAIAITHKVETAIDEDNLAEILDAQ----AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 604 G~~Pf~~~~~~~~~~~~~~l~~~ld~~----~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
|..||........ + ......+... ....|...+..+.+|+.+||..+|.+||++.+ |...|
T Consensus 238 ~~~p~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~-i~~~l 302 (304)
T cd05096 238 KEQPYGELTDEQV-I--ENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSD-IHAFL 302 (304)
T ss_pred CCCCCCcCCHHHH-H--HHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHH-HHHHH
Confidence 5567753322111 0 0111111111 11223456678999999999999999999984 55554
No 27
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=344.19 Aligned_cols=236 Identities=21% Similarity=0.305 Sum_probs=195.3
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
.+|.....||.|+||.||+|.+. +..||||++.... ......+.+|+.+|.+++||||+++++++.+.. ++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888899999999999999985 5689999987532 223456889999999999999999999986554 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++...+ .+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999987543 4788889999999999999999988 999999999999999999999999999866432
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
. ....||+.|+|||++.+..++.++|||||||++|+|+||+.||....... .+..+.. .....|
T Consensus 172 ~---------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~-~~~~~p 235 (329)
T PTZ00263 172 T---------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR------IYEKILA-GRLKFP 235 (329)
T ss_pred c---------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH------HHHHHhc-CCcCCC
Confidence 1 23479999999999998889999999999999999999999996432211 1112222 222345
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCcc
Q 004388 636 IKETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
...+..+.+|+.+||+.||.+||+.
T Consensus 236 ~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 236 NWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 4567789999999999999999984
No 28
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.1e-38 Score=342.79 Aligned_cols=231 Identities=26% Similarity=0.318 Sum_probs=189.8
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gs 482 (757)
.||+|+||.||++... +..||||++.... ......+.+|+.+|.+++||||+++++++.+.. |+||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 5999999999999874 5689999987542 223356788999999999999999999886554 89999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccc
Q 004388 483 LEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTT 562 (757)
Q Consensus 483 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~ 562 (757)
|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~----- 150 (323)
T cd05571 82 LFFHLSRER---VFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred HHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC-----
Confidence 999886543 4889999999999999999999988 99999999999999999999999999875332211
Q ss_pred ccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHH
Q 004388 563 YKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKEL 642 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l 642 (757)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ..+...+.......|...+..+
T Consensus 151 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~~~~~~~~~p~~~~~~~ 222 (323)
T cd05571 151 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEIRFPRTLSPEA 222 (323)
T ss_pred -cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCCCCCCCCCHHH
Confidence 12345799999999999988999999999999999999999999964321 1112222222334566678899
Q ss_pred HHHHHHHhhccCCCCCc
Q 004388 643 AALGLSCAELRRKDRPD 659 (757)
Q Consensus 643 ~~Li~~Cl~~~p~~RPs 659 (757)
.+|+.+||+.||.+||+
T Consensus 223 ~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 223 KSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHccCCHHHcCC
Confidence 99999999999999995
No 29
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.9e-39 Score=313.88 Aligned_cols=242 Identities=26% Similarity=0.331 Sum_probs=204.8
Q ss_pred hcCCccceeeccCCcEEEEEEEECCe--EEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
.++|+..+.||+|.||.||.|+.+.+ .||+|++.... .....++.+|++|-+.|+||||+++||+|.+.. ||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 45788999999999999999998754 89999987543 223467899999999999999999999998765 999
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
+||.++|+|...|..... ..++......++.|+|.||.|+|..+ ||||||||+|+|++.++.+||+|||.+-..+.
T Consensus 101 lEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 999999999999975433 34777788889999999999999988 99999999999999999999999999875442
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
.+....+||..|.+||...+..++..+|+|++|++.||+|.|.+||.... ....+. -+.......
T Consensus 177 --------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~------~~etYk-rI~k~~~~~ 241 (281)
T KOG0580|consen 177 --------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS------HSETYK-RIRKVDLKF 241 (281)
T ss_pred --------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh------hHHHHH-HHHHccccC
Confidence 23466799999999999999999999999999999999999999996332 222222 333333456
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
|...+...+++|.+|+..+|.+|..+.+
T Consensus 242 p~~is~~a~dlI~~ll~~~p~~r~~l~~ 269 (281)
T KOG0580|consen 242 PSTISGGAADLISRLLVKNPIERLALTE 269 (281)
T ss_pred CcccChhHHHHHHHHhccCccccccHHH
Confidence 7778899999999999999999998875
No 30
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-38 Score=361.77 Aligned_cols=253 Identities=28% Similarity=0.499 Sum_probs=208.5
Q ss_pred ccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 406 SENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
.....||+|.||.||+|... .+.||||.++..... ...+|++|+++|..|+|||||+|+|+|.+.. |+|+
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF 568 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF 568 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence 34457999999999999764 348999999987666 7889999999999999999999999997665 9999
Q ss_pred EecCCCCHHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEe
Q 004388 476 EYMENGSLEDRLYRKNN-----------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIG 544 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~-----------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~ 544 (757)
|||..|+|..+|..... .++|+..+.+.||.|||.|+.||-++. +|||||-..|+||+++..+||+
T Consensus 569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEec
Confidence 99999999999974321 234888899999999999999999998 9999999999999999999999
Q ss_pred eecCccccCCCCCCcccccccc-CCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhh
Q 004388 545 DVGLSTMLNSDPSFVSTTYKNT-GPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDN 622 (757)
Q Consensus 545 DFGla~~~~~~~~~~~~~~~~~-~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 622 (757)
||||++.+-..+ -|+.. ...-...||+||.+..++|+.+||||||||+|||++| |+.||..... .+-
T Consensus 646 DfGLsRdiYssD-----YYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn------~EV 714 (774)
T KOG1026|consen 646 DFGLSRDIYSSD-----YYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN------QEV 714 (774)
T ss_pred ccccchhhhhhh-----hhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch------HHH
Confidence 999998655332 22222 2344678999999999999999999999999999996 8888863321 122
Q ss_pred HHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHH
Q 004388 623 LAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKE 673 (757)
Q Consensus 623 l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~ 673 (757)
+.-+-.......|..++.++.+|+..||+..|++||+++ +|-..|+....
T Consensus 715 Ie~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~-eI~~~L~~~~~ 764 (774)
T KOG1026|consen 715 IECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFK-EIHSRLQAWAQ 764 (774)
T ss_pred HHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHH-HHHHHHHHHHh
Confidence 233333444567888999999999999999999999999 47677766544
No 31
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.2e-38 Score=338.19 Aligned_cols=232 Identities=24% Similarity=0.293 Sum_probs=189.8
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSL 483 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL 483 (757)
||+|+||.||+|... +..||+|++.... ......+.+|+.+|.+++||||++++++|.+.. ++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999985 4589999986432 233456788999999999999999999886544 899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------ 148 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD------ 148 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCCC------
Confidence 99987543 4889999999999999999999988 99999999999999999999999999976432211
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELA 643 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~ 643 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||++||......+ .+..++ .....+|...+..+.
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~ 221 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE------MYRKIL-QEPLRFPDGFDRDAK 221 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH------HHHHHH-cCCCCCCCcCCHHHH
Confidence 1234579999999999998899999999999999999999999996432211 111122 122344556778899
Q ss_pred HHHHHHhhccCCCCCccc
Q 004388 644 ALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 644 ~Li~~Cl~~~p~~RPs~~ 661 (757)
+++.+||..+|.+||++.
T Consensus 222 ~li~~~L~~dp~~R~~~~ 239 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYN 239 (312)
T ss_pred HHHHHHcCCCHHHcCCCC
Confidence 999999999999999764
No 32
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=329.13 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=201.2
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYE 476 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~E 476 (757)
...|.....||.|..++||+|+.. +..||||++..+... ..+.+.+|+..|+.++||||+.++..|... .++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 446888889999999999999874 679999999866433 357789999999999999999999988544 378999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
||.+||+.+++...-. ..+.+..+..|+.+++.||.|||++| .||||||+.||||+.+|.+||+|||.+..+....
T Consensus 105 fMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999999876443 24899999999999999999999998 9999999999999999999999999987666544
Q ss_pred CCccccccccCCcccccCCCcccc--ccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQ--RTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~--~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
.. ..++....+||++|||||++ +...|+.|+|||||||+.+||.+|..||......+.. +....+..
T Consensus 181 ~R--~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL---------l~tLqn~p 249 (516)
T KOG0582|consen 181 DR--QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL---------LLTLQNDP 249 (516)
T ss_pred ce--eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH---------HHHhcCCC
Confidence 22 22222677999999999984 3456999999999999999999999999754433321 11111111
Q ss_pred C------------hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 635 P------------IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 635 p------------~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
| ......+.+++..||..||.+||++.+.+
T Consensus 250 p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLl 291 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLL 291 (516)
T ss_pred CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 1 23466899999999999999999998533
No 33
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-37 Score=345.29 Aligned_cols=255 Identities=25% Similarity=0.402 Sum_probs=199.1
Q ss_pred hcCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc-
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG- 471 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~- 471 (757)
.++|....+||+|+||.||+|++. +..||||++.... ....+.+.+|+.+|..+ +||||++++|+|.+..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 346888899999999999999742 3489999987543 23445688999999999 8999999999996654
Q ss_pred -eEEEEecCCCCHHHHHhhcCC----------------------------------------------------------
Q 004388 472 -CLVYEYMENGSLEDRLYRKNN---------------------------------------------------------- 492 (757)
Q Consensus 472 -~LV~Ey~~~gsL~~~L~~~~~---------------------------------------------------------- 492 (757)
++||||+++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 899999999999998864321
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 493 --------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 493 --------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
...+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 124788999999999999999999987 999999999999999999999999999876543221
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~ 636 (757)
. ......++..|+|||++.+..++.++|||||||++|||+| |.+||...... ..+...+... ....|.
T Consensus 271 ~----~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~ 340 (375)
T cd05104 271 V----VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD------SKFYKMIKEGYRMLSPE 340 (375)
T ss_pred c----ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch------HHHHHHHHhCccCCCCC
Confidence 1 1122345678999999998999999999999999999998 88998643211 1112222221 122233
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
..+.++.+|+.+||..+|.+||++.+ |+..|++
T Consensus 341 ~~~~~l~~li~~cl~~dP~~RPs~~e-il~~l~~ 373 (375)
T cd05104 341 CAPSEMYDIMKSCWDADPLKRPTFKQ-IVQLIEQ 373 (375)
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHH-HHHHHHh
Confidence 45678999999999999999999984 6666654
No 34
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-38 Score=345.92 Aligned_cols=237 Identities=26% Similarity=0.373 Sum_probs=202.2
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
-|...+.||.|+.|.|-+|++. |+.+|||++.... ......+.+||-||+-|.|||+++||++|.++. |||.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 4667788999999999999985 5699999987652 223456789999999999999999999997654 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|++||.|.++|.+++ +++..+..++++||+.|+.|||..+ |+||||||+|+|||..+.+||+|||+|.+..++.
T Consensus 93 yv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred ecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 999999999998876 4889999999999999999999999 9999999999999999999999999998765543
Q ss_pred CCccccccccCCcccccCCCccccccCCC-CCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh---hcC
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLI-SPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA---QAG 632 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~---~~~ 632 (757)
- -.+.||+|.|.+||++.+.+| +.++||||.|||||.||||+.||+. +++..++.. ..-
T Consensus 167 l-------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD----------dNir~LLlKV~~G~f 229 (786)
T KOG0588|consen 167 L-------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD----------DNIRVLLLKVQRGVF 229 (786)
T ss_pred c-------ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC----------ccHHHHHHHHHcCcc
Confidence 1 134599999999999998877 4799999999999999999999962 233333332 233
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
+.|...+.++.+|+.+|+..||..|.++.++
T Consensus 230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI 260 (786)
T KOG0588|consen 230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEI 260 (786)
T ss_pred cCCCcCCHHHHHHHHHHhccCccccccHHHH
Confidence 5677889999999999999999999999853
No 35
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.7e-37 Score=327.00 Aligned_cols=251 Identities=21% Similarity=0.325 Sum_probs=198.6
Q ss_pred cCCccceeeccCCcEEEEEEEEC-----CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-----HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-----~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV 474 (757)
.+|.....||+|+||.||+|.+. +..||+|.++.... .....|.+|+.++.+++||||++++|++... .++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45778889999999999999764 35899999876532 3345689999999999999999999998654 4899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 85 TEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999987543 35899999999999999999999987 99999999999999999999999998765432
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGD 633 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~ 633 (757)
... +......++..|+|||++.++.++.++|||||||++|||++ |.+||....... .+..+.+.....
T Consensus 160 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~ 228 (266)
T cd05064 160 EAI-----YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD------VIKAVEDGFRLP 228 (266)
T ss_pred cch-----hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH------HHHHHHCCCCCC
Confidence 111 11123345778999999998999999999999999999775 999996432211 111111111223
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
.|...+..+.+++.+||+.+|.+||++. ++...|.+
T Consensus 229 ~~~~~~~~~~~li~~c~~~~p~~RP~~~-~i~~~l~~ 264 (266)
T cd05064 229 APRNCPNLLHQLMLDCWQKERGERPRFS-QIHSILSK 264 (266)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCCCHH-HHHHHHHh
Confidence 3455678899999999999999999997 56666654
No 36
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-38 Score=332.15 Aligned_cols=249 Identities=25% Similarity=0.349 Sum_probs=193.5
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--------------hhhHHHHHHHHHHHhcCCCceeeec
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--------------IQNKQFLQELEVLSKIRHPHLLLLL 464 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--------------~~~~~f~~Ev~il~~l~Hpniv~l~ 464 (757)
..++|.....||.|.||.|-+|+.. ++.||||++..... ...+...+||.||++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3457888889999999999999874 67999999864321 1125688999999999999999999
Q ss_pred ccccC----CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 465 GACPD----HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 465 g~~~~----~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
.+..+ ..|||+|||..|.+.. .....+.++..+...++.++..||.|||.++ ||||||||+|+||+.+|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w---~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKW---CPPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCcccc---CCCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCc
Confidence 99754 4499999999887743 2333344899999999999999999999998 999999999999999999
Q ss_pred eEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCC----CCCcchhhhHHHHHHHHHhCCCCccccchhhh
Q 004388 541 SKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL----ISPKSDVYAYGMVILQLLTAKPAIAITHKVET 616 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~ 616 (757)
+||+|||.+...+......... .-...+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||......+
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~-~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~- 326 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDD-QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE- 326 (576)
T ss_pred EEeeccceeeecccCCccccHH-HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-
Confidence 9999999998774332111111 112369999999999876633 4578899999999999999999996443222
Q ss_pred hhchhhHHHHhhhhcCCCCh--hHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 617 AIDEDNLAEILDAQAGDWPI--KETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 617 ~~~~~~l~~~ld~~~~~~p~--~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
.+.+++... ...|. +....+.+||.++|+.||..|-++.++
T Consensus 327 -----l~~KIvn~p-L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~i 369 (576)
T KOG0585|consen 327 -----LFDKIVNDP-LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDI 369 (576)
T ss_pred -----HHHHHhcCc-ccCCCcccccHHHHHHHHHHhhcChhheeehhhh
Confidence 122222221 12232 467899999999999999999988753
No 37
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-39 Score=344.06 Aligned_cols=234 Identities=26% Similarity=0.438 Sum_probs=193.0
Q ss_pred eeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCHHHH
Q 004388 409 LRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSLEDR 486 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL~~~ 486 (757)
..||.|+.|.||+|++++..||||+.+.-. ..+|.-|++|+||||+.|.|+|.... |||||||..|.|..+
T Consensus 130 eWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 469999999999999999999999765321 24778899999999999999998766 799999999999999
Q ss_pred HhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccccccc
Q 004388 487 LYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNT 566 (757)
Q Consensus 487 L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~ 566 (757)
|.... ++.-.....|..+||.|+.|||.++ |||||||.-||||..+..+||+|||-++.+.+.. ...
T Consensus 203 Lka~~---~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S-------TkM 269 (904)
T KOG4721|consen 203 LKAGR---PITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS-------TKM 269 (904)
T ss_pred HhccC---ccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhh-------hhh
Confidence 96543 3666677889999999999999999 9999999999999999999999999998776431 234
Q ss_pred CCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHH
Q 004388 567 GPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALG 646 (757)
Q Consensus 567 ~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li 646 (757)
.++||..|||||++.+.+.+.|+|||||||+|||||||..||...+...-.+.-+ ...| -...|..++..|.-|+
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG--sNsL---~LpvPstcP~GfklL~ 344 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG--SNSL---HLPVPSTCPDGFKLLL 344 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc--CCcc---cccCcccCchHHHHHH
Confidence 5799999999999999999999999999999999999999996433221111111 0011 1234667889999999
Q ss_pred HHHhhccCCCCCccchhhhhHH
Q 004388 647 LSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 647 ~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.+||.-.|+.||++.+ ++..|
T Consensus 345 Kqcw~sKpRNRPSFrq-il~Hl 365 (904)
T KOG4721|consen 345 KQCWNSKPRNRPSFRQ-ILLHL 365 (904)
T ss_pred HHHHhcCCCCCccHHH-HHHHH
Confidence 9999999999999994 55444
No 38
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.3e-37 Score=333.38 Aligned_cols=253 Identities=24% Similarity=0.386 Sum_probs=200.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC--Ce----EEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HT----FAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~----~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV 474 (757)
.+|+....||+|+||.||+|.+. +. .||+|++.... ......|.+|+.+++.++||||++++|+|... .++|
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 35888899999999999999863 22 48999987543 33456789999999999999999999998654 4899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
+||+++|+|.+++.... ..+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 87 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999987543 34888999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AG 632 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~ 632 (757)
.... .......++..|+|||++....++.++|||||||++|||+| |+.||...... .+..++... ..
T Consensus 162 ~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~ 230 (316)
T cd05108 162 DEKE----YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 230 (316)
T ss_pred CCcc----eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHhCCCCC
Confidence 3221 11123345778999999998999999999999999999998 99999643211 112222211 12
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
..+...+..+.+++.+||..+|.+||++.+ ++..+..+.
T Consensus 231 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~-l~~~l~~~~ 269 (316)
T cd05108 231 PQPPICTIDVYMIMVKCWMIDADSRPKFRE-LIIEFSKMA 269 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHH-HHHHHHHHH
Confidence 234456678999999999999999999984 555555554
No 39
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-37 Score=338.50 Aligned_cols=231 Identities=26% Similarity=0.309 Sum_probs=188.7
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gs 482 (757)
.||+|+||.||++... +..||+|++.... ......+.+|+.++..++||||++++++|.+.. ||||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 5999999999999874 5689999987542 223456778999999999999999999886544 89999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccc
Q 004388 483 LEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTT 562 (757)
Q Consensus 483 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~ 562 (757)
|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----- 150 (323)
T cd05595 82 LFFHLSRER---VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred HHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-----
Confidence 998886543 4889999999999999999999988 99999999999999999999999999875322111
Q ss_pred ccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHH
Q 004388 563 YKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKEL 642 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l 642 (757)
......||+.|+|||++.++.++.++|||||||++|+|+||+.||...... .+...+.......|...+..+
T Consensus 151 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-------~~~~~~~~~~~~~p~~~~~~~ 222 (323)
T cd05595 151 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------RLFELILMEEIRFPRTLSPEA 222 (323)
T ss_pred -ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCCCCCCCCCHHH
Confidence 123457999999999999889999999999999999999999999643211 111222222234556678899
Q ss_pred HHHHHHHhhccCCCCCc
Q 004388 643 AALGLSCAELRRKDRPD 659 (757)
Q Consensus 643 ~~Li~~Cl~~~p~~RPs 659 (757)
.+++.+||..+|.+||+
T Consensus 223 ~~li~~~L~~dP~~R~~ 239 (323)
T cd05595 223 KSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHccCCHHHhCC
Confidence 99999999999999984
No 40
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-37 Score=344.49 Aligned_cols=256 Identities=25% Similarity=0.409 Sum_probs=200.5
Q ss_pred hcCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc-
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG- 471 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~- 471 (757)
.++|...+.||+|+||.||+|...+ ..||||++.... ......+.+|+.+++.+ +|||||+++++|.+..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 3468888999999999999987532 379999987543 23345688999999999 8999999999987654
Q ss_pred -eEEEEecCCCCHHHHHhhcCC----------------------------------------------------------
Q 004388 472 -CLVYEYMENGSLEDRLYRKNN---------------------------------------------------------- 492 (757)
Q Consensus 472 -~LV~Ey~~~gsL~~~L~~~~~---------------------------------------------------------- 492 (757)
++||||+++|+|.+++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 899999999999998864321
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 493 ---------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 493 ---------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
..++++..+.+|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.......
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~---- 269 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV---- 269 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCccee----
Confidence 124788889999999999999999987 9999999999999999999999999998654332110
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKETKE 641 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~~~~ 641 (757)
......+++.|+|||++..+.++.++|||||||++|+|++ |+.||...... ..+...+... ....|...+..
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 343 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN------SKFYKMVKRGYQMSRPDFAPPE 343 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc------HHHHHHHHcccCccCCCCCCHH
Confidence 1122345678999999988899999999999999999997 99999643211 1122222221 12233345688
Q ss_pred HHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 642 LAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
+.+++.+||+.+|.+||++. .|++.|+++
T Consensus 344 l~~li~~cl~~dp~~RPs~~-~l~~~l~~~ 372 (374)
T cd05106 344 IYSIMKMCWNLEPTERPTFS-QISQLIQRQ 372 (374)
T ss_pred HHHHHHHHcCCChhhCcCHH-HHHHHHHHH
Confidence 99999999999999999998 577777654
No 41
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.5e-37 Score=309.59 Aligned_cols=244 Identities=25% Similarity=0.372 Sum_probs=195.0
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch--hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI--QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~--~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
.|....+||+|.||.||+|++. ++.||||.++..... ......+||..|+.++||||+.|+++|+... .||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 4556678999999999999986 559999998765322 2345689999999999999999999997655 689999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|+ .+|+..+..+. ..++-..+..++.+++.||+|||.+. |+||||||.|+|++.+|.+||+|||+|+.+.....
T Consensus 83 m~-tdLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 83 MP-TDLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred cc-ccHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 97 69999886543 46888899999999999999999998 99999999999999999999999999999875543
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh-hhcCCCC
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD-AQAGDWP 635 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~~p 635 (757)
.. +..+-|.+|.|||.+.+ ..|+..+||||.|||+.||+-|.|-|.....+++... +...+- +....||
T Consensus 157 ~~------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~---If~~LGTP~~~~WP 227 (318)
T KOG0659|consen 157 IQ------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSK---IFRALGTPTPDQWP 227 (318)
T ss_pred cc------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHH---HHHHcCCCCcccCc
Confidence 21 23378999999997755 5699999999999999999999988876655544211 111110 1111232
Q ss_pred h-----------------------hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 I-----------------------KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~-----------------------~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. ..+..+.+|+..++.+||.+|.+..+
T Consensus 228 ~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~q 277 (318)
T KOG0659|consen 228 EMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQ 277 (318)
T ss_pred cccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHH
Confidence 1 34667899999999999999999885
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.5e-37 Score=335.70 Aligned_cols=248 Identities=27% Similarity=0.349 Sum_probs=195.8
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
.++|....+||+|+||.||++.+. +..+|+|++.... ......|.+|+++|.+++||||+++++++.+.. ++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 357888899999999999999986 4589999987643 234567899999999999999999999986543 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++..+....
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 999999999886543 4888999999999999999999853 39999999999999999999999999997654321
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhh--hhch--------------
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVET--AIDE-------------- 620 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~-------------- 620 (757)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||......+. .+..
T Consensus 159 --------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
T cd06649 159 --------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSIS 230 (331)
T ss_pred --------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccC
Confidence 1334799999999999988899999999999999999999999963321110 0000
Q ss_pred --------------------hhHHHHhhhh----cCCCC-hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 --------------------DNLAEILDAQ----AGDWP-IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 --------------------~~l~~~ld~~----~~~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+.++++.. ....+ ...+.++.+|+.+||..+|++||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~e 297 (331)
T cd06649 231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKM 297 (331)
T ss_pred cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHH
Confidence 0011111111 11111 135678999999999999999999985
No 43
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.8e-38 Score=342.28 Aligned_cols=235 Identities=23% Similarity=0.307 Sum_probs=194.1
Q ss_pred cCCccceeeccCCcEEEEEEEECC---eEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH---TFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~---~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
++|.....||+|+||.||+|.+.+ ..||+|++.... ......+.+|+.++..++||||+++++++.+.. ++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468888999999999999998643 479999886432 223456889999999999999999999997654 899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999987543 4889999999999999999999988 99999999999999999999999999986543
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
. .....||+.|+|||++.+..++.++|||||||++|+|+||++||....... ....+. .....+
T Consensus 184 ~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~------~~~~i~-~~~~~~ 247 (340)
T PTZ00426 184 R---------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL------IYQKIL-EGIIYF 247 (340)
T ss_pred C---------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH------HHHHHh-cCCCCC
Confidence 2 123579999999999988889999999999999999999999997443211 111122 222334
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCc
Q 004388 635 PIKETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
|...+..+.+++.+|++.+|.+|++
T Consensus 248 p~~~~~~~~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 248 PKFLDNNCKHLMKKLLSHDLTKRYG 272 (340)
T ss_pred CCCCCHHHHHHHHHHcccCHHHcCC
Confidence 5566778999999999999999974
No 44
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-37 Score=353.14 Aligned_cols=248 Identities=20% Similarity=0.283 Sum_probs=201.0
Q ss_pred CCccceeeccCCcEEEEEEEEC---CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH---HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~---~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
.|.....||+|+||.||++... +..||+|.+..........+.+|+.+|+.++|||||+++++|.+.. ||||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3788889999999999999764 4578888776555555566788999999999999999999986544 8999999
Q ss_pred CCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 479 ENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 479 ~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+||+|.++|... ....++++.....++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988642 23446889999999999999999999987 99999999999999999999999999987654321
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
. ......+||+.|+|||++.+..++.++|||||||++|+|+||+.||...... ..+..++.......|..
T Consensus 225 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~------~~~~~~~~~~~~~~~~~ 294 (478)
T PTZ00267 225 L----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR------EIMQQVLYGKYDPFPCP 294 (478)
T ss_pred c----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCCcc
Confidence 1 1123457999999999999899999999999999999999999999643221 11222222222334455
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.+..+.+++.+||..+|.+||++.+++
T Consensus 295 ~s~~~~~li~~~L~~dP~~Rps~~~~l 321 (478)
T PTZ00267 295 VSSGMKALLDPLLSKNPALRPTTQQLL 321 (478)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 678899999999999999999998654
No 45
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1e-37 Score=340.03 Aligned_cols=242 Identities=24% Similarity=0.276 Sum_probs=194.9
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|....+||.|+||.||+|.+. +..||||++.... ......+.+|+.++..++||||+++++++.+.. |||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 6888899999999999999985 5699999987542 223456889999999999999999999986654 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|++||+|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 82 YVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999986543 4888899999999999999999988 99999999999999999999999999976543
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC-
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP- 635 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p- 635 (757)
......||+.|+|||++.+..++.++|||||||++|||+||++||......+...........+.. ..+.
T Consensus 154 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~ 224 (333)
T cd05600 154 -------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR--PVYDD 224 (333)
T ss_pred -------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC--CCCCc
Confidence 123457999999999999889999999999999999999999999644322111000000000100 1111
Q ss_pred --hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 --IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 --~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+.+|+.+||..+|.+||++.+
T Consensus 225 ~~~~~s~~~~~li~~~l~~~~~rr~s~~~ 253 (333)
T cd05600 225 PRFNLSDEAWDLITKLINDPSRRFGSLED 253 (333)
T ss_pred cccccCHHHHHHHHHHhhChhhhcCCHHH
Confidence 134778999999999999999999875
No 46
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.8e-37 Score=337.68 Aligned_cols=231 Identities=25% Similarity=0.300 Sum_probs=188.9
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gs 482 (757)
.||+|+||.||++... +..||+|++.... ......+.+|+.+|+.++||||+++++++.+.. ++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 5899999999999875 5699999987542 223456788999999999999999999886544 89999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccc
Q 004388 483 LEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTT 562 (757)
Q Consensus 483 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~ 562 (757)
|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~----- 150 (328)
T cd05593 82 LFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA----- 150 (328)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCccc-----
Confidence 998886543 4889999999999999999999988 99999999999999999999999999875432211
Q ss_pred ccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHH
Q 004388 563 YKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKEL 642 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l 642 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||...... .+...+.......|...+..+
T Consensus 151 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-------~~~~~~~~~~~~~p~~~~~~~ 222 (328)
T cd05593 151 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------KLFELILMEDIKFPRTLSADA 222 (328)
T ss_pred -ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-------HHHHHhccCCccCCCCCCHHH
Confidence 123457999999999999889999999999999999999999999643221 111222222234555677889
Q ss_pred HHHHHHHhhccCCCCCc
Q 004388 643 AALGLSCAELRRKDRPD 659 (757)
Q Consensus 643 ~~Li~~Cl~~~p~~RPs 659 (757)
.+++.+||..+|.+||+
T Consensus 223 ~~li~~~L~~dP~~R~~ 239 (328)
T cd05593 223 KSLLSGLLIKDPNKRLG 239 (328)
T ss_pred HHHHHHHcCCCHHHcCC
Confidence 99999999999999984
No 47
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3e-37 Score=327.26 Aligned_cols=251 Identities=25% Similarity=0.468 Sum_probs=200.2
Q ss_pred CCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCL 473 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~L 473 (757)
+|.....||+|+||.||+|...+ ..||+|.+..... .....|.+|+.++.+++||||+++++++.+. .++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 56777889999999999998743 3689998875432 3446689999999999999999999998654 389
Q ss_pred EEEecCCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 474 VYEYMENGSLEDRLYRKNN-------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
+|||+++|+|.+++..... ...+++.....++.|++.||.|||..+ |+||||||+|||++.++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCc
Confidence 9999999999999875422 135888999999999999999999988 999999999999999999
Q ss_pred eEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhc
Q 004388 541 SKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAID 619 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 619 (757)
+||+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||+| |..||.....
T Consensus 163 ~~L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~------ 232 (283)
T cd05048 163 VKISDFGLSRDIYSADYY----RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN------ 232 (283)
T ss_pred EEECCCcceeeccccccc----cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 999999999865432211 11233467889999999988889999999999999999998 9999864321
Q ss_pred hhhHHHHh-hhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 620 EDNLAEIL-DAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 620 ~~~l~~~l-d~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
..+...+ .......|...+..+.+|+.+||..+|.+||++.+ |+..|+
T Consensus 233 -~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~-i~~~l~ 281 (283)
T cd05048 233 -QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKD-IHTRLR 281 (283)
T ss_pred -HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHH-HHHHHh
Confidence 1122222 22223345567889999999999999999999984 655554
No 48
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.5e-37 Score=327.37 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=193.1
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCCH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGSL 483 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gsL 483 (757)
||+|+||.||++.+. +..||+|++..... .....+..|+.+++.++||||+++++++... .++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999875 56899999865422 2235678899999999999999999988654 4899999999999
Q ss_pred HHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccc
Q 004388 484 EDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTT 562 (757)
Q Consensus 484 ~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~ 562 (757)
.+.+.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----- 152 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS----- 152 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-----
Confidence 98875432 3346899999999999999999999988 99999999999999999999999999976653321
Q ss_pred ccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHH
Q 004388 563 YKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKEL 642 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l 642 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||........ .......++. .....+...+..+
T Consensus 153 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~ 228 (280)
T cd05608 153 -KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRILN-DSVTYPDKFSPAS 228 (280)
T ss_pred -cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHHHhhcc-cCCCCcccCCHHH
Confidence 12345799999999999999999999999999999999999999964321110 0011111111 1123445577889
Q ss_pred HHHHHHHhhccCCCCCccchhhhhHH
Q 004388 643 AALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 643 ~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.+++.+||+.+|.+||++.+.....+
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~ 254 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGL 254 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHH
Confidence 99999999999999998765333333
No 49
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-37 Score=327.28 Aligned_cols=245 Identities=33% Similarity=0.566 Sum_probs=191.7
Q ss_pred ceeeccCCcEEEEEEEEC------CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 408 NLRIGMGGYGTVYKGTFH------HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~------~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
...||.|.||.||+|.+. +..|+||++..... ...+.|.+|++++++++||||++++|+|.+. .++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999998 56999999966433 3467899999999999999999999999743 38999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|.++|.... ...+++..+..|+.||+.||.|||+.+ |+||||+|.|||++.++.+||+|||++.........
T Consensus 84 ~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 84 PGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999998762 345899999999999999999999988 999999999999999999999999999876322211
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
.......+...|+|||++....++.++||||||+++|||+| |+.||..... ......+.+......+..
T Consensus 160 ----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~ 229 (259)
T PF07714_consen 160 ----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN------EEIIEKLKQGQRLPIPDN 229 (259)
T ss_dssp ----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH------HHHHHHHHTTEETTSBTT
T ss_pred ----cccccccccccccccccccccccccccccccccccccccccccccccccccc------ccccccccccccceeccc
Confidence 12234467889999999998989999999999999999999 7788753311 112223333333444555
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
.+..+.+++.+||..+|.+||++.+ ++..
T Consensus 230 ~~~~~~~li~~C~~~~p~~RPs~~~-i~~~ 258 (259)
T PF07714_consen 230 CPKDIYSLIQQCWSHDPEKRPSFQE-ILQE 258 (259)
T ss_dssp SBHHHHHHHHHHT-SSGGGS--HHH-HHHH
T ss_pred hhHHHHHHHHHHcCCChhhCcCHHH-HHhc
Confidence 6788999999999999999999984 5443
No 50
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.7e-37 Score=334.42 Aligned_cols=240 Identities=23% Similarity=0.258 Sum_probs=193.3
Q ss_pred CCccceeeccCCcEEEEEEEECC--eEEEEEEEccCC---chhhHHHHHHHHHHHhcCCC-ceeeecccccCC--ceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHP-HLLLLLGACPDH--GCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hp-niv~l~g~~~~~--~~LV~ 475 (757)
+|...+.||+|+||.||+|...+ ..||||++.... ......+..|+.++..+.|+ +|+.+++++.+. .|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47778899999999999999864 489999987542 23345678899999999765 577888877544 48999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999886543 4788999999999999999999987 999999999999999999999999998753221
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
.. ......||+.|+|||++.+..++.++|||||||++|+|+||+.||...... .+...+.......|
T Consensus 155 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-------~~~~~i~~~~~~~~ 221 (324)
T cd05587 155 GK------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-------ELFQSIMEHNVSYP 221 (324)
T ss_pred CC------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCCCCCC
Confidence 11 123457999999999999889999999999999999999999999643321 11122222234456
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+.+++.+||..+|.+||+...
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~ 248 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGCGP 248 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCC
Confidence 667888999999999999999998754
No 51
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.2e-37 Score=334.85 Aligned_cols=234 Identities=26% Similarity=0.329 Sum_probs=189.4
Q ss_pred eeeccCCcEEEEEEEE-----CCeEEEEEEEccCC----chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 409 LRIGMGGYGTVYKGTF-----HHTFAAVKVLQSKG----NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~-----~~~~vAvK~l~~~~----~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
++||+|+||.||++.. .+..||||++.... ......+.+|+.+|+.++||||++++++|.+.. ++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 4799999999999875 35689999987532 223345788999999999999999999986554 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++|+|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999886543 4778888899999999999999988 99999999999999999999999999875432211
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||++||....... .+..++.. ....|..
T Consensus 156 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~~~~~-~~~~~~~ 222 (323)
T cd05584 156 ------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDKILKG-KLNLPPY 222 (323)
T ss_pred ------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHHHHcC-CCCCCCC
Confidence 1234579999999999988889999999999999999999999996443221 12222222 2334556
Q ss_pred HHHHHHHHHHHHhhccCCCCCccc
Q 004388 638 ETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.+..+.+++.+||+.+|.+||+..
T Consensus 223 ~~~~~~~li~~~l~~~p~~R~~~~ 246 (323)
T cd05584 223 LTPEARDLLKKLLKRNPSSRLGAG 246 (323)
T ss_pred CCHHHHHHHHHHcccCHhHcCCCC
Confidence 678899999999999999999543
No 52
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.7e-37 Score=334.28 Aligned_cols=239 Identities=23% Similarity=0.270 Sum_probs=193.8
Q ss_pred CCccceeeccCCcEEEEEEEECC--eEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~ 475 (757)
+|.....||+|+||.||+|...+ ..||||++.... ......+..|..++..+ +||+|+.+++++.+.. ++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47778899999999999998864 489999987542 22334567788888877 5899999999886544 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999886543 4888999999999999999999988 999999999999999999999999999754322
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
.. ......||+.|+|||++.+..++.++|||||||++|+|+||+.||...... .+...+......+|
T Consensus 155 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-------~~~~~i~~~~~~~p 221 (323)
T cd05616 155 GV------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-------ELFQSIMEHNVAYP 221 (323)
T ss_pred CC------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCCC
Confidence 11 123457999999999999999999999999999999999999999643321 11222222234456
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
...+..+.+|+.+|++.+|.+|++..
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGCG 247 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCCC
Confidence 67788999999999999999999964
No 53
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.1e-37 Score=334.01 Aligned_cols=236 Identities=23% Similarity=0.301 Sum_probs=189.1
Q ss_pred eeccCCcEEEEEEEECC--eEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFHH--TFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|.+.+ ..||||++.... ......+..|..++..+ +||||+++++++.... ++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 69999999999999864 589999987542 22334456677777654 8999999999986544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~---- 151 (316)
T cd05592 82 DLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG---- 151 (316)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC----
Confidence 9999886543 4888899999999999999999987 99999999999999999999999999976432221
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .+...+.......|...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~ 222 (316)
T cd05592 152 --KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-------ELFDSILNDRPHFPRWISKE 222 (316)
T ss_pred --ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCCCCCCCCCCHH
Confidence 123457999999999999888999999999999999999999999643321 11122222233445556788
Q ss_pred HHHHHHHHhhccCCCCCccchhh
Q 004388 642 LAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+.+++.+||..+|.+||++.+.+
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHH
Confidence 99999999999999999986444
No 54
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5e-37 Score=325.01 Aligned_cols=254 Identities=23% Similarity=0.389 Sum_probs=198.8
Q ss_pred hhcCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC--
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-- 470 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-- 470 (757)
++++|+....||+|+||.||+|.+.+ ..||||++.... ......|.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45678999999999999999998643 479999886432 23445688999999999999999999998654
Q ss_pred ceEEEEecCCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEE
Q 004388 471 GCLVYEYMENGSLEDRLYRKNN-------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKI 543 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL 543 (757)
.++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 4899999999999999865322 234678889999999999999999987 999999999999999999999
Q ss_pred eeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhh
Q 004388 544 GDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDN 622 (757)
Q Consensus 544 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 622 (757)
+|||+++......... ......+++.|+|||++.++.++.++|||||||++|||+| |..||...... ..
T Consensus 161 ~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~------~~ 230 (277)
T cd05062 161 GDFGMTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE------QV 230 (277)
T ss_pred CCCCCccccCCcceee----cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HH
Confidence 9999997654322111 1122356788999999988889999999999999999999 78888533211 11
Q ss_pred HHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 623 LAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 623 l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
+..+........+...+..+.+++.+||+.+|.+||++.+ ++..|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e-~l~~l 275 (277)
T cd05062 231 LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLE-IISSI 275 (277)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH-HHHHh
Confidence 1112222222334456778999999999999999999984 44444
No 55
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.3e-37 Score=342.50 Aligned_cols=256 Identities=22% Similarity=0.404 Sum_probs=201.2
Q ss_pred hcCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCceeeecccccCCc-
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKGN-IQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG- 471 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~- 471 (757)
...|...++||.|+||.||+|.+.+ ..||||++..... ...+.|.+|+.+|.++. ||||++++|+|.+..
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 4567888899999999999998642 2699999875432 23467899999999996 999999999997654
Q ss_pred -eEEEEecCCCCHHHHHhhcCC----------------------------------------------------------
Q 004388 472 -CLVYEYMENGSLEDRLYRKNN---------------------------------------------------------- 492 (757)
Q Consensus 472 -~LV~Ey~~~gsL~~~L~~~~~---------------------------------------------------------- 492 (757)
||||||+++|+|.++|.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 899999999999998865321
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC
Q 004388 493 -----------------------------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH 537 (757)
Q Consensus 493 -----------------------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~ 537 (757)
...+++..+..++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence 124788889999999999999999987 999999999999999
Q ss_pred CCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhh
Q 004388 538 NLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVET 616 (757)
Q Consensus 538 ~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~ 616 (757)
++.+||+|||+++.+....... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~-- 346 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYV----SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD-- 346 (400)
T ss_pred CCEEEEEeCCcceecccccccc----ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--
Confidence 9999999999998764332211 1123457889999999988889999999999999999997 98998532111
Q ss_pred hhchhhHHHHh-hhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 617 AIDEDNLAEIL-DAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 617 ~~~~~~l~~~l-d~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..+...+ .......+...+..+.+++.+||..+|.+||++. .|.+.|+++
T Consensus 347 ----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-~l~~~l~~l 397 (400)
T cd05105 347 ----STFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFL-HLSDIVESL 397 (400)
T ss_pred ----HHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHH-HHHHHHHHH
Confidence 1111111 1112233445678899999999999999999998 477777654
No 56
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.7e-37 Score=325.40 Aligned_cols=257 Identities=25% Similarity=0.418 Sum_probs=203.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
.+|...+.||+|+||.||++... +..+|+|.+..........|.+|++++.+++||||++++++|.+.. ++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46778889999999999999752 2468999887665555677999999999999999999999986544 89
Q ss_pred EEEecCCCCHHHHHhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEE
Q 004388 474 VYEYMENGSLEDRLYRKN----------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKI 543 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL 543 (757)
||||+++++|.+++...+ ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999986543 1234899999999999999999999987 999999999999999999999
Q ss_pred eeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhh
Q 004388 544 GDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDN 622 (757)
Q Consensus 544 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 622 (757)
+|||+++........ .......+++.|+|||++.+..++.++|||||||++|+|+| |.+||....... .
T Consensus 162 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~------~ 231 (288)
T cd05093 162 GDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------V 231 (288)
T ss_pred ccCCccccccCCcee----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------H
Confidence 999999865432211 11223456788999999988889999999999999999998 999986432211 1
Q ss_pred HHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHH
Q 004388 623 LAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKE 673 (757)
Q Consensus 623 l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~ 673 (757)
+..+........+...+..+.+|+.+||+.+|.+||++. ++...|+.+..
T Consensus 232 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~-~v~~~l~~~~~ 281 (288)
T cd05093 232 IECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIK-EIHSLLQNLAK 281 (288)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHHHHH
Confidence 111221112223344567899999999999999999998 56777776653
No 57
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.4e-37 Score=334.70 Aligned_cols=244 Identities=21% Similarity=0.282 Sum_probs=192.6
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHH---HhcCCCceeeecccccCCc--eEE
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVL---SKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il---~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
|.....||+|+||.||+|.+. +..||||++.... ....+.+.+|+.++ +.++||||+++++++.+.. |+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 556788999999999999885 5689999987542 22234566676655 5668999999999986544 899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|..++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 999999999887743 24899999999999999999999988 99999999999999999999999999875432
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
... ......||+.|+|||++.+..++.++|||||||++|+|+||+.||....... .+..+. ......
T Consensus 154 ~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~------~~~~i~-~~~~~~ 220 (324)
T cd05589 154 FGD------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE------VFDSIV-NDEVRY 220 (324)
T ss_pred CCC------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH------HHHHHH-hCCCCC
Confidence 211 1234579999999999998889999999999999999999999996432211 111121 222335
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
|...+..+.+++.+||..+|.+||+..+..+..+
T Consensus 221 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l 254 (324)
T cd05589 221 PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDV 254 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHH
Confidence 5567788999999999999999998765443333
No 58
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.5e-37 Score=333.39 Aligned_cols=251 Identities=23% Similarity=0.323 Sum_probs=190.4
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC-------Cce
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD-------HGC 472 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~-------~~~ 472 (757)
.|....+||+|+||.||+|... +..||||.+.... ......+.+|+.+|++++||||+++++++.. ..|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 3677889999999999999875 5689999986432 2234568899999999999999999998732 238
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
+||||+. ++|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68988886443 4899999999999999999999988 999999999999999999999999999865
Q ss_pred CCCCCCccccccccCCcccccCCCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh-------------
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRT--GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA------------- 617 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~------------- 617 (757)
...... ........||+.|+|||++.+ ..++.++|||||||++|+|+||++||.........
T Consensus 154 ~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 154 FNDTPT---AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred ccccCc---cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 432211 111234579999999998865 67899999999999999999999999643321110
Q ss_pred ----hchhhHHHHhhhhcCCCC-------hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 618 ----IDEDNLAEILDAQAGDWP-------IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 618 ----~~~~~l~~~ld~~~~~~p-------~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+........+.......+ ...+..+.+++.+||..+|.+||++.+++
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l 288 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL 288 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence 000111111111111011 12356788999999999999999998533
No 59
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-36 Score=318.75 Aligned_cols=243 Identities=24% Similarity=0.412 Sum_probs=194.8
Q ss_pred eeccCCcEEEEEEEEC----CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFH----HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~----~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~gs 482 (757)
.||+|+||.||+|.+. +..+|+|++..... ...+.|.+|+.+++.+.||||++++|++.+. .++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 5899999999999763 46899999865432 2456789999999999999999999998654 489999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccc
Q 004388 483 LEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTT 562 (757)
Q Consensus 483 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~ 562 (757)
|.+++.... .+++..+..++.|++.||.|||..+ |+||||||.|||++.++.+||+|||++..+........
T Consensus 82 L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~-- 153 (257)
T cd05116 82 LNKFLQKNK---HVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK-- 153 (257)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeee--
Confidence 999886543 4889999999999999999999988 99999999999999999999999999987654332111
Q ss_pred ccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhHHH
Q 004388 563 YKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKETK 640 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~~~ 640 (757)
......+++.|+|||++..+.++.++|||||||++|||+| |++||...... .+...+... ....|...+.
T Consensus 154 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~~~~~i~~~~~~~~~~~~~~ 225 (257)
T cd05116 154 -AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-------EVTQMIESGERMECPQRCPP 225 (257)
T ss_pred -ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHCCCCCCCCCCCCH
Confidence 1122345689999999988889999999999999999998 99999643211 122222222 2345556788
Q ss_pred HHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 641 ELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 641 ~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
.+.+++.+||+.+|.+||++. .|...|+
T Consensus 226 ~l~~li~~~~~~~p~~Rp~~~-~i~~~l~ 253 (257)
T cd05116 226 EMYDLMKLCWTYGVDERPGFA-VVELRLR 253 (257)
T ss_pred HHHHHHHHHhccCchhCcCHH-HHHHHHh
Confidence 999999999999999999998 4555554
No 60
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.6e-37 Score=334.62 Aligned_cols=244 Identities=25% Similarity=0.297 Sum_probs=192.3
Q ss_pred CCccceeeccCCcEEEEEEEE-----CCeEEEEEEEccCC----chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--
Q 004388 404 SFSENLRIGMGGYGTVYKGTF-----HHTFAAVKVLQSKG----NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG-- 471 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~-----~~~~vAvK~l~~~~----~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~-- 471 (757)
+|...++||+|+||.||++.. .+..||+|++.... ....+.+..|+.++..+ +||||+.+++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477888999999999999876 35689999986432 22345678899999999 4999999999886554
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 79999999999999886543 4888999999999999999999988 99999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ 630 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~ 630 (757)
+...... ......||+.|+|||++.+. .++.++|||||||++|+|+||+.||........ ...+...+...
T Consensus 155 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---~~~~~~~~~~~ 226 (332)
T cd05614 155 FLSEEKE-----RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT---QSEVSRRILKC 226 (332)
T ss_pred ccccCCC-----ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC---HHHHHHHHhcC
Confidence 5432211 11345799999999988764 478899999999999999999999964321111 01111111122
Q ss_pred cCCCChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 631 AGDWPIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 631 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
....|...+..+.+++.+||..+|.+||+..
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 227 DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 2334455678899999999999999999654
No 61
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.8e-37 Score=326.04 Aligned_cols=244 Identities=23% Similarity=0.326 Sum_probs=196.2
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~E 476 (757)
+|+..++||+|+||.||++... ++.||+|++..... .....+.+|+.+++.++||||+++++.+.+. .++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4777889999999999999875 56999999865422 2234578899999999999999999988654 489999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 999999998886543 245899999999999999999999987 9999999999999999999999999998754322
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
. .....||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+...+.......+.
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~ 226 (285)
T cd05605 157 T-------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERRVKEDQEEYSE 226 (285)
T ss_pred c-------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHHhhhcccccCc
Confidence 1 123478999999999988889999999999999999999999996432111 001122222222334455
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccc
Q 004388 637 KETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
..+..+.+|+.+||..||.+||+..
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCR 251 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCC
Confidence 6778899999999999999999644
No 62
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.1e-37 Score=326.44 Aligned_cols=249 Identities=22% Similarity=0.313 Sum_probs=192.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
++|.....||+|+||.||+|++. +..||+|++.... ......+.+|+.+++.++||||++++++|.+.. ++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999986 4589999987542 233466889999999999999999999986544 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|++++.|..+.. .. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~-~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEE-MP--NGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHh-cC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 999877765432 22 34888999999999999999999988 9999999999999999999999999998764322
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhH--------HHHh-
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNL--------AEIL- 627 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l--------~~~l- 627 (757)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|++||..............+ ....
T Consensus 155 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 155 NA-----NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred cc-----cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 11 113357899999999998888999999999999999999999999754322211100000 0000
Q ss_pred -hhh--cCCC-------------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 628 -DAQ--AGDW-------------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 628 -d~~--~~~~-------------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
++. ...+ ....+..+.+|+.+||+.+|++||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~ 280 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQ 280 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHH
Confidence 000 0001 1124567999999999999999999874
No 63
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-36 Score=319.91 Aligned_cols=253 Identities=26% Similarity=0.436 Sum_probs=201.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC-----CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-----HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-----~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
++|.....||+|+||.||+|.+. ...||||++.... ......|.+|+.++.+++||||+++++++.+.. ++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 46888899999999999999874 2379999887543 334567899999999999999999999886544 899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|.+++..... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+..
T Consensus 84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999865432 5899999999999999999999987 99999999999999999999999999988753
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGD 633 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~ 633 (757)
.... +......+++.|+|||++.+..++.++||||||+++|+|++ |..||...... .....+.......
T Consensus 159 ~~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~ 228 (266)
T cd05033 159 SEAT----YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ------DVIKAVEDGYRLP 228 (266)
T ss_pred cccc----eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH------HHHHHHHcCCCCC
Confidence 2211 11123355788999999988889999999999999999998 99998532211 1111122222223
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.+...+..+.+++.+|++.+|.+||++. +++..|+++
T Consensus 229 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~-ei~~~l~~~ 265 (266)
T cd05033 229 PPMDCPSALYQLMLDCWQKDRNERPTFS-QIVSTLDKM 265 (266)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHhh
Confidence 3455678899999999999999999998 566666543
No 64
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.3e-37 Score=336.13 Aligned_cols=231 Identities=25% Similarity=0.311 Sum_probs=187.9
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gs 482 (757)
.||+|+||.||++... +..||+|++.... ......+..|+.++..++||||+++++++.+.. ||||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 5899999999999874 5699999987542 223456788999999999999999999886544 89999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 483 LEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 483 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
|.+++.... .+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---- 151 (325)
T cd05594 82 LFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---- 151 (325)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc----
Confidence 998886543 48899999999999999999997 56 99999999999999999999999999875432211
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.++.++.++|||||||+||+|+||+.||..... ..+...+.......|...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-------~~~~~~i~~~~~~~p~~~~~~ 222 (325)
T cd05594 152 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEIRFPRTLSPE 222 (325)
T ss_pred --ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-------HHHHHHHhcCCCCCCCCCCHH
Confidence 11335799999999999988999999999999999999999999964321 112222222233445567788
Q ss_pred HHHHHHHHhhccCCCCCc
Q 004388 642 LAALGLSCAELRRKDRPD 659 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs 659 (757)
+.+|+.+||+.+|.+|++
T Consensus 223 ~~~li~~~L~~dP~~R~~ 240 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLG 240 (325)
T ss_pred HHHHHHHHhhcCHHHhCC
Confidence 999999999999999973
No 65
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.4e-37 Score=334.00 Aligned_cols=239 Identities=23% Similarity=0.282 Sum_probs=190.4
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|... +..||||++.... ......+..|+.++..+ +||||++++++|.+.. +|||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 6999999999999885 5589999987542 22345578899999998 7999999999986554 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~---- 151 (329)
T cd05588 82 DLMFHMQRQR---KLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD---- 151 (329)
T ss_pred CHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCCC----
Confidence 9998886543 4899999999999999999999988 99999999999999999999999999874322111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhh--hhchhhHHHHhhhhcCCCChhHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVET--AIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||........ ......+...+.......|...+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 229 (329)
T cd05588 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLS 229 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCC
Confidence 12345799999999999988999999999999999999999999964221110 00111222222222334455667
Q ss_pred HHHHHHHHHHhhccCCCCCcc
Q 004388 640 KELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
..+.+++.+||..+|.+||+.
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCC
Confidence 889999999999999999985
No 66
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.8e-37 Score=335.93 Aligned_cols=240 Identities=25% Similarity=0.297 Sum_probs=193.6
Q ss_pred eeeccCCcEEEEEEEE-----CCeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecC
Q 004388 409 LRIGMGGYGTVYKGTF-----HHTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYME 479 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~-----~~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~ 479 (757)
+.||+|+||.||++.. .+..||+|++..... .....+.+|+++|++++||||+++++++.+.. |+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4699999999999865 357899999875422 23345778999999999999999999986554 89999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.+++.+.. .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 82 GGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--
Confidence 999999886543 4899999999999999999999988 99999999999999999999999999976543211
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||....... .+..+. ......|...+
T Consensus 154 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~------~~~~i~-~~~~~~p~~~~ 222 (318)
T cd05582 154 ----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE------TMTMIL-KAKLGMPQFLS 222 (318)
T ss_pred ----ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH------HHHHHH-cCCCCCCCCCC
Confidence 1134579999999999988889999999999999999999999996433211 111122 12223455567
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
..+.+|+.+||+.+|.+||++.++.+..
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a~~~~~~~ 250 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGAGPDGVEE 250 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCCCCHHH
Confidence 8899999999999999999987644333
No 67
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-36 Score=317.86 Aligned_cols=247 Identities=23% Similarity=0.386 Sum_probs=196.4
Q ss_pred cCCccceeeccCCcEEEEEEEECC-eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYME 479 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~ 479 (757)
+.|...+.||+|+||.||++.+.. ..+|+|.+.... .....|.+|+.+|++++||||++++++|.+.. ++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 347777889999999999998865 489999876432 33567899999999999999999999986544 89999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.+++.... ..+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05114 83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT- 156 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-
Confidence 999999886543 24889999999999999999999988 999999999999999999999999999865432211
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhH
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKE 638 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~ 638 (757)
......++..|+|||++.+..++.++||||||+++|+|+| |++||......+ .+..+........|...
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~~~ 226 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE------VVEMISRGFRLYRPKLA 226 (256)
T ss_pred ----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHHCCCCCCCCCCC
Confidence 1123346678999999988889999999999999999999 899996433211 11112211122234445
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
+..+.+++.+||..+|.+||++.+ ++..
T Consensus 227 ~~~~~~li~~c~~~~p~~Rps~~~-l~~~ 254 (256)
T cd05114 227 SMTVYEVMYSCWHEKPEGRPTFAE-LLRA 254 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHH-HHHh
Confidence 678999999999999999999985 4443
No 68
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.8e-37 Score=323.00 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=199.3
Q ss_pred cCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCCc--e
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--C 472 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~ 472 (757)
.+|.....||+|+||.||+|... +..||||.+...... ....|.+|+++|..++||||+++++++.+.. +
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 35667788999999999999763 257999998765443 4568999999999999999999999986544 8
Q ss_pred EEEEecCCCCHHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCce
Q 004388 473 LVYEYMENGSLEDRLYRKNN-----------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVS 541 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~-----------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~ 541 (757)
+||||+++|+|.+++...+. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 99999999999999975431 245788999999999999999999988 9999999999999999999
Q ss_pred EEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhch
Q 004388 542 KIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDE 620 (757)
Q Consensus 542 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 620 (757)
||+|||++..+...... .......+++.|+|||++.++.++.++|||||||++|+|++ |..||.......
T Consensus 162 kl~d~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~----- 232 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE----- 232 (280)
T ss_pred EECCcccceecccCcce----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----
Confidence 99999999765332211 01123356789999999999999999999999999999999 999985332211
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
....+........+...+..+.+++.+||..+|.+||++.+ |+..|
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e-il~~l 278 (280)
T cd05049 233 -VIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKD-IHERL 278 (280)
T ss_pred -HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH-HHHHh
Confidence 11111111222334456788999999999999999999984 55544
No 69
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.1e-37 Score=330.82 Aligned_cols=236 Identities=24% Similarity=0.305 Sum_probs=189.0
Q ss_pred eeccCCcEEEEEEEECC--eEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFHH--TFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|.+.+ ..||||++.... ......+..|..++..+ +||||+++++++.+.. ++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 69999999999999864 589999987542 22344567788888764 8999999999986554 7999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---- 151 (316)
T cd05619 82 DLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA---- 151 (316)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC----
Confidence 9999886532 4888999999999999999999988 99999999999999999999999999875322111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||...... .+...+.......|...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~ 222 (316)
T cd05619 152 --KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-------ELFQSIRMDNPCYPRWLTRE 222 (316)
T ss_pred --ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCCCccCCHH
Confidence 113457999999999999888999999999999999999999999643221 11122222223344456778
Q ss_pred HHHHHHHHhhccCCCCCccchhh
Q 004388 642 LAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+.+++.+||+.+|.+||++.+.+
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHH
Confidence 99999999999999999997434
No 70
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.2e-37 Score=337.85 Aligned_cols=247 Identities=27% Similarity=0.328 Sum_probs=197.3
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|.....||.|+||.||+|... +..||||++.... ......+.+|+.++..++||||+++++++.+.. ++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999986 6799999987542 233456889999999999999999999986554 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++... ..+++..+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999998765 35888999999999999999999987 999999999999999999999999999876543
Q ss_pred CCC-----------------------ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccc
Q 004388 556 PSF-----------------------VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITH 612 (757)
Q Consensus 556 ~~~-----------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~ 612 (757)
... ...........||+.|+|||++.+..++.++|||||||+||+|+||+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 200 000112234579999999999999999999999999999999999999997543
Q ss_pred hhhhhhchhhHHHHhhh-hcCCCCh--hHHHHHHHHHHHHhhccCCCCCc-cch
Q 004388 613 KVETAIDEDNLAEILDA-QAGDWPI--KETKELAALGLSCAELRRKDRPD-LKN 662 (757)
Q Consensus 613 ~~~~~~~~~~l~~~ld~-~~~~~p~--~~~~~l~~Li~~Cl~~~p~~RPs-~~~ 662 (757)
.... ...+... .....|. ..+..+.+|+.+|+. +|.+||+ +.+
T Consensus 235 ~~~~------~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ 281 (350)
T cd05573 235 LQET------YNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEE 281 (350)
T ss_pred HHHH------HHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHH
Confidence 2211 1122210 0011122 247889999999997 9999999 664
No 71
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=333.83 Aligned_cols=243 Identities=25% Similarity=0.378 Sum_probs=200.4
Q ss_pred cCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
..|+....||+|.||.||+|.+.. ..||+|++..+.. ...+++++|+.+|.++++|||..+||.+..+. .++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 346666789999999999999875 4899999987643 34678899999999999999999999986554 689999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|.||++.+.|.... .+.+....-|+.+++.||.|||..+ .+|||||+.||||..+|.+||+|||.+-.+....
T Consensus 93 ~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~- 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV- 165 (467)
T ss_pred hcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh-
Confidence 99999999885433 3467777889999999999999988 9999999999999999999999999998776543
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-cCCCCh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPI 636 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~ 636 (757)
.+...++|||.|||||++....|+.++||||||++.+||++|.||+...|.....+ ++... .+....
T Consensus 166 -----~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf-------lIpk~~PP~L~~ 233 (467)
T KOG0201|consen 166 -----KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF-------LIPKSAPPRLDG 233 (467)
T ss_pred -----hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE-------eccCCCCCcccc
Confidence 23467799999999999998899999999999999999999999997665533211 11111 112222
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..++.|++++..||..+|+.||++.+.+
T Consensus 234 ~~S~~~kEFV~~CL~k~P~~RpsA~~LL 261 (467)
T KOG0201|consen 234 DFSPPFKEFVEACLDKNPEFRPSAKELL 261 (467)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 5678899999999999999999998533
No 72
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.7e-37 Score=331.42 Aligned_cols=237 Identities=23% Similarity=0.295 Sum_probs=190.2
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|.+. +..||+|++.... ......+..|..++..+ +||||+++++++.+.. ++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 6999999999999985 4589999987542 22344567788888764 8999999999986654 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---- 151 (316)
T cd05620 82 DLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN---- 151 (316)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCCC----
Confidence 9999886543 4788899999999999999999988 99999999999999999999999999874322111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||...... .+.+.+.......|...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 222 (316)
T cd05620 152 --RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-------ELFESIRVDTPHYPRWITKE 222 (316)
T ss_pred --ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCCCCCCCHH
Confidence 123457999999999999889999999999999999999999999643221 12222222233345556788
Q ss_pred HHHHHHHHhhccCCCCCccchhhh
Q 004388 642 LAALGLSCAELRRKDRPDLKNQVL 665 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~vl 665 (757)
+.+++.+||+.+|.+||++.+.++
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHH
Confidence 999999999999999999865443
No 73
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.7e-36 Score=322.99 Aligned_cols=241 Identities=26% Similarity=0.415 Sum_probs=188.9
Q ss_pred CCccceeeccCCcEEEEEEEEC---CeEEEEEEEccCCc--hhhHHHHHHHHHHHhc---CCCceeeeccccc-------
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH---HTFAAVKVLQSKGN--IQNKQFLQELEVLSKI---RHPHLLLLLGACP------- 468 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~---~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l---~Hpniv~l~g~~~------- 468 (757)
+|.....||+|+||.||+|.+. +..||+|++..... .....+.+|+.+++.+ +||||++++++|.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 5778889999999999999873 46899998865432 2234567788887766 6999999999873
Q ss_pred CCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 469 DHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 469 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
...++||||+. ++|.+++.... ...+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 12389999996 68999886543 235899999999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
++...... ......||+.|+|||++....++.++|||||||++|+|+||++||........ +..+++
T Consensus 157 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~------~~~i~~ 223 (290)
T cd07862 157 ARIYSFQM-------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ------LGKILD 223 (290)
T ss_pred eEeccCCc-------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH------HHHHHH
Confidence 98654321 12345789999999999888899999999999999999999999975432221 111111
Q ss_pred hhc----CCC----------------------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 AQA----GDW----------------------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 ~~~----~~~----------------------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
... ..| ....+..+.+|+.+||+.+|++||++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 283 (290)
T cd07862 224 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 283 (290)
T ss_pred HhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence 100 001 1124567889999999999999999885
No 74
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.3e-36 Score=316.90 Aligned_cols=244 Identities=24% Similarity=0.432 Sum_probs=193.7
Q ss_pred eeccCCcEEEEEEEEC----CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCCCCH
Q 004388 410 RIGMGGYGTVYKGTFH----HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMENGSL 483 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~----~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~gsL 483 (757)
.||+|+||.||+|.+. +..||+|++..... ...+.|.+|+.++++++||||++++++|... .++||||+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 3899999999999764 34699999876532 2346689999999999999999999998654 4899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
.+++.... ..+++..+.+++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..+........
T Consensus 82 ~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~--- 153 (257)
T cd05115 82 NKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK--- 153 (257)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCcccee---
Confidence 99886433 35899999999999999999999987 99999999999999999999999999986554322111
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhh-hhcCCCChhHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILD-AQAGDWPIKETKE 641 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~~p~~~~~~ 641 (757)
......+++.|+|||++.+..++.++|||||||++|+|++ |.+||...... .+...+. ......|...+.+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 226 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-------EVMSFIEQGKRLDCPAECPPE 226 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-------HHHHHHHCCCCCCCCCCCCHH
Confidence 1122344678999999988889999999999999999996 99999643221 1111221 1223445566789
Q ss_pred HHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 642 LAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+.+++.+||..+|++||++.+ |...|+
T Consensus 227 l~~li~~c~~~~~~~Rp~~~~-i~~~l~ 253 (257)
T cd05115 227 MYALMKDCWIYKWEDRPNFAK-VEERMR 253 (257)
T ss_pred HHHHHHHHcCCChhhCcCHHH-HHHHHh
Confidence 999999999999999999984 555554
No 75
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2e-36 Score=323.14 Aligned_cols=255 Identities=25% Similarity=0.427 Sum_probs=202.6
Q ss_pred CCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
+|.....||+|+||.||+|... +..+++|.+..........|.+|++++++++||||+++++++.+.. ++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4666788999999999999753 2368888887665555677999999999999999999999986554 899
Q ss_pred EEecCCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCce
Q 004388 475 YEYMENGSLEDRLYRKNN-------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVS 541 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~ 541 (757)
|||+++++|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcE
Confidence 999999999999875431 234899999999999999999999988 9999999999999999999
Q ss_pred EEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhch
Q 004388 542 KIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDE 620 (757)
Q Consensus 542 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 620 (757)
||+|||++......... .......|++.|+|||++.+..++.++|||||||++|+|+| |+.||.......
T Consensus 163 ~l~dfg~a~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----- 233 (291)
T cd05094 163 KIGDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE----- 233 (291)
T ss_pred EECCCCcccccCCCcee----ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 99999999765432211 11233467889999999988889999999999999999999 999985432211
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
.+..+........+...+..+.+++.+||+.+|.+||++. .|+..|+.+.
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~-~v~~~l~~~~ 283 (291)
T cd05094 234 -VIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIK-EIYKILHALG 283 (291)
T ss_pred -HHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHH
Confidence 1111112222233445577899999999999999999998 5777777664
No 76
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.8e-37 Score=332.81 Aligned_cols=240 Identities=24% Similarity=0.291 Sum_probs=189.9
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|... +..||+|++.... ......+..|+.++.++ +||||+++++++.+.. ++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 5999999999999885 4589999987542 22345577899998877 7999999999986544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~---- 151 (329)
T cd05618 82 DLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---- 151 (329)
T ss_pred CHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC----
Confidence 9998876543 4889999999999999999999988 99999999999999999999999999875332111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhh--hhchhhHHHHhhhhcCCCChhHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVET--AIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||........ ......+...+.......|...+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~ 229 (329)
T cd05618 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 229 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCC
Confidence 11345799999999999999999999999999999999999999953211110 01111222222222334566677
Q ss_pred HHHHHHHHHHhhccCCCCCccc
Q 004388 640 KELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
..+.+++.+||..+|.+||+..
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~ 251 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCH 251 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCC
Confidence 8899999999999999999853
No 77
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-36 Score=347.90 Aligned_cols=256 Identities=23% Similarity=0.276 Sum_probs=204.9
Q ss_pred HHHHHhhcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC-
Q 004388 396 EEIESATLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH- 470 (757)
Q Consensus 396 ~ei~~at~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~- 470 (757)
..+.....+|.....||+|+||.||+|.. .+..||||++.... ......+.+|+.+|..++|+|++++++.+...
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 34455667899999999999999999987 46799999986543 33445688999999999999999998766321
Q ss_pred ---------ceEEEEecCCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 471 ---------GCLVYEYMENGSLEDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 471 ---------~~LV~Ey~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
.++||||+++|+|.+++.... ....+++..+..|+.|++.||.|||+.+ |+||||||+||||+.++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCC
Confidence 268999999999999886532 3346899999999999999999999987 999999999999999999
Q ss_pred eEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch
Q 004388 541 SKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE 620 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 620 (757)
+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||+||||+||+.||......
T Consensus 182 vkL~DFGls~~~~~~~~~----~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~------ 251 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSD----DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME------ 251 (496)
T ss_pred EEEEecccCeeccccccc----cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------
Confidence 999999999876532211 1123457999999999999989999999999999999999999999643211
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+..++.......|...+..+.+|+.+||..+|.+||++.+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell 295 (496)
T PTZ00283 252 EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLL 295 (496)
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 11122222222334556778999999999999999999998643
No 78
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3e-36 Score=319.90 Aligned_cols=252 Identities=21% Similarity=0.354 Sum_probs=197.7
Q ss_pred CCccceeeccCCcEEEEEEEEC--Ce----EEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc-eEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HT----FAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG-CLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~----~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-~LV~ 475 (757)
+|.....||.|+||.||+|.+. +. .+++|.+..... .....+..|+.++.+++||||++++|++.+.. ++++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~ 87 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVT 87 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEE
Confidence 5667788999999999999873 33 477787754322 23356778888999999999999999986544 7899
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++.... ..+++..+..|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.+...
T Consensus 88 e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 88 QLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 9999999999987543 35899999999999999999999987 999999999999999999999999999876533
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhc-CC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQA-GD 633 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~-~~ 633 (757)
... .......++..|++||++.++.++.++|||||||++|||+| |+.||...... .+.+++.... ..
T Consensus 163 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~ 231 (279)
T cd05111 163 DKK----YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------EVPDLLEKGERLA 231 (279)
T ss_pred Ccc----cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCCcCC
Confidence 211 11233467789999999988899999999999999999998 99999643221 1222222211 12
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
.+...+..+..++.+||..+|.+||++.+ ++..|..+.
T Consensus 232 ~~~~~~~~~~~li~~c~~~~p~~Rps~~e-l~~~l~~~~ 269 (279)
T cd05111 232 QPQICTIDVYMVMVKCWMIDENVRPTFKE-LANEFTRMA 269 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHH-HHHHHHHHH
Confidence 23345667899999999999999999984 666666554
No 79
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-36 Score=330.26 Aligned_cols=250 Identities=26% Similarity=0.368 Sum_probs=194.7
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
.++|+...+||.|+||.||++.+. +..+|+|++.... ......+.+|+.+|++++||||++++++|.+.. ++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 357888899999999999999986 4588999887542 234467899999999999999999999986554 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++...+ .+++.....++.+++.||.|||+.+ +|+||||||+|||++.++.+||+|||++..+....
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 999999999986543 4788899999999999999999753 29999999999999999999999999997654321
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh--hc---------------
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA--ID--------------- 619 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~--~~--------------- 619 (757)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||......... +.
T Consensus 159 --------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 159 --------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred --------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcc
Confidence 12347899999999998888999999999999999999999998633211000 00
Q ss_pred -----------------hhhHHHHhhhhcCC----CCh-hHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 620 -----------------EDNLAEILDAQAGD----WPI-KETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 620 -----------------~~~l~~~ld~~~~~----~p~-~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
......+.+..... .+. ..+.++.+|+.+||+.+|.+||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell 297 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLM 297 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHh
Confidence 00001111111111 111 2356799999999999999999998633
No 80
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.9e-36 Score=317.38 Aligned_cols=251 Identities=23% Similarity=0.395 Sum_probs=198.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYME 479 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~ 479 (757)
++|....+||+|+||.||+|... +..||+|.+.... ...+.+.+|+.++++++||||+++++.+.+.. ++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 46788899999999999999875 4579999876543 24567899999999999999999999886544 79999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.+++.... ...+++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+||+|||++.........
T Consensus 85 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05072 85 KGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT- 159 (261)
T ss_pred CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCcee-
Confidence 999999886543 235888899999999999999999987 999999999999999999999999999876532211
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhH
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKE 638 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~ 638 (757)
......++..|+|||++..+.++.++|||||||++|+|+| |+.||....... ....+........+...
T Consensus 160 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~ 229 (261)
T cd05072 160 ----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD------VMSALQRGYRMPRMENC 229 (261)
T ss_pred ----ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH------HHHHHHcCCCCCCCCCC
Confidence 1123456788999999988889999999999999999998 999985322111 11111111111112245
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
+..+.+++.+||..+|.+||++. ++...|+.
T Consensus 230 ~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 260 (261)
T cd05072 230 PDELYDIMKTCWKEKAEERPTFD-YLQSVLDD 260 (261)
T ss_pred CHHHHHHHHHHccCCcccCcCHH-HHHHHHhc
Confidence 67899999999999999999998 57666654
No 81
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=8.9e-37 Score=331.27 Aligned_cols=236 Identities=28% Similarity=0.352 Sum_probs=187.0
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHH-HHHhcCCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELE-VLSKIRHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~-il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|.+. +..||+|++..... .....+..|.. +++.++||||+++++.+.+.. ++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 6999999999999985 56899999865321 22234555555 467899999999999886544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~---- 151 (323)
T cd05575 82 ELFFHLQRER---SFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK---- 151 (323)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC----
Confidence 9999886543 4888899999999999999999988 99999999999999999999999999875432211
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||++||......+ .+..++.. ....+...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~-~~~~~~~~~~~ 222 (323)
T cd05575 152 --TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE------MYDNILNK-PLRLKPNISVS 222 (323)
T ss_pred --ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH------HHHHHHcC-CCCCCCCCCHH
Confidence 1234579999999999999899999999999999999999999996432111 11122221 12234456788
Q ss_pred HHHHHHHHhhccCCCCCccchhh
Q 004388 642 LAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+.+++.+|++.+|.+||+..+.+
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~ 245 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAKDDF 245 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCCCCH
Confidence 99999999999999999987433
No 82
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1e-36 Score=331.53 Aligned_cols=240 Identities=24% Similarity=0.277 Sum_probs=190.8
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|... +..||+|++.... ......+.+|+.++.++ +||||+.+++++.+.. |+||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 6999999999999875 4589999987542 22345578899999888 6999999999886544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---- 151 (327)
T cd05617 82 DLMFHMQRQR---KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD---- 151 (327)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCCC----
Confidence 9998886543 4899999999999999999999988 99999999999999999999999999875322111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||+||+|+||+.||..............+...+.......|...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 229 (327)
T cd05617 152 --TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVK 229 (327)
T ss_pred --ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHH
Confidence 113457999999999999899999999999999999999999999632211111111122222222233455566788
Q ss_pred HHHHHHHHhhccCCCCCccc
Q 004388 642 LAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~ 661 (757)
+.+++.+||..+|.+||+..
T Consensus 230 ~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHHHHHHhccCHHHcCCCC
Confidence 99999999999999999864
No 83
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-37 Score=315.60 Aligned_cols=245 Identities=26% Similarity=0.346 Sum_probs=192.7
Q ss_pred cCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCch--hhHHHHHHHHHHHhcCCCceeeecccc----cCCceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNI--QNKQFLQELEVLSKIRHPHLLLLLGAC----PDHGCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~--~~~~f~~Ev~il~~l~Hpniv~l~g~~----~~~~~LV 474 (757)
++|...++|++|+||.||+|+++. ..||+|.++.+... ..-.-++||.+|.+++|||||.+-.+. .+..|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 357777899999999999999874 58999998765422 112247999999999999999886554 4566999
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
||||+. +|..++.... .++...++..++.|++.||.|||.+. |+||||||+|+|++..|.+||+|||||+.+..
T Consensus 156 Me~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcC
Confidence 999985 8888886554 46888899999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh-hcC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA-QAG 632 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~-~~~ 632 (757)
... ..+..+-|.+|.|||.+.+. .|+...|+||+|||+.||++++|-|.......+.- .+..++-. .-.
T Consensus 230 p~k------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~---~If~llGtPte~ 300 (419)
T KOG0663|consen 230 PLK------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLD---KIFKLLGTPSEA 300 (419)
T ss_pred Ccc------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHH---HHHHHhCCCccc
Confidence 532 34667899999999977654 69999999999999999999999997554433211 11111100 001
Q ss_pred CCC--------------------------hh-HHHHHHHHHHHHhhccCCCCCccch
Q 004388 633 DWP--------------------------IK-ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 633 ~~p--------------------------~~-~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.|| .. .+..-.+|+...+.+||++|-|+.+
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~ 357 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAED 357 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHH
Confidence 121 11 2356788999999999999999885
No 84
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.9e-37 Score=331.02 Aligned_cols=233 Identities=24% Similarity=0.307 Sum_probs=189.1
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|... ++.||||++.... ......+..|+.++..+ +||||+++++++.+.. ++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 6999999999999885 5689999987532 23345677899999876 6999999999986554 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~---- 151 (320)
T cd05590 82 DLMFHIQKSR---RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK---- 151 (320)
T ss_pred hHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC----
Confidence 9999886543 4888999999999999999999988 99999999999999999999999999875432211
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||....... +...+.......|...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-------~~~~i~~~~~~~~~~~~~~ 222 (320)
T cd05590 152 --TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-------LFEAILNDEVVYPTWLSQD 222 (320)
T ss_pred --cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-------HHHHHhcCCCCCCCCCCHH
Confidence 1234579999999999998889999999999999999999999996443211 1122222222344456788
Q ss_pred HHHHHHHHhhccCCCCCccc
Q 004388 642 LAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~ 661 (757)
+.+++.+||+.+|.+||+..
T Consensus 223 ~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred HHHHHHHHcccCHHHCCCCC
Confidence 99999999999999999984
No 85
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.6e-36 Score=318.07 Aligned_cols=250 Identities=22% Similarity=0.372 Sum_probs=194.0
Q ss_pred ccceeeccCCcEEEEEEEECCe----EEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC--------Cc
Q 004388 406 SENLRIGMGGYGTVYKGTFHHT----FAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD--------HG 471 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~~~----~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--------~~ 471 (757)
....+||+|+||.||+|.+... .+|+|.+.... ......|.+|+.+++.++||||++++++|.. ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4567899999999999987543 58999876542 3345678899999999999999999998632 23
Q ss_pred eEEEEecCCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 472 CLVYEYMENGSLEDRLYRKN---NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
++||||+++|+|.+++.... ....+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence 79999999999998875321 2235899999999999999999999987 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHh
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEIL 627 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~l 627 (757)
++.+....... ......+++.|++||+.....++.++|||||||++|+|++ |+.||...... .+.+.+
T Consensus 159 ~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-------~~~~~~ 227 (272)
T cd05075 159 SKKIYNGDYYR----QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-------EIYDYL 227 (272)
T ss_pred ccccCccccee----cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHH
Confidence 98765432110 1123356778999999998889999999999999999999 88998643211 111111
Q ss_pred h-hhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 628 D-AQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 628 d-~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
. ......+...+..+.+++.+||..+|.+||++.+ ++..|+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~-l~~~l~~ 270 (272)
T cd05075 228 RQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFET-LRCELEK 270 (272)
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH-HHHHHHh
Confidence 1 1111233456678999999999999999999984 6555554
No 86
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-36 Score=338.80 Aligned_cols=242 Identities=24% Similarity=0.323 Sum_probs=186.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
.+|...++||+|+||.||++.+. +..||+|... ...+.+|+.+|++++|||||++++++... .|+||||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 46888899999999999999885 4589999643 23577899999999999999999988544 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
. ++|..++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 166 ~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 166 K-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred C-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 5 78888876543 4889999999999999999999987 99999999999999999999999999975432211
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh--------------------
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI-------------------- 618 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~-------------------- 618 (757)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||..........
T Consensus 238 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 238 ----NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred ----cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 11234589999999999998899999999999999999999998764221110000
Q ss_pred --c-hhhHHHHh----hhh------cCCCC--hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 619 --D-EDNLAEIL----DAQ------AGDWP--IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 619 --~-~~~l~~~l----d~~------~~~~p--~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. ...+.... ... ...|. ...+.++.+|+.+||+.||.+||++.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~e 372 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEA 372 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHH
Confidence 0 00011111 000 00111 124568999999999999999999985
No 87
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.3e-37 Score=336.18 Aligned_cols=239 Identities=26% Similarity=0.402 Sum_probs=185.2
Q ss_pred ccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCC
Q 004388 406 SENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
...++||.|+||.||+|.+. +..||||++..... .....|.+|+++|+.++||||+++++++.+.. ++||||+++
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 156 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG 156 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence 34467999999999999885 56999999865432 34567899999999999999999999986654 799999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+.. ...+..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.....
T Consensus 157 ~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--- 223 (353)
T PLN00034 157 GSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--- 223 (353)
T ss_pred Ccccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc---
Confidence 9986532 2456677889999999999999988 99999999999999999999999999987643221
Q ss_pred ccccccCCcccccCCCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRT-----GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
......||+.|+|||++.. ...+.++|||||||++|||++|+.||......... .....+........+
T Consensus 224 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~ 297 (353)
T PLN00034 224 ---PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWA---SLMCAICMSQPPEAP 297 (353)
T ss_pred ---cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHH---HHHHHHhccCCCCCC
Confidence 1134579999999998743 23456899999999999999999999732211100 001111111122234
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
...+..+.+|+.+||..+|.+||++.++
T Consensus 298 ~~~~~~l~~li~~~l~~~P~~Rpt~~el 325 (353)
T PLN00034 298 ATASREFRHFISCCLQREPAKRWSAMQL 325 (353)
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 4567889999999999999999999853
No 88
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.4e-37 Score=331.19 Aligned_cols=233 Identities=25% Similarity=0.319 Sum_probs=188.0
Q ss_pred eeccCCcEEEEEEEECC--eEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFHH--TFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|...+ ..||||++.... ......+..|..++..+ +||||+++++++.+.. ||||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 58999999999999864 589999987542 22345577899999876 7999999999986544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~---- 151 (321)
T cd05591 82 DLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV---- 151 (321)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCCc----
Confidence 9999886543 4888999999999999999999988 99999999999999999999999999875432211
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||++||...... ..+..+. ......|...+.+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~------~~~~~i~-~~~~~~p~~~~~~ 222 (321)
T cd05591 152 --TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED------DLFESIL-HDDVLYPVWLSKE 222 (321)
T ss_pred --cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH------HHHHHHH-cCCCCCCCCCCHH
Confidence 123457999999999999889999999999999999999999999644321 1111222 1122334456788
Q ss_pred HHHHHHHHhhccCCCCCccc
Q 004388 642 LAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~ 661 (757)
+.+++.+||+.+|.+||+..
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~ 242 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCV 242 (321)
T ss_pred HHHHHHHHhccCHHHcCCCC
Confidence 99999999999999999643
No 89
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-37 Score=334.46 Aligned_cols=247 Identities=24% Similarity=0.398 Sum_probs=208.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch--hhHHHHHHHHHHHhcCCCceeeecccccCCc---eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI--QNKQFLQELEVLSKIRHPHLLLLLGACPDHG---CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~--~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~---~LV~ 475 (757)
.+|.....||+|+||.++.++.+ +..+++|.+...... .+....+|+.++++++|||||.+.+.|.+.. ||||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46777889999999999987764 568999988765432 3345788999999999999999999997655 7899
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
+|++||+|.+.+.+.. ..-++...+..|+.|++.|+.|||... |+|||||+.|||++.++.+||+|||+|+.+...
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998765 345899999999999999999999877 999999999999999999999999999998866
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
.+. ....+|||.||.||.+.+.+|+.|+|||||||++|||++-+++|...+.. +...++........|
T Consensus 160 ~~~------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~------~Li~ki~~~~~~Plp 227 (426)
T KOG0589|consen 160 DSL------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS------ELILKINRGLYSPLP 227 (426)
T ss_pred hhh------hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH------HHHHHHhhccCCCCC
Confidence 432 24569999999999999999999999999999999999999999644322 122333333345567
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccchhhh
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKNQVL 665 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl 665 (757)
..++.+|..|+..|+..+|..||++.+.+.
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCCHHHHhh
Confidence 788999999999999999999999986443
No 90
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-36 Score=325.15 Aligned_cols=247 Identities=21% Similarity=0.347 Sum_probs=189.5
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
.++|...++||.|+||.||+|... +..||||++..... .....+.+|+.+++.++||||+++++++.+.. ++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 357888999999999999999985 56899999875432 23345788999999999999999999986544 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+. ++|.+++.... ..++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 996 68888776533 34788899999999999999999988 9999999999999999999999999987543221
Q ss_pred CCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh-hcCCC
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA-QAGDW 634 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~-~~~~~ 634 (757)
. ......||+.|+|||++.+ ..++.++|||||||++|+|+||++||.........+.. +...+.. ....|
T Consensus 158 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~ 229 (303)
T cd07869 158 H------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLER--IFLVLGTPNEDTW 229 (303)
T ss_pred c------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHH--HHHHhCCCChhhc
Confidence 1 1234578999999998764 45889999999999999999999999754332221110 0000000 00000
Q ss_pred ------------------C---------hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 635 ------------------P---------IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 635 ------------------p---------~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+ ...+..+.+|+.+|++.+|++||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~ 284 (303)
T cd07869 230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQA 284 (303)
T ss_pred cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHH
Confidence 0 012356889999999999999999875
No 91
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3e-36 Score=319.78 Aligned_cols=241 Identities=24% Similarity=0.330 Sum_probs=188.4
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSL 483 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL 483 (757)
||+|+||.||++... +..||+|.+.... ......+..|++++++++||||+++++++.+.. ++||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999875 6699999886432 122344567999999999999999999886543 899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
.+++..... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~------ 150 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT------ 150 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCce------
Confidence 988865432 35889999999999999999999988 99999999999999999999999999976653221
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELA 643 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~ 643 (757)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ........+...........+.++.
T Consensus 151 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T cd05607 151 -ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTLEDEVKFEHQNFTEESK 227 (277)
T ss_pred -eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhhccccccccccCCHHHH
Confidence 1234789999999999888899999999999999999999999964321100 0111111111111111123567899
Q ss_pred HHHHHHhhccCCCCCccchhh
Q 004388 644 ALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 644 ~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+|+.+||+.+|.+||++.+.+
T Consensus 228 ~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 228 DICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred HHHHHHhccCHhhCCCCccch
Confidence 999999999999999997543
No 92
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.3e-36 Score=316.33 Aligned_cols=249 Identities=27% Similarity=0.460 Sum_probs=199.6
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYME 479 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~ 479 (757)
+|...++||.|+||.||+|.+. ++.||+|++... ......+.+|+.++.+++||||++++++|.... ++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4677789999999999999875 568999998754 334567899999999999999999999986543 79999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.........
T Consensus 86 ~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~- 160 (263)
T cd05052 86 YGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT- 160 (263)
T ss_pred CCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceee-
Confidence 999999886543 245899999999999999999999987 999999999999999999999999999876532211
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhh-hcCCCChh
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDA-QAGDWPIK 637 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~-~~~~~p~~ 637 (757)
......++..|+|||++.+..++.++|||||||++|||+| |..||...... .+...+.. .....|..
T Consensus 161 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~ 229 (263)
T cd05052 161 ----AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------QVYELLEKGYRMERPEG 229 (263)
T ss_pred ----ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCCCCCCCCC
Confidence 1112234678999999988899999999999999999998 99998643211 11122221 12334555
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
.+..+.+++.+||..+|.+||++. .++..|+.
T Consensus 230 ~~~~~~~li~~cl~~~p~~Rp~~~-~l~~~l~~ 261 (263)
T cd05052 230 CPPKVYELMRACWQWNPSDRPSFA-EIHQAFET 261 (263)
T ss_pred CCHHHHHHHHHHccCCcccCCCHH-HHHHHHHh
Confidence 678999999999999999999998 46666654
No 93
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.5e-36 Score=331.68 Aligned_cols=256 Identities=26% Similarity=0.431 Sum_probs=200.1
Q ss_pred cCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCCc-hhhHHHHHHHHHHHhc-CCCceeeecccccCC---
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKGN-IQNKQFLQELEVLSKI-RHPHLLLLLGACPDH--- 470 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~--- 470 (757)
.+|...+.||.|+||.||+|...+ +.||+|++..... .....+..|+.++.++ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 357788899999999999997532 4799999875432 2345678899999999 899999999988543
Q ss_pred ceEEEEecCCCCHHHHHhhcCC----------------------------------------------------------
Q 004388 471 GCLVYEYMENGSLEDRLYRKNN---------------------------------------------------------- 492 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~---------------------------------------------------------- 492 (757)
.+++|||+++|+|.+++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 3789999999999998864321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcccc
Q 004388 493 TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTL 572 (757)
Q Consensus 493 ~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~ 572 (757)
..+++|..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....... ......++.
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~----~~~~~~~~~ 239 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----RKGDARLPL 239 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchh----hccCCCCCc
Confidence 126899999999999999999999987 9999999999999999999999999998765332211 122345678
Q ss_pred cCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhHHHHHHHHHHHHh
Q 004388 573 CYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKETKELAALGLSCA 650 (757)
Q Consensus 573 ~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~~~~l~~Li~~Cl 650 (757)
.|+|||++.+..++.++|||||||+||+|+| |..||...... ..+...+... ....|...+..+.+++.+||
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 313 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID------EEFCRRLKEGTRMRAPEYATPEIYSIMLDCW 313 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc------HHHHHHHhccCCCCCCccCCHHHHHHHHHHc
Confidence 8999999999999999999999999999998 99998532211 1111222111 12223445678999999999
Q ss_pred hccCCCCCccchhhhhHHHHHH
Q 004388 651 ELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 651 ~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
+.+|.+||++. +++..|+++.
T Consensus 314 ~~~p~~RPs~~-ell~~l~~~~ 334 (337)
T cd05054 314 HNNPEDRPTFS-ELVEILGDLL 334 (337)
T ss_pred cCChhhCcCHH-HHHHHHHHHH
Confidence 99999999998 5777776653
No 94
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.5e-37 Score=338.67 Aligned_cols=247 Identities=23% Similarity=0.265 Sum_probs=189.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|...++||.|+||.||++... +..||||++.... ......+.+|+.++.+++||||+++++++.+.. ||||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888899999999999999874 5689999986432 223456788999999999999999999987654 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||++||+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999886543 4888889999999999999999988 999999999999999999999999999643211
Q ss_pred CCCc----------cc-------------------------------cccccCCcccccCCCccccccCCCCCcchhhhH
Q 004388 556 PSFV----------ST-------------------------------TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAY 594 (757)
Q Consensus 556 ~~~~----------~~-------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSl 594 (757)
.... .. .......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 0000 00 000012479999999999988889999999999
Q ss_pred HHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-cCCCCh--hHHHHHHHHHHHHhhccCCCC---Cccch
Q 004388 595 GMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPI--KETKELAALGLSCAELRRKDR---PDLKN 662 (757)
Q Consensus 595 Gvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~--~~~~~l~~Li~~Cl~~~p~~R---Ps~~~ 662 (757)
||+||||+||++||....... .+..++... ...+|. ..+..+.+|+.+|+. +|.+| |++.+
T Consensus 235 Gvil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~ 301 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHE------TYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHE 301 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHH------HHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence 999999999999996433211 111122110 111222 356789999999997 67765 46654
No 95
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=9.6e-37 Score=338.84 Aligned_cols=248 Identities=24% Similarity=0.330 Sum_probs=191.4
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
.|.....||+|+||.||+|... +..||||++.... ......+.+|+.+|.+++||||+++++++.+.. ++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5778889999999999999885 4589999987542 223456889999999999999999999997654 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|++||+|.+++.+.. .+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987543 4888889999999999999999988 9999999999999999999999999986432110
Q ss_pred CCc-----------------------------------------cccccccCCcccccCCCccccccCCCCCcchhhhHH
Q 004388 557 SFV-----------------------------------------STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYG 595 (757)
Q Consensus 557 ~~~-----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlG 595 (757)
... .........+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 000 000011235799999999999888899999999999
Q ss_pred HHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-cCCCC--hhHHHHHHHHHHH--HhhccCCCCCccchh
Q 004388 596 MVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-AGDWP--IKETKELAALGLS--CAELRRKDRPDLKNQ 663 (757)
Q Consensus 596 vil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p--~~~~~~l~~Li~~--Cl~~~p~~RPs~~~~ 663 (757)
|++|||+||++||........ ...++... ....| ...+.++.+|+.+ |+..+|..||++.++
T Consensus 236 ~il~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTET------QLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI 302 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHH------HHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 999999999999975432211 11122111 11122 2356788999988 445566679998753
No 96
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.5e-36 Score=329.61 Aligned_cols=244 Identities=23% Similarity=0.272 Sum_probs=194.5
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcC-CCceeeecccccCC--ceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIR-HPHLLLLLGACPDH--GCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~--~~LV~ 475 (757)
+|+..+.||+|+||.||+|... +..||+|++.... ......+..|+.++..+. ||+|+.+++++.+. .++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677789999999999999875 5689999987542 223355778999998886 56777888887554 48999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||++||+|.+++...+ .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999886543 4899999999999999999999988 999999999999999999999999998754322
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
.. ......||+.|+|||++.+..++.++|||||||++|+|+||++||...... ..+..++ .....+|
T Consensus 155 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~i~-~~~~~~p 221 (323)
T cd05615 155 GV------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED------ELFQSIM-EHNVSYP 221 (323)
T ss_pred Cc------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHH-hCCCCCC
Confidence 11 123457999999999999888999999999999999999999999643221 1112222 2223456
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccchhhhh
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKNQVLP 666 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~ 666 (757)
...+..+.+++.+||..+|.+|++..+....
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 252 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGCGPEGER 252 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCCCCCCHH
Confidence 6677889999999999999999997643333
No 97
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.5e-37 Score=337.69 Aligned_cols=244 Identities=24% Similarity=0.293 Sum_probs=191.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|...+.||.|+||.||+|... ++.||||++.... ......+.+|+.+|..++||||+++++++.+.. +|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888899999999999999885 5699999987532 223455788999999999999999999986654 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++...+ .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999987643 4889999999999999999999988 999999999999999999999999999765422
Q ss_pred CCCcc--------------------------------ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh
Q 004388 556 PSFVS--------------------------------TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT 603 (757)
Q Consensus 556 ~~~~~--------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt 603 (757)
..... ........+||+.|+|||++....++.++|||||||++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 11000 0001123479999999999988899999999999999999999
Q ss_pred CCCCccccchhhhhhchhhHHHHhhhhc-CCCC--hhHHHHHHHHHHHHhhccCCCCCc
Q 004388 604 AKPAIAITHKVETAIDEDNLAEILDAQA-GDWP--IKETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 604 G~~Pf~~~~~~~~~~~~~~l~~~ld~~~-~~~p--~~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
|.+||........ +..++.... ...| ...+..+.+|+.+|+. +|.+|++
T Consensus 235 G~~Pf~~~~~~~~------~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~ 286 (364)
T cd05599 235 GYPPFCSDNPQET------YRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLG 286 (364)
T ss_pred CCCCCCCCCHHHH------HHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence 9999975432211 111221110 0111 2346788999999996 9999998
No 98
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-36 Score=329.03 Aligned_cols=233 Identities=25% Similarity=0.290 Sum_probs=189.3
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|.+. +..||||++.... ......+..|+.++..+ +||||+++++++.+.. |+||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 5999999999999885 4589999987542 22345577899999888 6999999999886544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---- 151 (318)
T cd05570 82 DLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV---- 151 (318)
T ss_pred CHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCC----
Confidence 9998886543 4899999999999999999999988 99999999999999999999999999875322111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||...... .+...+.......|...+..
T Consensus 152 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~ 222 (318)
T cd05570 152 --TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-------ELFQSILEDEVRYPRWLSKE 222 (318)
T ss_pred --cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-------HHHHHHHcCCCCCCCcCCHH
Confidence 113347999999999999999999999999999999999999999643321 11122222223345556788
Q ss_pred HHHHHHHHhhccCCCCCccc
Q 004388 642 LAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~ 661 (757)
+.+|+.+||..+|.+||++.
T Consensus 223 ~~~li~~~l~~dP~~R~s~~ 242 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCL 242 (318)
T ss_pred HHHHHHHHccCCHHHcCCCC
Confidence 99999999999999999984
No 99
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.9e-36 Score=321.69 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=189.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
.+|....+||.|+||.||+|... +..||+|++.... ......+.+|+.++++++||||+++++++.+.. ++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 35788889999999999999875 5689999986543 223456789999999999999999999986654 799999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++ |+|.+++...+ ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LD-SDLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CC-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 97 48988886543 24788899999999999999999988 99999999999999999999999999976543221
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc-----------------
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID----------------- 619 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~----------------- 619 (757)
......||+.|+|||++.+ ..++.++|||||||++|+|+||++||......+....
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred ------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 1134578999999998765 5689999999999999999999999964322111000
Q ss_pred -hhhHHHHhhhhc-C----CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 620 -EDNLAEILDAQA-G----DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 620 -~~~l~~~ld~~~-~----~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+...+.+.. . ......+.++.+|+.+|+..+|.+||++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~ 281 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEA 281 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 000000000000 0 001123567899999999999999999885
No 100
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.9e-36 Score=315.57 Aligned_cols=253 Identities=23% Similarity=0.372 Sum_probs=197.6
Q ss_pred CccceeeccCCcEEEEEEEECC-----eEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC--C-----
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH-----TFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD--H----- 470 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~-----~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~----- 470 (757)
|...+.||+|+||.||+|.... ..||+|.+.... ......+.+|+.+++.++||||+++++++.+ .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4566789999999999998742 479999987543 2334678999999999999999999998733 1
Q ss_pred -ceEEEEecCCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeee
Q 004388 471 -GCLVYEYMENGSLEDRLYRKN---NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDV 546 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DF 546 (757)
.++||||+++|+|..++.... ....+++.....++.|++.||.|||+.+ |+||||||+|||+++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 379999999999999886432 2235899999999999999999999987 999999999999999999999999
Q ss_pred cCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHH
Q 004388 547 GLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 547 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
|+++.+....... ......++..|+|||++.+..++.++|||||||++|||++ |.+||...... ..+..
T Consensus 158 g~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~------~~~~~ 227 (273)
T cd05035 158 GLSKKIYSGDYYR----QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH------EIYDY 227 (273)
T ss_pred cceeecccccccc----ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH
Confidence 9998765432211 1122345678999999988889999999999999999999 88998543221 11122
Q ss_pred HhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 626 ILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 626 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
+........|...+..+.+++.+||..+|.+||++. +++..|+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-e~~~~l~~~ 272 (273)
T cd05035 228 LRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFT-KLREVLENI 272 (273)
T ss_pred HHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHhh
Confidence 222222234456678999999999999999999998 466665543
No 101
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.8e-36 Score=312.57 Aligned_cols=243 Identities=28% Similarity=0.406 Sum_probs=198.9
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||+|+||.||+|... +..|++|.+... .......+.+|+.++++++||||+++++++.+.. ++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677788999999999999884 568999988643 2334567889999999999999999999987654 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++++|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999987642 346889999999999999999999987 99999999999999999999999999987654321
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
......|++.|+|||++.++.++.++|+|||||++|+|+||+.||....... ....+........+..
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~ 224 (256)
T cd08529 157 ------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA------LILKIIRGVFPPVSQM 224 (256)
T ss_pred ------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCCCCccc
Confidence 1133468899999999998889999999999999999999999997443211 1122222222233335
Q ss_pred HHHHHHHHHHHHhhccCCCCCccch
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..+.+++.+||+.+|.+||++.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ 249 (256)
T cd08529 225 YSQQLAQLIDQCLTKDYRQRPDTFQ 249 (256)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHH
Confidence 6788999999999999999999985
No 102
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.3e-36 Score=318.89 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=197.6
Q ss_pred ccceeeccCCcEEEEEEEE------CCeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC----ceEE
Q 004388 406 SENLRIGMGGYGTVYKGTF------HHTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCLV 474 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~------~~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~LV 474 (757)
.....||+|+||.||++.+ .+..||+|++..... .....|.+|+++|++++||||++++++|... .++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778899999999988764 245899999876532 3456788999999999999999999987532 3799
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|.+++... .+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 87 MEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCC
Confidence 9999999999988643 3899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccch-hhhh-------hchhhHHHH
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHK-VETA-------IDEDNLAEI 626 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~-~~~~-------~~~~~l~~~ 626 (757)
...... ......++..|+|||++....++.++||||||+++|+|+||..||..... .... .....+.+.
T Consensus 160 ~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 160 GHEYYR---VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cchhhc---cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 321100 01223456779999999888899999999999999999999999853221 1110 011122222
Q ss_pred hhhhc-CCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 627 LDAQA-GDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 627 ld~~~-~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
++... ...+...+..+.+++.+||+.+|.+||++. .++..|+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~-~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFR-SLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHH-HHHHHHHHhh
Confidence 22211 122345578999999999999999999998 4667766553
No 103
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.7e-36 Score=319.39 Aligned_cols=250 Identities=22% Similarity=0.417 Sum_probs=196.3
Q ss_pred CCccceeeccCCcEEEEEEEE------CCeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTF------HHTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLV 474 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~------~~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV 474 (757)
+|+...+||+|+||.||+|.+ .+..+++|.+.... ......|.+|+.+++.++||||+++++++... .++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 466778899999999999985 23588999887543 23346788999999999999999999997654 4899
Q ss_pred EEecCCCCHHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 475 YEYMENGSLEDRLYRKNN--------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~--------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
|||+++|+|.+++..... ...+++.....++.+++.||.|||+.+ |+||||||+|||++.++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCc
Confidence 999999999999864321 224788899999999999999999987 999999999999999999
Q ss_pred eEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhc
Q 004388 541 SKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAID 619 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 619 (757)
+||+|||+++........ .......++..|+|||++.++.++.++|||||||++|||+| |.+||.....
T Consensus 163 ~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~------ 232 (283)
T cd05090 163 VKISDLGLSREIYSADYY----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN------ 232 (283)
T ss_pred EEeccccccccccCCcce----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 999999999876432211 11123356788999999988889999999999999999998 9999853221
Q ss_pred hhhHHHHhhhh-cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 620 EDNLAEILDAQ-AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 620 ~~~l~~~ld~~-~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
..+.+.+... ....+...+..+.+++.+||..+|.+||++.+ |+..|
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~-i~~~l 280 (283)
T cd05090 233 -QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKD-IHTRL 280 (283)
T ss_pred -HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHH-HHHHh
Confidence 1112222221 22334456788999999999999999999985 55544
No 104
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.2e-36 Score=319.82 Aligned_cols=260 Identities=23% Similarity=0.361 Sum_probs=199.2
Q ss_pred cCCccceeeccCCcEEEEEEEEC------CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC----Cce
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH------HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD----HGC 472 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~------~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~----~~~ 472 (757)
.+|.....||+|+||.||+|... +..||+|.+..........|.+|++++.+++||||+++++++.. ..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46777889999999999999752 45899999877665566789999999999999999999997632 247
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|||..+ |+||||||+|||++.++.+||+|||++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 9999999999999986543 34899999999999999999999988 999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchh-hhhhc--------hhhH
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKV-ETAID--------EDNL 623 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~-~~~~~--------~~~l 623 (757)
........ ......++..|+|||++.++.++.++|||||||++|||++|..|+...... ..... ...+
T Consensus 159 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 159 PQDKEYYK---VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred cCCCccee---ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 54332111 011223456699999998888999999999999999999997765422111 00000 0112
Q ss_pred HHHhhhhc-CCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 624 AEILDAQA-GDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 624 ~~~ld~~~-~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.+.+.... ...+...+..+.+|+.+||..+|.+||++. +|+..|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFS-ELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHhc
Confidence 22222211 112334567899999999999999999998 466666543
No 105
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.2e-36 Score=314.16 Aligned_cols=246 Identities=28% Similarity=0.462 Sum_probs=195.8
Q ss_pred eeeccCCcEEEEEEEECC-----eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCCC
Q 004388 409 LRIGMGGYGTVYKGTFHH-----TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMENG 481 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~-----~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~g 481 (757)
++||+|+||.||+|.+.. ..+|+|.+..... .....+.+|+.+++++.||||+++++++... .++||||+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 369999999999998632 4799999876544 2456789999999999999999999988644 48999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..++.|++.||.|||..+ ++||||||+|||++.++.+||+|||+++.+........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~- 153 (257)
T cd05060 81 PLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR- 153 (257)
T ss_pred cHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccc-
Confidence 9999997544 5899999999999999999999988 99999999999999999999999999987654332111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKET 639 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~~ 639 (757)
......++..|+|||.+.+..++.++|||||||++|+|+| |.+||...... .+...+... ....|...+
T Consensus 154 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 224 (257)
T cd05060 154 --ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-------EVIAMLESGERLPRPEECP 224 (257)
T ss_pred --cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHcCCcCCCCCCCC
Confidence 1122334678999999988889999999999999999998 99999643221 111122111 123344567
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..+.+++.+||..+|.+||++. .++..|+.+
T Consensus 225 ~~l~~li~~cl~~~p~~Rp~~~-~l~~~l~~~ 255 (257)
T cd05060 225 QEIYSIMLSCWKYRPEDRPTFS-ELESTFRRD 255 (257)
T ss_pred HHHHHHHHHHhcCChhhCcCHH-HHHHHHHhc
Confidence 8899999999999999999998 466666543
No 106
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.7e-36 Score=314.56 Aligned_cols=250 Identities=28% Similarity=0.421 Sum_probs=199.0
Q ss_pred hcCCccceeeccCCcEEEEEEEECC-eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
..+|.....||.|+||.||+|.+.+ +.||+|.+.... ...+.|.+|+.++++++||||+++++++... .++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 3468888999999999999998754 579999987543 3456789999999999999999999988654 38999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+......
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999986544 345899999999999999999999987 999999999999999999999999999876532110
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~ 636 (757)
......++..|+|||++.+..++.++||||||+++|+|+| |+.||...... .+...++.. ....+.
T Consensus 160 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~ 227 (261)
T cd05068 160 -----AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-------EVLQQVDQGYRMPCPP 227 (261)
T ss_pred -----ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcCCCCCCCC
Confidence 1122234568999999988889999999999999999999 99999643211 111122211 112344
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
..+..+.+++.+|+..+|.+||++.+ +...|+
T Consensus 228 ~~~~~~~~li~~~l~~~P~~Rp~~~~-l~~~l~ 259 (261)
T cd05068 228 GCPKELYDIMLDCWKEDPDDRPTFET-LQWKLE 259 (261)
T ss_pred cCCHHHHHHHHHHhhcCcccCCCHHH-HHHHHh
Confidence 56788999999999999999999984 555554
No 107
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-36 Score=318.00 Aligned_cols=247 Identities=26% Similarity=0.316 Sum_probs=200.6
Q ss_pred CCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchh---hHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQ---NKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~---~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
.|...++||.|.-|+||++.+.+ ..+|+|++....... ..+.+.|-+||+.++||.++.||..+.... |||||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45556789999999999999987 489999998765433 345677999999999999999999996544 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
||+||+|..+++++. ...++...+..++.+|+.||+|||..| ||+|||||+||||-++|++.|+||.|+......+
T Consensus 158 yCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred cCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999877655 356899999999999999999999998 9999999999999999999999999986543211
Q ss_pred CC--------------------------------------------------ccccccccCCcccccCCCccccccCCCC
Q 004388 557 SF--------------------------------------------------VSTTYKNTGPVGTLCYIDPEYQRTGLIS 586 (757)
Q Consensus 557 ~~--------------------------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s 586 (757)
.. ..+..+...++||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 00 0011223346899999999999999999
Q ss_pred CcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc--CCCChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 587 PKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA--GDWPIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 587 ~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~--~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.++|+|+|||+|||||.|..||..... +..+..++-... +..| ..+..+.+||.+.|.+||.+|-...
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~------~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNN------KETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCc------hhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccc
Confidence 999999999999999999999975543 334455554332 2222 5678999999999999999998844
No 108
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-36 Score=317.77 Aligned_cols=252 Identities=27% Similarity=0.465 Sum_probs=204.8
Q ss_pred hcCCccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
..+|...++||.|+||.||+|.+. +..+++|++..........+..|+.+++.++||||+++++++.+.. ++||||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 456788889999999999999875 4689999988766555677899999999999999999999986544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|.+++.... ...+++..+..++.+|+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~- 159 (261)
T cd05148 85 EKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY- 159 (261)
T ss_pred ccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc-
Confidence 9999999987643 345899999999999999999999988 99999999999999999999999999987643221
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
......++..|++||++..+.++.++||||||+++|+|++ |+.||...... ..+..+........+..
T Consensus 160 -----~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~ 228 (261)
T cd05148 160 -----LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH------EVYDQITAGYRMPCPAK 228 (261)
T ss_pred -----cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH------HHHHHHHhCCcCCCCCC
Confidence 1123456788999999988889999999999999999998 89999543211 11222222222333456
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
.+..+.+++.+||..+|.+||++. .++..|+.
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rpt~~-~l~~~L~~ 260 (261)
T cd05148 229 CPQEIYKIMLECWAAEPEDRPSFK-ALREELDN 260 (261)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHH-HHHHHHhc
Confidence 678899999999999999999998 46666653
No 109
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.3e-36 Score=315.41 Aligned_cols=246 Identities=24% Similarity=0.410 Sum_probs=196.4
Q ss_pred CCccceeeccCCcEEEEEEEECCe-EEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHT-FAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~-~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
+|.....||+|+||.||+|.+.+. .+|+|.+.... .....|.+|+.++.+++||||++++++|.+.. ++||||+.+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 466778899999999999988654 69999876543 33467999999999999999999999986544 899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++..... .+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05113 84 GCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--- 155 (256)
T ss_pred CcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce---
Confidence 999998865432 5899999999999999999999987 99999999999999999999999999986643221
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
.......++..|++||++.++.++.++|||||||++|+|+| |+.||....... ....+........+...+
T Consensus 156 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~ 227 (256)
T cd05113 156 --TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE------TVEKVSQGLRLYRPHLAS 227 (256)
T ss_pred --eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH------HHHHHhcCCCCCCCCCCC
Confidence 01123356778999999988889999999999999999999 999986332211 111122222222344457
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
..+.+++.+||..+|.+||++.+ ++..
T Consensus 228 ~~~~~li~~cl~~~p~~Rp~~~~-ll~~ 254 (256)
T cd05113 228 EKVYAIMYSCWHEKAEERPTFQQ-LLSS 254 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHH-HHHh
Confidence 88999999999999999999984 4443
No 110
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-36 Score=328.89 Aligned_cols=238 Identities=28% Similarity=0.330 Sum_probs=187.3
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHH-HHHhcCCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELE-VLSKIRHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~-il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|... +..||+|++..... .....+..|.. +++.++||||+++++++.+.. ++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999985 56899999865321 22334555554 578899999999999886544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+.+.... .++...+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---- 151 (321)
T cd05603 82 ELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE---- 151 (321)
T ss_pred CHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC----
Confidence 9998886533 4778888899999999999999987 99999999999999999999999999875322111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|+||++||...+... ....++ ......|......
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~-~~~~~~~~~~~~~ 222 (321)
T cd05603 152 --TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ------MYDNIL-HKPLQLPGGKTVA 222 (321)
T ss_pred --ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH------HHHHHh-cCCCCCCCCCCHH
Confidence 1234579999999999988889999999999999999999999996432111 111122 1223345556788
Q ss_pred HHHHHHHHhhccCCCCCccchhhhh
Q 004388 642 LAALGLSCAELRRKDRPDLKNQVLP 666 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~vl~ 666 (757)
+.+++.+|++.+|.+||+....+++
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~ 247 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAKADFLE 247 (321)
T ss_pred HHHHHHHHccCCHhhcCCCCCCHHH
Confidence 9999999999999999997654443
No 111
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.4e-36 Score=320.13 Aligned_cols=253 Identities=25% Similarity=0.461 Sum_probs=199.0
Q ss_pred CCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
+|.....||+|+||.||+|.... ..+++|.+..... .....+.+|+.+++.++||||+++++.|.... ++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 36677889999999999998642 4688888765432 33467889999999999999999999986544 89
Q ss_pred EEEecCCCCHHHHHhhcC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCC
Q 004388 474 VYEYMENGSLEDRLYRKN---------------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGN 532 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~---------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~N 532 (757)
||||+.+|+|.+++.... ...++++..++.++.|++.||.|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999886421 1235889999999999999999999987 9999999999
Q ss_pred eeecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCcccc
Q 004388 533 ILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAIT 611 (757)
Q Consensus 533 ILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~ 611 (757)
||+++++.+||+|||+++......... ......++..|+|||++.+..++.++||||||+++|+|+| |..||...
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYV----KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchh----cccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999999998654332211 1123356778999999888889999999999999999999 99998533
Q ss_pred chhhhhhchhhHHHHhhhh-cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 612 HKVETAIDEDNLAEILDAQ-AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 612 ~~~~~~~~~~~l~~~ld~~-~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.. ..+.+.+... ....|...+..+.+++.+|++.+|.+||++. +++..|+.+
T Consensus 234 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~-~i~~~l~~~ 286 (290)
T cd05045 234 AP-------ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFA-DISKELEKM 286 (290)
T ss_pred CH-------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHH-HHHHHHHHH
Confidence 21 1222222221 1223445677899999999999999999998 466666654
No 112
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-37 Score=337.91 Aligned_cols=253 Identities=28% Similarity=0.433 Sum_probs=204.2
Q ss_pred CCccceeeccCCcEEEEEEEECC------eEEEEEEEccC---CchhhHHHHHHHHHHHhcCCCceeeecccccCC--ce
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH------TFAAVKVLQSK---GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GC 472 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~------~~vAvK~l~~~---~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~ 472 (757)
+....++||+|.||.||+|.+.- ..||||..+.. ......+|++|.++|++++|||||+|||++... .+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 34445799999999999998742 13899988853 345667899999999999999999999998544 48
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
||||+|.||+|.++|.+.+. .++..++.+++.++|.||+|||+.+ +|||||-..|+|++.++.+||+||||++.-
T Consensus 238 ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCC
Confidence 99999999999999987664 4899999999999999999999988 999999999999999999999999998754
Q ss_pred CCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHH-hhhh
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEI-LDAQ 630 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~-ld~~ 630 (757)
.... .. .....-...|+|||.+..+.|+.++|||||||++||+++ |..||......+ ....+ ....
T Consensus 313 ~~~~---~~---~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~------v~~kI~~~~~ 380 (474)
T KOG0194|consen 313 SQYV---MK---KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE------VKAKIVKNGY 380 (474)
T ss_pred ccee---ec---cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH------HHHHHHhcCc
Confidence 3111 00 011134678999999999999999999999999999998 888986443321 11222 2233
Q ss_pred cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHh
Q 004388 631 AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEV 674 (757)
Q Consensus 631 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~~ 674 (757)
....|...+..+..++.+||..+|.+||+|. .+...|+.+...
T Consensus 381 r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~-~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 381 RMPIPSKTPKELAKVMKQCWKKDPEDRPTMS-TIKKKLEALEKK 423 (474)
T ss_pred cCCCCCCCHHHHHHHHHHhccCChhhccCHH-HHHHHHHHHHhc
Confidence 3445667788999999999999999999998 577777777654
No 113
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.1e-36 Score=321.38 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=202.1
Q ss_pred hhcCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG 471 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~ 471 (757)
..++|.....||+|+||.||++...+ ..+|+|.+.... ......+.+|++++.++ +||||++++++|.+..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 34567888899999999999998642 478999887543 23345688999999999 7999999999986654
Q ss_pred --eEEEEecCCCCHHHHHhhc-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec
Q 004388 472 --CLVYEYMENGSLEDRLYRK-------------NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD 536 (757)
Q Consensus 472 --~LV~Ey~~~gsL~~~L~~~-------------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld 536 (757)
++||||+++|+|.+++... .....+++..++.++.|++.||.|||+.+ |+||||||+|||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEc
Confidence 8999999999999998643 22346899999999999999999999987 99999999999999
Q ss_pred CCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhh
Q 004388 537 HNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVE 615 (757)
Q Consensus 537 ~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~ 615 (757)
.++.+||+|||+++.+....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 241 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYR----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE- 241 (293)
T ss_pred CCCeEEeCcccccccccccccee----ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-
Confidence 99999999999998765432111 1122345678999999888889999999999999999997 99998533211
Q ss_pred hhhchhhHHHHhh-hhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 616 TAIDEDNLAEILD-AQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 616 ~~~~~~~l~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.+...+. ......+...+..+.+|+.+||..+|.+||++. +++..|+.+
T Consensus 242 ------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-eil~~l~~~ 291 (293)
T cd05053 242 ------ELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFK-QLVEDLDRM 291 (293)
T ss_pred ------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHH-HHHHHHHHh
Confidence 1112222 112334556678899999999999999999998 466666554
No 114
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.4e-36 Score=313.86 Aligned_cols=243 Identities=24% Similarity=0.383 Sum_probs=196.3
Q ss_pred CCccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC---CceEEEEecCC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD---HGCLVYEYMEN 480 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~---~~~LV~Ey~~~ 480 (757)
+|.....||+|+||.||+|...+..+|+|.+.... ..+.|.+|+.++++++|||++++++++.. ..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 57778899999999999999999999999986543 34578999999999999999999997632 34899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++..... ..+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---- 156 (256)
T cd05082 85 GSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---- 156 (256)
T ss_pred CcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC----
Confidence 999998865432 35889999999999999999999987 9999999999999999999999999987644321
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhh-hhcCCCChhH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILD-AQAGDWPIKE 638 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~~p~~~ 638 (757)
....++..|+|||++.+..++.++|||||||++|+|++ |+.||....... +...+. ......+...
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~ 224 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKMDAPDGC 224 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhcCCCCCCCCCC
Confidence 12345678999999988889999999999999999998 999985322111 111111 1112334456
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+..+.+++.+||..+|.+||++.+ ++..|+
T Consensus 225 ~~~~~~li~~~l~~~p~~Rpt~~~-l~~~l~ 254 (256)
T cd05082 225 PPVVYDVMKQCWHLDAATRPSFLQ-LREQLE 254 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHH-HHHHHh
Confidence 788999999999999999999984 555554
No 115
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.8e-36 Score=329.11 Aligned_cols=238 Identities=27% Similarity=0.341 Sum_probs=186.7
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHH-HHHhcCCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELE-VLSKIRHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~-il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|.+. +..||+|++..... .....+..|.. +++.++||||+++++++.+.. ++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 5999999999999885 45899999865321 12233444544 567889999999999886544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .++......++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~---- 151 (325)
T cd05602 82 ELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG---- 151 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC----
Confidence 9999886543 3777888889999999999999988 99999999999999999999999999975432211
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|++|++||......+ .+..+.. .....+...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~-~~~~~~~~~~~~ 222 (325)
T cd05602 152 --TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE------MYDNILN-KPLQLKPNITNS 222 (325)
T ss_pred --CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH------HHHHHHh-CCcCCCCCCCHH
Confidence 1234579999999999998899999999999999999999999996432211 1112221 122233456788
Q ss_pred HHHHHHHHhhccCCCCCccchhhhh
Q 004388 642 LAALGLSCAELRRKDRPDLKNQVLP 666 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~vl~ 666 (757)
+.+++.+|++.+|.+||+..+.+..
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHHH
Confidence 9999999999999999998864433
No 116
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.8e-36 Score=314.87 Aligned_cols=255 Identities=25% Similarity=0.448 Sum_probs=200.3
Q ss_pred hcCCccceeeccCCcEEEEEEEECC-----eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH-----TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~-----~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
.++|+..+.||+|+||.||+|.... ..+|+|.+.... ......|.+|+.++.+++|||++++++++.+.. ++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 3467888899999999999998742 268999886543 334567899999999999999999999986544 89
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
||||+++++|.+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999886533 35899999999999999999999987 9999999999999999999999999998665
Q ss_pred CCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcC
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAG 632 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~ 632 (757)
..... .........++.|+|||++.++.++.++|||||||++|+|+| |+.||...... .....+......
T Consensus 159 ~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~~~~~i~~~~~~ 229 (268)
T cd05063 159 DDPEG---TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------EVMKAINDGFRL 229 (268)
T ss_pred ccccc---ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhcCCCC
Confidence 33211 111122234567999999988889999999999999999998 99999533211 111112111122
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..+...+..+.+++.+||..+|.+||++. .|+..|+++
T Consensus 230 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~-~i~~~l~~~ 267 (268)
T cd05063 230 PAPMDCPSAVYQLMLQCWQQDRARRPRFV-DIVNLLDKL 267 (268)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHhh
Confidence 33445678899999999999999999998 466666543
No 117
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.3e-37 Score=319.01 Aligned_cols=238 Identities=22% Similarity=0.351 Sum_probs=197.9
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
.|.+...||+|.||.|-++..+ ++.||||.++.+... +.-.+.+||+||+.|+||||+.+|.+|.... .||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 4666778999999999999864 679999998876443 3445789999999999999999999997554 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|..+|.|+|++...+. |+..+...++.||.+|+.|+|.+. ++|||||.+|||||.|+.+||+||||+.++....
T Consensus 134 YaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 134 YASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred ecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 9999999999987664 899999999999999999999988 9999999999999999999999999998876543
Q ss_pred CCccccccccCCcccccCCCccccccCCC-CCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLI-SPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
+ -+.+||+|.|.+||+.++..| ++.+|-|||||+||-|+.|.-||+..+. ..+..-+....- ..
T Consensus 208 -f------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-------k~lvrQIs~GaY-rE 272 (668)
T KOG0611|consen 208 -F------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-------KRLVRQISRGAY-RE 272 (668)
T ss_pred -H------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-------HHHHHHhhcccc-cC
Confidence 2 245799999999999998877 5889999999999999999999975432 222222222111 12
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+..+....-||.+||-.+|..|.++.+
T Consensus 273 P~~PSdA~gLIRwmLmVNP~RRATieD 299 (668)
T KOG0611|consen 273 PETPSDASGLIRWMLMVNPERRATIED 299 (668)
T ss_pred CCCCchHHHHHHHHHhcCcccchhHHH
Confidence 234567788999999999999999875
No 118
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5e-36 Score=317.72 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=199.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--Ce----EEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HT----FAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~----~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV 474 (757)
.+|....+||.|+||.||+|.+. +. .||+|++..... .....+.+|+.++..+.||||++++++|... .+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~ 86 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV 86 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence 46777889999999999999863 22 489999875433 3456788999999999999999999998654 4899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 87 TQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 99999999999886533 35899999999999999999999988 99999999999999999999999999987754
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AG 632 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~ 632 (757)
.... .......+++.|++||+..+..++.++|||||||++|||+| |.+||..... ..+...+... ..
T Consensus 162 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~ 230 (279)
T cd05109 162 DETE----YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-------REIPDLLEKGERL 230 (279)
T ss_pred ccce----eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHCCCcC
Confidence 3221 11123345788999999988889999999999999999998 9999853221 1122222221 11
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..+...+..+.+++.+||..+|..||++.+ ++..|+.+
T Consensus 231 ~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~-l~~~l~~~ 268 (279)
T cd05109 231 PQPPICTIDVYMIMVKCWMIDSECRPRFRE-LVDEFSRM 268 (279)
T ss_pred CCCccCCHHHHHHHHHHcCCChhhCcCHHH-HHHHHHHh
Confidence 223456778999999999999999999985 55665544
No 119
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.3e-36 Score=333.51 Aligned_cols=248 Identities=22% Similarity=0.285 Sum_probs=189.2
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|...+.||+|+||.||++... +..||||++.... ......+.+|+.++.+++||||+++++.+.+.. ||||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888899999999999999875 5689999987532 223356788999999999999999999987654 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||++||+|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999987643 4889999999999999999999988 999999999999999999999999999765421
Q ss_pred CCCc-----------------------------cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCC
Q 004388 556 PSFV-----------------------------STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKP 606 (757)
Q Consensus 556 ~~~~-----------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~ 606 (757)
.... .........+||+.|+|||++.+..++.++|||||||++|||++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1000 00000124589999999999988899999999999999999999999
Q ss_pred CccccchhhhhhchhhHHHHhhhh-cCCCC--hhHHHHHHHHHHHHhh--ccCCCCCccch
Q 004388 607 AIAITHKVETAIDEDNLAEILDAQ-AGDWP--IKETKELAALGLSCAE--LRRKDRPDLKN 662 (757)
Q Consensus 607 Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p--~~~~~~l~~Li~~Cl~--~~p~~RPs~~~ 662 (757)
||......+ .+..++... ....| ...+..+.+++.+++. .++..||++.+
T Consensus 235 Pf~~~~~~~------~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~e 289 (363)
T cd05628 235 PFCSETPQE------TYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEE 289 (363)
T ss_pred CCCCCCHHH------HHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHH
Confidence 996433221 111121100 01112 1245678888887543 23345677764
No 120
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-37 Score=317.24 Aligned_cols=254 Identities=23% Similarity=0.304 Sum_probs=200.4
Q ss_pred HhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEc--cCCchhhHHHHHHHHHHHhcCCCceeeecccccC------
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQ--SKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD------ 469 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~--~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------ 469 (757)
.....|.....||.|+||.|..+.+. +..||||.+. .......++..+|+.+|+.++|+||+.+++.+..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34445666778999999999999885 5699999987 4555666788999999999999999999998743
Q ss_pred -CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 470 -HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 470 -~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
..|+|+|+| +.+|...+.... .++......++.||+.||.|+|+.+ |+||||||+|+|++.+..+||||||+
T Consensus 99 ~DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccc
Confidence 228999999 478888876543 3888888999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCcccc-ccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh----------
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQ-RTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA---------- 617 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~---------- 617 (757)
|+..... .....+|..+.|.+|.|||++ ....|+...||||.||||.|||+|++-|...+.+.+.
T Consensus 172 AR~~~~~----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP 247 (359)
T KOG0660|consen 172 ARYLDKF----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP 247 (359)
T ss_pred eeecccc----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence 9988654 223345778999999999965 4567999999999999999999999999755444331
Q ss_pred -------hchhhHHHHhhhhc--CCCC-----hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 618 -------IDEDNLAEILDAQA--GDWP-----IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 618 -------~~~~~l~~~ld~~~--~~~p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+........+.... ...| +...+...+|+.+||..||.+|+|..+.+
T Consensus 248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 11111222222111 1111 14567889999999999999999988633
No 121
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.6e-36 Score=319.35 Aligned_cols=251 Identities=24% Similarity=0.419 Sum_probs=198.2
Q ss_pred CCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
+|....+||+|+||.||++... +..+|+|.+..........|.+|+++++.++||||+++++++.+.. ++|
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 4566778999999999999642 3478999887666566678999999999999999999999986544 899
Q ss_pred EEecCCCCHHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceE
Q 004388 475 YEYMENGSLEDRLYRKNN------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSK 542 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~K 542 (757)
|||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||+++++.+|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCEE
Confidence 999999999999875431 134889999999999999999999988 99999999999999999999
Q ss_pred EeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchh
Q 004388 543 IGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDED 621 (757)
Q Consensus 543 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~ 621 (757)
|+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|+| |++||.......
T Consensus 163 L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------ 232 (280)
T cd05092 163 IGDFGMSRDIYSTDYY----RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------ 232 (280)
T ss_pred ECCCCceeEcCCCcee----ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH------
Confidence 9999999765432211 01122345788999999988889999999999999999998 999985332211
Q ss_pred hHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 622 NLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 622 ~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.+..+........+...+..+.+|+.+||..+|.+||++.+ |+..|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~-l~~~l 278 (280)
T cd05092 233 AIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKD-IHSRL 278 (280)
T ss_pred HHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHH-HHHHH
Confidence 11222222222233456788999999999999999999984 55544
No 122
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-36 Score=320.47 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=197.8
Q ss_pred CccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCC--ceEE
Q 004388 405 FSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLV 474 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV 474 (757)
|....+||.|+||.||+|.+. +..||+|++...... ....|.+|+.++..++||||+++++++.+. .+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 555678999999999999864 257999998755432 345688999999999999999999998654 4889
Q ss_pred EEecCCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCce
Q 004388 475 YEYMENGSLEDRLYRKN-------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVS 541 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~ 541 (757)
+||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCce
Confidence 99999999999985321 1234788899999999999999999988 9999999999999999999
Q ss_pred EEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhch
Q 004388 542 KIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDE 620 (757)
Q Consensus 542 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 620 (757)
||+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||+| |.+||..... .
T Consensus 164 kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~ 233 (283)
T cd05091 164 KISDLGLFREVYAADYY----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------Q 233 (283)
T ss_pred Eecccccccccccchhe----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------H
Confidence 99999998865432211 11123456789999999988889999999999999999998 8888853321 1
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+.+..+.+......+...+..+.+|+.+||+.+|.+||++.+ |+..|+
T Consensus 234 ~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~-i~~~l~ 281 (283)
T cd05091 234 DVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKD-IHSRLR 281 (283)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHH-HHHHhh
Confidence 122233333333445667888999999999999999999984 555543
No 123
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.2e-36 Score=314.38 Aligned_cols=251 Identities=27% Similarity=0.419 Sum_probs=198.9
Q ss_pred cCCccceeeccCCcEEEEEEEECC-eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMEN 480 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~ 480 (757)
.+|....+||+|+||.||+|.+.+ ..||+|++..... ....|.+|+.++++++||||+++++++.+. .++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCC
Confidence 458888999999999999998764 4799999875332 346789999999999999999999987544 4899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+......
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-- 158 (262)
T cd05071 85 GSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-- 158 (262)
T ss_pred CcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccc--
Confidence 99999987532 235789999999999999999999987 999999999999999999999999999876533211
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......++..|++||+..++.++.++|||||||++|+|+| |.+||...... ..+..+........+...+
T Consensus 159 ---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~ 229 (262)
T cd05071 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQVERGYRMPCPPECP 229 (262)
T ss_pred ---cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH------HHHHHHhcCCCCCCccccC
Confidence 1123456788999999988889999999999999999999 88888533211 1111111111112234567
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
..+.+++.+|++.+|.+||++. +++..|+.
T Consensus 230 ~~l~~li~~~l~~~p~~Rp~~~-~~~~~l~~ 259 (262)
T cd05071 230 ESLHDLMCQCWRKEPEERPTFE-YLQAFLED 259 (262)
T ss_pred HHHHHHHHHHccCCcccCCCHH-HHHHHHHH
Confidence 8899999999999999999998 46555543
No 124
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5.5e-36 Score=317.22 Aligned_cols=253 Identities=22% Similarity=0.373 Sum_probs=198.7
Q ss_pred hhcCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-- 470 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-- 470 (757)
.+++|...+.||+|+||.||+|.+.. ..|++|.+..... .....|.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35678888999999999999998854 4788888765432 2345689999999999999999999987654
Q ss_pred ceEEEEecCCCCHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC---ceEE
Q 004388 471 GCLVYEYMENGSLEDRLYRKNN----TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL---VSKI 543 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~----~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~---~~KL 543 (757)
.++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 4899999999999999876432 235899999999999999999999988 99999999999998754 6899
Q ss_pred eeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhh
Q 004388 544 GDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDN 622 (757)
Q Consensus 544 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 622 (757)
+|||+++.+...... .......+++.|+|||++.++.++.++|||||||++|+|+| |..||..... ..
T Consensus 161 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~-------~~ 229 (277)
T cd05036 161 ADFGMARDIYRASYY----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-------QE 229 (277)
T ss_pred ccCccccccCCccce----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HH
Confidence 999999876432110 01122344678999999988899999999999999999997 9999864321 11
Q ss_pred HHHHhhh-hcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 623 LAEILDA-QAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 623 l~~~ld~-~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
+...+.. ....+|...+..+.+++.+|++.+|.+||++.+ |+..|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~-vl~~l 275 (277)
T cd05036 230 VMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFAT-ILERI 275 (277)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH-HHHHh
Confidence 2222221 223455667789999999999999999999985 54443
No 125
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.6e-36 Score=329.50 Aligned_cols=236 Identities=28% Similarity=0.318 Sum_probs=186.7
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHH-HHHhcCCCceeeecccccCC--ceEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELE-VLSKIRHPHLLLLLGACPDH--GCLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~-il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~g 481 (757)
.||+|+||.||+|... +..+|+|++.... ......+..|.. +++.++||||+++++++.+. .++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 5999999999999874 5689999986542 223344556655 46779999999999988654 48999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~---- 151 (325)
T cd05604 82 ELFFHLQRER---SFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD---- 151 (325)
T ss_pred CHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC----
Confidence 9998886533 4889999999999999999999988 99999999999999999999999999875332111
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKE 641 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~ 641 (757)
......||+.|+|||++.+..++.++|||||||++|+|++|++||......+ .+..++.. ....+...+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~~~~~~-~~~~~~~~~~~ 222 (325)
T cd05604 152 --TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MYDNILHK-PLVLRPGASLT 222 (325)
T ss_pred --CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HHHHHHcC-CccCCCCCCHH
Confidence 1234579999999999999999999999999999999999999996432211 11122221 11223346778
Q ss_pred HHHHHHHHhhccCCCCCccchhh
Q 004388 642 LAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+.+++.+|++.+|.+||++.+.+
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCCCH
Confidence 99999999999999999987533
No 126
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.4e-36 Score=322.00 Aligned_cols=285 Identities=23% Similarity=0.361 Sum_probs=210.3
Q ss_pred cCCccceeeccCCcEEEEEEEEC--Ce----EEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HT----FAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~----~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV 474 (757)
.+|...+.||.|+||.||+|.+. +. .+|+|.+..... .....+.+|+.+++.++||||++++|+|... .+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 35667788999999999999873 22 578888865433 2334688999999999999999999998653 4799
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
+||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred ehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999986543 24889999999999999999999987 99999999999999999999999999987653
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhc-C
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQA-G 632 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~-~ 632 (757)
.... .......++..|+|||++.+..++.++|||||||++|||+| |..||..... ..+.+++.... .
T Consensus 162 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~ 230 (303)
T cd05110 162 DEKE----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-------REIPDLLEKGERL 230 (303)
T ss_pred cccc----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHCCCCC
Confidence 3211 11223456789999999988889999999999999999997 8899853211 11122222111 1
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHhhhccccCCCCCCCCCCCCccCccchhcccC
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEVADRARDTVPSVHPAPPNHFICPILKEVMNE 704 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~~~~~~~~~~~~~~~~~p~~ficPi~~evM~d 704 (757)
..+...+..+.+++.+||..+|.+||++.+ ++..|..+...........+-.....|.....|.+++.|.+
T Consensus 231 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (303)
T cd05110 231 PQPPICTIDVYMVMVKCWMIDADSRPKFKE-LAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQNLLDE 301 (303)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHH-HHHHHHHHHhchhhheeeccCCcCCCCCCchhhHHhccccc
Confidence 122345678999999999999999999985 66677665433222111111122333444555666665554
No 127
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.9e-36 Score=311.31 Aligned_cols=246 Identities=26% Similarity=0.425 Sum_probs=200.9
Q ss_pred cCCccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMEN 480 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~ 480 (757)
.+|.....||.|+||.||+|...+..||+|.+..... ...++.+|+.++..++||||+++++++.+. .++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4677788999999999999999999999999976644 567789999999999999999999998643 4899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
++|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 85 GSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred CcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 999998865442 35899999999999999999999988 9999999999999999999999999998764221
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhh-hhcCCCChhH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILD-AQAGDWPIKE 638 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~~p~~~ 638 (757)
....++..|+|||++.++.++.++||||||+++|+|++ |..||...... .+...+. ......+...
T Consensus 157 -----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~ 224 (256)
T cd05039 157 -----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-------DVVPHVEKGYRMEAPEGC 224 (256)
T ss_pred -----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHhcCCCCCCccCC
Confidence 12245678999999988889999999999999999997 99998533211 1111111 1112234455
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
+..+.+++.+||..+|.+||++. +++..|+.
T Consensus 225 ~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~~ 255 (256)
T cd05039 225 PPEVYKVMKDCWELDPAKRPTFK-QLREQLAL 255 (256)
T ss_pred CHHHHHHHHHHhccChhhCcCHH-HHHHHHhc
Confidence 78899999999999999999997 46666543
No 128
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.3e-36 Score=318.61 Aligned_cols=250 Identities=23% Similarity=0.307 Sum_probs=196.7
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
|+..+.||.|+||.||+|.+. +..+|+|.+..... .....+.+|+++|++++|+|++.+++++.+.. |+||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999885 56899999865422 22345788999999999999999998876543 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++|+|.+++...+ ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 99999998886543 235999999999999999999999987 99999999999999999999999999976543211
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
.....|++.|+|||++.+..++.++|+|||||++|+|+||..||........ ...+...+......++..
T Consensus 158 -------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 227 (285)
T cd05632 158 -------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK---REEVDRRVLETEEVYSAK 227 (285)
T ss_pred -------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhhhccccccCcc
Confidence 1234789999999999888899999999999999999999999964322111 011111111112233445
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.+..+.+|+.+|+..+|.+||+..+..+..|
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l 258 (285)
T cd05632 228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEV 258 (285)
T ss_pred CCHHHHHHHHHHccCCHhHcCCCcccChHHH
Confidence 6678999999999999999999764433333
No 129
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=9.2e-36 Score=312.14 Aligned_cols=249 Identities=28% Similarity=0.436 Sum_probs=198.3
Q ss_pred CCccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCCC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMENG 481 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~g 481 (757)
+|...++||+|+||.||+|... +..+|+|.+..... ....|.+|+.++++++|||++++++++.+. .++||||++++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~ 85 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKG 85 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCC
Confidence 5677789999999999999875 45789998876433 346799999999999999999999988554 48999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.++|+|||++..+......
T Consensus 86 ~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~--- 158 (260)
T cd05070 86 SLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT--- 158 (260)
T ss_pred cHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc---
Confidence 9999886533 235899999999999999999999988 999999999999999999999999999876532211
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETK 640 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~ 640 (757)
......++..|+|||++.+..++.++||||||+++|+|++ |.+||......+ .+..+........+...+.
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 230 (260)
T cd05070 159 --ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE------VLEQVERGYRMPCPQDCPI 230 (260)
T ss_pred --cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCCCCCCCCcCCH
Confidence 1122345678999999988889999999999999999999 899996432111 1111211112234455678
Q ss_pred HHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 641 ELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 641 ~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
.+.+|+.+|+..+|.+||++. .+...|+
T Consensus 231 ~~~~li~~~l~~~p~~Rpt~~-~l~~~l~ 258 (260)
T cd05070 231 SLHELMLQCWKKDPEERPTFE-YLQSFLE 258 (260)
T ss_pred HHHHHHHHHcccCcccCcCHH-HHHHHHh
Confidence 899999999999999999998 4555553
No 130
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.1e-36 Score=320.47 Aligned_cols=253 Identities=26% Similarity=0.400 Sum_probs=196.5
Q ss_pred cCCccceeeccCCcEEEEEEEECCe----EEEEEEEccC-CchhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHHT----FAAVKVLQSK-GNIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~~----~vAvK~l~~~-~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV 474 (757)
++|.....||.|+||.||+|..... .+++|.+... .....+.|.+|+.++.++ +||||+++++++.+.. ++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 4678888999999999999987532 4688877643 233456789999999999 7999999999986654 899
Q ss_pred EEecCCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCce
Q 004388 475 YEYMENGSLEDRLYRKN-------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVS 541 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~ 541 (757)
|||+++|+|.+++.... ....+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999986532 1135889999999999999999999987 9999999999999999999
Q ss_pred EEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhch
Q 004388 542 KIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDE 620 (757)
Q Consensus 542 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 620 (757)
||+|||++....... .......+..|+|||++.+..++.++|||||||++|+|+| |..||.......
T Consensus 159 kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~----- 226 (297)
T cd05089 159 KIADFGLSRGEEVYV-------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE----- 226 (297)
T ss_pred EECCcCCCcccccee-------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----
Confidence 999999986432110 0111233567999999988889999999999999999997 999995332211
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
.+..+........|...+..+.+|+.+||..+|.+||++.+ ++..|+.+.
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~-i~~~l~~~~ 276 (297)
T cd05089 227 -LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQ-ISVQLSRML 276 (297)
T ss_pred -HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH-HHHHHHHHH
Confidence 11112111122334456788999999999999999999984 555565554
No 131
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.9e-36 Score=316.78 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=199.4
Q ss_pred cCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--e
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--C 472 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~ 472 (757)
++|.....||.|+||.||+|...+ ..||+|.+.... ......|.+|+.+|..++||||+++++++.+.. +
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 467788899999999999998753 579999986543 234457889999999999999999999986544 8
Q ss_pred EEEEecCCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEee
Q 004388 473 LVYEYMENGSLEDRLYRKNN-------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGD 545 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~D 545 (757)
+||||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECC
Confidence 99999999999999875332 234788999999999999999999987 99999999999999999999999
Q ss_pred ecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHH
Q 004388 546 VGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLA 624 (757)
Q Consensus 546 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~ 624 (757)
||+++.+....... ......+|..|+|||++.++.++.++|||||||++|||+| |.+||....... .+.
T Consensus 163 fg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~ 232 (277)
T cd05032 163 FGMTRDIYETDYYR----KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE------VLK 232 (277)
T ss_pred cccchhhccCcccc----cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH------HHH
Confidence 99998665432110 1123456889999999988889999999999999999998 999985322111 111
Q ss_pred HHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 625 EILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 625 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.+.+......|...+..+.+++.+||..+|.+||++.+ ++..|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~-l~~~l 275 (277)
T cd05032 233 FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLE-IVSSL 275 (277)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHH-HHHHh
Confidence 12222223345556789999999999999999999984 54444
No 132
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.6e-37 Score=338.04 Aligned_cols=246 Identities=23% Similarity=0.282 Sum_probs=190.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|...++||+|+||.||++... +..||||++.... ......+.+|+.+|.+++||||+++++.+.+.. |+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888899999999999999875 5689999986432 223456789999999999999999999986654 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++...+ .++......++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999986543 4788888899999999999999988 9999999999999999999999999985432100
Q ss_pred CC-------------------------------------ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHH
Q 004388 557 SF-------------------------------------VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVIL 599 (757)
Q Consensus 557 ~~-------------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ 599 (757)
.. ..........+||+.|+|||++.+..++.++|||||||+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00 00001112457999999999999888999999999999999
Q ss_pred HHHhCCCCccccchhhhhhchhhHHHHhhhh---cCCCChhHHHHHHHHHHHHhhccCCCCC---ccch
Q 004388 600 QLLTAKPAIAITHKVETAIDEDNLAEILDAQ---AGDWPIKETKELAALGLSCAELRRKDRP---DLKN 662 (757)
Q Consensus 600 elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~---~~~~p~~~~~~l~~Li~~Cl~~~p~~RP---s~~~ 662 (757)
+|+||+.||......+.. ..+.... ........+..+.+++.+|+ .+|.+|+ ++.+
T Consensus 236 ell~G~~Pf~~~~~~~~~------~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 236 EMLVGQPPFLADTPAETQ------LKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred ehhhCCCCCCCCCHHHHH------HHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 999999999754322211 1111100 01112245678889998876 4999999 5553
No 133
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.8e-36 Score=312.19 Aligned_cols=246 Identities=24% Similarity=0.405 Sum_probs=195.3
Q ss_pred CCccceeeccCCcEEEEEEEECC-eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
+|...+.||+|+||.||+|.+.. ..+|+|++.... .....|.+|++++++++||||+++++++.+.. ++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 46677889999999999998864 479999886432 23457889999999999999999999986544 899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
++|.+++..... .+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 84 ~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 84 GCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc--
Confidence 999999875432 5899999999999999999999988 999999999999999999999999999865432111
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......++..|+|||++.+..++.++||||||+++|+|+| |+.||......+ ....+........|...+
T Consensus 157 ---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~ 227 (256)
T cd05059 157 ---SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE------VVESVSAGYRLYRPKLAP 227 (256)
T ss_pred ---ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH------HHHHHHcCCcCCCCCCCC
Confidence 1122234568999999988889999999999999999999 899986432211 111111111223445567
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
..+.+++.+||..+|.+||++.+ ++..
T Consensus 228 ~~~~~li~~cl~~~p~~Rpt~~~-~l~~ 254 (256)
T cd05059 228 TEVYTIMYSCWHEKPEDRPAFKK-LLSQ 254 (256)
T ss_pred HHHHHHHHHHhcCChhhCcCHHH-HHHH
Confidence 89999999999999999999984 4443
No 134
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.8e-36 Score=311.00 Aligned_cols=242 Identities=25% Similarity=0.370 Sum_probs=191.1
Q ss_pred eeccCCcEEEEEEEE--CCeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCHH
Q 004388 410 RIGMGGYGTVYKGTF--HHTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSLE 484 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL~ 484 (757)
+||+|+||.||+|.+ .++.+|+|...... ......|.+|++++++++||||++++++|.+.. ++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 589999999999987 46789999876443 234567899999999999999999999986544 8999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccccc
Q 004388 485 DRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYK 564 (757)
Q Consensus 485 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~ 564 (757)
+++...+ ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......... . .
T Consensus 82 ~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~---~ 152 (252)
T cd05084 82 TFLRTEG--PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-S---T 152 (252)
T ss_pred HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccccc-c---c
Confidence 9886543 35889999999999999999999988 999999999999999999999999998765432110 0 0
Q ss_pred ccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhHHHHH
Q 004388 565 NTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKETKEL 642 (757)
Q Consensus 565 ~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~~~~l 642 (757)
.....++..|+|||++.++.++.++|||||||++|+|++ |.+||..... ......+... ....+...+..+
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 225 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-------QQTREAIEQGVRLPCPELCPDAV 225 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-------HHHHHHHHcCCCCCCcccCCHHH
Confidence 111233567999999998889999999999999999998 8888853321 1111222211 223444567889
Q ss_pred HHHHHHHhhccCCCCCccchhhhhHH
Q 004388 643 AALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 643 ~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.+|+.+|+..+|.+||++.+ ++..|
T Consensus 226 ~~li~~~l~~~p~~Rps~~~-~~~~l 250 (252)
T cd05084 226 YRLMERCWEYDPGQRPSFST-VHQEL 250 (252)
T ss_pred HHHHHHHcCCChhhCcCHHH-HHHHH
Confidence 99999999999999999984 55544
No 135
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=355.37 Aligned_cols=254 Identities=27% Similarity=0.498 Sum_probs=207.0
Q ss_pred CCccceeeccCCcEEEEEEEECCe-------EEEEEEEccC-CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHT-------FAAVKVLQSK-GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~-------~vAvK~l~~~-~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
+......||+|.||.||.|.+.+. .||||.+... ......+|++|..+|+.++|||||+++|.|.+.. +|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 344567899999999999987432 4899988765 3456678999999999999999999999997754 89
Q ss_pred EEEecCCCCHHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 474 VYEYMENGSLEDRLYRKN----NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
++|||+||+|..+|.... ....++....+.|+.+||.|+.||++.+ +|||||-..|+||+....+||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchh
Confidence 999999999999997652 1345888999999999999999999988 999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCC-cccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHh
Q 004388 550 TMLNSDPSFVSTTYKNTGP-VGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEIL 627 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~l 627 (757)
+.+.... .|+.... .-...|||||.+..+.++.++|||||||+|||++| |..||...+..+ .+..++
T Consensus 850 rDiy~~~-----yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~------v~~~~~ 918 (1025)
T KOG1095|consen 850 RDIYDKD-----YYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE------VLLDVL 918 (1025)
T ss_pred Hhhhhch-----heeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH------HHHHHH
Confidence 9444322 1222222 33467999999999999999999999999999998 889997554332 223344
Q ss_pred hhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 628 DAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 628 d~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
.....+.|..++..+.+++..||+.+|++||++.. ++..+..+.
T Consensus 919 ~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~-i~~q~~~i~ 962 (1025)
T KOG1095|consen 919 EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRT-IVEQDPAIS 962 (1025)
T ss_pred hCCccCCCCCCChHHHHHHHHHccCChhhCccHHH-HHhhhhhhh
Confidence 44456778889999999999999999999999994 555554443
No 136
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.1e-36 Score=336.18 Aligned_cols=243 Identities=24% Similarity=0.313 Sum_probs=188.7
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
.|...++||+|+||.||+|... +..||+|++.... ......+.+|+.+|++++||||++++++|.+.. +||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999875 4689999987542 223456889999999999999999999997654 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++.+.+ .++......++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999886543 4788888999999999999999988 9999999999999999999999999986432100
Q ss_pred CC-----------------------------------------ccccccccCCcccccCCCccccccCCCCCcchhhhHH
Q 004388 557 SF-----------------------------------------VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYG 595 (757)
Q Consensus 557 ~~-----------------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlG 595 (757)
.. ..........+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 00 0000011235799999999999888999999999999
Q ss_pred HHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-cCCCC--hhHHHHHHHHHHHHhhccCCCCCc
Q 004388 596 MVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-AGDWP--IKETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 596 vil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p--~~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
|+||||+||++||......+. ...++... ....| ...+.++.+++.+|+ .+|.+|++
T Consensus 236 vil~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLET------QMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHH------HHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 999999999999975433221 11121110 01111 235678888888876 49999997
No 137
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.5e-36 Score=353.87 Aligned_cols=264 Identities=22% Similarity=0.246 Sum_probs=202.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
.+|...++||+|+||.||+|.+. +..||||++.... ......|.+|+.++++++||||+++++++.+.. ++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46888899999999999999885 5689999987542 223467899999999999999999999986654 8999
Q ss_pred EecCCCCHHHHHhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeec
Q 004388 476 EYMENGSLEDRLYRKN--------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVG 547 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~--------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFG 547 (757)
||++||+|.+++.... ....+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 1234567788999999999999999987 9999999999999999999999999
Q ss_pred CccccCCCCCC------------ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhh
Q 004388 548 LSTMLNSDPSF------------VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVE 615 (757)
Q Consensus 548 la~~~~~~~~~------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~ 615 (757)
+++........ ..........+||+.|+|||++.+..++.++|||||||++|||+||++||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 99876321110 000111123579999999999999999999999999999999999999996422111
Q ss_pred hhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHH
Q 004388 616 TAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKE 673 (757)
Q Consensus 616 ~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~ 673 (757)
... .. .+.++.........+..+.+++.+|+..+|.+||+..++++..|+....
T Consensus 239 i~~-~~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISY-RD---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhh-hh---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 100 00 0111110001124567899999999999999999888788777776643
No 138
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=343.01 Aligned_cols=258 Identities=23% Similarity=0.288 Sum_probs=203.2
Q ss_pred hcCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcC-CCceeeeccccc-----CC---
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIR-HPHLLLLLGACP-----DH--- 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~-----~~--- 470 (757)
..++++.+.|.+|||+.||++.+.+ ..||+|.+-.......+...+||++|++|. |||||.+++... +.
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 4456778889999999999999853 699999988777778888999999999997 999999999431 11
Q ss_pred -ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 471 -GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
.+|.||||.||+|-|++..+.... |+..++++|+.++|.|+.+||... .||||||||-+||||+.+|..||||||.|
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccc
Confidence 158899999999999998655444 999999999999999999999998 58999999999999999999999999999
Q ss_pred cccCCCCCCcc-c--cccccCCcccccCCCcccc---ccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhH
Q 004388 550 TMLNSDPSFVS-T--TYKNTGPVGTLCYIDPEYQ---RTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNL 623 (757)
Q Consensus 550 ~~~~~~~~~~~-~--~~~~~~~~gt~~Y~aPE~~---~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l 623 (757)
........... . ....-...-|+.|.+||.+ .+...+.|+|||+|||+||-|+....||+... -
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg----------~ 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG----------K 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc----------c
Confidence 75433221000 0 0000112568999999954 56679999999999999999999999996321 1
Q ss_pred HHHhhhhcCCCC-hhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 624 AEILDAQAGDWP-IKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 624 ~~~ld~~~~~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
..++...-.-.| ..++..|.+||..||+.+|..||++. +|+..+-+|.
T Consensus 264 laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~-Qv~~~~~~l~ 312 (738)
T KOG1989|consen 264 LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIY-QVLEEIFELA 312 (738)
T ss_pred eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHH-HHHHHHHHHh
Confidence 223332222222 47899999999999999999999988 4555555443
No 139
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.7e-36 Score=320.83 Aligned_cols=257 Identities=25% Similarity=0.415 Sum_probs=202.3
Q ss_pred cCCccceeeccCCcEEEEEEEECC---------eEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH---------TFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~---------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~ 471 (757)
.+|...+.||+|+||.||++...+ ..+|+|++.... ......+.+|+.++.++ +||||++++++|.+..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 468888999999999999997532 369999987643 33455688999999999 7999999999986554
Q ss_pred --eEEEEecCCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec
Q 004388 472 --CLVYEYMENGSLEDRLYRKNN-------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD 536 (757)
Q Consensus 472 --~LV~Ey~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld 536 (757)
++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ ++||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEc
Confidence 899999999999999976431 134889999999999999999999987 99999999999999
Q ss_pred CCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhh
Q 004388 537 HNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVE 615 (757)
Q Consensus 537 ~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~ 615 (757)
.++.+||+|||+++......... ......+++.|+|||++.+..++.++|||||||++|+|++ |.+||.....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-- 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYK----KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 248 (307)
T ss_pred CCCcEEECCCcccccccccchhh----ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--
Confidence 99999999999997654322110 1122245678999999988889999999999999999998 8888853321
Q ss_pred hhhchhhHHHHhhhh-cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHh
Q 004388 616 TAIDEDNLAEILDAQ-AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEV 674 (757)
Q Consensus 616 ~~~~~~~l~~~ld~~-~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~~ 674 (757)
..+...+... ....|...+..+.+|+.+||..+|.+||++. .|+..|+++...
T Consensus 249 -----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-evl~~l~~~~~~ 302 (307)
T cd05098 249 -----EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRILAL 302 (307)
T ss_pred -----HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHHHH
Confidence 1112222211 2234455678999999999999999999998 577777776544
No 140
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.3e-36 Score=319.43 Aligned_cols=256 Identities=25% Similarity=0.426 Sum_probs=195.1
Q ss_pred cCCccceeeccCCcEEEEEEEECC----------------eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecc
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH----------------TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLG 465 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~----------------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g 465 (757)
..|....+||+|+||.||++...+ ..||+|.+.... ......|.+|+++|.+++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467778899999999999987643 258999987653 234457899999999999999999999
Q ss_pred cccCC--ceEEEEecCCCCHHHHHhhcC---------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCee
Q 004388 466 ACPDH--GCLVYEYMENGSLEDRLYRKN---------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNIL 534 (757)
Q Consensus 466 ~~~~~--~~LV~Ey~~~gsL~~~L~~~~---------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NIL 534 (757)
++... .++||||+++++|.+++.... ....+++..++.++.+++.||.|||+.+ ++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 98654 389999999999999886432 1234788999999999999999999988 999999999999
Q ss_pred ecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh--CCCCccccc
Q 004388 535 LDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT--AKPAIAITH 612 (757)
Q Consensus 535 ld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt--G~~Pf~~~~ 612 (757)
++.++.+||+|||++..+...... .......+++.|+|||++.++.++.++|||||||++|+|+| |..||....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EcCCCcEEecccccccccccCcce----eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 999999999999999765432211 11123355788999999988889999999999999999998 567775432
Q ss_pred hhhhhhchhhHHHHhhh----hcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 613 KVETAIDEDNLAEILDA----QAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 613 ~~~~~~~~~~l~~~ld~----~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
.... +. ........ .....+...+..+.+|+.+||..+|.+||++. .|++.|+
T Consensus 238 ~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~-~i~~~l~ 294 (295)
T cd05097 238 DEQV-IE--NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFN-KIHHFLR 294 (295)
T ss_pred hHHH-HH--HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHh
Confidence 2111 00 00111111 01112334567899999999999999999998 4655553
No 141
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.3e-35 Score=312.85 Aligned_cols=253 Identities=23% Similarity=0.379 Sum_probs=200.9
Q ss_pred cCCccceeeccCCcEEEEEEEECC-----eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH-----TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~-----~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~ 475 (757)
.+|....+||.|+||.||+|.+.. ..|+||...... ....+.|.+|+.++++++||||++++++|.+. .++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 357778899999999999998743 368999887654 34556799999999999999999999988654 48999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 86 ELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccc
Confidence 9999999999986543 24899999999999999999999988 999999999999999999999999999876543
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
.. +..+...+++.|+|||++....++.++|||||||++|+|++ |.+||......+. +..+........
T Consensus 161 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~------~~~~~~~~~~~~ 229 (270)
T cd05056 161 SY-----YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV------IGRIENGERLPM 229 (270)
T ss_pred cc-----eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH------HHHHHcCCcCCC
Confidence 21 11223345678999999888889999999999999999996 9999964432211 111111111223
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
+...+..+.+++.+|+..+|.+||++. .++..|+.+.
T Consensus 230 ~~~~~~~~~~li~~~l~~~P~~Rpt~~-~~~~~l~~~~ 266 (270)
T cd05056 230 PPNCPPTLYSLMTKCWAYDPSKRPRFT-ELKAQLSDIL 266 (270)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHH
Confidence 445678899999999999999999998 4666666554
No 142
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8e-36 Score=320.76 Aligned_cols=252 Identities=27% Similarity=0.408 Sum_probs=194.8
Q ss_pred cCCccceeeccCCcEEEEEEEECC--e--EEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--T--FAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~--~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV 474 (757)
++|+....||+|+||.||+|.+.. . .+++|.+.... ......|.+|++++.++ +||||+++++++.+.. ++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 467788899999999999998743 3 45777665432 23446788999999999 8999999999986554 899
Q ss_pred EEecCCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCce
Q 004388 475 YEYMENGSLEDRLYRKNN-------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVS 541 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~ 541 (757)
|||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 999999999999875431 235889999999999999999999987 9999999999999999999
Q ss_pred EEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhch
Q 004388 542 KIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDE 620 (757)
Q Consensus 542 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~ 620 (757)
||+|||++....... ......+++.|+|||++.+..++.++|||||||++|+|+| |..||......+
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----- 231 (303)
T cd05088 164 KIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----- 231 (303)
T ss_pred EeCccccCcccchhh-------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-----
Confidence 999999986432110 1112234678999999988889999999999999999998 999985332211
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
....+........+...+..+.+|+.+||..+|.+||++.+ ++..|.++
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~-il~~l~~~ 280 (303)
T cd05088 232 -LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQ-ILVSLNRM 280 (303)
T ss_pred -HHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH-HHHHHHHH
Confidence 11111111112233445678999999999999999999985 55555554
No 143
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=9.7e-36 Score=313.44 Aligned_cols=253 Identities=27% Similarity=0.471 Sum_probs=198.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC-----CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-----HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-----~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
.+|...+.||.|+||.||+|.+. +..+|+|.+.... ......|.+|+.++.+++||||+++++++.+.. ++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 35777889999999999999863 2378999886543 233467899999999999999999999985443 899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|.+++.... ..+++..+..|+.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..+..
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999987543 35899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGD 633 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~ 633 (757)
..... .......++..|++||++.++.++.++|+|||||++|++++ |..||......+ ....+.+.....
T Consensus 159 ~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~ 229 (267)
T cd05066 159 DPEAA---YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD------VIKAIEEGYRLP 229 (267)
T ss_pred cccee---eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH------HHHHHhCCCcCC
Confidence 32211 11122344678999999998889999999999999999886 999985332111 111122221223
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
.+...+..+.+++.+|++.+|.+||++. .++..|+.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 265 (267)
T cd05066 230 APMDCPAALHQLMLDCWQKDRNERPKFE-QIVSILDK 265 (267)
T ss_pred CCCCCCHHHHHHHHHHcccCchhCCCHH-HHHHHHHh
Confidence 3445577899999999999999999998 46666654
No 144
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-35 Score=319.45 Aligned_cols=258 Identities=25% Similarity=0.410 Sum_probs=203.1
Q ss_pred hcCCccceeeccCCcEEEEEEEEC---------CeEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCC
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH---------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDH 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~---------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~ 470 (757)
..+|.....||+|+||.||+|... +..||+|++.... ......+.+|+.++..+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456778889999999999999742 2368999887543 33456788999999999 899999999998655
Q ss_pred c--eEEEEecCCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee
Q 004388 471 G--CLVYEYMENGSLEDRLYRKNN-------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL 535 (757)
Q Consensus 471 ~--~LV~Ey~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl 535 (757)
. ++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 4 899999999999999876421 235788999999999999999999988 9999999999999
Q ss_pred cCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchh
Q 004388 536 DHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKV 614 (757)
Q Consensus 536 d~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~ 614 (757)
+.++.+||+|||+++.+....... ......+++.|+|||++.+..++.++||||||+++|+|+| |..||......
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYK----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred cCCCcEEECCCccceecccccccc----cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 999999999999998765432111 1123456788999999988889999999999999999998 78887532211
Q ss_pred hhhhchhhHHHHhh-hhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHh
Q 004388 615 ETAIDEDNLAEILD-AQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEV 674 (757)
Q Consensus 615 ~~~~~~~~l~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~~ 674 (757)
.+...+. ......+...+..+.+|+.+||..+|.+||++. +++..|+++...
T Consensus 247 -------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~-e~l~~l~~~~~~ 299 (304)
T cd05101 247 -------ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFK-QLVEDLDRILTL 299 (304)
T ss_pred -------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHH-HHHHHHHHHHHh
Confidence 1111121 112223445678899999999999999999998 577777776654
No 145
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9e-36 Score=317.61 Aligned_cols=255 Identities=24% Similarity=0.416 Sum_probs=198.4
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc-
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG- 471 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~- 471 (757)
...+|....+||+|+||.||+|... +..||+|.+..... .....+.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567888999999999999999754 23799998764432 23446889999999999999999999886544
Q ss_pred -eEEEEecCCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEE
Q 004388 472 -CLVYEYMENGSLEDRLYRKNN-------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKI 543 (757)
Q Consensus 472 -~LV~Ey~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL 543 (757)
++||||+++|+|.+++..... .+.+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 899999999999999975321 244677788999999999999999987 999999999999999999999
Q ss_pred eeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhh
Q 004388 544 GDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDN 622 (757)
Q Consensus 544 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 622 (757)
+|||+++......... ......++..|+|||++.++.++.++|||||||++|||++ |.+||...... +.
T Consensus 161 ~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~------~~ 230 (288)
T cd05061 161 GDFGMTRDIYETDYYR----KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QV 230 (288)
T ss_pred CcCCcccccccccccc----ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH------HH
Confidence 9999998654322111 1122345778999999988889999999999999999998 78888533211 11
Q ss_pred HHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 623 LAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 623 l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+..+.+......+...+..+.+++.+|++.+|.+||++.+ ++..|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~-ll~~l~ 276 (288)
T cd05061 231 LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE-IVNLLK 276 (288)
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHH-HHHHHH
Confidence 1222222223334455688999999999999999999984 544444
No 146
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-35 Score=332.02 Aligned_cols=256 Identities=24% Similarity=0.435 Sum_probs=201.0
Q ss_pred hcCCccceeeccCCcEEEEEEEECC-------eEEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCceeeecccccCC--
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSKGN-IQNKQFLQELEVLSKIR-HPHLLLLLGACPDH-- 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~-- 470 (757)
..+|....+||+|+||.||+|++.+ ..||||++..... .....+.+|+.+|.++. |||||+++|+|...
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 3467777899999999999998643 4799999975432 23456889999999997 99999999999754
Q ss_pred ceEEEEecCCCCHHHHHhhcCC----------------------------------------------------------
Q 004388 471 GCLVYEYMENGSLEDRLYRKNN---------------------------------------------------------- 492 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~---------------------------------------------------------- 492 (757)
.++||||+++|+|.+++.....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 4899999999999999975321
Q ss_pred -------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee
Q 004388 493 -------------------------------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL 535 (757)
Q Consensus 493 -------------------------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl 535 (757)
...+++.....|+.||+.||.|||+.+ |+||||||+|||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEE
Confidence 124678888999999999999999977 9999999999999
Q ss_pred cCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchh
Q 004388 536 DHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKV 614 (757)
Q Consensus 536 d~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~ 614 (757)
+.++.+||+|||+++.+....... ......+++.|+|||++....++.++|||||||++|||++ |..||......
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYI----SKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eCCCEEEEEecCcceecccccccc----cCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 999999999999998654322111 1123457889999999988889999999999999999998 88898533211
Q ss_pred hhhhchhhHHHHhhhh-cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 615 ETAIDEDNLAEILDAQ-AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 615 ~~~~~~~~l~~~ld~~-~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
+ .+...+... ....|...+..+.+|+.+||..+|.+||++. .|+..|+.+
T Consensus 349 ~------~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~-ell~~L~~~ 399 (401)
T cd05107 349 E------QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFS-QLVHLVGDL 399 (401)
T ss_pred H------HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHHH
Confidence 1 111222211 1223445678999999999999999999998 577777655
No 147
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.4e-35 Score=312.11 Aligned_cols=253 Identities=24% Similarity=0.317 Sum_probs=199.0
Q ss_pred HHHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--e
Q 004388 397 EIESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--C 472 (757)
Q Consensus 397 ei~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~ 472 (757)
|++.+++++.....||+|+||.||+|.+. +..|++|.+..........+.+|+.++++++||||+++++++.... +
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34567788888889999999999999875 4579999887666556678999999999999999999999986544 7
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-CCceEEeeecCccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-NLVSKIGDVGLSTM 551 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-~~~~KL~DFGla~~ 551 (757)
+||||+++++|.+++.........++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||++..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 99999999999999875432211277888899999999999999987 999999999999976 67999999999976
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCC--CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL--ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
...... ......|++.|+|||++..+. ++.++||||||+++|+|++|++||.......... .......
T Consensus 159 ~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~----~~~~~~~ 228 (268)
T cd06624 159 LAGINP------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM----FKVGMFK 228 (268)
T ss_pred cccCCC------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH----hhhhhhc
Confidence 543221 112346899999999886543 7899999999999999999999996332111100 0001111
Q ss_pred hcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 630 QAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 630 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.....|......+.+++.+||..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 261 (268)
T cd06624 229 IHPEIPESLSAEAKNFILRCFEPDPDKRASAHD 261 (268)
T ss_pred cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHH
Confidence 123345556788999999999999999999985
No 148
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-35 Score=315.04 Aligned_cols=256 Identities=23% Similarity=0.338 Sum_probs=202.7
Q ss_pred hcCCccceeeccCCcEEEEEEEECC------eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccC---Cc
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH------TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPD---HG 471 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~---~~ 471 (757)
.++|.....||+|+||.||+|.+.. ..|++|.+.... ......+.+|+.++++++||||+++++++.+ ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4567888899999999999998754 588999876543 3345668899999999999999999998754 34
Q ss_pred eEEEEecCCCCHHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeee
Q 004388 472 CLVYEYMENGSLEDRLYRKNNT-----PPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDV 546 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~-----~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DF 546 (757)
+++++|+++|+|.+++...... ..+++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 8999999999999998764322 46899999999999999999999987 999999999999999999999999
Q ss_pred cCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHH
Q 004388 547 GLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 547 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
|+++.+...... .......++..|+|||++.+..++.++|||||||++|++++ |++||....... +..
T Consensus 162 g~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~ 230 (280)
T cd05043 162 ALSRDLFPMDYH----CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-------MAA 230 (280)
T ss_pred CCcccccCCceE----EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-------HHH
Confidence 999866433211 01122356778999999988889999999999999999999 999996432211 111
Q ss_pred Hh-hhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 626 IL-DAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 626 ~l-d~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
.+ +......+...+..+.+++.+||..+|.+||++. +++..|+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~~~~~l~~~~ 277 (280)
T cd05043 231 YLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFS-QLVQCLTDFH 277 (280)
T ss_pred HHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHHH
Confidence 11 1112223445567899999999999999999998 5777776654
No 149
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.3e-35 Score=309.21 Aligned_cols=244 Identities=31% Similarity=0.532 Sum_probs=199.2
Q ss_pred eeccCCcEEEEEEEEC-----CeEEEEEEEccCCchh-hHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFH-----HTFAAVKVLQSKGNIQ-NKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~-----~~~vAvK~l~~~~~~~-~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|... +..+++|++....... ...+.+|+.++..++|||++++++++.+.. ++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 6899999999999886 6689999988664433 677899999999999999999999987643 8999999999
Q ss_pred CHHHHHhhcCC------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 482 SLEDRLYRKNN------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 482 sL~~~L~~~~~------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEcccccccccccc
Confidence 99999876521 256899999999999999999999987 999999999999999999999999999877654
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
... .......+++.|+|||.+....++.++|||||||++|+|++ |..||...... .....+........
T Consensus 159 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~~ 228 (262)
T cd00192 159 DYY----RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE------EVLEYLRKGYRLPK 228 (262)
T ss_pred ccc----ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHcCCCCCC
Confidence 321 11234567899999999988889999999999999999999 69999654221 11222222223344
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
|...+..+.+++.+||..+|.+||++.+ ++..
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~-l~~~ 260 (262)
T cd00192 229 PEYCPDELYELMLSCWQLDPEDRPTFSE-LVER 260 (262)
T ss_pred CccCChHHHHHHHHHccCCcccCcCHHH-HHHh
Confidence 5566789999999999999999999984 4443
No 150
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-37 Score=340.30 Aligned_cols=256 Identities=27% Similarity=0.460 Sum_probs=215.1
Q ss_pred ccceeeccCCcEEEEEEEEC-----CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 406 SENLRIGMGGYGTVYKGTFH-----HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~-----~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
.+.+.||.|.||.||+|+++ ...||||.|+... ..++.+|+.|..||.++.||||++|.|+..... .||.||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 45678999999999999985 2389999998764 446778999999999999999999999986654 789999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|+||+|+.+|..+.+ .+.+.+..-+++.||.|+.||-..+ +|||||-..||||+.|..+|++||||++.+.++..
T Consensus 712 MENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 999999999977653 4888899999999999999999988 99999999999999999999999999998876552
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHH-hCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLL-TAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ell-tG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
. .|...+..=...|.|||.+...+++.+||||||||+|||.+ .|..||... .+.+-+..+-+......|+
T Consensus 787 ~---~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm------SNQdVIkaIe~gyRLPpPm 857 (996)
T KOG0196|consen 787 A---AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM------SNQDVIKAIEQGYRLPPPM 857 (996)
T ss_pred c---cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc------chHHHHHHHHhccCCCCCC
Confidence 2 22223333357899999999999999999999999999987 588888532 2334445555556677899
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHhhh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEVAD 676 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~~~~ 676 (757)
+++..|..|++.||+++...||.+. +|+..|++|.....
T Consensus 858 DCP~aL~qLMldCWqkdR~~RP~F~-qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 858 DCPAALYQLMLDCWQKDRNRRPKFA-QIVSTLDKLIRNPN 896 (996)
T ss_pred CCcHHHHHHHHHHHHHHhhcCCCHH-HHHHHHHHHhcCch
Confidence 9999999999999999999999998 68888888865433
No 151
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.1e-35 Score=316.95 Aligned_cols=242 Identities=24% Similarity=0.353 Sum_probs=193.2
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
|...+.||+|+||.||++... +..||||.+..... .....+.+|+.++.+++|||++.+++.+.+.. |+||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 666788999999999999886 45899998865422 22345778999999999999999999886544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 82 MNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred cCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 999999998865432 35889999999999999999999987 99999999999999999999999999876543221
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ........++.......+..
T Consensus 158 -------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~ 227 (285)
T cd05630 158 -------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK---IKREEVERLVKEVQEEYSEK 227 (285)
T ss_pred -------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc---chHHHHHhhhhhhhhhcCcc
Confidence 12347899999999999889999999999999999999999999643211 01111222222222223445
Q ss_pred HHHHHHHHHHHHhhccCCCCCcc
Q 004388 638 ETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
.+..+.+|+.+||+.+|.+||++
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCC
Confidence 66789999999999999999994
No 152
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.1e-35 Score=317.44 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=197.1
Q ss_pred cCCccceeeccCCcEEEEEEEECC------------------eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeee
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH------------------TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLL 463 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~------------------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l 463 (757)
..|.....||+|+||.||++.+.. ..||+|++..... .....|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 467788899999999999987643 3589999876543 345678999999999999999999
Q ss_pred cccccCC--ceEEEEecCCCCHHHHHhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCe
Q 004388 464 LGACPDH--GCLVYEYMENGSLEDRLYRKN--------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNI 533 (757)
Q Consensus 464 ~g~~~~~--~~LV~Ey~~~gsL~~~L~~~~--------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NI 533 (757)
+++|.+. .++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhce
Confidence 9998654 489999999999999987643 1235899999999999999999999987 99999999999
Q ss_pred eecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh--CCCCcccc
Q 004388 534 LLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT--AKPAIAIT 611 (757)
Q Consensus 534 Lld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt--G~~Pf~~~ 611 (757)
|++.++.++|+|||+++........ .......+++.|+|||++.++.++.++|||||||++|+|++ |..||...
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYY----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred eecCCCceEEccccceeecccCcce----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999765433211 11123456789999999988889999999999999999998 67787533
Q ss_pred chhhhhhchhhHHHHhhh-------hcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 612 HKVETAIDEDNLAEILDA-------QAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 612 ~~~~~~~~~~~l~~~ld~-------~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.... .+...... .....+...+.++.+++.+||+.+|.+||++.+ |+..|
T Consensus 238 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~e-l~~~L 294 (296)
T cd05051 238 TDQQ------VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFRE-IHLFL 294 (296)
T ss_pred ChHH------HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHH-HHHHh
Confidence 2111 11111110 011223345678999999999999999999984 55554
No 153
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2e-35 Score=309.88 Aligned_cols=250 Identities=27% Similarity=0.433 Sum_probs=198.5
Q ss_pred cCCccceeeccCCcEEEEEEEECCe-EEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc-eEEEEecCC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHHT-FAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG-CLVYEYMEN 480 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~~-~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-~LV~Ey~~~ 480 (757)
.+|....+||.|+||.||+|.+.++ .+|+|.+.... ...+.|.+|+.++++++|||++++++++.+.. ++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence 3577778999999999999988654 78999876543 23467899999999999999999999886544 899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.++|+|||++.........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-- 158 (260)
T cd05069 85 GSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-- 158 (260)
T ss_pred CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc--
Confidence 99999987543 235889999999999999999999987 999999999999999999999999999876432210
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......++..|+|||+..++.++.++|||||||++|+|+| |+.||....... .+..+........+...+
T Consensus 159 ---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~ 229 (260)
T cd05069 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE------VLEQVERGYRMPCPQGCP 229 (260)
T ss_pred ---ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCcccC
Confidence 1123356788999999988889999999999999999999 899986432211 111121111122344567
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
..+.+++.+||..+|.+||++. .|.+.|+
T Consensus 230 ~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~ 258 (260)
T cd05069 230 ESLHELMKLCWKKDPDERPTFE-YIQSFLE 258 (260)
T ss_pred HHHHHHHHHHccCCcccCcCHH-HHHHHHh
Confidence 8899999999999999999997 4666554
No 154
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.6e-35 Score=310.29 Aligned_cols=249 Identities=27% Similarity=0.438 Sum_probs=199.0
Q ss_pred cCCccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMEN 480 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~ 480 (757)
++|...++||.|+||.||+|... +..||+|.+..... ....|.+|+.++++++||||+++++++.+. .++||||+++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMEN 84 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCC
Confidence 46778889999999999999874 46899999875443 356789999999999999999999987543 4899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-- 158 (260)
T cd05067 85 GSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT-- 158 (260)
T ss_pred CCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc--
Confidence 99999886544 346899999999999999999999987 999999999999999999999999999776532210
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhh-hcCCCChhH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDA-QAGDWPIKE 638 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~-~~~~~p~~~ 638 (757)
......++..|+|||++.++.++.++||||||+++|+|+| |++||....... +...+.. .....+...
T Consensus 159 ---~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~ 228 (260)
T cd05067 159 ---AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-------VIQNLERGYRMPRPDNC 228 (260)
T ss_pred ---cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-------HHHHHHcCCCCCCCCCC
Confidence 1123356788999999988889999999999999999999 999996332111 1111111 111223345
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+..+.+++.+|+..+|.+||++. .+...|+
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~ 258 (260)
T cd05067 229 PEELYELMRLCWKEKPEERPTFE-YLRSVLE 258 (260)
T ss_pred CHHHHHHHHHHccCChhhCCCHH-HHHHHhh
Confidence 67899999999999999999998 4555554
No 155
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-35 Score=310.20 Aligned_cols=244 Identities=26% Similarity=0.369 Sum_probs=195.3
Q ss_pred eeccCCcEEEEEEEECC---e--EEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFHH---T--FAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~---~--~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~gs 482 (757)
.||.|+||.||+|.+.. + .||||.+..... ...+.|.+|+.++++++||||+++++.+.+. .++||||+++|+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGS 81 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCc
Confidence 58999999999998743 2 689999887655 5567899999999999999999999988763 379999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccc
Q 004388 483 LEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTT 562 (757)
Q Consensus 483 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~ 562 (757)
|.+++..... ..+++.....++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..+.........
T Consensus 82 L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~- 156 (257)
T cd05040 82 LLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM- 156 (257)
T ss_pred HHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccceec-
Confidence 9999876543 46899999999999999999999987 999999999999999999999999999877543321111
Q ss_pred ccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHh-hhhcCCCChhHHH
Q 004388 563 YKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEIL-DAQAGDWPIKETK 640 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~l-d~~~~~~p~~~~~ 640 (757)
.....++..|+|||++.+..++.++|||||||++|+|+| |+.||......+. +..+. .......+...+.
T Consensus 157 --~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 228 (257)
T cd05040 157 --EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI------LKKIDKEGERLERPEACPQ 228 (257)
T ss_pred --ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH------HHHHHhcCCcCCCCccCCH
Confidence 123467889999999988889999999999999999999 9999853322111 11111 1111223344568
Q ss_pred HHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 641 ELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 641 ~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
.+.+++.+||..+|.+||++.+ ++..
T Consensus 229 ~~~~li~~~l~~~p~~Rps~~~-~~~~ 254 (257)
T cd05040 229 DIYNVMLQCWAHNPADRPTFAA-LREF 254 (257)
T ss_pred HHHHHHHHHCCCCcccCCCHHH-HHHH
Confidence 8999999999999999999985 4443
No 156
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.4e-35 Score=311.64 Aligned_cols=254 Identities=22% Similarity=0.358 Sum_probs=200.4
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~ 475 (757)
.+|.....||.|+||.||+|+. .++.||||.+.... ......|.+|+.+++.++||||+++++++.+. .++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688889999999999999987 46799999875422 23345688999999999999999999988644 48999
Q ss_pred EecCCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 476 EYMENGSLEDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
||+++|+|.+++.... ....++...+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999886422 2345788899999999999999999987 99999999999999999999999999987653
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-cCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-AGD 633 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~ 633 (757)
... ......|++.|+|||++.+..++.++|+||||+++|+|+||+.||...... ...+...+... ...
T Consensus 159 ~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~ 227 (267)
T cd08228 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LFSLCQKIEQCDYPP 227 (267)
T ss_pred hhH------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-----HHHHHHHHhcCCCCC
Confidence 221 112346889999999998888999999999999999999999998532211 01111111111 111
Q ss_pred -CChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 634 -WPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 634 -~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.+...+..+.+++.+||..+|.+||++. +|+..++.+
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~-~vl~~~~~~ 265 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIG-YVHQIAKQM 265 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHH-HHHHHHHHh
Confidence 1224567899999999999999999998 577777665
No 157
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2e-36 Score=329.36 Aligned_cols=243 Identities=24% Similarity=0.291 Sum_probs=194.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|.....||+|+||.||++... +..||+|++..... .....+.+|+.++..++||||+++++++.+.. ++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999875 56899999875422 23456788999999999999999999886544 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999987642 35889999999999999999999988 999999999999999999999999999876543
Q ss_pred CCCccccccccCCcccccCCCccccc------cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQR------TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
... ......||+.|+|||++. ...++.++|||||||++|+|+||+.||....... .+..++..
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~ 224 (330)
T cd05601 156 KMV-----NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNF 224 (330)
T ss_pred Cce-----eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcC
Confidence 211 123357999999999876 4567899999999999999999999996443221 11222221
Q ss_pred h-cCCCC--hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 630 Q-AGDWP--IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 630 ~-~~~~p--~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. ...+| ...+..+.+|+.+|+. +|.+||++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~ 259 (330)
T cd05601 225 QRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEG 259 (330)
T ss_pred CCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHH
Confidence 1 11122 2457789999999998 9999999885
No 158
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.3e-35 Score=324.94 Aligned_cols=257 Identities=25% Similarity=0.378 Sum_probs=197.4
Q ss_pred cCCccceeeccCCcEEEEEEEE-------CCeEEEEEEEccCCc-hhhHHHHHHHHHHHhc-CCCceeeecccccCC---
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF-------HHTFAAVKVLQSKGN-IQNKQFLQELEVLSKI-RHPHLLLLLGACPDH--- 470 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~-------~~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~--- 470 (757)
.+|...+.||.|+||.||+|.+ .++.||||+++.... .....+.+|+.+|.++ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4688889999999999999974 245899999975432 2345688999999999 689999999988543
Q ss_pred ceEEEEecCCCCHHHHHhhcCC----------------------------------------------------------
Q 004388 471 GCLVYEYMENGSLEDRLYRKNN---------------------------------------------------------- 492 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~---------------------------------------------------------- 492 (757)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 3789999999999999865321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccccccc
Q 004388 493 ------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNT 566 (757)
Q Consensus 493 ------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~ 566 (757)
...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----~~~ 239 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----RKG 239 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchh----hcC
Confidence 124688888999999999999999987 9999999999999999999999999998654322111 112
Q ss_pred CCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHH
Q 004388 567 GPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAAL 645 (757)
Q Consensus 567 ~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~L 645 (757)
...+++.|+|||++.+..++.++|||||||++|+|++ |..||........ ....+........|...+..+.++
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 314 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEMYQT 314 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-----HHHHHhccCCCCCCCCCCHHHHHH
Confidence 2346778999999988889999999999999999997 9999854321111 111111111122233346789999
Q ss_pred HHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 646 GLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 646 i~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
+.+||+.+|.+||++. +|+..|+.+.
T Consensus 315 ~~~cl~~~p~~Rps~~-eil~~l~~~~ 340 (343)
T cd05103 315 MLDCWHGEPSQRPTFS-ELVEHLGNLL 340 (343)
T ss_pred HHHHccCChhhCcCHH-HHHHHHHHHH
Confidence 9999999999999998 4666666553
No 159
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-37 Score=318.72 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=196.5
Q ss_pred hhcCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeeccccc---CC--c--
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACP---DH--G-- 471 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~---~~--~-- 471 (757)
.+..|...+.+|.|+||.||+|.... ..||||..-.+.... .+|+++|+++.|||||+|+-+|. +. .
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 34567888899999999999998864 599999876654322 36999999999999999988873 12 2
Q ss_pred eEEEEecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecCc
Q 004388 472 CLVYEYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGLS 549 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGla 549 (757)
.||||||+ .+|...+... .....++...+.-+.+||++||.|||+.+ |+||||||.|||+|.+ |.+||||||.|
T Consensus 98 nlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcc
Confidence 58999998 4898888642 12334777788889999999999999987 9999999999999976 99999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchh-------
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDED------- 621 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~------- 621 (757)
+.+..+... .....|..|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|...+.+.+....-
T Consensus 174 K~L~~~epn-------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt 246 (364)
T KOG0658|consen 174 KVLVKGEPN-------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT 246 (364)
T ss_pred eeeccCCCc-------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC
Confidence 988765432 33478999999997665 569999999999999999999999998655444332110
Q ss_pred --hHHHHh-------hhhc--CC----CChhHHHHHHHHHHHHhhccCCCCCccchhhh-hHHHHHHHh
Q 004388 622 --NLAEIL-------DAQA--GD----WPIKETKELAALGLSCAELRRKDRPDLKNQVL-PVLERLKEV 674 (757)
Q Consensus 622 --~l~~~l-------d~~~--~~----~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl-~~L~~l~~~ 674 (757)
.+..+- .+.. .. +....++++.+|+.+++.++|.+|.+..+.+. +..+.+++.
T Consensus 247 ~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 247 REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 000000 0000 11 22346789999999999999999999876443 344555443
No 160
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.4e-35 Score=315.83 Aligned_cols=254 Identities=27% Similarity=0.440 Sum_probs=199.0
Q ss_pred hcCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--c
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--G 471 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~ 471 (757)
.++|.....||.|+||.||+|... +..+|+|++..... .....|.+|+.++++++||||++++++|.+. .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 456888899999999999999863 46899999875432 3346789999999999999999999998654 4
Q ss_pred eEEEEecCCCCHHHHHhhcC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCC
Q 004388 472 CLVYEYMENGSLEDRLYRKN-------------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGN 532 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~-------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~N 532 (757)
++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 89999999999999986431 1235788899999999999999999987 9999999999
Q ss_pred eeecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCcccc
Q 004388 533 ILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAIT 611 (757)
Q Consensus 533 ILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~ 611 (757)
||++.++.+||+|||++..+....... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYK----ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred eEecCCCceEECccccceecccCcccc----ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999987654322110 0122345678999999988889999999999999999998 88888532
Q ss_pred chhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 612 HKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 612 ~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
... ..+..+.+......+...+..+.+|+.+||..+|.+||++.+ ++..|+
T Consensus 237 ~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e-l~~~l~ 287 (288)
T cd05050 237 AHE------EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFAS-INRILQ 287 (288)
T ss_pred CHH------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH-HHHHhh
Confidence 211 111122222222234456788999999999999999999984 666654
No 161
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.9e-35 Score=313.62 Aligned_cols=241 Identities=29% Similarity=0.351 Sum_probs=189.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
+|.....||.|+||.||+|.+. +..||+|++.... ......|.+|+.++.+++||||++++++|... .++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 4667788999999999999874 5689999986542 23345688999999999999999999998654 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|..+. .+++.....++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 999996542 3678888999999999999999988 9999999999999999999999999997654321
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc-hhhHHHHhhhhcCCC-Ch
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID-EDNLAEILDAQAGDW-PI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~-~~~l~~~ld~~~~~~-p~ 636 (757)
.....||..|+|||++.+..++.++|||||||++|+|+||+.||........... ......+.+...... ..
T Consensus 150 ------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (279)
T cd06619 150 ------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG 223 (279)
T ss_pred ------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC
Confidence 1345789999999999888899999999999999999999999964221111111 111111111111111 12
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+..+.+++.+|++.+|.+||++.+
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~e 249 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPEN 249 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHH
Confidence 35678999999999999999999875
No 162
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.8e-35 Score=318.00 Aligned_cols=255 Identities=24% Similarity=0.408 Sum_probs=200.5
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG 471 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~ 471 (757)
..++|...+.||+|+||.||+|... ...+|||++.... ......|.+|+.+++++ +||||++++++|....
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3457888999999999999999752 2378999887543 23346789999999999 7999999999986544
Q ss_pred --eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 472 --CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 472 --~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
++||||+++|+|.+++..... ..+++.++..++.+++.||.|||+.+ |+|+||||+|||++.++.+||+|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccc
Confidence 899999999999999875432 34899999999999999999999987 999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
+.+....... ......+++.|+|||++..+.++.++|||||||++|+|+| |.+||...... ..+...+.
T Consensus 189 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~------~~~~~~~~ 258 (302)
T cd05055 189 RDIMNDSNYV----VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD------SKFYKLIK 258 (302)
T ss_pred ccccCCCcee----ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch------HHHHHHHH
Confidence 8665432111 1123356788999999988889999999999999999998 99998643211 11122222
Q ss_pred hh-cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 629 AQ-AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 629 ~~-~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
.. ....+...+..+.+++.+||..+|.+||++. +++..|++
T Consensus 259 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ell~~l~~ 300 (302)
T cd05055 259 EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFK-QIVQLIGK 300 (302)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHHh
Confidence 11 1122334567899999999999999999998 46666654
No 163
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.5e-35 Score=308.04 Aligned_cols=254 Identities=24% Similarity=0.404 Sum_probs=201.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|.....||.|+||.||+|... +..||+|.++... ......+.+|+.++++++|||++++++++.+.. ++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888899999999999999985 6789999876422 223567899999999999999999999986544 8999
Q ss_pred EecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 476 EYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
||+++|+|.+++... .....+++..+..++.+++.||.|||+.+ |+||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999988653 22345899999999999999999999988 99999999999999999999999999876543
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh-hcCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA-QAGD 633 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~-~~~~ 633 (757)
.... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ..+.+.+.. ....
T Consensus 159 ~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~ 227 (267)
T cd08224 159 KTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-----YSLCKKIEKCDYPP 227 (267)
T ss_pred CCcc------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccH-----HHHHhhhhcCCCCC
Confidence 2211 123468899999999988889999999999999999999999985332110 001111111 1112
Q ss_pred CCh-hHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 634 WPI-KETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 634 ~p~-~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.|. ..+..+.+++.+||..+|.+||++. .|+..|+.+
T Consensus 228 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~-~il~~~~~~ 265 (267)
T cd08224 228 LPADHYSEELRDLVSRCINPDPEKRPDIS-YVLQVAKEM 265 (267)
T ss_pred CChhhcCHHHHHHHHHHcCCCcccCCCHH-HHHHHHHHh
Confidence 222 4567899999999999999999998 466666654
No 164
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-35 Score=312.44 Aligned_cols=246 Identities=23% Similarity=0.330 Sum_probs=192.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
.+|....+||+|+||.||+|... +..||+|++..........+.+|+.++.+++||||+++++++.... ++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46888899999999999999874 5689999987655445566889999999999999999999986544 7999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|.+++...+ ++++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 89 ~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06646 89 GGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIA- 161 (267)
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence 9999999886433 4889999999999999999999987 99999999999999999999999999986643211
Q ss_pred ccccccccCCcccccCCCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQR---TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
......|++.|+|||.+. ...++.++|||||||++|+|+||++||............. ...+.......+
T Consensus 162 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~ 234 (267)
T cd06646 162 -----KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--KSNFQPPKLKDK 234 (267)
T ss_pred -----ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee--cCCCCCCCCccc
Confidence 123457899999999874 4457889999999999999999999985332211110000 000000000111
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+.+++.+||..+|.+||++.+
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~ 261 (267)
T cd06646 235 TKWSSTFHNFVKISLTKNPKKRPTAER 261 (267)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHH
Confidence 234578999999999999999999984
No 165
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6e-36 Score=311.94 Aligned_cols=246 Identities=23% Similarity=0.368 Sum_probs=193.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch--hhHHHHHHHHHHHhcCCCc-eeeecccccC--------C
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI--QNKQFLQELEVLSKIRHPH-LLLLLGACPD--------H 470 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~--~~~~f~~Ev~il~~l~Hpn-iv~l~g~~~~--------~ 470 (757)
.|....+||+|+||+||+|+.. +..||+|++...... ......+|+.+|+.|+|+| ||.|++++.. .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 4556667999999999999875 568999998866442 3445689999999999999 9999999854 2
Q ss_pred ceEEEEecCCCCHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNT-PPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~-~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
.+||+||+. .+|.+++...... ..++...+..++.||+.||+|||+++ |+||||||.||||+.+|.+||+|||+|
T Consensus 92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchH
Confidence 368999996 6899988765422 34666889999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
+...-... ..+..++|.+|.|||++.+. .|+...||||+|||++||+++++-|......+... .+..++.
T Consensus 168 ra~~ip~~------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~---~If~~lG 238 (323)
T KOG0594|consen 168 RAFSIPMR------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLF---RIFRLLG 238 (323)
T ss_pred HHhcCCcc------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHH---HHHHHcC
Confidence 96653221 13556899999999988766 79999999999999999999999997665543321 1111111
Q ss_pred hh-cCCCCh-------------------------hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 AQ-AGDWPI-------------------------KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 ~~-~~~~p~-------------------------~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.. ...||. .......+++.+|++++|++|.++..
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~ 298 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKG 298 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHH
Confidence 11 112221 11247889999999999999999874
No 166
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.7e-35 Score=322.46 Aligned_cols=244 Identities=25% Similarity=0.283 Sum_probs=187.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|...+.||+|+||.||++... +..||+|++.... ......|.+|+.++..++||||+.++++|.+.. |+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36788899999999999999885 5689999986421 223455889999999999999999999986554 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||++||+|.+++.+.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999986533 24888899999999999999999988 999999999999999999999999999765432
Q ss_pred CCCccccccccCCcccccCCCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRT-----GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ 630 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~ 630 (757)
... ......||+.|+|||++.. +.++.++|||||||++|+|++|+.||......+. +..++...
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~------~~~i~~~~ 224 (331)
T cd05597 156 GTV-----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHK 224 (331)
T ss_pred CCc-----cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH------HHHHHcCC
Confidence 211 1123469999999998863 4578899999999999999999999964332211 11111110
Q ss_pred ----cCCCChhHHHHHHHHHHHHhhccC--CCCCccch
Q 004388 631 ----AGDWPIKETKELAALGLSCAELRR--KDRPDLKN 662 (757)
Q Consensus 631 ----~~~~p~~~~~~l~~Li~~Cl~~~p--~~RPs~~~ 662 (757)
........+..+.+++.+|+..++ ..||++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~ 262 (331)
T cd05597 225 EHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQD 262 (331)
T ss_pred CcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 011112356788999999876533 33667654
No 167
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-35 Score=318.03 Aligned_cols=257 Identities=23% Similarity=0.411 Sum_probs=200.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC---------CeEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH---------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~---------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~ 471 (757)
.+|....+||+|+||.||+|... ...+|+|++.... ......+.+|+.++.++ +||||++++++|.+..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778889999999999999752 2368999887543 23455688999999999 6999999999986544
Q ss_pred --eEEEEecCCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec
Q 004388 472 --CLVYEYMENGSLEDRLYRKNN-------------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD 536 (757)
Q Consensus 472 --~LV~Ey~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld 536 (757)
++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 899999999999999865321 235889999999999999999999987 99999999999999
Q ss_pred CCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhh
Q 004388 537 HNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVE 615 (757)
Q Consensus 537 ~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~ 615 (757)
.++.+||+|||+++......... ......+++.|+|||++.++.++.++|||||||++|+|+| |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-- 242 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYK----KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-- 242 (314)
T ss_pred CCCcEEEcccccccccccccccc----ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--
Confidence 99999999999998665322111 0112234578999999988889999999999999999999 8888853321
Q ss_pred hhhchhhHHHHhhh-hcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHHh
Q 004388 616 TAIDEDNLAEILDA-QAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKEV 674 (757)
Q Consensus 616 ~~~~~~~l~~~ld~-~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~~ 674 (757)
..+...+.. .....+...+..+.+++.+||..+|.+||++. .++..|..+...
T Consensus 243 -----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~ll~~l~~~~~~ 296 (314)
T cd05099 243 -----EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFK-QLVEALDKVLAA 296 (314)
T ss_pred -----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHHHHHH
Confidence 111111111 11233445677899999999999999999998 577777776543
No 168
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.2e-35 Score=309.18 Aligned_cols=248 Identities=25% Similarity=0.417 Sum_probs=189.4
Q ss_pred eeccCCcEEEEEEEEC-----CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccC---CceEEEEecCC
Q 004388 410 RIGMGGYGTVYKGTFH-----HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPD---HGCLVYEYMEN 480 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~-----~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~---~~~LV~Ey~~~ 480 (757)
.||+|+||.||+|.+. ...+|+|.+.... ......|.+|+.+++.++||||++++++|.. ..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5899999999999863 2479999875432 3345678899999999999999999997742 24899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++..... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.......
T Consensus 82 ~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~- 155 (262)
T cd05058 82 GDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS- 155 (262)
T ss_pred CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee-
Confidence 999999865432 3677788899999999999999987 9999999999999999999999999997654322110
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhC-CCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTA-KPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
........+++.|+|||++.+..++.++|||||||++|||+|| .+||....... ....+........+...+
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 228 (262)
T cd05058 156 -VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD------ITVYLLQGRRLLQPEYCP 228 (262)
T ss_pred -ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHHhcCCCCCCCCcCC
Confidence 0111234567889999999888899999999999999999995 56664322111 111111111122233456
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..+.+++.+||..+|.+||++. .++..|+.+
T Consensus 229 ~~~~~li~~cl~~~p~~Rp~~~-~il~~l~~~ 259 (262)
T cd05058 229 DPLYEVMLSCWHPKPEMRPTFS-ELVSRIEQI 259 (262)
T ss_pred HHHHHHHHHHcCCChhhCCCHH-HHHHHHHHH
Confidence 7899999999999999999998 466666554
No 169
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.9e-36 Score=330.70 Aligned_cols=244 Identities=24% Similarity=0.319 Sum_probs=193.9
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
...+|....+||+|+||.||++... +..||+|++.... ......+.+|+.+++.++||||+++++++.+.. ++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3457888999999999999999885 5689999986431 223345788999999999999999999886654 89
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
||||++||+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999988543 3777888889999999999999988 9999999999999999999999999998664
Q ss_pred CCCCCccccccccCCcccccCCCccccccC----CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTG----LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
.... .......||+.|+|||++.+. .++.++|||||||+||||+||++||...... ..+..++..
T Consensus 194 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~ 262 (370)
T cd05596 194 ANGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMDH 262 (370)
T ss_pred CCCc-----ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH------HHHHHHHcC
Confidence 3221 112345799999999987543 4789999999999999999999999754322 122233322
Q ss_pred h-cCCCCh--hHHHHHHHHHHHHhhccCCC--CCccch
Q 004388 630 Q-AGDWPI--KETKELAALGLSCAELRRKD--RPDLKN 662 (757)
Q Consensus 630 ~-~~~~p~--~~~~~l~~Li~~Cl~~~p~~--RPs~~~ 662 (757)
. ...+|. ..+..+.+|+.+|+..+|.+ ||++.+
T Consensus 263 ~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~e 300 (370)
T cd05596 263 KNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDE 300 (370)
T ss_pred CCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHH
Confidence 1 122332 45789999999999988887 998875
No 170
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.9e-36 Score=339.18 Aligned_cols=246 Identities=20% Similarity=0.312 Sum_probs=185.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC--------C--
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD--------H-- 470 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--------~-- 470 (757)
.+|....+||+|+||.||+|... +..||||++.... ....+|+.+|+.++|||||++++++.. .
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 46888899999999999999874 5689999875432 234579999999999999999887521 1
Q ss_pred ceEEEEecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecC
Q 004388 471 GCLVYEYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGL 548 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGl 548 (757)
.++||||++ ++|.+++... .....+++..+..++.||+.||.|||+.+ |+||||||+||||+.+ +.+||+|||+
T Consensus 142 l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 142 LNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecccc
Confidence 258999997 4777766432 23346899999999999999999999988 9999999999999866 4799999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch-------
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE------- 620 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~------- 620 (757)
|+.+..... .....||+.|+|||++.+ ..++.++|||||||+||||+||++||......+.....
T Consensus 218 a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p 290 (440)
T PTZ00036 218 AKNLLAGQR-------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTP 290 (440)
T ss_pred chhccCCCC-------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 987653321 133578999999998765 46899999999999999999999999754322211100
Q ss_pred --hhHHHHhhhh--------c------CCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 621 --DNLAEILDAQ--------A------GDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 621 --~~l~~~ld~~--------~------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+.+.. +.+. . ..+|...+.++.+|+.+||..+|.+||++.+.+
T Consensus 291 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 291 TEDQLKE-MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CHHHHHH-hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 00000 0000 0 011223457899999999999999999998643
No 171
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.5e-35 Score=307.57 Aligned_cols=245 Identities=23% Similarity=0.313 Sum_probs=196.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-----hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-----IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-----~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
.+|...+.||.|+||.||+|... +..+|+|.+..... .....+.+|+.++++++||||+++++++.+.. ++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888899999999999999864 56999998864321 12356889999999999999999999986554 89
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
||||+++++|.+.+.... .+++.....++.|++.||.|||..+ |+||||+|+||+++.++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999886543 4788899999999999999999988 9999999999999999999999999997654
Q ss_pred CCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh-hhhcC
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL-DAQAG 632 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l-d~~~~ 632 (757)
..... ........|+..|+|||++.+..++.++||||||+++|+|++|+.||......... .... .....
T Consensus 156 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~~~~~ 226 (263)
T cd06625 156 TICSS---GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI------FKIATQPTNP 226 (263)
T ss_pred ccccc---cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH------HHHhccCCCC
Confidence 32111 00112346889999999999888999999999999999999999999643222111 1111 11122
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..|...+..+.+++.+||..+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 256 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEE 256 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 345566788999999999999999999875
No 172
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.9e-35 Score=311.38 Aligned_cols=254 Identities=26% Similarity=0.436 Sum_probs=197.2
Q ss_pred CCccceeeccCCcEEEEEEEECC-----eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH-----TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~-----~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
.|...+.||+|+||.||+|.+.. ..||||++.... ......|..|+.++++++||||+++++++.+.. ++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 36677889999999999998752 369999987542 334567999999999999999999999986554 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..+...
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999886543 35899999999999999999999987 999999999999999999999999999876543
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
...... .......++..|+|||++.++.++.++|||||||++|||++ |..||....... ....+........
T Consensus 160 ~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~------~~~~i~~~~~~~~ 232 (269)
T cd05065 160 TSDPTY-TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD------VINAIEQDYRLPP 232 (269)
T ss_pred cccccc-ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH------HHHHHHcCCcCCC
Confidence 221110 00111123467999999998899999999999999999986 999986432211 1111111111223
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
+...+..+.+++.+||..+|.+||++. .++..|+.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 267 (269)
T cd05065 233 PMDCPTALHQLMLDCWQKDRNARPKFG-QIVSTLDK 267 (269)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHh
Confidence 445677899999999999999999998 46555554
No 173
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2e-35 Score=322.01 Aligned_cols=243 Identities=24% Similarity=0.325 Sum_probs=187.6
Q ss_pred CCccceeeccCCcEEEEEEEECC--eEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|....+||+|+||.||++.+.+ ..+|+|++.... ......|.+|+.++..++||||+.+++++.+.. ++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 67888999999999999999864 589999986421 222345788999999999999999999986544 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++|+|.+++.+.. ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 y~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 82 YYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred ccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999997533 24888899999999999999999988 9999999999999999999999999997654322
Q ss_pred CCccccccccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh-
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ- 630 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~- 630 (757)
. .......||+.|+|||++. .+.++.++|||||||+||||++|+.||......+. +..++...
T Consensus 157 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~------~~~i~~~~~ 225 (332)
T cd05623 157 T-----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKE 225 (332)
T ss_pred c-----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH------HHHHhCCCc
Confidence 1 1123357999999999875 34688999999999999999999999964432221 11222111
Q ss_pred cCCCC---hhHHHHHHHHHHHHhhccCC--CCCccch
Q 004388 631 AGDWP---IKETKELAALGLSCAELRRK--DRPDLKN 662 (757)
Q Consensus 631 ~~~~p---~~~~~~l~~Li~~Cl~~~p~--~RPs~~~ 662 (757)
...+| ...+..+.+|+.+|+..++. .||++.+
T Consensus 226 ~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~ 262 (332)
T cd05623 226 RFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIED 262 (332)
T ss_pred cccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHH
Confidence 01122 24577899999998865433 3566653
No 174
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.8e-35 Score=309.22 Aligned_cols=246 Identities=23% Similarity=0.371 Sum_probs=195.6
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch---------hhHHHHHHHHHHHhcCCCceeeecccccCCc--
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---------QNKQFLQELEVLSKIRHPHLLLLLGACPDHG-- 471 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---------~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-- 471 (757)
|.....||.|+||.||+|... +..+|+|.+...... ..+.+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 556678999999999999874 568999988654322 1245788999999999999999999986544
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||+++++|.+++...+ .+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||+++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 89999999999999986543 4788899999999999999999987 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA 631 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~ 631 (757)
+.................|+..|+|||++.++.++.++|+|||||++|+|+||+.||....... .+..+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~ 229 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ------AIFKIGENAS 229 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH------HHHHHhccCC
Confidence 7532211111111223468899999999988889999999999999999999999996433221 1122222222
Q ss_pred CCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 632 GDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 632 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...|...+..+.+++.+||+.+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (267)
T cd06628 230 PEIPSNISSEAIDFLEKTFEIDHNKRPTAAE 260 (267)
T ss_pred CcCCcccCHHHHHHHHHHccCCchhCcCHHH
Confidence 3344556788999999999999999999874
No 175
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=352.07 Aligned_cols=251 Identities=26% Similarity=0.395 Sum_probs=195.5
Q ss_pred HhhcCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC----Cc
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD----HG 471 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~----~~ 471 (757)
....+|....+||.|+||.||++.+.. ..+|+|++.... ......|..|+.+|.+|+|||||+++++|.+ ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 345679999999999999999999864 588999886542 2345678999999999999999999998743 23
Q ss_pred eEEEEecCCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCC----CCEEEcCCCCCCeeecC---------
Q 004388 472 CLVYEYMENGSLEDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTKP----KPIIHRDMKPGNILLDH--------- 537 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~----~~ivHrDLKp~NILld~--------- 537 (757)
||||||+++|+|.++|.... ....+++..++.|+.||+.||.|||+.++ .+||||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 89999999999999987532 23469999999999999999999998652 35999999999999964
Q ss_pred --------CCceEEeeecCccccCCCCCCccccccccCCcccccCCCcccccc--CCCCCcchhhhHHHHHHHHHhCCCC
Q 004388 538 --------NLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT--GLISPKSDVYAYGMVILQLLTAKPA 607 (757)
Q Consensus 538 --------~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDvwSlGvil~elltG~~P 607 (757)
.+.+||+|||++..+..... .....||+.|+|||++.. ..++.++||||||||||+|+||+.|
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~-------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESM-------AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccccc-------ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 34589999999986543211 134579999999998754 4588999999999999999999999
Q ss_pred ccccchhhhhhchhhHHHHhhhhcCCCC-hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 608 IAITHKVETAIDEDNLAEILDAQAGDWP-IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 608 f~~~~~~~~~~~~~~l~~~ld~~~~~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
|........ +...+... ...| ...+..+.+|+..||..+|.+||++.+.+
T Consensus 243 F~~~~~~~q------li~~lk~~-p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 243 FHKANNFSQ------LISELKRG-PDLPIKGKSKELNILIKNLLNLSAKERPSALQCL 293 (1021)
T ss_pred CCcCCcHHH------HHHHHhcC-CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHh
Confidence 964332221 11112111 1122 23467899999999999999999998643
No 176
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.4e-35 Score=313.45 Aligned_cols=259 Identities=21% Similarity=0.363 Sum_probs=197.5
Q ss_pred cCCccceeeccCCcEEEEEEEEC------CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC----c
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----G 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~ 471 (757)
..|...+.||+|+||.||++.+. +..||+|.+.... ......|.+|+.++++++|||++++++++.+. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 34677889999999999999752 4589999987543 33446789999999999999999999998653 3
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||++|++|.+++.+.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 79999999999999886543 35899999999999999999999988 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhh--------hhchhhH
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVET--------AIDEDNL 623 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~--------~~~~~~l 623 (757)
+........ ......|+..|+|||++.+..++.++|||||||++|+|+|++.|+........ .......
T Consensus 159 ~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 159 IETDKEYYT---VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred cccCcccee---ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 654322111 11234677889999998888899999999999999999998876532111000 0000111
Q ss_pred HHHhhhh-cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 624 AEILDAQ-AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 624 ~~~ld~~-~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
...+... ....+...+..+.+|+.+||+.+|.+||++.+ ++..|+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~-il~~l~~ 282 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQN-LIEGFEA 282 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHH-HHHHHHh
Confidence 1111111 11123346788999999999999999999984 5555544
No 177
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.4e-35 Score=313.44 Aligned_cols=245 Identities=27% Similarity=0.388 Sum_probs=195.4
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
+|+....||.|+||.||++.+. +..||+|.+.... ......+.+|+.++.+++||||+++++++.... ++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4667788999999999999986 6799999886542 233467899999999999999999999886544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNT-KPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++++|..++........+++..+..++.+++.||.|||.. + |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999988886543334689999999999999999999964 5 9999999999999999999999999997654221
Q ss_pred CccccccccCCcccccCCCccccccC------CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTG------LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA 631 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~ 631 (757)
.....|++.|+|||++.+. .++.++|||||||++|+|+||+.||....... ....+..+.....
T Consensus 158 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~ 227 (286)
T cd06622 158 -------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQLSAIVDGDP 227 (286)
T ss_pred -------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHHHHHHhhcCC
Confidence 1234688999999987544 35889999999999999999999995332111 0112222333333
Q ss_pred CCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 632 GDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 632 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+...+..+.+++.+||..+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 258 (286)
T cd06622 228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQ 258 (286)
T ss_pred CCCCcccCHHHHHHHHHHcccCcccCCCHHH
Confidence 3445567889999999999999999999875
No 178
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=9.6e-36 Score=329.53 Aligned_cols=244 Identities=23% Similarity=0.335 Sum_probs=191.6
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
...+|.....||+|+||.||++... +..+|+|++.... ......+.+|+.+++.++||||+++++++.+.. ++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3457888999999999999999986 4589999986421 223445789999999999999999999986654 89
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
||||+++|+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999988543 3788889999999999999999988 9999999999999999999999999998764
Q ss_pred CCCCCccccccccCCcccccCCCccccccC----CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTG----LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
.... .......||+.|+|||++.+. .++.++|||||||+||+|+||++||...... +.+..+++.
T Consensus 194 ~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~------~~~~~i~~~ 262 (370)
T cd05621 194 ETGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV------GTYSKIMDH 262 (370)
T ss_pred cCCc-----eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH------HHHHHHHhC
Confidence 3221 112345799999999988653 3789999999999999999999999644321 222333332
Q ss_pred h-cCCCCh--hHHHHHHHHHHHHhhccCC--CCCccch
Q 004388 630 Q-AGDWPI--KETKELAALGLSCAELRRK--DRPDLKN 662 (757)
Q Consensus 630 ~-~~~~p~--~~~~~l~~Li~~Cl~~~p~--~RPs~~~ 662 (757)
. ...+|. ..+..+.+++.+|+..++. .||++.+
T Consensus 263 ~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e 300 (370)
T cd05621 263 KNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEE 300 (370)
T ss_pred CcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHH
Confidence 2 122333 3477889999999975443 3777764
No 179
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.4e-35 Score=309.96 Aligned_cols=245 Identities=28% Similarity=0.438 Sum_probs=189.6
Q ss_pred eeccCCcEEEEEEEECCe----EEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMGGYGTVYKGTFHHT----FAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~~----~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||+|+||.||+|.+.++ .+++|.+.... ......|.+|++++.++ +||||++++++|.... ++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 589999999999987542 46888876432 33446788999999999 7999999999986654 8999999999
Q ss_pred CHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 482 SLEDRLYRKN-------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 482 sL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
+|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCCC
Confidence 9999987532 1234789999999999999999999987 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHh
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEIL 627 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~l 627 (757)
+....... .......++.|+|||++....++.++|||||||++|+|+| |..||...... ..+..+.
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~~~~~ 225 (270)
T cd05047 159 SRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEKLP 225 (270)
T ss_pred ccccchhh-------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH------HHHHHHh
Confidence 86322110 1112234677999999988889999999999999999997 99999533211 1111111
Q ss_pred hhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 628 DAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 628 d~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.......+...+..+.+|+.+|+..+|.+||++. .++..|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~il~~l~~~ 268 (270)
T cd05047 226 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA-QILVSLNRM 268 (270)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHH-HHHHHHHHh
Confidence 1111223334567899999999999999999998 466666544
No 180
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.9e-35 Score=308.59 Aligned_cols=243 Identities=25% Similarity=0.403 Sum_probs=196.7
Q ss_pred cCCccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEEEEecCCC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLVYEYMENG 481 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV~Ey~~~g 481 (757)
.+|.....||.|+||.||+|...+..+|+|.+.... ....|.+|+.++.+++|||++++++++... .++||||+++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence 357778899999999999999988999999986543 346789999999999999999999988654 48999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 84 ~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----- 154 (254)
T cd05083 84 NLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----- 154 (254)
T ss_pred CHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence 9999987543 235889999999999999999999987 9999999999999999999999999987643211
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhHH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKET 639 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~~ 639 (757)
.....+..|+|||++.++.++.++|+|||||++|+|++ |++||......+ +...+... ....+...+
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 223 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-------VKECVEKGYRMEPPEGCP 223 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-------HHHHHhCCCCCCCCCcCC
Confidence 12244678999999988899999999999999999998 999996433211 11111111 122344567
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
..+.+++.+||..+|..||++.+ ++..|
T Consensus 224 ~~~~~li~~~l~~~p~~Rp~~~~-l~~~l 251 (254)
T cd05083 224 ADVYVLMTSCWETEPKKRPSFHK-LREKL 251 (254)
T ss_pred HHHHHHHHHHcCCChhhCcCHHH-HHHHH
Confidence 88999999999999999999984 44444
No 181
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.5e-35 Score=310.13 Aligned_cols=234 Identities=23% Similarity=0.382 Sum_probs=182.9
Q ss_pred eeccCCcEEEEEEEECC--------------eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceE
Q 004388 410 RIGMGGYGTVYKGTFHH--------------TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCL 473 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~--------------~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~L 473 (757)
.||+|+||.||+|.... ..|++|++..........|.+|+.++..++||||++++++|.+. .++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 58999999999998531 25889988766555556788999999999999999999998654 489
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc-------eEEeee
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV-------SKIGDV 546 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~-------~KL~DF 546 (757)
||||+++|+|..++.... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++. +|++||
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999988876533 35889999999999999999999987 999999999999987664 899999
Q ss_pred cCccccCCCCCCccccccccCCcccccCCCccccc-cCCCCCcchhhhHHHHHHHHH-hCCCCccccchhhhhhchhhHH
Q 004388 547 GLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQR-TGLISPKSDVYAYGMVILQLL-TAKPAIAITHKVETAIDEDNLA 624 (757)
Q Consensus 547 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDvwSlGvil~ell-tG~~Pf~~~~~~~~~~~~~~l~ 624 (757)
|++...... ....|+..|+|||++. +..++.++|||||||++|+|+ +|..||......+. .
T Consensus 157 g~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------~ 219 (262)
T cd05077 157 GIPITVLSR----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------E 219 (262)
T ss_pred CCCccccCc----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-------H
Confidence 998754321 2346788999999876 466899999999999999998 58888753221110 0
Q ss_pred HHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 625 EILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 625 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
...... ..........+.+|+.+||+.+|.+||++.+ ++..
T Consensus 220 ~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~-il~~ 260 (262)
T cd05077 220 RFYEGQ-CMLVTPSCKELADLMTHCMNYDPNQRPFFRA-IMRD 260 (262)
T ss_pred HHHhcC-ccCCCCChHHHHHHHHHHcCCChhhCcCHHH-HHHh
Confidence 111111 1111223567899999999999999999984 4443
No 182
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.2e-35 Score=314.64 Aligned_cols=258 Identities=25% Similarity=0.392 Sum_probs=194.6
Q ss_pred cCCccceeeccCCcEEEEEEEEC------------------CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeee
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH------------------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLL 463 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~------------------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l 463 (757)
++|+...+||+|+||.||++... ...+|+|++.... ......|.+|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888889999999999998543 2368999987543 3345679999999999999999999
Q ss_pred cccccCC--ceEEEEecCCCCHHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCe
Q 004388 464 LGACPDH--GCLVYEYMENGSLEDRLYRKNN--------TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNI 533 (757)
Q Consensus 464 ~g~~~~~--~~LV~Ey~~~gsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NI 533 (757)
++++.+. .++||||+++|+|.+++..... ...+++.....++.|++.||.|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 9998654 4899999999999999875331 124778899999999999999999988 99999999999
Q ss_pred eecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh--CCCCcccc
Q 004388 534 LLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT--AKPAIAIT 611 (757)
Q Consensus 534 Lld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt--G~~Pf~~~ 611 (757)
|++.++.++|+|||+++.+....... ......+++.|++||+...+.++.++|||||||++|||+| |..||...
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYR----IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEcCCCCEEeccCcccccccCCccee----ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 99999999999999998654322110 1122345678999998888889999999999999999998 67888533
Q ss_pred chhhhhhchhhHHH-HhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 612 HKVETAIDEDNLAE-ILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 612 ~~~~~~~~~~~l~~-~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
...+.....+.... .........+...+..+.+|+.+||..+|.+||++.+ |...|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~-i~~~l 294 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQE-IHATL 294 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH-HHHHH
Confidence 22111100000000 0000011123345688999999999999999999984 55544
No 183
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.2e-35 Score=312.82 Aligned_cols=246 Identities=26% Similarity=0.365 Sum_probs=194.2
Q ss_pred HhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccccC-------
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACPD------- 469 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~------- 469 (757)
.++..|.....||.|+||.||+|... +..||+|++.... .....+.+|+.++.++ +||||++++++|..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45667888889999999999999875 5689999986543 3345688999999998 69999999999853
Q ss_pred -CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 470 -HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 470 -~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence 2379999999999999887533 235889999999999999999999987 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhH
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNL 623 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l 623 (757)
+........ ......|++.|+|||++. ...++.++|||||||++|+|++|+.||..........
T Consensus 158 ~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----- 226 (272)
T cd06637 158 SAQLDRTVG------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----- 226 (272)
T ss_pred ceecccccc------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-----
Confidence 986543211 123457899999999875 3458889999999999999999999996433221111
Q ss_pred HHHhhh-hcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 624 AEILDA-QAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 624 ~~~ld~-~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..... .....+...+..+.+|+.+||..+|.+||++.+
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 265 (272)
T cd06637 227 -LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQ 265 (272)
T ss_pred -HHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHH
Confidence 11111 111112234578999999999999999999875
No 184
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.9e-35 Score=309.08 Aligned_cols=246 Identities=24% Similarity=0.378 Sum_probs=194.9
Q ss_pred CccceeeccCCcEEEEEEEE-CCeEEEEEEEccCCc------hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 405 FSENLRIGMGGYGTVYKGTF-HHTFAAVKVLQSKGN------IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~-~~~~vAvK~l~~~~~------~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
|.....||.|+||.||+|.. .+..+|+|.+..... .....+.+|++++++++||||++++++|.+.. ++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 66778899999999999987 456899998764421 12355889999999999999999999987654 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++++|.+++.+.. ++++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 82 EFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999986543 4788899999999999999999988 999999999999999999999999999865432
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh--hcCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA--QAGD 633 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~--~~~~ 633 (757)
..............|+..|+|||++.+..++.++|||||||++|+|+||+.||......... ..+... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~------~~~~~~~~~~~~ 229 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM------FYIGAHRGLMPR 229 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH------HHhhhccCCCCC
Confidence 11111111123457899999999998888999999999999999999999999643322211 111111 1122
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+...+..+.+++.+||..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 258 (265)
T cd06631 230 LPDSFSAAAIDFVTSCLTRDQHERPSALQ 258 (265)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCCCHHH
Confidence 34456788999999999999999999975
No 185
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-35 Score=315.61 Aligned_cols=243 Identities=23% Similarity=0.354 Sum_probs=196.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
.+|.....||.|+||.||+|... +..+++|.+..........+.+|+.+++.++||||+++++.|.+. .++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 46788889999999999999864 568999998776555567789999999999999999999988544 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.........
T Consensus 100 ~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 100 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred CCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 999999988532 3788899999999999999999988 999999999999999999999999998765432211
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh-hhh-cCCCCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL-DAQ-AGDWPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l-d~~-~~~~p~ 636 (757)
.....|++.|+|||++.+..++.++|||||||++|+|+||++||........ +.... ... ....+.
T Consensus 173 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~------~~~~~~~~~~~~~~~~ 240 (296)
T cd06654 173 ------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGTPELQNPE 240 (296)
T ss_pred ------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh------HHHHhcCCCCCCCCcc
Confidence 1234789999999999888899999999999999999999999964432111 11111 110 011233
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+..+.+++.+||..+|.+||++.+++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil 268 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELL 268 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHh
Confidence 4567899999999999999999988533
No 186
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.6e-35 Score=316.35 Aligned_cols=194 Identities=25% Similarity=0.408 Sum_probs=157.1
Q ss_pred ceeeccCCcEEEEEEEEC----CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC----ceEEEEecC
Q 004388 408 NLRIGMGGYGTVYKGTFH----HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCLVYEYME 479 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~----~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~LV~Ey~~ 479 (757)
..+||+|+||.||+|... +..||+|.+.... ....+.+|+.+|++++||||+++++++... .++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 457999999999999864 3589999886543 234578899999999999999999987432 379999996
Q ss_pred CCCHHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee----cCCCceEEeeecCc
Q 004388 480 NGSLEDRLYRKN------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL----DHNLVSKIGDVGLS 549 (757)
Q Consensus 480 ~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl----d~~~~~KL~DFGla 549 (757)
++|.+++.... ....+++..+..|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 58888765321 1235888999999999999999999988 9999999999999 45689999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccc
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAI 610 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~ 610 (757)
+.+...... ........||+.|+|||++.+ ..++.++|||||||++|+|+||++||..
T Consensus 160 ~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKP---LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCcc---ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 876533211 111234578999999998866 4589999999999999999999999963
No 187
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.2e-35 Score=311.23 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=201.1
Q ss_pred CCccceeeccCCcEEEEEEEEC------CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccC----Cce
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH------HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPD----HGC 472 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~------~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~----~~~ 472 (757)
.|.....||+|+||.||+|.+. +..+|||++...... ....|.+|+.+++.+.||||+++++++.. ..+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4566678999999999999864 458999998766543 46679999999999999999999998865 348
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
+||||+++++|.+++..... .+++..+..++.|++.||.|||..+ |+||||||+|||++.++.++|+|||++...
T Consensus 85 lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999875432 4899999999999999999999987 999999999999999999999999999877
Q ss_pred CCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh--------hchhhHH
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA--------IDEDNLA 624 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~--------~~~~~l~ 624 (757)
........ ......++..|++||++.+..++.++||||||+++|+|+||+.|+......... .....+.
T Consensus 160 ~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 160 PEDKDYYY---VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred ccCCccee---ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 64322111 112234567799999998888999999999999999999999988532111100 0011222
Q ss_pred HHhhhhc-CCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 625 EILDAQA-GDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 625 ~~ld~~~-~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..+.... ...+...+..+.+++.+||..+|.+||++. +|+..|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFA-DLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHH-HHHHHHhhc
Confidence 2222211 122334567899999999999999999998 476666654
No 188
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.6e-35 Score=308.49 Aligned_cols=253 Identities=23% Similarity=0.374 Sum_probs=199.4
Q ss_pred CCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~E 476 (757)
+|.....||.|+||.||+|.. .+..++||.+.... ......|.+|+.+++.++||||+++++++.+. .++|||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 577778899999999999986 46799999876432 22345788999999999999999999998654 389999
Q ss_pred ecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 477 YMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 477 y~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
|+++++|.+++... .....+++..+..++.+|+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 99999999988642 22346899999999999999999999988 999999999999999999999999998866533
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh-hcCC-
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA-QAGD- 633 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~-~~~~- 633 (757)
... .....|++.|+|||++.+..++.++|+||||+++|+|++|..||....... ..+...+.. ....
T Consensus 160 ~~~------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~ 228 (267)
T cd08229 160 TTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-----YSLCKKIEQCDYPPL 228 (267)
T ss_pred Ccc------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH-----HHHhhhhhcCCCCCC
Confidence 211 123468999999999988889999999999999999999999985322110 011111111 1111
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
.+...+..+.+++.+||..+|.+||++. .|+..++++
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~i~~~~~~~ 265 (267)
T cd08229 229 PSDHYSEELRQLVNMCINPDPEKRPDIT-YVYDVAKRM 265 (267)
T ss_pred CcccccHHHHHHHHHhcCCCcccCCCHH-HHHHHHhhh
Confidence 1224567899999999999999999998 576766654
No 189
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.6e-35 Score=311.63 Aligned_cols=241 Identities=23% Similarity=0.383 Sum_probs=191.7
Q ss_pred CccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCC
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
|+....||.|+||.||+|.+.. ..+++|.+..........|.+|+++++.++|||+++++++|.+.. ++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 4556679999999999999864 578888887655555677899999999999999999999886544 899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|..++.... .++++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 87 ~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--- 158 (282)
T cd06643 87 GAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--- 158 (282)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccccccc---
Confidence 99998876532 35899999999999999999999987 99999999999999999999999999876543211
Q ss_pred ccccccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh--cCC
Q 004388 561 TTYKNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ--AGD 633 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~--~~~ 633 (757)
......||+.|+|||++. +..++.++|||||||++|+|++|++||........ ...+.... ...
T Consensus 159 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~ 229 (282)
T cd06643 159 ---RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKSEPPTLA 229 (282)
T ss_pred ---ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH------HHHHhhcCCCCCC
Confidence 123347899999999873 34578899999999999999999999964332211 11111111 111
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.|...+..+.+++.+||..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 258 (282)
T cd06643 230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQ 258 (282)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHH
Confidence 23345678999999999999999999875
No 190
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.7e-35 Score=316.30 Aligned_cols=246 Identities=27% Similarity=0.367 Sum_probs=191.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
++|...++||+|+||.||++.+. +..+|+|.+.... .....++.+|++++.+++||||++++++|.+.. ++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888899999999999999885 4578888876542 233456889999999999999999999986544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNT-KPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
+++++|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 9999999998654 3488899999999999999999974 5 9999999999999999999999999987653321
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhh--hhch--------------
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVET--AIDE-------------- 620 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~-------------- 620 (757)
.....|++.|+|||++.+..++.++|||||||++|+|+||+.||........ .+..
T Consensus 155 --------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 155 --------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred --------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 1234789999999998888899999999999999999999999853221100 0000
Q ss_pred ----------hhHHHHhhhhcC----CCC-hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 ----------DNLAEILDAQAG----DWP-IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 ----------~~l~~~ld~~~~----~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....+.++.... ..| ...+..+.+++.+||..+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 283 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKE 283 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHH
Confidence 000111111110 111 124567999999999999999999885
No 191
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.3e-35 Score=323.71 Aligned_cols=248 Identities=21% Similarity=0.253 Sum_probs=189.7
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccC-------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPD------- 469 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------- 469 (757)
...+|.....||+|+||.||++... +..||||++... .......+.+|+.+++.++||||+++++++..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3467999999999999999999875 568999998643 22345568899999999999999999998742
Q ss_pred -CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 470 -HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 470 -~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
..|+||||+++ +|...+.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence 23899999975 56665532 3778888999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc------h--
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID------E-- 620 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~------~-- 620 (757)
++...... ......||+.|+|||++.+..++.++|||||||++|+|+||+.||........... .
T Consensus 170 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 242 (359)
T cd07876 170 ARTACTNF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 242 (359)
T ss_pred ccccccCc-------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 97543221 12345789999999999988999999999999999999999999974432111000 0
Q ss_pred --------hhHHHHhhhh-----------cCCC--------ChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 621 --------DNLAEILDAQ-----------AGDW--------PIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 621 --------~~l~~~ld~~-----------~~~~--------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+....... ...| +...+..+.+|+.+||..||.+||++.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 313 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh
Confidence 0000000000 0011 011246789999999999999999998643
No 192
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.6e-35 Score=327.84 Aligned_cols=245 Identities=24% Similarity=0.331 Sum_probs=191.3
Q ss_pred HHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc-
Q 004388 398 IESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG- 471 (757)
Q Consensus 398 i~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~- 471 (757)
+....++|.....||+|+||.||++... +..+|+|++.... ......+.+|+.++..++||||+++++++.+..
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3445578999999999999999999986 4589999986422 223445788999999999999999999986654
Q ss_pred -eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 472 -CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 472 -~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
++||||++||+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 8999999999999988543 3778888899999999999999988 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCccccccC----CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHH
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG----LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEI 626 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ 626 (757)
.+..... .......||+.|+|||++... .++.++|||||||++|+|++|++||....... .+..+
T Consensus 191 ~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i 259 (371)
T cd05622 191 KMNKEGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKI 259 (371)
T ss_pred EcCcCCc-----ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HHHHH
Confidence 7653221 112345799999999988643 37899999999999999999999997543221 12222
Q ss_pred hhhh-cCCCC--hhHHHHHHHHHHHHhhccCCC---CCccc
Q 004388 627 LDAQ-AGDWP--IKETKELAALGLSCAELRRKD---RPDLK 661 (757)
Q Consensus 627 ld~~-~~~~p--~~~~~~l~~Li~~Cl~~~p~~---RPs~~ 661 (757)
+... ...+| ...+..+.+++.+|+. +|.. ||++.
T Consensus 260 ~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ 299 (371)
T cd05622 260 MNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGVE 299 (371)
T ss_pred HcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHH
Confidence 2211 11222 2467889999999998 5554 55655
No 193
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-35 Score=310.59 Aligned_cols=246 Identities=23% Similarity=0.331 Sum_probs=192.2
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
++|....+||.|+||.||+|... +..||+|++..........+.+|+.++..++||||+++++++.+.. ++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777788999999999999874 5689999987665445566889999999999999999999886544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++...+ .+++.....++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06645 89 GGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATIA- 161 (267)
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCccc-
Confidence 9999999886543 4889999999999999999999988 99999999999999999999999999876543211
Q ss_pred ccccccccCCcccccCCCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQR---TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
......|++.|+|||++. .+.++.++|||||||++|+|++|.+||............ ......+......
T Consensus 162 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~ 234 (267)
T cd06645 162 -----KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM--TKSNFQPPKLKDK 234 (267)
T ss_pred -----ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh--hccCCCCCccccc
Confidence 123457899999999874 456889999999999999999999998533221110000 0000000000011
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+.+++.+||..+|.+||++.+
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~R~~~~~ 261 (267)
T cd06645 235 MKWSNSFHHFVKMALTKNPKKRPTAEK 261 (267)
T ss_pred CCCCHHHHHHHHHHccCCchhCcCHHH
Confidence 134567899999999999999999874
No 194
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.3e-35 Score=311.71 Aligned_cols=249 Identities=20% Similarity=0.302 Sum_probs=190.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||.|+||.||+|... +..||||++.... ......+.+|+.++++++||||+++++++.+.. ++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677889999999999999885 5689999986542 223456889999999999999999999986544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++ ++|.+++........+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 689888865544456899999999999999999999988 99999999999999999999999999976543211
Q ss_pred CccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch----------------
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE---------------- 620 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~---------------- 620 (757)
......+++.|+|||++.+. .++.++|||||||++|+|+||++||............
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 157 ------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred ------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcch
Confidence 11234678999999987654 4789999999999999999999999644322111100
Q ss_pred --hhHHHHhhhhc----CCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 --DNLAEILDAQA----GDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 --~~l~~~ld~~~----~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
........... .......+.++.+++.+||..+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ 278 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKK 278 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHH
Confidence 00000000000 0011124677889999999999999999874
No 195
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=335.84 Aligned_cols=250 Identities=20% Similarity=0.278 Sum_probs=186.6
Q ss_pred HHHHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCC------Cceeeecccc
Q 004388 396 EEIESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRH------PHLLLLLGAC 467 (757)
Q Consensus 396 ~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~H------pniv~l~g~~ 467 (757)
+++...+.+|....+||+|+||.||+|.+. +..||||+++... .....+..|+.++..++| ++++.++++|
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344556778999999999999999999874 5689999986432 223446678888877754 4588888887
Q ss_pred cCC---ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCC----
Q 004388 468 PDH---GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNL---- 539 (757)
Q Consensus 468 ~~~---~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~---- 539 (757)
... .|+|||++ +++|.+++...+ .+++..+..|+.||+.||.|||+ .+ ||||||||+||||+.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccc
Confidence 543 48999988 678988886543 48999999999999999999997 46 99999999999998765
Q ss_pred ------------ceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCC
Q 004388 540 ------------VSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPA 607 (757)
Q Consensus 540 ------------~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~P 607 (757)
.+||+|||++..... ..+..+||+.|+|||++.+..++.++|||||||+||||+||++|
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG~~~~~~~---------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p 344 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLGGCCDERH---------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL 344 (467)
T ss_pred cccccccCCCCceEEECCCCccccCcc---------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 499999998864321 12346899999999999999999999999999999999999999
Q ss_pred ccccchhhhhhch-----------------hhHHHHhhhhcC------------------CCChhHHHHHHHHHHHHhhc
Q 004388 608 IAITHKVETAIDE-----------------DNLAEILDAQAG------------------DWPIKETKELAALGLSCAEL 652 (757)
Q Consensus 608 f~~~~~~~~~~~~-----------------~~l~~~ld~~~~------------------~~p~~~~~~l~~Li~~Cl~~ 652 (757)
|......+..... .....+.+.... .........+.+|+.+||..
T Consensus 345 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 424 (467)
T PTZ00284 345 YDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHY 424 (467)
T ss_pred CCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCc
Confidence 9643322110000 000001100000 00001245678999999999
Q ss_pred cCCCCCccch
Q 004388 653 RRKDRPDLKN 662 (757)
Q Consensus 653 ~p~~RPs~~~ 662 (757)
||.+||++.+
T Consensus 425 dP~~R~ta~e 434 (467)
T PTZ00284 425 DRQKRLNARQ 434 (467)
T ss_pred ChhhCCCHHH
Confidence 9999999985
No 196
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-35 Score=327.70 Aligned_cols=244 Identities=22% Similarity=0.283 Sum_probs=190.4
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|...+.||+|+||.||++... +..||||++.... ......+.+|+.++..++||||+++++.+.+.. +||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 6788899999999999999885 5689999987432 223456788999999999999999999987654 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|++||+|.+++.+.+ .+++.....++.|++.||.|||+.+ |+||||||+|||++.+|.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 82 FLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred CCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999986543 4888899999999999999999988 9999999999999999999999999987553211
Q ss_pred CCc-----------------------------cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCC
Q 004388 557 SFV-----------------------------STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPA 607 (757)
Q Consensus 557 ~~~-----------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~P 607 (757)
... .........+||+.|+|||++.+..++.++|||||||++|||+||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 000 000011235799999999999988999999999999999999999999
Q ss_pred ccccchhhhhhchhhHHHHhhhh-cCCCCh--hHHHHHHHHHHHHhhccCCCCCcc
Q 004388 608 IAITHKVETAIDEDNLAEILDAQ-AGDWPI--KETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 608 f~~~~~~~~~~~~~~l~~~ld~~-~~~~p~--~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
|....... .+..++... ....|. ..+..+.+|+.+|+. +|.+|++.
T Consensus 236 f~~~~~~~------~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~ 284 (360)
T cd05627 236 FCSETPQE------TYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS 284 (360)
T ss_pred CCCCCHHH------HHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC
Confidence 96443221 111122111 111121 246788999988774 99999975
No 197
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.2e-35 Score=305.83 Aligned_cols=247 Identities=26% Similarity=0.361 Sum_probs=197.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
++|.....||.|+||.||+|... +..+++|++..........+.+|+.++++++||||+++++++.+.. +++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46888899999999999999875 4689999988665556678899999999999999999999886544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++.... ..++...+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++........
T Consensus 83 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 83 GGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 9999999886542 35889999999999999999999988 99999999999999999999999999976543211
Q ss_pred ccccccccCCcccccCCCccccccC---CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTG---LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
......++..|+|||.+.+. .++.++|||||||++|+|+||++||............. ...+.......+
T Consensus 157 -----~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~ 229 (262)
T cd06613 157 -----KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS--KSNFPPPKLKDK 229 (262)
T ss_pred -----ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hccCCCccccch
Confidence 12345789999999998766 78999999999999999999999996443222211000 000011111123
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+.+++.+||..+|.+||++.+
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ 256 (262)
T cd06613 230 EKWSPVFHDFIKKCLTKDPKKRPTATK 256 (262)
T ss_pred hhhhHHHHHHHHHHcCCChhhCCCHHH
Confidence 345678999999999999999999975
No 198
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=7.2e-35 Score=308.85 Aligned_cols=252 Identities=25% Similarity=0.422 Sum_probs=200.1
Q ss_pred cCCccceeeccCCcEEEEEEEECC------eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC-ceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH------TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-GCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~------~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~~LV 474 (757)
..|.....||+|+||.||+|.+.. ..+|+|++..... .....+.+|+.++.+++||||++++++|... .++|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 356777889999999999998642 2689998876543 3456788999999999999999999998653 4899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++|+|.+++..... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 87 TQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999876433 4899999999999999999999977 99999999999999999999999999987653
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AG 632 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~ 632 (757)
.... +......++..|++||.+..+.++.++|+|||||++|||+| |+.||...... .+...+... ..
T Consensus 162 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~ 230 (279)
T cd05057 162 DEKE----YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV-------EIPDLLEKGERL 230 (279)
T ss_pred cccc----eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-------HHHHHHhCCCCC
Confidence 3221 11122345678999999988889999999999999999999 99999643211 112222211 12
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..|...+..+.+++.+||..+|..||++. .++..|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~-~l~~~l~~~ 268 (279)
T cd05057 231 PQPPICTIDVYMVLVKCWMIDAESRPTFK-ELINEFSKM 268 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHH
Confidence 23444567899999999999999999998 466666655
No 199
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.7e-35 Score=311.27 Aligned_cols=241 Identities=26% Similarity=0.408 Sum_probs=187.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhc---CCCceeeecccccCC------
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKI---RHPHLLLLLGACPDH------ 470 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l---~Hpniv~l~g~~~~~------ 470 (757)
+|.....||+|+||.||+|... +..||+|.+..... .....+.+|+.+++.+ +||||+++++++.+.
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4777889999999999999885 55899998875422 1234566788877765 699999999987431
Q ss_pred -ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 471 -GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
.++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence 379999997 58888876543 245899999999999999999999988 999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
+....... .....||+.|+|||++.+..++.++|||||||++|+|++|++||........ +..++..
T Consensus 156 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~------~~~~~~~ 222 (288)
T cd07863 156 RIYSCQMA-------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ------LGKIFDL 222 (288)
T ss_pred ccccCccc-------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH------HHHHHHH
Confidence 87653221 1334789999999999888899999999999999999999999964322111 1111110
Q ss_pred h----cCCC----------------------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 630 Q----AGDW----------------------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 630 ~----~~~~----------------------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. ...| ....+..+.+++.+|++.||.+||++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~ 281 (288)
T cd07863 223 IGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFR 281 (288)
T ss_pred hCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHH
Confidence 0 0000 1134567899999999999999999875
No 200
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.9e-35 Score=311.82 Aligned_cols=234 Identities=24% Similarity=0.398 Sum_probs=181.7
Q ss_pred eeccCCcEEEEEEEEC--------------------------CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeee
Q 004388 410 RIGMGGYGTVYKGTFH--------------------------HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLL 463 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--------------------------~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l 463 (757)
.||+|+||.||+|.+. ...|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5999999999998742 12588998876554445678899999999999999999
Q ss_pred cccccCCc--eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC--
Q 004388 464 LGACPDHG--CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-- 539 (757)
Q Consensus 464 ~g~~~~~~--~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-- 539 (757)
+++|.+.. ++||||+++|+|..++.... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 99996544 89999999999998886533 35888999999999999999999987 99999999999997644
Q ss_pred -----ceEEeeecCccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHH-hCCCCccccc
Q 004388 540 -----VSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLL-TAKPAIAITH 612 (757)
Q Consensus 540 -----~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~ell-tG~~Pf~~~~ 612 (757)
.+||+|||++...... ....+++.|+|||++.+ ..++.++|||||||++|||+ +|+.||....
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred cCccceeeecCCccccccccc----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 4799999998643321 12357888999998865 56899999999999999995 7999986432
Q ss_pred hhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 613 KVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 613 ~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
... ....+... ...|......+.+++.+||+.+|.+||++.+ |+..
T Consensus 227 ~~~-------~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~-il~~ 272 (274)
T cd05076 227 PSE-------KERFYEKK-HRLPEPSCKELATLISQCLTYEPTQRPSFRT-ILRD 272 (274)
T ss_pred hHH-------HHHHHHhc-cCCCCCCChHHHHHHHHHcccChhhCcCHHH-HHHh
Confidence 211 11111111 1122233467999999999999999999984 4443
No 201
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.4e-35 Score=325.28 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=190.3
Q ss_pred CCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC-------ce
Q 004388 404 SFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-------GC 472 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-------~~ 472 (757)
+|+..++||.|+||.||++.. .+..||||++.... ......+.+|+.+|+.++||||+++++++... .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477888999999999999986 46799999886432 23345788999999999999999999998543 48
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
+||||+. ++|.+.+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 5788877543 35889999999999999999999988 999999999999999999999999999865
Q ss_pred CCCCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh------chh----
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI------DED---- 621 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~------~~~---- 621 (757)
...... ......+|+.|+|||++.+. .++.++|||||||++|||+||++||.......... ...
T Consensus 154 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 154 EPDESK-----HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred ccCccc-----cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 433211 12345789999999988764 57899999999999999999999996443221100 000
Q ss_pred ------hHHHHhhhhcC---------CCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 622 ------NLAEILDAQAG---------DWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 622 ------~l~~~ld~~~~---------~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.....+..... ......+..+.+|+.+||+.||.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 286 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADAL 286 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHh
Confidence 00000100000 01112356789999999999999999998644
No 202
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.4e-35 Score=305.90 Aligned_cols=243 Identities=21% Similarity=0.322 Sum_probs=195.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC-CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK-GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~-~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
+|....+||.|+||.||++... +..+|+|.+... .....+.+.+|+.+++.++||||+++++.+.+.. ++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677889999999999999875 568999988643 2334567889999999999999999999986554 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|.+++.... ...++......++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++.........
T Consensus 81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 9999999886433 335788899999999999999999988 999999999999999999999999999766533211
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhH
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKE 638 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~ 638 (757)
.....|++.|+|||++.+..++.++|+||||+++|+|++|++||........ ...+........|...
T Consensus 157 ------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~ 224 (255)
T cd08219 157 ------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL------ILKVCQGSYKPLPSHY 224 (255)
T ss_pred ------cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH------HHHHhcCCCCCCCccc
Confidence 1235789999999999888899999999999999999999999964332111 1111111122233445
Q ss_pred HHHHHHHHHHHhhccCCCCCccch
Q 004388 639 TKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+..+.+++.+||+.+|.+||++.+
T Consensus 225 ~~~~~~li~~~l~~~P~~Rp~~~~ 248 (255)
T cd08219 225 SYELRSLIKQMFKRNPRSRPSATT 248 (255)
T ss_pred CHHHHHHHHHHHhCCcccCCCHHH
Confidence 678999999999999999999985
No 203
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6.2e-35 Score=307.64 Aligned_cols=248 Identities=25% Similarity=0.322 Sum_probs=183.8
Q ss_pred eeccCCcEEEEEEEECC----eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFHH----TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~----~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gs 482 (757)
.||+|+||.||+|.+.+ ..+|+|.+..... .....|.+|+.++++++||||++++++|.+. .++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998643 3689998865432 2335688999999999999999999998654 389999999999
Q ss_pred HHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 483 LEDRLYRKNN--TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 483 L~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|.+++..... ....++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~-- 156 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY-- 156 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCccee--
Confidence 9999875332 234667788899999999999999987 999999999999999999999999999754332211
Q ss_pred ccccccCCcccccCCCccccccC-------CCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHH-hhhhc
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTG-------LISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEI-LDAQA 631 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~-ld~~~ 631 (757)
.......|++.|+|||++... .++.++||||||+++|||++ |+.||......+.. .. ..... .....
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~-~~-~~~~~~~~~~~ 232 (269)
T cd05087 157 --VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL-TY-TVREQQLKLPK 232 (269)
T ss_pred --ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH-HH-HhhcccCCCCC
Confidence 111334678899999987532 35789999999999999996 99999643222110 00 00000 00000
Q ss_pred CCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 632 GDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 632 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
+......+..+.+++.+|+ .+|.+||++.+ |+..|
T Consensus 233 ~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~-l~~~l 267 (269)
T cd05087 233 PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEE-VHLLL 267 (269)
T ss_pred CccCCCCChHHHHHHHHHh-cCcccCCCHHH-HHHHh
Confidence 1112234567889999999 68999999985 44443
No 204
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.8e-35 Score=303.28 Aligned_cols=242 Identities=24% Similarity=0.373 Sum_probs=190.5
Q ss_pred eeccCCcEEEEEEEEC-CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCCHHH
Q 004388 410 RIGMGGYGTVYKGTFH-HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGSLED 485 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gsL~~ 485 (757)
.||.|+||.||+|... +..+|+|++..... .....|.+|+.++..++||||++++++|.+. .++||||+++|+|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 5899999999999864 46899998875543 2344688999999999999999999998654 489999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccc
Q 004388 486 RLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKN 565 (757)
Q Consensus 486 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~ 565 (757)
++.... ..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++......... ..
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-----~~ 151 (250)
T cd05085 82 FLRKKK--DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-----SS 151 (250)
T ss_pred HHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc-----cC
Confidence 886543 34789999999999999999999987 999999999999999999999999998754432110 11
Q ss_pred cCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHH
Q 004388 566 TGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAA 644 (757)
Q Consensus 566 ~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~ 644 (757)
....+++.|+|||++.++.++.++||||||+++|+|++ |..||........ ...+........+...+..+.+
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 225 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA------REQVEKGYRMSCPQKCPDDVYK 225 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH------HHHHHcCCCCCCCCCCCHHHHH
Confidence 12244678999999998899999999999999999998 9999963322111 1111111122234456789999
Q ss_pred HHHHHhhccCCCCCccchhhhhHH
Q 004388 645 LGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 645 Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
++.+|+..+|.+||++.+ ++..|
T Consensus 226 li~~~l~~~p~~Rp~~~~-l~~~l 248 (250)
T cd05085 226 VMQRCWDYKPENRPKFSE-LQKEL 248 (250)
T ss_pred HHHHHcccCcccCCCHHH-HHHHh
Confidence 999999999999999984 54443
No 205
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9e-36 Score=327.23 Aligned_cols=242 Identities=26% Similarity=0.379 Sum_probs=204.2
Q ss_pred ceeeccCCcEEEEEEEECC-----eEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCCc-eEEEEecCC
Q 004388 408 NLRIGMGGYGTVYKGTFHH-----TFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDHG-CLVYEYMEN 480 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~-----~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-~LV~Ey~~~ 480 (757)
..+||+|.||.|++|.|+. -.||||.+..+... ...+|++|+.+|.+|+|||+++|||...+.. .+|||+++.
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl 194 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL 194 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence 3469999999999999963 38999999887654 6788999999999999999999999998655 789999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|||.++|.. .....|.......++.|||.|+.||.+.+ +|||||-..||||-....+|||||||++.+.......
T Consensus 195 GSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y- 269 (1039)
T KOG0199|consen 195 GSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY- 269 (1039)
T ss_pred chHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcce-
Confidence 999999987 44566888889999999999999999988 9999999999999999999999999999988765543
Q ss_pred ccccccC-CcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChh
Q 004388 561 TTYKNTG-PVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIK 637 (757)
Q Consensus 561 ~~~~~~~-~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~ 637 (757)
.+.. ..-.+.|+|||.++...++.++|||+|||+||||+| |..||.... ...+.+.+|.. ....|..
T Consensus 270 ---vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~-------g~qIL~~iD~~erLpRPk~ 339 (1039)
T KOG0199|consen 270 ---VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR-------GIQILKNIDAGERLPRPKY 339 (1039)
T ss_pred ---EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC-------HHHHHHhccccccCCCCCC
Confidence 2222 234677999999999999999999999999999997 567875332 22334444532 3456788
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
++..+++++..||..+|.+||++..++
T Consensus 340 csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHHHHH
Confidence 999999999999999999999998543
No 206
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.6e-35 Score=319.11 Aligned_cols=237 Identities=25% Similarity=0.325 Sum_probs=185.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|...+.||+|+||.||++... +..||+|++.... ......+.+|+.++..++||||+.+++++.+.. ||||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888899999999999999875 4589999986421 223345788999999999999999999986554 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||++||+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999997533 24888899999999999999999988 999999999999999999999999999876533
Q ss_pred CCCccccccccCCcccccCCCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRT-----GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ 630 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~ 630 (757)
... ......||+.|+|||++.+ +.++.++|||||||+||+|+||+.||......+ .+..+....
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~ 224 (331)
T cd05624 156 GTV-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHE 224 (331)
T ss_pred Cce-----eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCC
Confidence 211 1123579999999998865 568899999999999999999999996433221 111222111
Q ss_pred -cCCCC---hhHHHHHHHHHHHHhhccCC
Q 004388 631 -AGDWP---IKETKELAALGLSCAELRRK 655 (757)
Q Consensus 631 -~~~~p---~~~~~~l~~Li~~Cl~~~p~ 655 (757)
...+| ...+..+.+++.+|+..+++
T Consensus 225 ~~~~~p~~~~~~~~~~~~li~~ll~~~~~ 253 (331)
T cd05624 225 ERFQFPSHITDVSEEAKDLIQRLICSRER 253 (331)
T ss_pred CcccCCCccccCCHHHHHHHHHHccCchh
Confidence 01112 23467899999999986543
No 207
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-36 Score=295.53 Aligned_cols=261 Identities=21% Similarity=0.272 Sum_probs=203.0
Q ss_pred hcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC-------Cce
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD-------HGC 472 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~-------~~~ 472 (757)
.+.|.+.+.||+|||+-||++.. .+..||+|++......+.+..++|++..++++|||+++++.++.. ..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 45688899999999999999874 456899999887777778889999999999999999999998731 238
Q ss_pred EEEEecCCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 473 LVYEYMENGSLEDRLYRKNN-TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
|+++|...|||.+.+..... +..+++.+.+.|+.+|++||.+||...| |+.||||||.|||+.+.+.++|.|||.++.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999999876433 3368999999999999999999999884 799999999999999999999999999976
Q ss_pred cCCCCC---CccccccccCCcccccCCCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHH
Q 004388 552 LNSDPS---FVSTTYKNTGPVGTLCYIDPEYQR---TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 552 ~~~~~~---~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
..-.-. ............+|..|.|||.+. +...+.++|||||||+||.|+.|..||...-. ..+.+.-
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-----~GgSlaL 253 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-----QGGSLAL 253 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-----cCCeEEE
Confidence 542111 111111123346899999999775 34578999999999999999999999962211 1122211
Q ss_pred HhhhhcCCCCh--hHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 626 ILDAQAGDWPI--KETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 626 ~ld~~~~~~p~--~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
.+....-.||. .++..+.+++.+|++.||.+||++.+ ++..++
T Consensus 254 Av~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~-ll~~~d 298 (302)
T KOG2345|consen 254 AVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPE-LLSKLD 298 (302)
T ss_pred eeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHH-HHHHHH
Confidence 11111112222 37889999999999999999999984 444443
No 208
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.4e-35 Score=307.88 Aligned_cols=244 Identities=27% Similarity=0.379 Sum_probs=182.7
Q ss_pred eeccCCcEEEEEEEEC----CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFH----HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~----~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gs 482 (757)
.||+|+||.||+|... ...+++|.+.... ......|.+|+.+++.++||||+++++.|.+.. ++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 5899999999999753 2368888765433 233456889999999999999999999986554 89999999999
Q ss_pred HHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 483 LEDRLYRKNN--TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 483 L~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|.+++..... ....++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~- 157 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI- 157 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee-
Confidence 9999876432 223467778899999999999999988 9999999999999999999999999987543322111
Q ss_pred ccccccCCcccccCCCcccccc-------CCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh--
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRT-------GLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-- 630 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~-------~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-- 630 (757)
......+++.|+|||++.. ..++.++|||||||++|||++ |..||......+ .+...+...
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~~~~~~~~~~ 228 (269)
T cd05042 158 ---TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ------VLKQVVREQDI 228 (269)
T ss_pred ---ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH------HHHHHhhccCc
Confidence 1123456788999998642 356889999999999999999 788885332111 111111111
Q ss_pred ---cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 631 ---AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 631 ---~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
....+...+..+.+++..|| .+|.+||++.+ |+..|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~-v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEE-VHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHH-HHHHh
Confidence 11233355677888999998 59999999884 54443
No 209
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.4e-34 Score=301.89 Aligned_cols=243 Identities=25% Similarity=0.373 Sum_probs=196.4
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC-C--ceEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD-H--GCLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~-~--~~LV~E 476 (757)
+|...+.||.|+||.||++... +..+|+|.+.... ......+.+|++++++++|||++++++.+.. . .++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4777889999999999999875 4589999986542 2334568899999999999999999988753 2 379999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++++|.+++.... ...+++.++..++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999887533 345899999999999999999999988 9999999999999999999999999998764322
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
. ......|++.|+|||++.+..++.++|||||||++++|+||+.||....... ....+........+.
T Consensus 157 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~ 224 (257)
T cd08223 157 D------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS------LVYRIIEGKLPPMPK 224 (257)
T ss_pred C------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHhcCCCCCcc
Confidence 1 1234568999999999998889999999999999999999999996432111 111122222223345
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+..+.+++.+|+..+|.+||++.+
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~ 250 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKS 250 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHH
Confidence 56788999999999999999999885
No 210
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=324.03 Aligned_cols=247 Identities=25% Similarity=0.452 Sum_probs=204.2
Q ss_pred ccceeeccCCcEEEEEEEECC------eEEEEEEEccC-CchhhHHHHHHHHHHHhcCCCceeeecccccCCc-eEEEEe
Q 004388 406 SENLRIGMGGYGTVYKGTFHH------TFAAVKVLQSK-GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG-CLVYEY 477 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~~------~~vAvK~l~~~-~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-~LV~Ey 477 (757)
...++||.|-||.||+|.+.. -.||||..+.+ .....+.|++|..+|++++|||||+|+|.|.+.. .||||+
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL 471 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMEL 471 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEec
Confidence 345679999999999998742 27899988764 3445788999999999999999999999998876 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++-|.|..+|..+... ++......++.||+.||.|||+.. +|||||-..|||+..+-.+||+||||++.+.+..-
T Consensus 472 ~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 472 APLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred ccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence 9999999999876654 788888999999999999999988 99999999999999999999999999999876532
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
|+.+...-...|||||-++...++.+||||.|||++||+|. |..||......+ -+..+-.......|.
T Consensus 547 -----YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD------VI~~iEnGeRlP~P~ 615 (974)
T KOG4257|consen 547 -----YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD------VIGHIENGERLPCPP 615 (974)
T ss_pred -----hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc------eEEEecCCCCCCCCC
Confidence 33344455678999999999999999999999999999985 999996432211 111111223456788
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
.+++.|..|+.+||.++|.+||.+.+ +...|.
T Consensus 616 nCPp~LYslmskcWayeP~kRPrfte-i~~~ls 647 (974)
T KOG4257|consen 616 NCPPALYSLMSKCWAYEPSKRPRFTE-IKAILS 647 (974)
T ss_pred CCChHHHHHHHHHhccCcccCCcHHH-HHHHHH
Confidence 89999999999999999999999985 444433
No 211
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.7e-35 Score=312.63 Aligned_cols=243 Identities=23% Similarity=0.363 Sum_probs=198.7
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
.+|+....||.|+||.||+|.. .+..|++|.+..........+.+|+.+++.++|||++.+++++.+. .++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688888999999999999986 4678999998766555567789999999999999999999998654 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++... .+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 170 (296)
T cd06655 99 AGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS- 170 (296)
T ss_pred CCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc-
Confidence 999999987532 4889999999999999999999988 99999999999999999999999999886553321
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh--cCCCCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ--AGDWPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~--~~~~p~ 636 (757)
......|++.|+|||.+.+..++.++|||||||++|+|+||+.||......... ..+.... ....+.
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~~~~~~~~~~~ 239 (296)
T cd06655 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNGTPELQNPE 239 (296)
T ss_pred -----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhcCCcccCCcc
Confidence 112346899999999998888999999999999999999999999754432221 1111111 112234
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+..+.+++.+||..+|.+||++.+++
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 4567899999999999999999998644
No 212
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.4e-35 Score=304.62 Aligned_cols=251 Identities=29% Similarity=0.467 Sum_probs=199.5
Q ss_pred hcCCccceeeccCCcEEEEEEEECC-eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
.++|....+||.|+||.||+|.+.+ ..+|||.+.... .....+.+|+.++++++||||+++++++.+. .++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 3578888999999999999998764 478999887543 3456799999999999999999999998653 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++.... ...+++..+..++.+++.||.|||..+ |+||||||+||+++.++.+||+|||++..+.....
T Consensus 84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (261)
T cd05034 84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY- 158 (261)
T ss_pred CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh-
Confidence 9999999986543 235899999999999999999999988 99999999999999999999999999987653210
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
.......++..|+|||.+.+..++.++||||||+++|+|+| |+.||..... ...+..+........+..
T Consensus 159 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05034 159 ----TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN------REVLEQVERGYRMPRPPN 228 (261)
T ss_pred ----hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCCCCCCC
Confidence 11122345678999999988889999999999999999999 9999853321 111122221112223444
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
.+..+.+++.+|+..+|.+||++. .+...|+
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~l~ 259 (261)
T cd05034 229 CPEELYDLMLQCWDKDPEERPTFE-YLQSFLE 259 (261)
T ss_pred CCHHHHHHHHHHcccCcccCCCHH-HHHHHHh
Confidence 577899999999999999999998 4655554
No 213
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.9e-35 Score=306.24 Aligned_cols=233 Identities=25% Similarity=0.447 Sum_probs=184.9
Q ss_pred eeccCCcEEEEEEEECCe------------EEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC-CceEEEE
Q 004388 410 RIGMGGYGTVYKGTFHHT------------FAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD-HGCLVYE 476 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~~------------~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~-~~~LV~E 476 (757)
.||+|+||.||+|.+.++ .+++|++...... ...|.+|+.+|++++||||++++++|.. ..++|||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 589999999999998644 3788877655433 6778999999999999999999998864 3489999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC-------ceEEeeecCc
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-------VSKIGDVGLS 549 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-------~~KL~DFGla 549 (757)
|+++|+|.+++..... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 81 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 81 YVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred cCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999876543 5889999999999999999999987 99999999999999888 7999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccC--CCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHH
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG--LISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEI 626 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ 626 (757)
...... ....++..|+|||++... .++.++|||||||++|+|++ |..||........ ...
T Consensus 156 ~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-------~~~ 218 (259)
T cd05037 156 ITVLSR----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-------ERF 218 (259)
T ss_pred cccccc----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-------HHH
Confidence 865431 223567889999998776 78999999999999999999 5777753321110 000
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 627 LDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 627 ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
.. .....+......+.+++.+||..+|.+||++.+ ++..
T Consensus 219 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~-il~~ 257 (259)
T cd05037 219 YQ-DQHRLPMPDCAELANLINQCWTYDPTKRPSFRA-ILRD 257 (259)
T ss_pred Hh-cCCCCCCCCchHHHHHHHHHhccChhhCCCHHH-HHHh
Confidence 10 112223333478999999999999999999984 4443
No 214
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6e-35 Score=315.04 Aligned_cols=194 Identities=25% Similarity=0.406 Sum_probs=156.5
Q ss_pred ceeeccCCcEEEEEEEECC----eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC----CceEEEEecC
Q 004388 408 NLRIGMGGYGTVYKGTFHH----TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD----HGCLVYEYME 479 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~----~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~----~~~LV~Ey~~ 479 (757)
..+||+|+||.||+|.... ..||+|.+.... ....+.+|+.+|++++||||+++++++.. ..++||||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3579999999999998642 579999886543 23457899999999999999999998742 2379999986
Q ss_pred CCCHHHHHhhc------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee----cCCCceEEeeecCc
Q 004388 480 NGSLEDRLYRK------NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL----DHNLVSKIGDVGLS 549 (757)
Q Consensus 480 ~gsL~~~L~~~------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl----d~~~~~KL~DFGla 549 (757)
++|.+++... .....+++..+..|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5777776422 11235888999999999999999999988 9999999999999 56789999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccc
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAI 610 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~ 610 (757)
+........ ........||+.|+|||++.+ ..++.++|||||||++|||+||++||..
T Consensus 160 ~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKP---LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCccc---ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 876543211 111234578999999998866 4589999999999999999999999963
No 215
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-35 Score=318.36 Aligned_cols=257 Identities=24% Similarity=0.398 Sum_probs=201.0
Q ss_pred cCCccceeeccCCcEEEEEEEEC---------CeEEEEEEEccCC-chhhHHHHHHHHHHHhc-CCCceeeecccccCCc
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH---------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~---------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~ 471 (757)
..|...+.||+|+||.||++... ...||+|++.... ......+.+|+.++.++ +||||++++++|.+..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 35788889999999999999752 1368999887543 23456789999999999 7999999999986654
Q ss_pred --eEEEEecCCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec
Q 004388 472 --CLVYEYMENGSLEDRLYRKN-------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD 536 (757)
Q Consensus 472 --~LV~Ey~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld 536 (757)
++||||+++|+|.+++.... ....++|..+..++.|++.||.|||..+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence 89999999999999987532 1234889999999999999999999987 99999999999999
Q ss_pred CCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhh
Q 004388 537 HNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVE 615 (757)
Q Consensus 537 ~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~ 615 (757)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYK----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred CCCcEEECCcccceecccccccc----cccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 99999999999998664322111 1122345678999999988889999999999999999998 888885332111
Q ss_pred hhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHH
Q 004388 616 TAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKE 673 (757)
Q Consensus 616 ~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~ 673 (757)
.+..+........+...+..+.+++.+||+.+|.+||++. +++..|+.+..
T Consensus 245 ------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-ell~~l~~~~~ 295 (334)
T cd05100 245 ------LFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFK-QLVEDLDRVLT 295 (334)
T ss_pred ------HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHhh
Confidence 1111112222233445677899999999999999999998 57777776654
No 216
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.8e-35 Score=308.49 Aligned_cols=240 Identities=28% Similarity=0.358 Sum_probs=195.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
+|.....||.|+||.||+|.+. +..+|+|++.... ......+.+|+.+++.++||||+++++++.+.. ++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5677788999999999999875 5689999987553 334466889999999999999999999886554 7999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++... ++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 153 (274)
T cd06609 82 GGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS- 153 (274)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccc-
Confidence 999999988643 5899999999999999999999987 99999999999999999999999999987764321
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh-
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK- 637 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~- 637 (757)
......|++.|+|||++.+..++.++|||||||++|+|+||++||...+... ....+........+..
T Consensus 154 -----~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~~~~~~~~~~~~~~~~~ 222 (274)
T cd06609 154 -----KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR------VLFLIPKNNPPSLEGNK 222 (274)
T ss_pred -----ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH------HHHHhhhcCCCCCcccc
Confidence 1234578999999999988889999999999999999999999996443211 1111111111122222
Q ss_pred HHHHHHHHHHHHhhccCCCCCccch
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..+.+++.+||..+|.+||++.+
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~ 247 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKE 247 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHH
Confidence 5678999999999999999999875
No 217
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.8e-35 Score=307.83 Aligned_cols=244 Identities=26% Similarity=0.453 Sum_probs=191.8
Q ss_pred eeccCCcEEEEEEEECC--------eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 410 RIGMGGYGTVYKGTFHH--------TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~--------~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
.||.|+||.||+|.... ..+|+|.+.... ......|.+|+.+++.++||||++++++|.+. .++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999998753 468999876443 23456789999999999999999999998654 38999999
Q ss_pred CCCCHHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC-----ceEEeeecCc
Q 004388 479 ENGSLEDRLYRKN----NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-----VSKIGDVGLS 549 (757)
Q Consensus 479 ~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-----~~KL~DFGla 549 (757)
++|+|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++ .+||+|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999987532 2234788999999999999999999987 99999999999999887 8999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
..+....... ......++..|+|||++.++.++.++|||||||++|+|+| |+.||....... ....+.
T Consensus 159 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~ 227 (269)
T cd05044 159 RDIYKSDYYR----KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-------VLQHVT 227 (269)
T ss_pred cccccccccc----cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-------HHHHHh
Confidence 7654322110 1123356788999999999999999999999999999998 999985332111 111111
Q ss_pred -hhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 629 -AQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 629 -~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
......+...+..+.+++.+||..+|.+||++.+ ++..|
T Consensus 228 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~-i~~~l 267 (269)
T cd05044 228 AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDR-IQEIL 267 (269)
T ss_pred cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHH-HHHHH
Confidence 1122334456788999999999999999999984 55554
No 218
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.6e-35 Score=310.69 Aligned_cols=247 Identities=29% Similarity=0.414 Sum_probs=194.6
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
.+|...++||+|+||.||++... +..+|+|++.... ......|.+|++++..++||||+++++++.+.. +|||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 35667788999999999999886 6789999876543 334567899999999999999999999986654 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++|+|.+++...+ ++++.....++.+++.||.|||+.. +++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred CCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 99999999876533 5899999999999999999999742 29999999999999999999999999987543221
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhh-hhch----hhHHHHhhhhcC
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVET-AIDE----DNLAEILDAQAG 632 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~----~~l~~~ld~~~~ 632 (757)
.....|+..|+|||++.++.++.++|||||||++|+|+||+.||........ .... +.+..++.....
T Consensus 159 -------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd06620 159 -------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP 231 (284)
T ss_pred -------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC
Confidence 1234789999999999888899999999999999999999999974322100 0001 111222221112
Q ss_pred CCCh-hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 633 DWPI-KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 633 ~~p~-~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+. ..+..+.+|+.+|+..+|.+||++.+
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e 262 (284)
T cd06620 232 RLPSSDFPEDLRDFVDACLLKDPTERPTPQQ 262 (284)
T ss_pred CCCchhcCHHHHHHHHHHhcCCcccCcCHHH
Confidence 2222 25678999999999999999999975
No 219
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.2e-35 Score=323.33 Aligned_cols=235 Identities=23% Similarity=0.243 Sum_probs=182.4
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhc---CCCceeeecccccCC--ceEEEEecCC
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKI---RHPHLLLLLGACPDH--GCLVYEYMEN 480 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l---~Hpniv~l~g~~~~~--~~LV~Ey~~~ 480 (757)
||+|+||.||+|... +..||||++..... .....+..|..++.++ +||||+.+++++.+. .++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999875 56999999864321 1223455677777765 699999999988654 4899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++...+ .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--- 151 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--- 151 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC---
Confidence 99999886543 4888999999999999999999988 99999999999999999999999999875432221
Q ss_pred ccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC-hhH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP-IKE 638 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p-~~~ 638 (757)
.....+||+.|+|||++.+. .++.++|||||||++|+|+||+.||......+ .+..+.. .....| ...
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~i~~-~~~~~~~~~~ 221 (330)
T cd05586 152 ---TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRNIAF-GKVRFPKNVL 221 (330)
T ss_pred ---CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHHHHc-CCCCCCCccC
Confidence 12345799999999988654 48999999999999999999999996432211 1111111 111222 235
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhh
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+..+.+++.+||..+|.+||+....+
T Consensus 222 ~~~~~~li~~~L~~~P~~R~~~~~~~ 247 (330)
T cd05586 222 SDEGRQFVKGLLNRNPQHRLGAHRDA 247 (330)
T ss_pred CHHHHHHHHHHcCCCHHHCCCCCCCH
Confidence 67889999999999999999765433
No 220
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=312.60 Aligned_cols=240 Identities=21% Similarity=0.360 Sum_probs=203.0
Q ss_pred CCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC--CceEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD--HGCLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~~~LV~Ey 477 (757)
-|...+.||+|.|+.|-++++ .|..||||++.... ......+.+|+..|+-++|||||+||.+... ..|||+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 366677899999999998865 67899999997653 3345678899999999999999999999754 45999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee-cCCCceEEeeecCccccCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL-DHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl-d~~~~~KL~DFGla~~~~~~~ 556 (757)
-++|+|.|++.+... .+.+....+++.||+.|+.|+|+.+ +|||||||+|+.+ ..-|-+||+|||++..+.++.
T Consensus 99 GD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~ 173 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK 173 (864)
T ss_pred cCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcc
Confidence 999999999987654 4888899999999999999999999 9999999999866 667999999999998776654
Q ss_pred CCccccccccCCcccccCCCccccccCCCC-CcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLIS-PKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
. -+..+|++.|-|||++.+..|+ +++||||||||||-|++|++||.-.+. .+.+..++|-. -..|
T Consensus 174 k-------L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND------SETLTmImDCK-YtvP 239 (864)
T KOG4717|consen 174 K-------LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND------SETLTMIMDCK-YTVP 239 (864)
T ss_pred h-------hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc------hhhhhhhhccc-ccCc
Confidence 3 2456999999999999988886 689999999999999999999964443 34455555532 3457
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+.+..+||..||..||++|.++.+
T Consensus 240 shvS~eCrdLI~sMLvRdPkkRAslEe 266 (864)
T KOG4717|consen 240 SHVSKECRDLIQSMLVRDPKKRASLEE 266 (864)
T ss_pred hhhhHHHHHHHHHHHhcCchhhccHHH
Confidence 778999999999999999999998764
No 221
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.8e-35 Score=303.87 Aligned_cols=241 Identities=25% Similarity=0.405 Sum_probs=196.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
++|....+||.|+||.||+|... +..+++|.+..... ...|.+|++++++++||||+++++.+.+.. +++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 56888889999999999999986 46899999875433 678999999999999999999999986554 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 81 GAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999999886533 35899999999999999999999988 99999999999999999999999999987654321
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc--CCCCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA--GDWPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~--~~~p~ 636 (757)
......|+..|+|||++.+..++.++|||||||++|+|+||++||.......... .+..... ...+.
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------~~~~~~~~~~~~~~ 223 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------MIPNKPPPTLSDPE 223 (256)
T ss_pred -----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------hhccCCCCCCCchh
Confidence 1123468899999999988889999999999999999999999996432221110 0000000 11123
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.....+.+++.+||+.+|.+||++.+
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~ 249 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQ 249 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHH
Confidence 44578999999999999999999985
No 222
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.5e-35 Score=323.24 Aligned_cols=246 Identities=18% Similarity=0.219 Sum_probs=189.6
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC-------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD------- 469 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------- 469 (757)
..++|.....||+|+||.||++... +..||||++.... ......+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4568999999999999999999875 5689999987532 2334568899999999999999999998743
Q ss_pred -CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 470 -HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 470 -~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
..|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence 23899999974 77776632 3778889999999999999999987 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch--------
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE-------- 620 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~-------- 620 (757)
++...... ......||+.|+|||++.+..++.++|||||||++|+|+||+.||............
T Consensus 173 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 173 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred ccccCCCC-------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98654321 123457899999999999889999999999999999999999999744322110000
Q ss_pred hhHHH--------Hhhhhc-------------------CCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 DNLAE--------ILDAQA-------------------GDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 ~~l~~--------~ld~~~-------------------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+.. ...... ..........+.+|+.+|+..||.+||++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 00000 000000 0001112457899999999999999999985
No 223
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.8e-35 Score=313.80 Aligned_cols=242 Identities=23% Similarity=0.343 Sum_probs=197.2
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
.+|...++||.|+||.||+|.. .+..||+|.+........+.+.+|+.+++.++||||++++++|... .++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5688889999999999999986 4679999998766555567788999999999999999999998654 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++... .+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.++|+|||++.........
T Consensus 99 ~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 99 AGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred CCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 999999988542 4788899999999999999999987 999999999999999999999999999765433211
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh--cCCCCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ--AGDWPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~--~~~~p~ 636 (757)
.....|++.|+|||++.+..++.++|+|||||++|+|+||++||.......... ...... ....|.
T Consensus 172 ------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~~~~~~~~~ 239 (297)
T cd06656 172 ------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGTPELQNPE 239 (297)
T ss_pred ------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCCCCCCCCcc
Confidence 123468999999999988889999999999999999999999996443221111 000000 112234
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
..+..+.+++.+||..+|.+||++.++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~i 266 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKEL 266 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 456778999999999999999999853
No 224
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-34 Score=299.95 Aligned_cols=256 Identities=29% Similarity=0.421 Sum_probs=201.0
Q ss_pred hcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchh-------hHHHHHHHHHHHhcCCCceeeeccccc---C
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQ-------NKQFLQELEVLSKIRHPHLLLLLGACP---D 469 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~-------~~~f~~Ev~il~~l~Hpniv~l~g~~~---~ 469 (757)
...|-....||+|||+.||++.+ .+++||||+-....... .+...+|..|.+.|+||.||++|++|. +
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 34466667899999999999986 46799999976443221 234578999999999999999999983 4
Q ss_pred CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC---CCceEEeee
Q 004388 470 HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH---NLVSKIGDV 546 (757)
Q Consensus 470 ~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~---~~~~KL~DF 546 (757)
..|-|+|||+|.+|+-+|.... .++..+...|+.||+.||.||...+ .||||-||||.||||-. -|.+||+||
T Consensus 542 sFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred cceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeec
Confidence 5599999999999998887644 3889999999999999999999988 58999999999999954 488999999
Q ss_pred cCccccCCCCCC-ccccccccCCcccccCCCccccccC----CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchh
Q 004388 547 GLSTMLNSDPSF-VSTTYKNTGPVGTLCYIDPEYQRTG----LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDED 621 (757)
Q Consensus 547 Gla~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~ 621 (757)
||++++.++... ..........+||.+|++||++.-+ +.+.++||||+|||+|++|.|+.||+....-...+...
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 999998765422 1122223456899999999987654 47889999999999999999999998665544444444
Q ss_pred hHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 622 NLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 622 ~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+........+..| ..+.+...+|.+||++..++|.+..+
T Consensus 698 TIlkAtEVqFP~KP-vVsseAkaFIRRCLaYRKeDR~DV~q 737 (775)
T KOG1151|consen 698 TILKATEVQFPPKP-VVSSEAKAFIRRCLAYRKEDRIDVQQ 737 (775)
T ss_pred chhcceeccCCCCC-ccCHHHHHHHHHHHHhhhhhhhhHHH
Confidence 44333322222222 45788999999999999999988764
No 225
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.3e-35 Score=323.12 Aligned_cols=247 Identities=19% Similarity=0.219 Sum_probs=190.0
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC-------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD------- 469 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------- 469 (757)
...+|...+.||+|+||.||++... +..||||++.... ......+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999875 5689999986542 2334567899999999999999999998742
Q ss_pred -CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 470 -HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 470 -~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence 23899999975 67666632 3788888999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc---------
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID--------- 619 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~--------- 619 (757)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 166 ~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 166 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred cccCCCcc-------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 98654321 12345789999999999888899999999999999999999999964332111000
Q ss_pred -------hhhHHHHhhhhc-------------------CCCChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 620 -------EDNLAEILDAQA-------------------GDWPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 620 -------~~~l~~~ld~~~-------------------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
...+...++... ...+...+..+.+|+.+|+..+|.+||++.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~el 308 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEA 308 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHH
Confidence 000001110000 00111234678999999999999999999853
No 226
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=321.85 Aligned_cols=250 Identities=28% Similarity=0.473 Sum_probs=207.7
Q ss_pred CCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYME 479 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~ 479 (757)
+.....+||.|-||.||.|.|+. -.||||.++.+.. ..++|+.|..+|+.|+|||+|+|+|+|.... |||.|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 45566789999999999999975 4899999987654 4678999999999999999999999996543 89999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.|+|.+... ..++....+.++.||.+|+.||...+ +|||||-..|.|+..+..+||+||||++++..+.-
T Consensus 347 yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTY-- 420 (1157)
T KOG4278|consen 347 YGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTY-- 420 (1157)
T ss_pred CccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCce--
Confidence 9999999986543 35777788899999999999999988 99999999999999999999999999999875421
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChh
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIK 637 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~ 637 (757)
+ ...+..-...|.|||-+....++.|+|||+|||+|||+.| |..||... +......+|... ..+.|..
T Consensus 421 -T--AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-------dlSqVY~LLEkgyRM~~PeG 490 (1157)
T KOG4278|consen 421 -T--AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQVYGLLEKGYRMDGPEG 490 (1157)
T ss_pred -e--cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-------cHHHHHHHHhccccccCCCC
Confidence 0 1123344677999999999999999999999999999997 78888533 233344455443 3566788
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
+++.+.+|+..||+.+|.+||++. ++-..++.+
T Consensus 491 CPpkVYeLMraCW~WsPsDRPsFa-eiHqafEtm 523 (1157)
T KOG4278|consen 491 CPPKVYELMRACWNWSPSDRPSFA-EIHQAFETM 523 (1157)
T ss_pred CCHHHHHHHHHHhcCCcccCccHH-HHHHHHHHH
Confidence 999999999999999999999998 466666554
No 227
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.2e-35 Score=316.67 Aligned_cols=248 Identities=19% Similarity=0.306 Sum_probs=188.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey 477 (757)
.+|....+||+|+||.||+|... +..||+|.+..... .....+.+|+.++++++||||+++++++.+. .++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 45788889999999999999875 45899999875432 2334678899999999999999999998644 4899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++ +|.+++...+ ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 974 8888776543 34788899999999999999999988 99999999999999999999999999976543221
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc---------hhhHHHH-
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID---------EDNLAEI- 626 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~---------~~~l~~~- 626 (757)
......+|+.|+|||++.+ ..++.++|||||||++|+|+||++||......+.... ...+..+
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 160 ------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred ------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 1123468999999998754 4688999999999999999999999964332111000 0000000
Q ss_pred -----hhhhcCC--------CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 627 -----LDAQAGD--------WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 627 -----ld~~~~~--------~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..... .....+..+.+|+.+|+..+|.+||++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 282 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEE 282 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHH
Confidence 0000000 01124567899999999999999999875
No 228
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.9e-35 Score=327.19 Aligned_cols=244 Identities=23% Similarity=0.316 Sum_probs=187.1
Q ss_pred cCCccceeeccCCcEEEEEEEECC----eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH----TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~----~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~E 476 (757)
..|....+||.|+||.||++...+ ..||+|.+... ..+.+|+.+|++++||||+++++++... .|+|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 358888999999999999997643 47888887543 2356899999999999999999988654 489999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+. ++|.+++... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 167 ~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 167 KYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 995 6888888432 35899999999999999999999988 9999999999999999999999999997665432
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhh--hh--------------ch
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVET--AI--------------DE 620 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~--~~--------------~~ 620 (757)
.. .......||+.|+|||++.+..++.++|||||||+||||++|+.||........ .+ ..
T Consensus 240 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 240 DT----PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred cc----ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 11 112345799999999999988999999999999999999999999853221100 00 00
Q ss_pred ---hhHHHHhhhh----cCCCC-------hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 ---DNLAEILDAQ----AGDWP-------IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 ---~~l~~~ld~~----~~~~p-------~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+...+... ...++ ......+.+++.+||..+|.+||++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e 371 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQD 371 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHH
Confidence 0000000000 01111 123467889999999999999999986
No 229
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.1e-34 Score=309.67 Aligned_cols=243 Identities=24% Similarity=0.383 Sum_probs=193.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
..|....+||.|+||.||+|... +..+++|++..........+.+|+.+++.++||||+++++.+.... ++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45777889999999999999885 4689999987766556677899999999999999999999875443 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|..++.... ..+++..+..++.|++.||.|||..+ |+||||||+|||++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-- 164 (292)
T cd06644 92 PGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-- 164 (292)
T ss_pred CCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc--
Confidence 9999988775543 34899999999999999999999987 9999999999999999999999999987543221
Q ss_pred ccccccccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcC-
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAG- 632 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~- 632 (757)
.......+++.|+|||++. ...++.++|||||||++|+|+||.+||........ +..+......
T Consensus 165 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~~~ 234 (292)
T cd06644 165 ----QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKSEPPT 234 (292)
T ss_pred ----cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH------HHHHhcCCCcc
Confidence 1123456889999999874 34578899999999999999999999964432211 1111111111
Q ss_pred -CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 633 -DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 633 -~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+...+..+.+++.+||..+|.+||++.+
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 265 (292)
T cd06644 235 LSQPSKWSMEFRDFLKTALDKHPETRPSAAQ 265 (292)
T ss_pred CCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence 112345578999999999999999999875
No 230
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-36 Score=326.64 Aligned_cols=240 Identities=27% Similarity=0.392 Sum_probs=195.9
Q ss_pred eeeccCCcEEEEEEEECCe--EEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCce--EEEEecCCCCHH
Q 004388 409 LRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHGC--LVYEYMENGSLE 484 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~~--LV~Ey~~~gsL~ 484 (757)
.+||+|.||+||-|++.++ ..|||-+........+-+..||.+.++|+|.|||+++|.|.++++ +.||-++||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 4699999999999999876 568888876666566668899999999999999999999988885 689999999999
Q ss_pred HHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec-CCCceEEeeecCccccCCCCCCccc
Q 004388 485 DRLYRKNNTPPI--PWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD-HNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 485 ~~L~~~~~~~~l--~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld-~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
++|..+= .|+ .+.+.-.+..||+.||.|||.++ |||||||-+|+|++ -.|.+||+|||-++.+..-..
T Consensus 661 sLLrskW--GPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP---- 731 (1226)
T KOG4279|consen 661 SLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP---- 731 (1226)
T ss_pred HHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCCc----
Confidence 9886532 345 67778888999999999999999 99999999999996 579999999999987764332
Q ss_pred cccccCCcccccCCCccccccC--CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh-hhhcCCCChhH
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTG--LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL-DAQAGDWPIKE 638 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l-d~~~~~~p~~~ 638 (757)
....+.||..|||||++..| .|+.++|||||||++.||.||+|||.-......++ .++= -..-+..|...
T Consensus 732 --~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM-----FkVGmyKvHP~iPeel 804 (1226)
T KOG4279|consen 732 --CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM-----FKVGMYKVHPPIPEEL 804 (1226)
T ss_pred --cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh-----hhhcceecCCCCcHHH
Confidence 12346899999999998766 48999999999999999999999995322222211 1110 01124567788
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhh
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+.+...+|++|++.+|.+||++.+.+
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL 830 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLL 830 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhc
Confidence 99999999999999999999998643
No 231
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1e-34 Score=306.56 Aligned_cols=250 Identities=24% Similarity=0.414 Sum_probs=197.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC-------CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCC--ce
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-------HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDH--GC 472 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-------~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~ 472 (757)
.+|.....||.|+||.||+|+.. ...+++|.+...... ....|.+|+.++++++||||++++++|.+. .+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46778889999999999999864 347899988654433 456799999999999999999999998764 48
Q ss_pred EEEEecCCCCHHHHHhhcCCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeee
Q 004388 473 LVYEYMENGSLEDRLYRKNNT------PPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDV 546 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~------~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DF 546 (757)
+||||+++|+|.+++...... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998755422 25899999999999999999999988 999999999999999999999999
Q ss_pred cCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHH
Q 004388 547 GLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 547 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
|++....... .+......+++.|++||.+.++.++.++||||||+++|+|++ |..||..... ..+..
T Consensus 162 ~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-------~~~~~ 229 (275)
T cd05046 162 SLSKDVYNSE-----YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-------EEVLN 229 (275)
T ss_pred ccccccCccc-----ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-------HHHHH
Confidence 9987543221 112233467888999999888888999999999999999999 7888853211 11111
Q ss_pred HhhhhcCCC--ChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 626 ILDAQAGDW--PIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 626 ~ld~~~~~~--p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.+......| +...+..+.+++.+||..+|.+||++.+ ++..|
T Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~-~l~~l 273 (275)
T cd05046 230 RLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSE-LVSAL 273 (275)
T ss_pred HHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH-HHHHh
Confidence 111111112 3345678999999999999999999984 54444
No 232
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.3e-34 Score=304.63 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=192.0
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-----chhhHHHHHHHHHHHhcCCCceeeecccccCC----c
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-----NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----G 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-----~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~ 471 (757)
.+|.....||+|+||.||+|... +..|++|.+.... ......+.+|+.++++++||||+++++++.+. .
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999874 5689999876432 12335688899999999999999999987542 3
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
+++|||+++++|.+++.... .+++.....++.|++.||.|||..+ |+||||||+||+++.++.+||+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 78999999999999886543 4788899999999999999999987 99999999999999999999999999976
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh-hh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD-AQ 630 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld-~~ 630 (757)
+....... .......++..|+|||++.+..++.++|||||||++|+|+||++||........ +..... ..
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~~~~~~ 226 (266)
T cd06651 156 LQTICMSG---TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKIATQPT 226 (266)
T ss_pred cccccccC---CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHHhcCCC
Confidence 54321110 011234689999999999888899999999999999999999999964322211 111111 11
Q ss_pred cCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 631 AGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 631 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....|......+..++ +||..+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~e 257 (266)
T cd06651 227 NPQLPSHISEHARDFL-GCIFVEARHRPSAEE 257 (266)
T ss_pred CCCCchhcCHHHHHHH-HHhcCChhhCcCHHH
Confidence 2333445567778887 788899999999985
No 233
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=320.95 Aligned_cols=241 Identities=24% Similarity=0.348 Sum_probs=202.7
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHHHHhcC-CCceeeecccccCCc--e
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEVLSKIR-HPHLLLLLGACPDHG--C 472 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~--~ 472 (757)
....|.....||.|.||.||+++.. +..+|+|++...... ....+.+|+.||+++. |||||.++++|.+.. +
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3446777889999999999999986 458999998766443 3457899999999998 999999999997665 8
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC----CCceEEeeecC
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH----NLVSKIGDVGL 548 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~----~~~~KL~DFGl 548 (757)
+|||++.||.|.+.+... .++......++.||+.++.|||+.+ |+||||||+|+|+.. ++.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999876 2889999999999999999999988 999999999999953 35899999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
+...... ......+||+.|+|||++....|+..+||||+||++|.|++|.+||......... ..++.
T Consensus 186 a~~~~~~-------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~------~~i~~ 252 (382)
T KOG0032|consen 186 AKFIKPG-------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF------LAILR 252 (382)
T ss_pred ceEccCC-------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH------HHHHc
Confidence 9987652 2335679999999999999999999999999999999999999999755433222 12222
Q ss_pred ----hhcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 ----AQAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 ----~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.....|+. .+..+.+++..|+..||..|+++.+
T Consensus 253 ~~~~f~~~~w~~-is~~akd~i~~ll~~dp~~R~ta~~ 289 (382)
T KOG0032|consen 253 GDFDFTSEPWDD-ISESAKDFIRKLLEFDPRKRLTAAQ 289 (382)
T ss_pred CCCCCCCCCccc-cCHHHHHHHHHhcccCcccCCCHHH
Confidence 22344553 5889999999999999999999985
No 234
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.2e-35 Score=309.32 Aligned_cols=235 Identities=23% Similarity=0.380 Sum_probs=184.9
Q ss_pred eeccCCcEEEEEEEECC---------eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC--CceEEEEec
Q 004388 410 RIGMGGYGTVYKGTFHH---------TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD--HGCLVYEYM 478 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~---------~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~~~LV~Ey~ 478 (757)
.||.|+||.||+|.... ..+++|.+........+.|.+|+.+++.+.||||+++++++.. ..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 58999999999997642 2488888765544555678999999999999999999999864 448999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc--------eEEeeecCcc
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV--------SKIGDVGLST 550 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~--------~KL~DFGla~ 550 (757)
++|+|.+++...+. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. ++++|||++.
T Consensus 82 ~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 82 KFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999875443 5889999999999999999999987 999999999999987765 6999999986
Q ss_pred ccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCC-CCccccchhhhhhchhhHHHHhh
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAK-PAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~-~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
..... ....+++.|+|||++.+ ..++.++|||||||++|+|++|. +||........ .....
T Consensus 157 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-------~~~~~ 219 (258)
T cd05078 157 TVLPK----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-------LQFYE 219 (258)
T ss_pred ccCCc----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-------HHHHH
Confidence 54321 22467889999998876 45799999999999999999995 66643222111 11111
Q ss_pred hhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 629 AQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 629 ~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
.....|......+.+|+.+||+.+|.+||++.+ ++..|
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~-il~~l 257 (258)
T cd05078 220 -DRHQLPAPKWTELANLINQCMDYEPDFRPSFRA-IIRDL 257 (258)
T ss_pred -ccccCCCCCcHHHHHHHHHHhccChhhCCCHHH-HHHhc
Confidence 122334445578999999999999999999985 54443
No 235
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.5e-35 Score=305.70 Aligned_cols=245 Identities=31% Similarity=0.483 Sum_probs=191.7
Q ss_pred CccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhH--HHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNK--QFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~--~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
|...+.||+|+||.||++...+ ..+|+|++......... ...+|+.++.+++||||+++++++.+.. ++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4567889999999999999865 47999999876544332 3456999999999999999999986543 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~-- 152 (260)
T PF00069_consen 81 PGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSENN-- 152 (260)
T ss_dssp TTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTSTT--
T ss_pred cccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--
Confidence 999999999733 34899999999999999999999988 9999999999999999999999999997642111
Q ss_pred ccccccccCCcccccCCCccccc-cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh-hchhhHHHHhhhhcCCCCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQR-TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA-IDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~l~~~ld~~~~~~p~ 636 (757)
.......+|+.|+|||++. +..++.++||||||+++|+|++|..||......... .-.......+.... ....
T Consensus 153 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 227 (260)
T PF00069_consen 153 ----ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS-QQSR 227 (260)
T ss_dssp ----SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT-TSHT
T ss_pred ----cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc-cccc
Confidence 1123457899999999988 788999999999999999999999999754111110 00011111111111 1111
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.....+.+++.+||+.+|.+||++.+
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~ 253 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEE 253 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHH
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHH
Confidence 12489999999999999999999885
No 236
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.5e-35 Score=318.22 Aligned_cols=245 Identities=20% Similarity=0.285 Sum_probs=188.0
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC-------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD------- 469 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------- 469 (757)
..++|.....||.|+||.||+|... +..||||++.... ......+.+|+.+|++++||||+++++++..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3467888889999999999999875 4589999986532 2234567889999999999999999998742
Q ss_pred -CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 470 -HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 470 -~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
..+++++++ +++|.+++.. ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 237899988 7899887743 24889999999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh---------
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI--------- 618 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~--------- 618 (757)
++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..........
T Consensus 165 ~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd07878 165 ARQADDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTP 235 (343)
T ss_pred ceecCCC---------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9865432 134578999999998866 568999999999999999999999996433211100
Q ss_pred --------chhhHHHHhhhhcCCCCh--------hHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 619 --------DEDNLAEILDAQAGDWPI--------KETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 619 --------~~~~l~~~ld~~~~~~p~--------~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
........+.. ....+. ...+.+.+|+.+|+..+|.+||++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~el 295 (343)
T cd07878 236 SPEVLKKISSEHARKYIQS-LPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEA 295 (343)
T ss_pred CHHHHHhcchhhHHHHhhc-cccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 00000000000 011111 123457899999999999999998853
No 237
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.6e-35 Score=309.10 Aligned_cols=244 Identities=26% Similarity=0.410 Sum_probs=196.5
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
++|....+||.|+||.||+|.+. +..+|+|++..........|.+|+.++++++||||+++++++.+.. ++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 45777888999999999999885 5689999987766556678999999999999999999999986544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 85 DGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred CCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhccccc-
Confidence 9999999886543 35899999999999999999999988 99999999999999999999999999876543211
Q ss_pred ccccccccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc--
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA-- 631 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~-- 631 (757)
......||+.|++||++. ...++.++|||||||++|+|++|++||........ +..+.....
T Consensus 159 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~ 227 (280)
T cd06611 159 -----KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV------LLKILKSEPPT 227 (280)
T ss_pred -----ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH------HHHHhcCCCCC
Confidence 123457899999999864 34577899999999999999999999964432211 111111111
Q ss_pred CCCChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 632 GDWPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 632 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
...|...+..+.+++.+||..+|.+||++.++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 259 (280)
T cd06611 228 LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAEL 259 (280)
T ss_pred cCCcccCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 11233456789999999999999999999853
No 238
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.2e-35 Score=308.51 Aligned_cols=241 Identities=26% Similarity=0.380 Sum_probs=193.7
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecC
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYME 479 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~ 479 (757)
|+....||.|+||.||+|.+. +..||+|.+.... ......+.+|+.++++++||||+++++++.+. .++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 455567999999999999874 5689999987543 33445788999999999999999999998654 489999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+++|.+++.. ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..+.....
T Consensus 86 ~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06642 86 GGSALDLLKP----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch--
Confidence 9999998743 34889999999999999999999987 99999999999999999999999999976653221
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......|+..|+|||++.+..++.++|||||||++|+|+||+.||........ ...+........+...+
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~ 226 (277)
T cd06642 157 ----KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV------LFLIPKNSPPTLEGQYS 226 (277)
T ss_pred ----hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH------HhhhhcCCCCCCCcccC
Confidence 12234689999999999888899999999999999999999999863322111 11111111222334567
Q ss_pred HHHHHHHHHHhhccCCCCCccchhh
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+.+++.+||..+|.+||++.+++
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELL 251 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHH
Confidence 7899999999999999999998654
No 239
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.7e-34 Score=299.90 Aligned_cols=243 Identities=25% Similarity=0.359 Sum_probs=196.5
Q ss_pred CCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|+..+.||.|+||.||.+.. .+..+++|.+.... ......+.+|+.++++++||||+++++++.+.. ++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477888999999998888776 45689999876542 344567889999999999999999999987655 789999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999887643 345889999999999999999999988 99999999999999999999999999987654321
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
......|++.|+|||++.+..++.++||||||+++|+|++|..||......+ ....+........+..
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 224 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIVQGNYTPVVSV 224 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCccc
Confidence 1234578999999999988888999999999999999999999996432211 1112222112222334
Q ss_pred HHHHHHHHHHHHhhccCCCCCccch
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..+.+++.+||..+|.+||++.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ 249 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADE 249 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHH
Confidence 5678999999999999999999885
No 240
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.7e-34 Score=301.41 Aligned_cols=246 Identities=26% Similarity=0.458 Sum_probs=194.2
Q ss_pred CCccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
.|+....||.|+||.||+|.+. +..+|+|.+.... .....|.+|++++++++|||++++++++.+.. ++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 5677788999999999999875 6789999876443 23457899999999999999999999986543 899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 84 ~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--- 155 (256)
T cd05112 84 GCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--- 155 (256)
T ss_pred CcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc---
Confidence 99999886543 35889999999999999999999988 99999999999999999999999999976543211
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
.......++..|+|||++.++.++.++||||||+++|+|++ |+.||....... .+..+........|...+
T Consensus 156 --~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~ 227 (256)
T cd05112 156 --TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE------VVETINAGFRLYKPRLAS 227 (256)
T ss_pred --cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH------HHHHHhCCCCCCCCCCCC
Confidence 01123345678999999988889999999999999999998 999986332111 111111111111233356
Q ss_pred HHHHHHHHHHhhccCCCCCccchhhhhH
Q 004388 640 KELAALGLSCAELRRKDRPDLKNQVLPV 667 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~~vl~~ 667 (757)
..+.+|+.+||..+|.+||++.+ ++..
T Consensus 228 ~~~~~l~~~~l~~~p~~Rp~~~~-~l~~ 254 (256)
T cd05112 228 QSVYELMQHCWKERPEDRPSFSL-LLHQ 254 (256)
T ss_pred HHHHHHHHHHcccChhhCCCHHH-HHHh
Confidence 78999999999999999999984 4443
No 241
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.5e-35 Score=308.98 Aligned_cols=253 Identities=25% Similarity=0.331 Sum_probs=197.3
Q ss_pred HHHHHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeeccccc---
Q 004388 395 WEEIESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACP--- 468 (757)
Q Consensus 395 ~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~--- 468 (757)
++.+..++++|.....||+|+||.||+|... ++.+|+|++..... ....+.+|+.++..+ +||||++++++|.
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3455667889999999999999999999874 56899998765322 345688899999999 6999999999873
Q ss_pred ----CCceEEEEecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEE
Q 004388 469 ----DHGCLVYEYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKI 543 (757)
Q Consensus 469 ----~~~~LV~Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL 543 (757)
+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEE
Confidence 1248999999999999987642 22345888899999999999999999987 999999999999999999999
Q ss_pred eeecCccccCCCCCCccccccccCCcccccCCCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh
Q 004388 544 GDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-----GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI 618 (757)
Q Consensus 544 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~ 618 (757)
+|||++..+..... ......|++.|+|||++.. ..++.++|||||||++|+|+||+.||...+......
T Consensus 166 ~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 166 VDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred ccCCceeecccCCC------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 99999986643211 1233478999999998753 457889999999999999999999986443222111
Q ss_pred chhhHHHHhhhhc--CCCChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 619 DEDNLAEILDAQA--GDWPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 619 ~~~~l~~~ld~~~--~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
....... ...|...+..+.+++.+||+.+|.+||++.++
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el 280 (286)
T cd06638 240 ------KIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDL 280 (286)
T ss_pred ------hccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHH
Confidence 1111000 01122345679999999999999999999853
No 242
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.1e-34 Score=301.42 Aligned_cols=244 Identities=22% Similarity=0.274 Sum_probs=193.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-----chhhHHHHHHHHHHHhcCCCceeeecccccCC----c
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-----NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----G 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-----~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~ 471 (757)
.+|.....||+|+||.||+|... +..||||.+.... ......+.+|+.++++++||||+++++++.+. .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999875 5689999875432 12345688899999999999999999988653 3
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||+++|+|.+++.+.. .+++.....++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence 68999999999999886543 3788888999999999999999988 99999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHH-hhhh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEI-LDAQ 630 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~-ld~~ 630 (757)
....... ........|+..|+|||++.+..++.++|||||||++|+|++|+.||........ +... ....
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~ 226 (265)
T cd06652 156 LQTICLS---GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA------IFKIATQPT 226 (265)
T ss_pred ccccccc---ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH------HHHHhcCCC
Confidence 5432110 0011334689999999998888899999999999999999999999964322211 1111 1112
Q ss_pred cCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 631 AGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 631 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....|......+.+++.+|+. +|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~ 257 (265)
T cd06652 227 NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADE 257 (265)
T ss_pred CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHH
Confidence 233455667788999999994 9999999875
No 243
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2e-34 Score=301.08 Aligned_cols=247 Identities=27% Similarity=0.400 Sum_probs=196.9
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC--C--ceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD--H--GCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~--~~LV~ 475 (757)
+|.....||.|+||.||++... +..+|+|++.... ....+.+..|+.++++++||||+++++++.. . .+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4667788999999999999874 4689999886532 3345568899999999999999999997743 2 37999
Q ss_pred EecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 476 EYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTK--PKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~--~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
||+++++|.+++... ....++++..+..++.+|+.||.|||..+ ..+|+||||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998653 22346899999999999999999999331 234999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcC
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAG 632 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~ 632 (757)
...... .....|++.|++||++.+..++.++|+||||+++|+|++|+.||...... .....+......
T Consensus 161 ~~~~~~------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~ 228 (265)
T cd08217 161 GHDSSF------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL------QLASKIKEGKFR 228 (265)
T ss_pred cCCccc------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH------HHHHHHhcCCCC
Confidence 543211 12347899999999998888999999999999999999999999744311 111112222223
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+...+..+.+++.+|+..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 258 (265)
T cd08217 229 RIPYRYSSELNEVIKSMLNVDPDKRPSTEE 258 (265)
T ss_pred CCccccCHHHHHHHHHHccCCcccCCCHHH
Confidence 445567789999999999999999999985
No 244
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.4e-34 Score=301.60 Aligned_cols=249 Identities=26% Similarity=0.449 Sum_probs=197.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc-eEEEEecCC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG-CLVYEYMEN 480 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-~LV~Ey~~~ 480 (757)
..|...++||+|+||.||+|.+. +..+|+|.+.... .....|.+|+.++++++||||+++++.+.+.. +++|||+++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK 84 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCC
Confidence 46778889999999999999865 4579999876542 24567899999999999999999999887644 899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++.... ...+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++.........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 158 (260)
T cd05073 85 GSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-- 158 (260)
T ss_pred CcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc--
Confidence 99999987643 345888999999999999999999987 999999999999999999999999999766432211
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKE 638 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~ 638 (757)
......++..|+|||++..+.++.++|+|||||++|+|+| |+.||....... +...+... ....+...
T Consensus 159 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~ 228 (260)
T cd05073 159 ---AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALERGYRMPRPENC 228 (260)
T ss_pred ---cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhCCCCCCCcccC
Confidence 1123356678999999988889999999999999999999 999996432211 11111111 11223345
Q ss_pred HHHHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 639 TKELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+..+.+++.+|+..+|.+||++. .+...|+
T Consensus 229 ~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~L~ 258 (260)
T cd05073 229 PEELYNIMMRCWKNRPEERPTFE-YIQSVLD 258 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCHH-HHHHHHh
Confidence 67899999999999999999998 4666664
No 245
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2e-34 Score=300.11 Aligned_cols=242 Identities=30% Similarity=0.513 Sum_probs=194.8
Q ss_pred ccceeeccCCcEEEEEEEECC------eEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 406 SENLRIGMGGYGTVYKGTFHH------TFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~~------~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+....||.|+||.||++.+.. ..+|+|++...... ....+.+|+.++..++||||+++++++.+.. +++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 455689999999999999865 67999999766443 5678999999999999999999999987644 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 82 YMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred ccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999865432 12899999999999999999999987 9999999999999999999999999998766442
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
.. ......+++.|+|||.+.+..++.++||||||+++++|++ |.+||...... ..+..+........+
T Consensus 158 ~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~ 226 (258)
T smart00219 158 YY-----KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE------EVLEYLKKGYRLPKP 226 (258)
T ss_pred cc-----ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHhcCCCCCCC
Confidence 21 1112347889999999988889999999999999999998 88888642111 111111111122234
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+.+++.+|+..+|.+||++.+
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 253 (258)
T smart00219 227 ENCPPEIYKLMLQCWAEDPEDRPTFSE 253 (258)
T ss_pred CcCCHHHHHHHHHHCcCChhhCcCHHH
Confidence 446788999999999999999999985
No 246
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.3e-34 Score=303.39 Aligned_cols=253 Identities=21% Similarity=0.373 Sum_probs=195.1
Q ss_pred CccceeeccCCcEEEEEEEEC-----CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC-------
Q 004388 405 FSENLRIGMGGYGTVYKGTFH-----HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH------- 470 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~-----~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~------- 470 (757)
|...+.||+|+||.||+|.+. +..+|||++.... ....+++.+|+.++++++||||+++++++...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 455678999999999999863 4589999987543 33456788999999999999999999987431
Q ss_pred -ceEEEEecCCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeee
Q 004388 471 -GCLVYEYMENGSLEDRLYRKN---NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDV 546 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DF 546 (757)
.+++++|+.+|+|.+++.... ....+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 268899999999998875322 2224788899999999999999999987 999999999999999999999999
Q ss_pred cCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHH
Q 004388 547 GLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 547 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
|+++......... ......+++.|++||.+....++.++|||||||++|+|++ |++||....... ....
T Consensus 158 g~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~------~~~~ 227 (273)
T cd05074 158 GLSKKIYSGDYYR----QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE------IYNY 227 (273)
T ss_pred cccccccCCccee----cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH------HHHH
Confidence 9998664322111 1123345678999999988889999999999999999999 889986332211 1111
Q ss_pred HhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 626 ILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 626 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
+........+...+..+.+++.+||..+|.+||++. +++..|+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~-~~~~~l~~~ 272 (273)
T cd05074 228 LIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQ-HLRDQLELI 272 (273)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHhh
Confidence 111111223345667899999999999999999998 466666543
No 247
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=295.14 Aligned_cols=243 Identities=24% Similarity=0.358 Sum_probs=195.7
Q ss_pred hcCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCc-----h---hhHHHHHHHHHHHhc-CCCceeeecccccCC
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGN-----I---QNKQFLQELEVLSKI-RHPHLLLLLGACPDH 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~-----~---~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~ 470 (757)
..+|.....||+|+.+.|.++..+. ..+|+|++..... . ..+.-.+|+.||+++ .||||+.+.+++...
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3456667789999999999988764 4788888754321 1 224457899999998 599999999999766
Q ss_pred c--eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 471 G--CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 471 ~--~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
. ++|+|.|+.|.|.|+|...- .++.....+|+.|+..|+.|||..+ ||||||||+|||+|+|..+||+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccce
Confidence 5 78999999999999997654 4889999999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCcccccc------CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhh
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT------GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDN 622 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 622 (757)
|+.+..+.. -...||||+|+|||.+.. ..|+..+|+|++|||+|.||.|.+||...... .
T Consensus 170 a~~l~~Gek-------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm-------l 235 (411)
T KOG0599|consen 170 ACQLEPGEK-------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM-------L 235 (411)
T ss_pred eeccCCchh-------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH-------H
Confidence 998876543 356799999999997643 35888999999999999999999999632211 1
Q ss_pred HHHHhhh-----hcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhh
Q 004388 623 LAEILDA-----QAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVL 665 (757)
Q Consensus 623 l~~~ld~-----~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl 665 (757)
+..++.. ..+.|. +.+...++||.+||+.||.+|.+..+.+.
T Consensus 236 MLR~ImeGkyqF~speWa-dis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 236 MLRMIMEGKYQFRSPEWA-DISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHhcccccCCcchh-hccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1222222 123343 56788999999999999999999986543
No 248
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.9e-34 Score=304.10 Aligned_cols=241 Identities=25% Similarity=0.386 Sum_probs=195.3
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
.|+...+||.|+||.||+|.+. +..||+|++.... ......+.+|+.+++.++||||+++++++.+.. ++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4666778999999999999874 5689999987543 334567889999999999999999999987554 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|.+++.. .++++.....++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06640 85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-
Confidence 99999998853 24788899999999999999999987 99999999999999999999999999976643221
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh-hhcCCCChh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD-AQAGDWPIK 637 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~~p~~ 637 (757)
......++..|+|||++.+..++.++|+|||||++|+|+||++||........ ...+. ......+..
T Consensus 157 -----~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~ 224 (277)
T cd06640 157 -----KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-------LFLIPKNNPPTLTGE 224 (277)
T ss_pred -----ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-------hhhhhcCCCCCCchh
Confidence 12334688999999999888899999999999999999999999964322111 11111 111223345
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.+..+.+++.+||..+|.+||++.+.+
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPTAKELL 251 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcCHHHHH
Confidence 678899999999999999999998643
No 249
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-34 Score=328.07 Aligned_cols=245 Identities=22% Similarity=0.287 Sum_probs=186.7
Q ss_pred hcCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEe
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEY 477 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey 477 (757)
..+|.....||.|+||.||++.+.+ ..||||... ...+.+|+.+|++|+|||||++++++... .+|||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4578888999999999999999864 579999532 23467899999999999999999987544 3899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+. ++|.+++.... ..++|..+..|+.||+.||.|||+.+ ||||||||+||||+.++.+||+|||+++.+.....
T Consensus 242 ~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 YR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 95 78888876533 35999999999999999999999988 99999999999999999999999999987643221
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccc-hhhhhhchhhHHHHhhhh------
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITH-KVETAIDEDNLAEILDAQ------ 630 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~-~~~~~~~~~~l~~~ld~~------ 630 (757)
. .......||+.|+|||++.+..++.++|||||||+||||++|..|+.... ..........+..++...
T Consensus 316 ~----~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 316 T----PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred c----ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 1 11134579999999999998899999999999999999999886553211 000000000111111100
Q ss_pred --------------------------cCCCCh--hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 631 --------------------------AGDWPI--KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 631 --------------------------~~~~p~--~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...|.. .....+.+|+.+||+.||.+||++.+
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~e 451 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAE 451 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHH
Confidence 001111 22357889999999999999999985
No 250
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.3e-34 Score=306.81 Aligned_cols=255 Identities=27% Similarity=0.341 Sum_probs=200.7
Q ss_pred CCCHHHHHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeeccccc
Q 004388 392 NLTWEEIESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACP 468 (757)
Q Consensus 392 ~~~~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~ 468 (757)
.++..++..++++|.....||.|+||.||++... +..+|+|++.... .....+.+|+.++.++ +|||+++++++|.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3556677788999999999999999999999884 5689999986542 2345678899999999 7999999999874
Q ss_pred C-------CceEEEEecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 469 D-------HGCLVYEYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 469 ~-------~~~LV~Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
. ..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCC
Confidence 2 248999999999999988642 22345899999999999999999999987 999999999999999999
Q ss_pred eEEeeecCccccCCCCCCccccccccCCcccccCCCccccccC-----CCCCcchhhhHHHHHHHHHhCCCCccccchhh
Q 004388 541 SKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-----LISPKSDVYAYGMVILQLLTAKPAIAITHKVE 615 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~ 615 (757)
+||+|||++........ ......|+..|+|||++..+ .++.++|||||||++|+|++|++||.......
T Consensus 167 ~kl~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~ 240 (291)
T cd06639 167 VKLVDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK 240 (291)
T ss_pred EEEeecccchhcccccc------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence 99999999986543221 11234689999999987543 36889999999999999999999996443221
Q ss_pred hhhchhhHHHHhhhhcC--CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 616 TAIDEDNLAEILDAQAG--DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 616 ~~~~~~~l~~~ld~~~~--~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. +..+...... ..+......+.+++.+||+.+|.+||++.+
T Consensus 241 ~------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 283 (291)
T cd06639 241 T------LFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTH 283 (291)
T ss_pred H------HHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHH
Confidence 1 1111111111 112344567999999999999999999885
No 251
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=318.68 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=198.8
Q ss_pred CccceeeccCCcEEEEEEEECC-eEEEEEEEccCCchh-hHHHHHHHHHHHhcCCCceeeeccccc--CCceEEEEecCC
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGNIQ-NKQFLQELEVLSKIRHPHLLLLLGACP--DHGCLVYEYMEN 480 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~~~-~~~f~~Ev~il~~l~Hpniv~l~g~~~--~~~~LV~Ey~~~ 480 (757)
.....+||+|-||.|.++...+ +.||||.++...... +..|..|+.+|.+|+|||||.|+|+|. +..|+|+|||++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 3455689999999999999887 899999999876554 488999999999999999999999994 344999999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|..+|..... +.+.-..-.+|+.||++|++||.+.+ +|||||.+.|+|+|.++++||+|||+++-+-..+.+..
T Consensus 620 GDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 620 GDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred CcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 999999976532 11233445679999999999999998 99999999999999999999999999996654432211
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHH--hCCCCccccchhhhhhchhhHHHHhhhh----cCCC
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLL--TAKPAIAITHKVETAIDEDNLAEILDAQ----AGDW 634 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ell--tG~~Pf~~~~~~~~~~~~~~l~~~ld~~----~~~~ 634 (757)
. ...+-...|||||.+..++++.++|||+||++|||++ +...||...+.-. + .++...+++.. ....
T Consensus 696 q----gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--v-ven~~~~~~~~~~~~~l~~ 768 (807)
T KOG1094|consen 696 Q----GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--V-VENAGEFFRDQGRQVVLSR 768 (807)
T ss_pred e----cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--H-HHhhhhhcCCCCcceeccC
Confidence 1 2235578899999999999999999999999999986 4678886332211 0 11222333322 1234
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccchhhhh
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKNQVLP 666 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~ 666 (757)
|..++..+.+++++||..+.++||++.++.+.
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 66788899999999999999999999864443
No 252
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.2e-34 Score=305.46 Aligned_cols=252 Identities=24% Similarity=0.329 Sum_probs=197.5
Q ss_pred CHHHHHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccccC-
Q 004388 394 TWEEIESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACPD- 469 (757)
Q Consensus 394 ~~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~- 469 (757)
+..++......|+....||.|+||.||+|.+. +..+|+|++.... .....+..|+.++.++ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 45566667788999999999999999999984 5689999886543 2345688899999998 69999999999842
Q ss_pred -------CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceE
Q 004388 470 -------HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSK 542 (757)
Q Consensus 470 -------~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~K 542 (757)
..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence 2389999999999999886543 234788888999999999999999988 99999999999999999999
Q ss_pred EeeecCccccCCCCCCccccccccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh
Q 004388 543 IGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA 617 (757)
Q Consensus 543 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~ 617 (757)
|+|||++........ ......|++.|+|||.+. ...++.++|||||||++|+|+||++||.........
T Consensus 162 l~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~ 235 (282)
T cd06636 162 LVDFGVSAQLDRTVG------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL 235 (282)
T ss_pred EeeCcchhhhhcccc------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh
Confidence 999999876542211 123357899999999875 346788999999999999999999999643222111
Q ss_pred hchhhHHHHhhhhcC-CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 618 IDEDNLAEILDAQAG-DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 618 ~~~~~l~~~ld~~~~-~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+...... ..+...+..+.+|+.+||..+|.+||++.+
T Consensus 236 ------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~e 275 (282)
T cd06636 236 ------FLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQ 275 (282)
T ss_pred ------hhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHH
Confidence 111111111 111235678999999999999999999875
No 253
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.2e-34 Score=302.38 Aligned_cols=244 Identities=23% Similarity=0.355 Sum_probs=182.0
Q ss_pred eeccCCcEEEEEEEECC----eEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCC
Q 004388 410 RIGMGGYGTVYKGTFHH----TFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGS 482 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~----~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gs 482 (757)
.||+|+||.||+|.... ..+++|.+.... ......|.+|+.+++.++||||+++++.|.+.. ++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 58999999999997532 246677665443 234567999999999999999999999987544 89999999999
Q ss_pred HHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 483 LEDRLYRKNN-TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 483 L~~~L~~~~~-~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
|.+++..... ...+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 9999875432 234667778899999999999999987 99999999999999999999999999864322110
Q ss_pred cccccCCcccccCCCcccccc-------CCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh---
Q 004388 562 TYKNTGPVGTLCYIDPEYQRT-------GLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ--- 630 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~-------~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~--- 630 (757)
........|++.|+|||++.. ..++.++|||||||++|||++ |.+||......+ .+..++...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~~~~~~~~~~~ 228 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE------VLNHVIKDQQVK 228 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHhhcccc
Confidence 011134578899999998742 245789999999999999997 577885332211 111111111
Q ss_pred --cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHH
Q 004388 631 --AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 631 --~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
....+......+.+++..|| .+|.+||++.+ |++.|
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~-i~~~l 266 (268)
T cd05086 229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEE-VHRLL 266 (268)
T ss_pred cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHH-HHHHh
Confidence 12233345678899999999 68999999984 55544
No 254
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.9e-34 Score=297.74 Aligned_cols=242 Identities=26% Similarity=0.421 Sum_probs=191.8
Q ss_pred eeccCCcEEEEEEEEC-CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCHHH
Q 004388 410 RIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSLED 485 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL~~ 485 (757)
+||.|+||.||++.+. +..||+|.+...... ....|.+|+.+++++.||||+.+++++.+.. ++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 6899999999999876 689999988765433 4567899999999999999999999986554 89999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccc
Q 004388 486 RLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKN 565 (757)
Q Consensus 486 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~ 565 (757)
++..... .+++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+||+|||++......... ...
T Consensus 82 ~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~----~~~ 152 (251)
T cd05041 82 FLRKKKN--RLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT----VSD 152 (251)
T ss_pred HHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcce----ecc
Confidence 9865432 5788899999999999999999988 999999999999999999999999999765422110 000
Q ss_pred cCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCChhHHHHHH
Q 004388 566 TGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWPIKETKELA 643 (757)
Q Consensus 566 ~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p~~~~~~l~ 643 (757)
....++..|+|||++.++.++.++|||||||++|+|+| |..||..... ......+... ....|...+..+.
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 225 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-------QQTRERIESGYRMPAPQLCPEEIY 225 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-------HHHHHHHhcCCCCCCCccCCHHHH
Confidence 12234677999999988889999999999999999999 8888853321 1112222221 1123345567899
Q ss_pred HHHHHHhhccCCCCCccchhhhhHH
Q 004388 644 ALGLSCAELRRKDRPDLKNQVLPVL 668 (757)
Q Consensus 644 ~Li~~Cl~~~p~~RPs~~~~vl~~L 668 (757)
+++.+|+..+|.+||++.+ ++..|
T Consensus 226 ~li~~~l~~~p~~Rp~~~e-ll~~l 249 (251)
T cd05041 226 RLMLQCWAYDPENRPSFSE-IYNEL 249 (251)
T ss_pred HHHHHHhccChhhCcCHHH-HHHHh
Confidence 9999999999999999974 54444
No 255
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.2e-34 Score=310.85 Aligned_cols=249 Identities=21% Similarity=0.319 Sum_probs=189.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
..|....+||.|+||.||+|... +..||+|.+.... ......+.+|+.+++.++||||+++++++.+.. ++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 35788889999999999999875 5689999886443 223446788999999999999999999986544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++ ++|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 97 58988886543 34888999999999999999999988 99999999999999999999999999976443221
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh---------chhhHHHHh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI---------DEDNLAEIL 627 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~---------~~~~l~~~l 627 (757)
......+++.|+|||++.+ ..++.++|||||||++|+|+||++||......+... ....+..++
T Consensus 160 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 160 ------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred ------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 1123467899999998765 457889999999999999999999996433211100 000011111
Q ss_pred hhh------cCC--------CChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 628 DAQ------AGD--------WPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 628 d~~------~~~--------~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
... ... +....+..+.+|+.+|+..+|.+||++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ei 283 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEA 283 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 000 000 111345678999999999999999998853
No 256
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=320.16 Aligned_cols=236 Identities=27% Similarity=0.413 Sum_probs=192.1
Q ss_pred CccceeeccCCcEEEEEEEECC--eEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCC-c-eEEEEe
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDH-G-CLVYEY 477 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-~-~LV~Ey 477 (757)
|...+.||.|+||.||.+++.. ..||||.+..... ....+++.||..|.+++|||+|.+-|+|... . .|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 6677789999999999998854 4899999876543 3456789999999999999999999998543 3 799999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|- ||-.|+|.-.. +++...++.-|..+.+.||.|||+++ .||||||..||||.++|.+||+|||.|.+..+.
T Consensus 108 Cl-GSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-- 179 (948)
T KOG0577|consen 108 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-- 179 (948)
T ss_pred Hh-ccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch--
Confidence 95 78888775432 46888899999999999999999998 999999999999999999999999999887654
Q ss_pred CccccccccCCcccccCCCcccc---ccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC-
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQ---RTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD- 633 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~- 633 (757)
..++|||+|||||++ ..|.|+-++|||||||+..||.-.+||+...+.....+ .+-....+.
T Consensus 180 --------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY------HIAQNesPtL 245 (948)
T KOG0577|consen 180 --------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY------HIAQNESPTL 245 (948)
T ss_pred --------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH------HHHhcCCCCC
Confidence 345999999999976 45789999999999999999999999986443332211 111111111
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.....+..|..++..||+.-|.+||+..+
T Consensus 246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ 274 (948)
T KOG0577|consen 246 QSNEWSDYFRNFVDSCLQKIPQERPTSEE 274 (948)
T ss_pred CCchhHHHHHHHHHHHHhhCcccCCcHHH
Confidence 12355788999999999999999999763
No 257
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-34 Score=305.54 Aligned_cols=248 Identities=29% Similarity=0.343 Sum_probs=194.3
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC----ceEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~LV~ 475 (757)
++|....+||.|+||.||+|.+. ++.+|+|.+..... .....+.+|++++++++||||++++++|.+. .++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36778889999999999999984 56899999875433 3456789999999999999999999988532 38999
Q ss_pred EecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 476 EYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
||+++++|.+++... .....++......|+.||+.||.|||+.+ ++|+||+|.||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987642 23345888999999999999999999988 99999999999999999999999999875542
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh---c
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ---A 631 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~---~ 631 (757)
.. .....++..|+|||.+.+..++.++|||||||++|+|+||+.||..... ...........+.... .
T Consensus 158 ~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd06621 158 SL--------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE-PPLGPIELLSYIVNMPNPEL 228 (287)
T ss_pred cc--------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccC-CCCChHHHHHHHhcCCchhh
Confidence 21 1234678899999999888999999999999999999999999975422 0000011111111101 1
Q ss_pred CCCC---hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 632 GDWP---IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 632 ~~~p---~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+ ...+..+.+++.+||..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e 262 (287)
T cd06621 229 KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWD 262 (287)
T ss_pred ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHH
Confidence 1111 134678999999999999999999985
No 258
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.1e-34 Score=306.06 Aligned_cols=236 Identities=27% Similarity=0.355 Sum_probs=194.3
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|.....||.|+||.||++.+. +..+|+|++.... ......+.+|+++|++++||||+++++++.+.. ++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 6778889999999999999885 5689999986532 223466889999999999999999999986554 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+++++|.+++.... .++...+..++.||+.||.|||+.+ |+||||+|.|||++.++.+||+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 82 YVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred cCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999987653 4888999999999999999999987 999999999999999999999999999876533
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
.....|++.|+|||++.+..++.++||||||+++|+|+||+.||...... .....+. ......|.
T Consensus 155 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~~~~~~ 219 (290)
T cd05580 155 --------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI------QIYEKIL-EGKVRFPS 219 (290)
T ss_pred --------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHh-cCCccCCc
Confidence 12346899999999988888899999999999999999999999644311 1111122 11223444
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccc
Q 004388 637 KETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
..+..+.+++.+||..+|.+||+..
T Consensus 220 ~~~~~l~~li~~~l~~~p~~R~~~~ 244 (290)
T cd05580 220 FFSPDAKDLIRNLLQVDLTKRLGNL 244 (290)
T ss_pred cCCHHHHHHHHHHccCCHHHccCcc
Confidence 5578999999999999999999543
No 259
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-34 Score=319.09 Aligned_cols=187 Identities=25% Similarity=0.382 Sum_probs=158.0
Q ss_pred cCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
.+|.....||.|+||.||+|...+ ..||+|+.... .+..|+.++++++||||+++++++.+.. ++||||+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 368888999999999999999864 48999975432 2356999999999999999999986544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
. |+|.+++.... ..+++..+..|+.||+.||.|||..+ |+||||||+|||++.++.+||+|||+++......
T Consensus 140 ~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 211 (357)
T PHA03209 140 S-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-- 211 (357)
T ss_pred C-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCc--
Confidence 5 68888876533 35899999999999999999999988 9999999999999999999999999997543221
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCc
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAI 608 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf 608 (757)
......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 -----AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -----ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 113457999999999999889999999999999999999865443
No 260
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.3e-34 Score=298.80 Aligned_cols=239 Identities=25% Similarity=0.373 Sum_probs=194.1
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-----chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-----NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-----~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
|.....||.|+||.||+|... +..|++|.+.... ......+.+|+.+++.++||||+++++++.+.. ++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 566678999999999999885 6799999886543 123467889999999999999999999986544 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++++|.+++.+.. .+++..+..++.||+.||.|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 82 ELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999886543 4889999999999999999999988 999999999999999999999999998875433
Q ss_pred CCCccccccccCCcccccCCCccccccCC-CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh-hhcCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGL-ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD-AQAGD 633 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~ 633 (757)
. ......|++.|++||.+.... ++.++|+|||||++|+|++|++||.......... .... .....
T Consensus 156 ~-------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~------~~~~~~~~~~ 222 (258)
T cd06632 156 S-------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVF------KIGRSKELPP 222 (258)
T ss_pred c-------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHH------HHHhcccCCC
Confidence 2 113456899999999887666 8999999999999999999999996543222111 1111 11223
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+......+.+++.+||..+|.+||++.+
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 251 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAE 251 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHH
Confidence 34456788999999999999999999885
No 261
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.1e-34 Score=308.81 Aligned_cols=248 Identities=27% Similarity=0.341 Sum_probs=197.6
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|...+.||.|+||.||+|... +..+|+|.+...... ....+..|++++..++||||+++++.+.+.. |+|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5788889999999999999885 469999998765322 4456889999999999999999999986554 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+.+++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 82 YCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred ecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999886432 346899999999999999999999988 9999999999999999999999999987654322
Q ss_pred CCcc-----------------------ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccch
Q 004388 557 SFVS-----------------------TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHK 613 (757)
Q Consensus 557 ~~~~-----------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~ 613 (757)
.... .........||..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 1110 00111234789999999999888899999999999999999999999964432
Q ss_pred hhhhhchhhHHHHhhhhcCCCChh--HHHHHHHHHHHHhhccCCCCCccch
Q 004388 614 VETAIDEDNLAEILDAQAGDWPIK--ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 614 ~~~~~~~~~l~~~ld~~~~~~p~~--~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. ..+..++... ..++.. .+..+.+++.+||..+|.+||+...
T Consensus 238 ~------~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~ 281 (316)
T cd05574 238 D------ETFSNILKKE-VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKR 281 (316)
T ss_pred H------HHHHHHhcCC-ccCCCccccCHHHHHHHHHHccCCHhHCCCchh
Confidence 2 1222222221 222322 5788999999999999999999554
No 262
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.6e-34 Score=309.94 Aligned_cols=235 Identities=19% Similarity=0.309 Sum_probs=190.3
Q ss_pred ceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCCH
Q 004388 408 NLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGSL 483 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gsL 483 (757)
..+||.|+||.||++... +..||+|++..........+.+|+.++..++||||+++++++... .++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 346999999999999874 679999998765555566788999999999999999999988544 4899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
..++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 106 ~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~------ 172 (297)
T cd06659 106 TDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------ 172 (297)
T ss_pred HHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc------
Confidence 987743 24889999999999999999999988 99999999999999999999999999976543221
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc---CCCChhHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA---GDWPIKETK 640 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~---~~~p~~~~~ 640 (757)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||........ +. .+.... ...+...+.
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~ 245 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA------MK-RLRDSPPPKLKNAHKISP 245 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HH-HHhccCCCCccccCCCCH
Confidence 12335789999999999888899999999999999999999999964332211 11 111111 111223467
Q ss_pred HHHHHHHHHhhccCCCCCccch
Q 004388 641 ELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 641 ~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+.+++.+||..+|.+||++.+
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ 267 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQE 267 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHH
Confidence 7999999999999999999885
No 263
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=300.50 Aligned_cols=250 Identities=25% Similarity=0.265 Sum_probs=206.6
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHH---HHHHHHHHHhcCCCceeeecccccC--CceEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQ---FLQELEVLSKIRHPHLLLLLGACPD--HGCLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~---f~~Ev~il~~l~Hpniv~l~g~~~~--~~~LV~ 475 (757)
++|...+.||+|.||.|.+++-+ +..+|+|+++.......++ -+.|-.+|...+||.+..|-..|+. ..|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 46777889999999999999876 5699999999876655544 4668899999999999998777754 459999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||..||.|.-+|.+.. .++......+-.+|..||.|||+.+ ||+||||.+|+|||.+|++||+||||++.--..
T Consensus 248 eyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 248 EYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccc
Confidence 9999999988886644 3666666678899999999999988 999999999999999999999999999753322
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
. ..+...+|||.|+|||++....|+..+|+|.+||++|||++|+.||... +.+.+.+++-..-..+|
T Consensus 322 g------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~-------dh~kLFeLIl~ed~kFP 388 (516)
T KOG0690|consen 322 G------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK-------DHEKLFELILMEDLKFP 388 (516)
T ss_pred c------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc-------chhHHHHHHHhhhccCC
Confidence 2 2346689999999999999999999999999999999999999999643 34566677666556788
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
...+++...|+.-.|..||++|-.-...=..++.+.
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 888999999999999999999966543333333333
No 264
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.1e-34 Score=299.11 Aligned_cols=247 Identities=28% Similarity=0.399 Sum_probs=202.0
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
++|.....||.|+||.||+|... +..++||++..... .....+.+|+.++.+++|||++++++++.... ++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788889999999999999886 56899999876544 44577999999999999999999999986544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
+++++|.+++... .+++...+..++.|++.||.|||+ .+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999998754 358899999999999999999999 88 9999999999999999999999999998765432
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
.. .....++..|+|||.+.+..++.++|+||||+++|+|+||+.||....... .......+........+.
T Consensus 155 ~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~ 225 (264)
T cd06623 155 DQ------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAICDGPPPSLPA 225 (264)
T ss_pred Cc------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHHhcCCCCCCCc
Confidence 21 123468899999999998899999999999999999999999996543200 011122222222333444
Q ss_pred h-HHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 637 K-ETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 637 ~-~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
. .+..+.+++.+||..+|.+||++.+.+
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~R~~~~~ll 254 (264)
T cd06623 226 EEFSPEFRDFISACLQKDPKKRPSAAELL 254 (264)
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 4 678999999999999999999998533
No 265
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4e-34 Score=298.63 Aligned_cols=245 Identities=23% Similarity=0.359 Sum_probs=197.6
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|+...+||.|+||.||++... +..||+|.+.... ......+.+|+.++++++||||+++++++.+.. ++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4777889999999999999874 5689999886432 233457899999999999999999999986554 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999998865332 35788999999999999999999987 99999999999999999999999999986643221
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
......|++.|+|||++.++.++.++|+|||||++++|+||+.||...... .....++.......+..
T Consensus 157 ------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 224 (256)
T cd08218 157 ------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKIIRGSYPPVSSH 224 (256)
T ss_pred ------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHhcCCCCCCccc
Confidence 112346889999999998888999999999999999999999998643211 11222222222333455
Q ss_pred HHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.+..+.+++.+||+.+|.+||++.+++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~vl 251 (256)
T cd08218 225 YSYDLRNLVSQLFKRNPRDRPSVNSIL 251 (256)
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence 678899999999999999999998643
No 266
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.6e-34 Score=302.88 Aligned_cols=245 Identities=29% Similarity=0.382 Sum_probs=195.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
+|.....||.|+||.||++.+. +..+++|.+.... ......+.+|++++++++||||+++++++.... ++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 4666778999999999999986 5689999887653 234567899999999999999999999986554 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++++|.+++.... ..++......++.|++.||.|||+ .+ ++||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 9999999887543 458889999999999999999999 77 99999999999999999999999999876542211
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
....|+..|+|||++.+..++.++||||||+++|+|+||+.||......... ....+..++.......+..
T Consensus 157 --------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (265)
T cd06605 157 --------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG-IFELLQYIVNEPPPRLPSG 227 (265)
T ss_pred --------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc-HHHHHHHHhcCCCCCCChh
Confidence 1257889999999998889999999999999999999999999643211000 0011122222222222332
Q ss_pred -HHHHHHHHHHHHhhccCCCCCccch
Q 004388 638 -ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 638 -~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..+.+++.+||..+|.+||++.+
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (265)
T cd06605 228 KFSPDFQDFVNLCLIKDPRERPSYKE 253 (265)
T ss_pred hcCHHHHHHHHHHcCCCchhCcCHHH
Confidence 5778999999999999999999885
No 267
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.6e-34 Score=298.61 Aligned_cols=249 Identities=23% Similarity=0.305 Sum_probs=198.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
++|+..+.||.|+||.||+|... +..+++|++.... ......+.+|+.+|+.++|||++++++.+.+.. ++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36888899999999999999874 5589999986543 335567899999999999999999999875544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++++|.+++........+++.....++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999876543346899999999999999999999988 99999999999999999999999999987664332
Q ss_pred CccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC-
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP- 635 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p- 635 (757)
... .......|+..|++||++... .++.++|+|||||++|+|+||+.||....... .+.+.+.......+
T Consensus 158 ~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~ 229 (267)
T cd06610 158 RTR--KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLMLTLQNDPPSLET 229 (267)
T ss_pred ccc--cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHHHHhcCCCCCcCC
Confidence 110 112344689999999988776 78999999999999999999999996433221 11111111111111
Q ss_pred ----hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 ----IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 ----~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+.+++.+||..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEE 260 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHH
Confidence 245678999999999999999999875
No 268
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.8e-34 Score=299.81 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=195.1
Q ss_pred CCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCc------hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 404 SFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGN------IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~------~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
+|+....||+|+||.||+|.. .+..+|+|++..... .....+.+|+.++++++||||+++++++.+.. ++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477778999999999999986 456899999865431 12456889999999999999999999987654 89
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC-ceEEeeecCcccc
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-VSKIGDVGLSTML 552 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-~~KL~DFGla~~~ 552 (757)
||||+++++|.+++...+ ++++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++ .+||+|||++...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999886543 5889999999999999999999988 99999999999998776 6999999999776
Q ss_pred CCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh-hhhc
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL-DAQA 631 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l-d~~~ 631 (757)
....... ........||..|+|||++.+..++.++||||||+++|+|++|..||........ ...+.... ....
T Consensus 155 ~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~ 229 (268)
T cd06630 155 AAKGTGA--GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFKIASATTA 229 (268)
T ss_pred ccccccC--CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHHHhccCCC
Confidence 5432110 0111234689999999999888899999999999999999999999963321110 00111111 1112
Q ss_pred CCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 632 GDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 632 ~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...|...+..+.+++.+|+..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 260 (268)
T cd06630 230 PSIPEHLSPGLRDVTLRCLELQPEDRPPSRE 260 (268)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCcCHHH
Confidence 3344556788999999999999999999985
No 269
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=312.23 Aligned_cols=260 Identities=24% Similarity=0.385 Sum_probs=208.5
Q ss_pred cccCCCHHHHHHhhc-CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceee
Q 004388 389 RYRNLTWEEIESATL-SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLL 462 (757)
Q Consensus 389 ~~~~~~~~ei~~at~-~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~ 462 (757)
+|-...|-|....|. .|+.-+.||+||||.||-+... |.-+|.|.+..... ......++|-.||.+++.|.||.
T Consensus 170 rFlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVs 249 (591)
T KOG0986|consen 170 RFLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVS 249 (591)
T ss_pred HHHHHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEE
Confidence 344445555555554 4888899999999999987664 55788888765432 22334678999999999999999
Q ss_pred eccccc--CCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 463 LLGACP--DHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 463 l~g~~~--~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
|-.+|. +..||||..|.||+|.-+|.+.++ +.++......++.+|+.||.+||+.. ||+|||||+|||||+.|+
T Consensus 250 laYAfeTkd~LClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~Gh 325 (591)
T KOG0986|consen 250 LAYAFETKDALCLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGH 325 (591)
T ss_pred EeeeecCCCceEEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCC
Confidence 988874 566999999999999988887665 67999999999999999999999988 999999999999999999
Q ss_pred eEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch
Q 004388 541 SKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE 620 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 620 (757)
+.|+|+|||..++..... ++.+||.+|||||++.++.|+...|+|||||+||||+.|+.||.... .....
T Consensus 326 vRISDLGLAvei~~g~~~-------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K---eKvk~ 395 (591)
T KOG0986|consen 326 VRISDLGLAVEIPEGKPI-------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK---EKVKR 395 (591)
T ss_pred eEeeccceEEecCCCCcc-------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh---hhhhH
Confidence 999999999988765432 44599999999999999999999999999999999999999995221 11112
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+...+-.....+|...++++.+|....|+.||.+|-.-..
T Consensus 396 eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg 437 (591)
T KOG0986|consen 396 EEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRG 437 (591)
T ss_pred HHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCC
Confidence 222222222234566677889999999999999999976553
No 270
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.1e-34 Score=306.20 Aligned_cols=246 Identities=22% Similarity=0.286 Sum_probs=192.4
Q ss_pred cCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++|...+.||.|+||.||++.... ..|++|.+..... .....+.+|+.+++.++||||+++++.+.... ++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 367888999999999999998864 5899998875432 23456889999999999999999999986655 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||++||+|.+++...+ .+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999986543 4889999999999999999999987 999999999999999999999999998742211
Q ss_pred CC---------CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHH
Q 004388 556 PS---------FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEI 626 (757)
Q Consensus 556 ~~---------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ 626 (757)
.. ............|+..|+|||++....++.++|+|||||++|+|+||..||...... ..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~~ 228 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQV 228 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH
Confidence 00 000111122346889999999998888999999999999999999999999633211 111111
Q ss_pred hhhhcCCCCh---hHHHHHHHHHHHHhhccCCCCCccc
Q 004388 627 LDAQAGDWPI---KETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 627 ld~~~~~~p~---~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
... ...+|. ..+..+.+++.+||..+|.+||+..
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 265 (305)
T cd05609 229 ISD-DIEWPEGDEALPADAQDLISRLLRQNPLERLGTG 265 (305)
T ss_pred Hhc-ccCCCCccccCCHHHHHHHHHHhccChhhccCcc
Confidence 111 111221 3567899999999999999999975
No 271
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.8e-34 Score=296.90 Aligned_cols=244 Identities=26% Similarity=0.387 Sum_probs=195.6
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||.|+||.||++... +..+|||.+.... ......+.+|+.+|++++|||++++++.+.+.. ++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4777889999999999998874 5689999986542 234567889999999999999999999875443 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecCccccCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGla~~~~~~~ 556 (757)
+++++|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||+|+||+++.+ +.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999987543 235889999999999999999999987 9999999999999854 568999999998765432
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
. .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||....... .............+.
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 223 (256)
T cd08220 157 K-------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA------LVLKIMSGTFAPISD 223 (256)
T ss_pred c-------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH------HHHHHHhcCCCCCCC
Confidence 1 123468999999999988889999999999999999999999996432211 111222222223344
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+..+.+++.+||..+|.+||++.+.+
T Consensus 224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll 251 (256)
T cd08220 224 RYSPDLRQLILSMLNLDPSKRPQLSQIM 251 (256)
T ss_pred CcCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 4678899999999999999999998643
No 272
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.9e-34 Score=300.26 Aligned_cols=240 Identities=25% Similarity=0.273 Sum_probs=197.5
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+|.....||.|+||.||+|.+. +..||+|++..... ...+.+.+|++++++++||||+++++++.+.. ++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778889999999999999986 66899999875432 34567899999999999999999999986544 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|+.+++|.+++... .++++.....|+.||+.||.|||..+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999988654 35889999999999999999999987 9999999999999999999999999988765432
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
......|+..|+|||++.+..++.++|+||||+++|+|++|+.||...... ....+...........|.
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~ 223 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQETADVLYPA 223 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhccccccCcc
Confidence 113356889999999998888999999999999999999999999744321 011122222222234455
Q ss_pred hHHHHHHHHHHHHhhccCCCCCcc
Q 004388 637 KETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
..+..+.+++.+||..+|.+||++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGD 247 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCc
Confidence 567899999999999999999998
No 273
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.9e-34 Score=306.12 Aligned_cols=247 Identities=23% Similarity=0.352 Sum_probs=190.5
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|+..++||.|+||.||+|.+. +..||+|++..... ...+.+.+|+++++.++||||++++++|.+.. ++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5778889999999999999985 56899998764322 23456889999999999999999999996654 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++++|..+.... ..+++..+..++.||+.||.|||+.+ |+||||+|+||+++.++.++|+|||++..+.....
T Consensus 82 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 82 VDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred CCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 9999888765432 23899999999999999999999987 99999999999999999999999999987644321
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchh--------hHHHHhh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDED--------NLAEILD 628 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~--------~l~~~ld 628 (757)
......++..|+|||++.+ ..++.++|||||||++|+|+||++||......+...... ......+
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07846 156 ------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ 229 (286)
T ss_pred ------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhc
Confidence 1133468999999998765 457889999999999999999999996433221100000 0000000
Q ss_pred ------hh-cCC---------CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 ------AQ-AGD---------WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 ------~~-~~~---------~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.. ... .....+..+.+|+.+||..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 279 (286)
T cd07846 230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQ 279 (286)
T ss_pred cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHH
Confidence 00 000 01234677999999999999999999985
No 274
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2e-34 Score=308.36 Aligned_cols=240 Identities=20% Similarity=0.295 Sum_probs=190.9
Q ss_pred ceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCCH
Q 004388 408 NLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGSL 483 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gsL 483 (757)
...||.|+||.||++... +..||||.+........+.+.+|+.+++.++||||+++++.+... .++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 356999999999999874 568999998765555567789999999999999999999987544 4899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
.+++... .+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------ 173 (292)
T cd06658 107 TDIVTHT----RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------ 173 (292)
T ss_pred HHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc------
Confidence 9987432 3788999999999999999999987 99999999999999999999999999876543221
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELA 643 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~ 643 (757)
......|++.|+|||++.+..++.++|||||||++|||++|+.||......... ..+...+... .......+..+.
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 249 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM---RRIRDNLPPR-VKDSHKVSSVLR 249 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhcCCCc-cccccccCHHHH
Confidence 112346899999999998888999999999999999999999999643321110 0011111111 111223566899
Q ss_pred HHHHHHhhccCCCCCccchhh
Q 004388 644 ALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 644 ~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+++.+||..+|.+||++.+++
T Consensus 250 ~li~~~l~~~P~~Rpt~~~il 270 (292)
T cd06658 250 GFLDLMLVREPSQRATAQELL 270 (292)
T ss_pred HHHHHHccCChhHCcCHHHHh
Confidence 999999999999999998533
No 275
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.3e-34 Score=303.09 Aligned_cols=247 Identities=26% Similarity=0.392 Sum_probs=190.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|+....||.|+||.||+|.+. +..||+|++.... ....+.+.+|+.++++++|||++++++++.+.. ++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 5778889999999999999985 5689999876432 223456789999999999999999999986544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++++|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 82 CDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred cCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 9998887765432 24899999999999999999999987 99999999999999999999999999987654321
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchh-hH-------HHHhh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDED-NL-------AEILD 628 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~-~l-------~~~ld 628 (757)
......++..|+|||++.+ ..++.++|||||||++|+|+||++||......+...... .+ ..+.+
T Consensus 156 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 156 ------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred ------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 1123467899999998765 457899999999999999999999996443322111000 00 00000
Q ss_pred hh------cCCC-----C-----hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 AQ------AGDW-----P-----IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 ~~------~~~~-----p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.. .... + ...+..+.+|+.+||..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 279 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEE 279 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHH
Confidence 00 0000 0 123577899999999999999999975
No 276
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.8e-34 Score=299.30 Aligned_cols=243 Identities=23% Similarity=0.416 Sum_probs=191.1
Q ss_pred CCccceeeccCCcEEEEEEEECC---eEEEEEEEccCC----------chhhHHHHHHHHHHHh-cCCCceeeecccccC
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH---TFAAVKVLQSKG----------NIQNKQFLQELEVLSK-IRHPHLLLLLGACPD 469 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~---~~vAvK~l~~~~----------~~~~~~f~~Ev~il~~-l~Hpniv~l~g~~~~ 469 (757)
+|+....||.|+||.||+|.+.+ ..+|+|.+.... ......+.+|+.++.+ ++||||++++++|.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46777889999999999999864 589999875321 2233457789998875 799999999999866
Q ss_pred Cc--eEEEEecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCCceEEee
Q 004388 470 HG--CLVYEYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNLVSKIGD 545 (757)
Q Consensus 470 ~~--~LV~Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~~~KL~D 545 (757)
.. ++||||++|++|.+++... .....+++..+..++.|++.||.|||+ .+ ++||||+|+|||++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 54 8999999999999987542 223458899999999999999999996 44 99999999999999999999999
Q ss_pred ecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHH
Q 004388 546 VGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 546 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
||++....... ......|+..|++||++.++.++.++||||||+++|+|++|++||........ ...
T Consensus 158 fg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~------~~~ 224 (269)
T cd08528 158 FGLAKQKQPES-------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL------ATK 224 (269)
T ss_pred ccceeeccccc-------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH------HHH
Confidence 99998755432 12345789999999999888899999999999999999999999964322111 111
Q ss_pred HhhhhcCCCC-hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 626 ILDAQAGDWP-IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 626 ~ld~~~~~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+........+ ...+..+.+++.+||..+|.+||++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 225 IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred HhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 1111111111 134678999999999999999999985
No 277
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.3e-34 Score=302.02 Aligned_cols=238 Identities=24% Similarity=0.366 Sum_probs=189.7
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCCH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGSL 483 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gsL 483 (757)
||.|+||.||++... +..+|+|++.... ......+..|+.+|++++||||+++++.+... .|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999865 5689999986532 22344577899999999999999999988543 4899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++........
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------ 150 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK------ 150 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCCc------
Confidence 998876543 45899999999999999999999988 99999999999999999999999999876543211
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELA 643 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~ 643 (757)
.....++..|++||++.++.++.++|||||||++|+|++|+.||....... ....+...........+...+..+.
T Consensus 151 -~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (277)
T cd05577 151 -IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV---EKEELKRRTLEMAVEYPDKFSPEAK 226 (277)
T ss_pred -cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc---cHHHHHhccccccccCCccCCHHHH
Confidence 123468889999999988889999999999999999999999996432210 0111111111112233445678899
Q ss_pred HHHHHHhhccCCCCCccch
Q 004388 644 ALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 644 ~Li~~Cl~~~p~~RPs~~~ 662 (757)
+++.+||+.+|.+||++.+
T Consensus 227 ~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 227 DLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHccCChhHccCCCc
Confidence 9999999999999998776
No 278
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-35 Score=322.48 Aligned_cols=232 Identities=24% Similarity=0.404 Sum_probs=185.1
Q ss_pred eeccCCcEEEEEEEECCeEEEEEE--Ec----cCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc----eEEEEecC
Q 004388 410 RIGMGGYGTVYKGTFHHTFAAVKV--LQ----SKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG----CLVYEYME 479 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~~~vAvK~--l~----~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~----~LV~Ey~~ 479 (757)
.||+|+|-+||+|.+..+.+.|.. ++ .......++|..|+++|+.|.|||||++|.+|.+.. -+|.|+|.
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T 126 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT 126 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc
Confidence 599999999999998766554432 11 112334578999999999999999999999996543 57999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecCccccCCCCCC
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGla~~~~~~~~~ 558 (757)
.|+|..|+.+.+. ++......|+.||+.||.|||++. +||||||||.+||+|+.+ |.+||+|+|||+......
T Consensus 127 SGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-- 200 (632)
T KOG0584|consen 127 SGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-- 200 (632)
T ss_pred CCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence 9999999987654 677889999999999999999998 489999999999999865 999999999999876432
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc-CCCCh-
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA-GDWPI- 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~-~~~p~- 636 (757)
....+|||.|||||... ..|+..+||||||++++||+|+..||.-.... +++..... |..|.
T Consensus 201 ------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~---------AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 201 ------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP---------AQIYKKVTSGIKPAA 264 (632)
T ss_pred ------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH---------HHHHHHHHcCCCHHH
Confidence 24479999999999876 77999999999999999999999999622111 11111111 11121
Q ss_pred ---hHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 637 ---KETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 637 ---~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
-..+++.+||.+|+.. ..+||++.+.+
T Consensus 265 l~kV~dPevr~fIekCl~~-~~~R~sa~eLL 294 (632)
T KOG0584|consen 265 LSKVKDPEVREFIEKCLAT-KSERLSAKELL 294 (632)
T ss_pred hhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence 1257899999999999 99999998644
No 279
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.4e-34 Score=301.30 Aligned_cols=248 Identities=27% Similarity=0.377 Sum_probs=196.2
Q ss_pred HhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccccCC------
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACPDH------ 470 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~------ 470 (757)
..+++|.....||.|+||.||+|... +..+++|++..... ....|.+|+.+++++ .||||++++++|.+.
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35678999999999999999999985 45899999876543 346789999999999 699999999998432
Q ss_pred --ceEEEEecCCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeec
Q 004388 471 --GCLVYEYMENGSLEDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVG 547 (757)
Q Consensus 471 --~~LV~Ey~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFG 547 (757)
.++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 379999999999999886532 2345889999999999999999999988 9999999999999999999999999
Q ss_pred CccccCCCCCCccccccccCCcccccCCCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhh
Q 004388 548 LSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-----GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDN 622 (757)
Q Consensus 548 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 622 (757)
++........ ......|++.|+|||++.. ..++.++|||||||+||+|+||++||...+... .
T Consensus 159 ~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~ 226 (275)
T cd06608 159 VSAQLDSTLG------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR------A 226 (275)
T ss_pred cceecccchh------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH------H
Confidence 9876543221 1234578999999998753 346789999999999999999999996432221 1
Q ss_pred HHHHhhhhcCC--CChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 623 LAEILDAQAGD--WPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 623 l~~~ld~~~~~--~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
+..+....... .+...+..+.+|+.+||..+|.+||++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~l 269 (275)
T cd06608 227 LFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEEL 269 (275)
T ss_pred HHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHH
Confidence 12222211111 122356789999999999999999999853
No 280
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=293.93 Aligned_cols=246 Identities=22% Similarity=0.353 Sum_probs=193.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
++|+....||+|.|+.||++... +..+|+|+++.. ...+.+.+.+|+.|-..|+|||||+|...+.+.. |||+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 45666667999999999998765 457788876533 2335677889999999999999999999987665 79999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec---CCCceEEeeecCccccC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD---HNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld---~~~~~KL~DFGla~~~~ 553 (757)
+|.||+|..-+..+. .+++..+-..+.||+.+|.|+|.++ |||||+||+|+||. ..--+||+|||+|..+.
T Consensus 91 ~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 91 LVTGGELFEDIVARE---FYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred cccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999976554432 3566777889999999999999999 99999999999994 34568999999999887
Q ss_pred CCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD 633 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~ 633 (757)
... ...+.+|||.|||||++....|+..+|||+.|||||-||.|.+||....... +-++......|.....
T Consensus 165 ~g~-------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--lye~I~~g~yd~~~~~ 235 (355)
T KOG0033|consen 165 DGE-------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYEQIKAGAYDYPSPE 235 (355)
T ss_pred Ccc-------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--HHHHHhccccCCCCcc
Confidence 322 2356799999999999999999999999999999999999999996421110 0111111122222334
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
|+ ..+++..+|+.+||..||.+|.+..+.+
T Consensus 236 w~-~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 236 WD-TVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred cC-cCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 55 3578899999999999999999987643
No 281
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.7e-34 Score=310.42 Aligned_cols=252 Identities=17% Similarity=0.204 Sum_probs=185.0
Q ss_pred ceeeccC--CcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecC
Q 004388 408 NLRIGMG--GYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYME 479 (757)
Q Consensus 408 ~~~IG~G--~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~ 479 (757)
..+||+| +||+||++... +..||+|.+.... ......+.+|+.+++.++||||++++++|.+. .++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 3568999 78999999875 5689999987543 22345577899999999999999999998554 489999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.+++.... ...+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.++++|||.+..........
T Consensus 83 ~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 83 YGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999886533 234899999999999999999999988 9999999999999999999999998765433211100
Q ss_pred -cccccccCCcccccCCCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc--hhhHHHHhhh-----
Q 004388 560 -STTYKNTGPVGTLCYIDPEYQRT--GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID--EDNLAEILDA----- 629 (757)
Q Consensus 560 -~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~--~~~l~~~ld~----- 629 (757)
..........++..|+|||++.+ ..++.++|||||||++|+|+||+.||........... .+.+...++.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence 00001122367888999999875 4589999999999999999999999963221110000 0000000000
Q ss_pred ------------------------hc--------CCCChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 630 ------------------------QA--------GDWPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 630 ------------------------~~--------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
.. .......+..+.+|+.+||+.||.+||++.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~el 304 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTL 304 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHH
Confidence 00 00111245689999999999999999999853
No 282
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1e-33 Score=296.44 Aligned_cols=246 Identities=26% Similarity=0.393 Sum_probs=194.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch--hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI--QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~--~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||+|+||.||+|... +..+++|++...... ....+.+|+.++++++||||+++++++.+.. ++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 3667789999999999999874 568999998765443 5667899999999999999999999986543 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++++|.+++.... .+++..+..|+.+++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999886532 3788899999999999999999988 99999999999999999999999999987654332
Q ss_pred CccccccccCCcccccCCCccccccCC---CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGL---ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
.... ......+++.|++||++.... ++.++||||||+++|+|++|+.||........ ....+........
T Consensus 155 ~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~ 227 (264)
T cd06626 155 TMGE--EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-----IMFHVGAGHKPPI 227 (264)
T ss_pred cccc--cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-----HHHHHhcCCCCCC
Confidence 1111 012357889999999987766 88999999999999999999999963321110 0011111111222
Q ss_pred Chh--HHHHHHHHHHHHhhccCCCCCccch
Q 004388 635 PIK--ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 635 p~~--~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
|.. .+..+.+++.+||+.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 257 (264)
T cd06626 228 PDSLQLSPEGKDFLDRCLESDPKKRPTASE 257 (264)
T ss_pred CcccccCHHHHHHHHHHccCCcccCCCHHH
Confidence 322 3778899999999999999999885
No 283
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.1e-34 Score=303.46 Aligned_cols=248 Identities=21% Similarity=0.329 Sum_probs=189.2
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|+....||.|+||.||+|... +..||||.+.... ......+.+|++++++++||||+++++++.+.. ++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5788889999999999999884 5689999886543 223356889999999999999999999986544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+. ++|..++.... ...+++..+..++.|++.||.|||..+ ++||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 96 68988876543 245899999999999999999999987 99999999999999999999999999876543221
Q ss_pred CccccccccCCcccccCCCccccccCC-CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchh--------hH----H
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGL-ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDED--------NL----A 624 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~--------~l----~ 624 (757)
. .....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||............. .+ .
T Consensus 156 ~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 T------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred c------cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 1 12335789999999876544 6889999999999999999999996443221111000 00 0
Q ss_pred HHh--hhhcCCC--------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 625 EIL--DAQAGDW--------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 625 ~~l--d~~~~~~--------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+. ......| ....+..+.+++.+||+.+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 277 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKA 277 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHH
Confidence 000 0000011 1123567889999999999999999875
No 284
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.9e-34 Score=299.96 Aligned_cols=239 Identities=26% Similarity=0.400 Sum_probs=192.8
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecC
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYME 479 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~ 479 (757)
|....+||.|+||.||+|... +..+|+|++.... ......|.+|+.++.+++||||+++++++.+.. ++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 566778999999999999874 5689999876433 233467889999999999999999999986544 89999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.+++.. ..+++.....++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..+.....
T Consensus 86 ~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06641 86 GGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh--
Confidence 9999998753 24889999999999999999999987 99999999999999999999999999876643221
Q ss_pred cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHH
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKET 639 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~ 639 (757)
......|+..|++||++.+..++.++|+|||||++|+|+||..||........ ...+........+...+
T Consensus 157 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~ 226 (277)
T cd06641 157 ----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV------LFLIPKNNPPTLEGNYS 226 (277)
T ss_pred ----hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH------HHHHhcCCCCCCCcccC
Confidence 12334688999999999888889999999999999999999999964322111 11111111222334567
Q ss_pred HHHHHHHHHHhhccCCCCCccch
Q 004388 640 KELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+.+++.+||..+|.+||++.+
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~ 249 (277)
T cd06641 227 KPLKEFVEACLNKEPSFRPTAKE 249 (277)
T ss_pred HHHHHHHHHHccCChhhCcCHHH
Confidence 88999999999999999999985
No 285
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6e-34 Score=302.15 Aligned_cols=247 Identities=22% Similarity=0.309 Sum_probs=187.2
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||.|+||.||+|.+. +..+|+|.+.... ......+.+|+.++++++||||+++++++.+.. ++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3677789999999999999985 5689999886532 222356788999999999999999999986554 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++ ++|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 97 57888776533 34899999999999999999999988 99999999999999999999999999986543221
Q ss_pred CccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch----------hhH---
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE----------DNL--- 623 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~----------~~l--- 623 (757)
......+++.|+|||++.+. .++.++|||||||++|+|+||..|+.........+.. ..+
T Consensus 155 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 155 ------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred ------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 11234678999999987664 4789999999999999999998886432222111100 000
Q ss_pred HHHhhhh-cCCC---------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 624 AEILDAQ-AGDW---------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 624 ~~~ld~~-~~~~---------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....+.. .... ....+..+.+++.+||..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 277 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE 277 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHH
Confidence 0000000 0000 1124578899999999999999999875
No 286
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.2e-33 Score=300.66 Aligned_cols=245 Identities=24% Similarity=0.365 Sum_probs=198.4
Q ss_pred HhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEE
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVY 475 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~ 475 (757)
..+++|.....||.|+||.||+|.+. +..+++|++..... ....+.+|+++++.++|||++++++++... .++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 34567788889999999999999986 67899999876544 566788999999999999999999988544 48999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++++|.+++.... ..+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 9999999999997654 35899999999999999999999987 999999999999999999999999998765432
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC--
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD-- 633 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~-- 633 (757)
.. ......+++.|++||++.+..++.++|+|||||++|+|+||+.||......... ..+.......
T Consensus 170 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~------~~~~~~~~~~~~ 237 (286)
T cd06614 170 KS------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL------FLITTKGIPPLK 237 (286)
T ss_pred hh------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhcCCCCCc
Confidence 21 112346789999999988888999999999999999999999998643322111 1111111111
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+...+..+.+++.+|++.+|..||++.+
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 266 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEE 266 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHH
Confidence 12225678999999999999999999985
No 287
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-33 Score=291.46 Aligned_cols=242 Identities=26% Similarity=0.421 Sum_probs=196.6
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCC
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMEN 480 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~ 480 (757)
|.....||.|++|.||++... +..+++|++..........+.+|++++++++|||++++++++... .++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 667788999999999999986 678999999876555567899999999999999999999988554 4899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
++|.+++.... ..+++..+..++.+++.||.|||..+ ++||||+|+||+++.++.++|+|||++........
T Consensus 82 ~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 82 GSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 99999886543 35899999999999999999999977 99999999999999999999999999987654321
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETK 640 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~ 640 (757)
.....|+..|++||++....++.++||||||+++|+|++|+.||........... .. .........+...+.
T Consensus 154 ----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~ 225 (253)
T cd05122 154 ----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK---IA-TNGPPGLRNPEKWSD 225 (253)
T ss_pred ----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HH-hcCCCCcCcccccCH
Confidence 1345788999999999888899999999999999999999999964322111100 00 011111112222367
Q ss_pred HHHHHHHHHhhccCCCCCccch
Q 004388 641 ELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 641 ~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+.+++.+||..+|.+||++.+
T Consensus 226 ~~~~~i~~~l~~~p~~R~t~~~ 247 (253)
T cd05122 226 EFKDFLKKCLQKNPEKRPTAEQ 247 (253)
T ss_pred HHHHHHHHHccCChhhCCCHHH
Confidence 8999999999999999999975
No 288
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.3e-33 Score=296.03 Aligned_cols=235 Identities=25% Similarity=0.320 Sum_probs=191.6
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCCH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGSL 483 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gsL 483 (757)
||.|+||.||+|.+. +..+++|++..... .....+.+|+.++++++||||+++++.+.+. .++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999997 67999999875432 2346789999999999999999999998654 4899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
.+++.+.. .+++..+..++.||+.||.|||+.+ ++|+||+|.||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~------- 147 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ------- 147 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-------
Confidence 99986543 3888999999999999999999987 9999999999999999999999999998765432
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh-hhcCCCChhHHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD-AQAGDWPIKETKEL 642 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~~p~~~~~~l 642 (757)
......|++.|++||++....++.++|+||||+++|+|++|..||....... ...+..+.. ......|...+..+
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 223 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILKGNGKLEFPNYIDKAA 223 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhccCCCCCCCcccCHHH
Confidence 1123468899999999888889999999999999999999999997543100 111122221 22234455557899
Q ss_pred HHHHHHHhhccCCCCCccch
Q 004388 643 AALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 643 ~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+++.+||..+|.+||++.+
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~ 243 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLK 243 (262)
T ss_pred HHHHHHHccCChhhCcCCcc
Confidence 99999999999999999654
No 289
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8.9e-34 Score=303.41 Aligned_cols=243 Identities=24% Similarity=0.368 Sum_probs=196.0
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
.+|...+.||.|+||.||+|.. .+..+++|.+........+.+.+|+.++++++||||+++++.|.+. .++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5788889999999999999986 4568999998765555567789999999999999999999998544 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++++|.+++.+. .+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 99 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc-
Confidence 999999988543 3788899999999999999999988 99999999999999999999999999876553321
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC--CCh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD--WPI 636 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~--~p~ 636 (757)
......|++.|++||++..+.++.++|||||||++|+|++|+.||.......... .+....... .+.
T Consensus 171 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~~~~~~~~~ 239 (293)
T cd06647 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGTPELQNPE 239 (293)
T ss_pred -----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCCCCCCCCcc
Confidence 1133468899999999988889999999999999999999999996433221110 010011111 122
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+..+.+++.+||..+|.+||++.+.+
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il 267 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELL 267 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 3456799999999999999999998544
No 290
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=8.2e-34 Score=300.02 Aligned_cols=241 Identities=26% Similarity=0.408 Sum_probs=192.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcC---CCceeeecccccCCc--eEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIR---HPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~---Hpniv~l~g~~~~~~--~LV~ 475 (757)
.|+....||.|+||.||+|.+. +..+|+|.+.... ......+.+|+.++++++ |||+++++++|.+.. ++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4666778999999999999974 5689999987542 334567889999999997 999999999986554 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++++|.+++... .+++.....++.+++.||.|||+.+ |+||||+|+||+++.++.++|+|||++..+...
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999987542 5889999999999999999999988 999999999999999999999999999876543
Q ss_pred CCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
.. ......|+..|+|||++.++ .++.++|+|||||++|+|++|.+||.......... .+........
T Consensus 155 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~------~~~~~~~~~~ 222 (277)
T cd06917 155 SS------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM------LIPKSKPPRL 222 (277)
T ss_pred cc------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh------ccccCCCCCC
Confidence 21 12334789999999987654 46899999999999999999999996433221110 0000011122
Q ss_pred Ch-hHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 635 PI-KETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 635 p~-~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
+. ..+..+.+++.+||..+|.+||++.+.
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~i 252 (277)
T cd06917 223 EDNGYSKLLREFVAACLDEEPKERLSAEEL 252 (277)
T ss_pred CcccCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 22 256789999999999999999998853
No 291
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=9.3e-34 Score=295.50 Aligned_cols=243 Identities=23% Similarity=0.398 Sum_probs=195.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||.|+||.||+|... +..+|+|.+.... ....+.+.+|+.+++.++||||+++++.+.+.. ++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777889999999999999885 5689999886542 223456889999999999999999999986654 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC-ceEEeeecCccccCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-VSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-~~KL~DFGla~~~~~~~ 556 (757)
+++++|.+++..... ..+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999998875432 35799999999999999999999988 99999999999998885 56999999998765432
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
.. .....|++.|+|||++.+..++.++|+||||+++|+|++|..||....... .............+.
T Consensus 157 ~~------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~ 224 (257)
T cd08225 157 EL------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ------LVLKICQGYFAPISP 224 (257)
T ss_pred cc------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHhcccCCCCCC
Confidence 11 123468999999999988889999999999999999999999996432211 112222222222233
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+..+.+++.+||..+|.+||++.+
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ 250 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITS 250 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHH
Confidence 45678999999999999999999985
No 292
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=8.5e-34 Score=303.37 Aligned_cols=244 Identities=24% Similarity=0.321 Sum_probs=189.9
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch-----hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI-----QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~-----~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV 474 (757)
+|.....||.|+||.||+|.+. ++.||||.+...... ....+..|++++++++||||+++++++.+.. ++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3667788999999999999875 569999998755322 2345678999999999999999999997644 899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+ +|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999886543 35899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh------
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL------ 627 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l------ 627 (757)
... ......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.......... .....+
T Consensus 155 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 225 (298)
T cd07841 155 PNR------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLG---KIFEALGTPTEE 225 (298)
T ss_pred CCc------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHH---HHHHHcCCCchh
Confidence 321 1123467889999998754 457899999999999999999988886433221100 000000
Q ss_pred ---------hhh----cCC-----CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 628 ---------DAQ----AGD-----WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 628 ---------d~~----~~~-----~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.. ... .....+..+.+++.+||..+|.+||++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e 278 (298)
T cd07841 226 NWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ 278 (298)
T ss_pred hhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHH
Confidence 000 000 01223578899999999999999999885
No 293
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-33 Score=301.08 Aligned_cols=239 Identities=20% Similarity=0.311 Sum_probs=192.3
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC--CceEEEEecCC
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD--HGCLVYEYMEN 480 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~~~LV~Ey~~~ 480 (757)
|....+||.|++|.||++... +..+++|++........+.+.+|+.+++.++||||+++++++.. ..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444568999999999999864 56899999876555556678899999999999999999998754 44899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--- 170 (285)
T cd06648 101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--- 170 (285)
T ss_pred CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc---
Confidence 999998865 24888999999999999999999988 99999999999999999999999999876543221
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh--cCCCChhH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ--AGDWPIKE 638 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~--~~~~p~~~ 638 (757)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||........ +..+.... ....+...
T Consensus 171 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 241 (285)
T cd06648 171 ---RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA------MKRIRDNLPPKLKNLHKV 241 (285)
T ss_pred ---ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH------HHHHHhcCCCCCcccccC
Confidence 11234689999999999888899999999999999999999999864332111 11111111 11112235
Q ss_pred HHHHHHHHHHHhhccCCCCCccch
Q 004388 639 TKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+..+.+++.+||..+|.+||++.+
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~ 265 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAE 265 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHH
Confidence 678999999999999999999885
No 294
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.5e-34 Score=300.87 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=191.6
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||.|+||.||+|.+. ++.||+|++.... ......+.+|+.++++++||||+++++++.+.. ++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 3677788999999999999874 6799999987653 233467899999999999999999999986554 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+ +++|.+++.... .++++..+..++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999886544 45899999999999999999999988 99999999999999999999999999987654321
Q ss_pred CccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc---------hhhHHH--
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID---------EDNLAE-- 625 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~---------~~~l~~-- 625 (757)
. ......|+..|+|||++.+. .++.++|||||||++|+|+||.+||........... ......
T Consensus 155 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 155 R-----LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred C-----ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 0 11234789999999987654 468999999999999999999888854322111000 000000
Q ss_pred -Hhh------hhcC-----CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 626 -ILD------AQAG-----DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 626 -~ld------~~~~-----~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.+ .... ......+..+.+++.+|+..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 278 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence 000 0000 001134578999999999999999999985
No 295
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=9.1e-34 Score=300.54 Aligned_cols=249 Identities=20% Similarity=0.318 Sum_probs=191.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
+|+...+||.|++|.||+|++. +..||||++..... .....+.+|+.++++++||||+++++++.+. .++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5778899999999999999985 66899999875532 2345678899999999999999999998654 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++ +|.+++........+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 84 88888876554456899999999999999999999987 99999999999999999999999999976543211
Q ss_pred ccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc---------hhhHHHHhh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID---------EDNLAEILD 628 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~---------~~~l~~~ld 628 (757)
......+++.|++||++.+ ..++.++|||||||++|+|+||++||......+.... ...+..+.+
T Consensus 156 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 -----TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred -----ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence 1123467899999998755 3578999999999999999999999964432211100 000000000
Q ss_pred --hhcCC-----------CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 --AQAGD-----------WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 --~~~~~-----------~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..... .....+..+.+++.+|++.+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 277 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHD 277 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHH
Confidence 00000 11123567889999999999999999875
No 296
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.9e-34 Score=301.41 Aligned_cols=248 Identities=26% Similarity=0.372 Sum_probs=192.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|+....||.|+||.||+|.+. +..||+|++.... ......+.+|++++++++||||+++++++.+.. ++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5788889999999999999885 4589999886532 233467899999999999999999999986543 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
++++.|..++... ..+++..+..++.+|+.||.|||..+ ++||||+|+||+++.++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 82 VERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9987776554332 24889999999999999999999988 99999999999999999999999999987654332
Q ss_pred CccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHH--------HHhh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLA--------EILD 628 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~--------~~ld 628 (757)
. ......++..|+|||++.+. .++.++||||||+++|+|++|++||................ ....
T Consensus 156 ~-----~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 156 S-----PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred c-----cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 0 11335788999999998887 78999999999999999999999996443222111000000 0000
Q ss_pred ------------hh-----cCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 ------------AQ-----AGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 ------------~~-----~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.. ...++...+..+.+++.+||..+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 281 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDE 281 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHH
Confidence 00 00122234788999999999999999999875
No 297
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.3e-33 Score=300.78 Aligned_cols=248 Identities=20% Similarity=0.324 Sum_probs=187.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
++|.....||.|+||.||+|... ++.||||.+..... .....+.+|++++++++||||+++++++.+.. ++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 46888889999999999999874 57899999865432 22345778999999999999999999987554 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+. ++|.+++..... .+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~-~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LD-TDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CC-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 98 489998865432 5889999999999999999999988 99999999999999999999999999875432111
Q ss_pred CccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc----------hhhHHHH
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID----------EDNLAEI 626 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~----------~~~l~~~ 626 (757)
......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.........+. ...+...
T Consensus 159 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred ------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhh
Confidence 1122357889999998765 4588999999999999999999999964431111110 0000000
Q ss_pred hhh------hcCC----------CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 627 LDA------QAGD----------WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 627 ld~------~~~~----------~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
... .... ........+.+++.+||+.+|.+||++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e 284 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAE 284 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHH
Confidence 000 0000 00111267889999999999999999875
No 298
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.2e-33 Score=297.88 Aligned_cols=243 Identities=22% Similarity=0.327 Sum_probs=189.8
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc----------hhhHHHHHHHHHHHhcCCCceeeecccccCC-
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN----------IQNKQFLQELEVLSKIRHPHLLLLLGACPDH- 470 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~----------~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~- 470 (757)
+|.....||.|+||.||+|... +..+|+|.+..... ...+.+.+|+.+++.++|||++++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4566778999999999999764 56899998753211 0124578899999999999999999998654
Q ss_pred -ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 471 -GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence 38999999999999998654 35888999999999999999999987 999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccCC--CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL--ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL 627 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l 627 (757)
........ ........|+..|+|||++.... ++.++|+||||+++|+|++|..||.......... +..
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~------~~~ 225 (272)
T cd06629 156 KKSDDIYD----NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF------KLG 225 (272)
T ss_pred cccccccc----ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH------Hhh
Confidence 76543211 11123456899999999887654 7899999999999999999999996433222111 111
Q ss_pred hh-hcCCC----ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 628 DA-QAGDW----PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 628 d~-~~~~~----p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.. ..... ....+..+.+++.+||..+|.+||++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 265 (272)
T cd06629 226 NKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARE 265 (272)
T ss_pred ccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHH
Confidence 00 01111 1234678999999999999999999875
No 299
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-33 Score=298.70 Aligned_cols=244 Identities=26% Similarity=0.375 Sum_probs=188.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHH-HHhcCCCceeeecccccCCc--eEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEV-LSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~i-l~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
++|+....||+|+||.||+|.+. +..||+|.+..... .....+..|+.+ ++.++||||+++++++.+.. ++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999985 56999999875432 233456667776 55678999999999985543 89999
Q ss_pred ecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 477 YMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNT-KPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 477 y~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|++ |+|.+++... .....+++..+..++.||+.||.|||+. + ++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 6888877642 2335689999999999999999999986 5 99999999999999999999999999986543
Q ss_pred CCCCccccccccCCcccccCCCcccccc----CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRT----GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ 630 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~ 630 (757)
.. ..+...|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||...... ...+...+...
T Consensus 157 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 224 (283)
T cd06617 157 SV-------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-----FQQLKQVVEEP 224 (283)
T ss_pred cc-------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-----HHHHHHHHhcC
Confidence 21 1123468899999998754 44688999999999999999999999532111 11122222221
Q ss_pred cCCCC-hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 631 AGDWP-IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 631 ~~~~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....| ...+..+.+++.+||..+|.+||++.+
T Consensus 225 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~ 257 (283)
T cd06617 225 SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPE 257 (283)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHH
Confidence 12222 234678999999999999999999975
No 300
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.1e-33 Score=299.87 Aligned_cols=247 Identities=20% Similarity=0.318 Sum_probs=188.8
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
|+....||.|++|.||+|.+. +..||+|++.... ......+.+|+++++.++|||++++++++.+.. ++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 556778999999999999874 6799999987543 223356889999999999999999999986554 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
+ ++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 5 689998865442 35899999999999999999999987 99999999999999999999999999976543211
Q ss_pred ccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch---------h------h
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE---------D------N 622 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~---------~------~ 622 (757)
......+++.|+|||++.+. .++.++||||||+++|+|+||++||............ . .
T Consensus 155 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred -----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 11233678999999987654 5789999999999999999999999644332111000 0 0
Q ss_pred HHHHhhh-------hcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 623 LAEILDA-------QAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 623 l~~~ld~-------~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.+.... .........+..+.+++.+|++.+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 276 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKA 276 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 0000000 000111234577899999999999999999875
No 301
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.5e-33 Score=303.71 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=189.2
Q ss_pred CccceeeccCCcEEEEEEEEC----CeEEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCC----ceE
Q 004388 405 FSENLRIGMGGYGTVYKGTFH----HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCL 473 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~----~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~L 473 (757)
|....+||.|+||.||+|... +..||+|.+.... ......+.+|+.++.+++||||++++++|.+. .++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 677788999999999999984 4699999988633 33446678899999999999999999998655 389
Q ss_pred EEEecCCCCHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC----CCceEEeeec
Q 004388 474 VYEYMENGSLEDRLYRKN--NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH----NLVSKIGDVG 547 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~----~~~~KL~DFG 547 (757)
||||+++ +|.+.+.... ....++...+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999975 6766664322 2236888999999999999999999988 999999999999999 9999999999
Q ss_pred CccccCCCCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhh---hhhchhhH
Q 004388 548 LSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVE---TAIDEDNL 623 (757)
Q Consensus 548 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~l 623 (757)
++......... ........+|+.|+|||++.+. .++.++|||||||++|+|++|++||....... .......+
T Consensus 158 ~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T cd07842 158 LARLFNAPLKP---LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234 (316)
T ss_pred cccccCCCccc---ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHH
Confidence 99876543221 1122345789999999987654 57899999999999999999999996332211 00000011
Q ss_pred HHHhh------------------------hh-cCCCC-----------hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 624 AEILD------------------------AQ-AGDWP-----------IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 624 ~~~ld------------------------~~-~~~~p-----------~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..++. .. ....+ ...+..+.+++.+||+.+|++||++.+
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~e 309 (316)
T cd07842 235 ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEE 309 (316)
T ss_pred HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence 11100 00 00111 034467899999999999999999875
No 302
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.2e-33 Score=299.38 Aligned_cols=250 Identities=22% Similarity=0.351 Sum_probs=188.7
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
++.+|...+.||+|+||.||+|... +..||+|++..... .....+.+|+.+++.++||||+++++++.+.. ++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4568889999999999999999874 67999999865432 22346788999999999999999999986553 8999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+. ++|.+.+.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9996 67777665433 34778888999999999999999987 999999999999999999999999999764322
Q ss_pred CCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchh---------hHHH
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDED---------NLAE 625 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~---------~l~~ 625 (757)
.. ......+++.|+|||++.+. .++.++|||||||++|+|+||++||.........+... ....
T Consensus 157 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 157 SQ------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred CC------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 11 11234678999999988653 57889999999999999999999996433221111000 0000
Q ss_pred Hh---hhhcCC-------------C-ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 626 IL---DAQAGD-------------W-PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 626 ~l---d~~~~~-------------~-p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+ ...... | .......+.+++.+|+..+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~ 284 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQD 284 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHH
Confidence 00 000000 0 0122567899999999999999999975
No 303
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=314.14 Aligned_cols=239 Identities=24% Similarity=0.397 Sum_probs=195.4
Q ss_pred ceeeccCCcEEEEEEEECCe--EEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeeccccc--CCceEEEEecCCCCH
Q 004388 408 NLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACP--DHGCLVYEYMENGSL 483 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~--~~~~LV~Ey~~~gsL 483 (757)
...||.|+||.||++..+.+ ..|-|++........++|+-||+||..+.||+||+|+++|. ....+..|||.||-.
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAV 116 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAV 116 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchH
Confidence 34589999999999988765 56888888777778889999999999999999999999763 344788999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
+.++..-+. +|...++..++.|++.||.|||+.+ |||||||..|||++.+|.++|+|||.+.... .+..
T Consensus 117 DaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~------~t~q 185 (1187)
T KOG0579|consen 117 DAIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNK------STRQ 185 (1187)
T ss_pred hHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccch------hHHh
Confidence 888776553 5899999999999999999999998 9999999999999999999999999875432 2334
Q ss_pred cccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh--hhcCCCCh
Q 004388 564 KNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD--AQAGDWPI 636 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld--~~~~~~p~ 636 (757)
+...+.|||+|||||+.. ..+|+.++|||||||+|.||..+.||..-.+.....+ .+-. +...-.|.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll------KiaKSePPTLlqPS 259 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL------KIAKSEPPTLLQPS 259 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH------HHhhcCCCcccCcc
Confidence 556789999999999754 4579999999999999999999999975333322211 1111 11112355
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
..+..+.+++.+||..+|..||+..+.
T Consensus 260 ~Ws~~F~DfLk~cL~Knp~~Rp~aaql 286 (1187)
T KOG0579|consen 260 HWSRSFSDFLKRCLVKNPRNRPPAAQL 286 (1187)
T ss_pred hhhhHHHHHHHHHHhcCCccCCCHHHH
Confidence 678899999999999999999998853
No 304
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.8e-33 Score=301.37 Aligned_cols=254 Identities=17% Similarity=0.199 Sum_probs=180.9
Q ss_pred cCCccceeeccCCcEEEEEEEECCe-----EEEEEEEccCCchhh-----------HHHHHHHHHHHhcCCCceeeeccc
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHHT-----FAAVKVLQSKGNIQN-----------KQFLQELEVLSKIRHPHLLLLLGA 466 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~~-----~vAvK~l~~~~~~~~-----------~~f~~Ev~il~~l~Hpniv~l~g~ 466 (757)
..|...++||+|+||.||+|...++ .+|+|+......... .....+...+..+.|+|++.++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4688889999999999999987544 567776443322111 112233445566789999999987
Q ss_pred ccCCc------eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 467 CPDHG------CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 467 ~~~~~------~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
+.... +++++++. .++.+.+... ...++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 64322 56777764 4676665432 23577888999999999999999987 999999999999999999
Q ss_pred eEEeeecCccccCCCCCCcc-ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh-
Q 004388 541 SKIGDVGLSTMLNSDPSFVS-TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI- 618 (757)
Q Consensus 541 ~KL~DFGla~~~~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~- 618 (757)
+||+|||+|+.+........ .........||+.|+|||++.+..++.++|||||||++|||+||++||.........+
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987653221111 0111233479999999999999999999999999999999999999996442111111
Q ss_pred --chhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhh
Q 004388 619 --DEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLP 666 (757)
Q Consensus 619 --~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~ 666 (757)
..+.+..+..... .+...+..+.+++..|+.++|.+||++.+ +.+
T Consensus 245 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~-l~~ 291 (294)
T PHA02882 245 AAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDA-LIK 291 (294)
T ss_pred HhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHH-HHH
Confidence 1111122211111 12234678999999999999999999984 443
No 305
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.8e-33 Score=301.31 Aligned_cols=240 Identities=26% Similarity=0.395 Sum_probs=189.0
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~ 475 (757)
..|.....||.|+||.||+|... +..||+|++..... .....+.+|+++++.++||||++++++|.+. .++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 34777789999999999999874 67899998864322 2335688999999999999999999998654 38999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+. |+|.+.+.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 67777665433 25899999999999999999999988 999999999999999999999999998765432
Q ss_pred CCCccccccccCCcccccCCCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQR---TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAG 632 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~ 632 (757)
....|++.|+|||++. .+.++.++||||||+++|+|+||++||......... ..+......
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~------~~~~~~~~~ 232 (307)
T cd06607 169 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQNDSP 232 (307)
T ss_pred ----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH------HHHhcCCCC
Confidence 2346888999999874 456889999999999999999999998644322211 111111111
Q ss_pred C-CChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 633 D-WPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 633 ~-~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
. .+...+..+.+++.+||..+|.+||++.+++
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 265 (307)
T cd06607 233 TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELL 265 (307)
T ss_pred CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 1 1223466899999999999999999998643
No 306
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3e-33 Score=290.35 Aligned_cols=246 Identities=24% Similarity=0.376 Sum_probs=200.6
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCC----ceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~LV~ 475 (757)
+|...+.||+|++|.||+|... +..+++|++..... ...+.+.+|+.++++++||||+++++.+.+. .++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999986 67899999876543 3466789999999999999999999998665 37999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+++++|.+++.... .+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999987544 6899999999999999999999987 999999999999999999999999999877654
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh-hhcCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD-AQAGDW 634 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld-~~~~~~ 634 (757)
... .......++..|++||++.+..++.++||||||+++++|++|..||........ .+..+.. ......
T Consensus 155 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~ 225 (260)
T cd06606 155 ETG----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA-----ALYKIGSSGEPPEI 225 (260)
T ss_pred ccc----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-----HHHhccccCCCcCC
Confidence 321 012345789999999999888899999999999999999999999965431111 1111111 112234
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
|...+..+.+++.+|+..+|.+||++.+.+
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll 255 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELL 255 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHh
Confidence 445578999999999999999999998633
No 307
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.4e-33 Score=292.69 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=193.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-----chhhHHHHHHHHHHHhcCCCceeeecccccCC----c
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-----NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----G 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-----~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~ 471 (757)
.+|...+.||+|+||.||+|.+. +..+|+|.+.... ......|.+|++++++++||||+++++++.+. .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47888899999999999999874 5689999875431 22345788999999999999999999988543 3
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||+++++|.+++...+ .+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence 78999999999999886543 3788899999999999999999988 99999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh-hh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD-AQ 630 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld-~~ 630 (757)
...... .........|+..|+|||++.+..++.++|+|||||++|+|++|++||........ +..... +.
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~ 226 (264)
T cd06653 156 IQTICM---SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA------IFKIATQPT 226 (264)
T ss_pred cccccc---cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH------HHHHHcCCC
Confidence 542111 00111335689999999999888889999999999999999999999964322211 111111 11
Q ss_pred cCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 631 AGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 631 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....|......+.+++.+||. +|..||+..+
T Consensus 227 ~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~ 257 (264)
T cd06653 227 KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEF 257 (264)
T ss_pred CCCCCcccCHHHHHHHHHHhc-CcccCccHHH
Confidence 223455677889999999999 5799999874
No 308
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3e-33 Score=292.17 Aligned_cols=238 Identities=27% Similarity=0.319 Sum_probs=190.9
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSL 483 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL 483 (757)
||.|+||.||++.+. +..+++|++..... .....+.+|+.++.+++||||+++++.+.+.. |+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 66999999876543 34566889999999999999999999886544 899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC--ccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF--VST 561 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~--~~~ 561 (757)
.+++.+.+ .+++..+..|+.||+.||.|||..+ ++||||+|+||+++.++.++|+|||++......... ...
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99987644 5899999999999999999999988 999999999999999999999999998765432110 000
Q ss_pred cccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhH--H
Q 004388 562 TYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKE--T 639 (757)
Q Consensus 562 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~--~ 639 (757)
........++..|++||+.....++.++||||||+++|+|+||+.||....... .... +......+|... +
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~-~~~~~~~~~~~~~~~ 227 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE------IFQN-ILNGKIEWPEDVEVS 227 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHH-HhcCCcCCCccccCC
Confidence 112234568899999999988889999999999999999999999996443211 1111 111223344444 7
Q ss_pred HHHHHHHHHHhhccCCCCCccc
Q 004388 640 KELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 640 ~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
..+.+++.+||+.+|.+||++.
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~~ 249 (265)
T cd05579 228 DEAIDLISKLLVPDPEKRLGAK 249 (265)
T ss_pred HHHHHHHHHHhcCCHhhcCCCc
Confidence 8899999999999999999995
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2e-33 Score=299.87 Aligned_cols=249 Identities=24% Similarity=0.294 Sum_probs=189.8
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccC----CceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPD----HGCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~----~~~LV 474 (757)
.+|.....||.|+||.||+|.+. ++.+++|.+..... .....+.+|+.++.+++||||+++++++.+ ..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 36778889999999999999986 56899998865432 223456789999999999999999998753 34899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+. ++|.+++..... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+..
T Consensus 85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 599998865432 5899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch---------hhHH
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE---------DNLA 624 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~---------~~l~ 624 (757)
... ......+++.|+|||++.+. .++.++|+||||+++|+|++|.+||............ ..+.
T Consensus 159 ~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 159 PLK------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred Ccc------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 321 11234678999999987654 4689999999999999999999999643221110000 0000
Q ss_pred HH--hhh-------------hcCCCChh-HHHHHHHHHHHHhhccCCCCCccchh
Q 004388 625 EI--LDA-------------QAGDWPIK-ETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 625 ~~--ld~-------------~~~~~p~~-~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
.. +.. .....+.. .+..+.+++.+||..+|++||++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~el 287 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDA 287 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHH
Confidence 00 000 00111111 36778999999999999999998853
No 310
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.1e-33 Score=297.07 Aligned_cols=244 Identities=24% Similarity=0.301 Sum_probs=191.7
Q ss_pred CCccceeeccCCcEEEEEEEE-----CCeEEEEEEEccCC----chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--
Q 004388 404 SFSENLRIGMGGYGTVYKGTF-----HHTFAAVKVLQSKG----NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG-- 471 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~-----~~~~vAvK~l~~~~----~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~-- 471 (757)
+|+....||.|+||.||++.. ++..||+|++.... ....+.+.+|+.+|.++ +||||+.+++++....
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467788999999999999986 46789999987532 22345678899999999 5999999998886554
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||+++++|.+++.... ++++.....++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 79999999999999986543 4788889999999999999999987 99999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccC--CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG--LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
....... ......|+..|+|||++..+ .++.++||||||+++|+|+||..||....... ....+...+..
T Consensus 155 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~---~~~~~~~~~~~ 226 (290)
T cd05613 155 FHEDEVE-----RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN---SQAEISRRILK 226 (290)
T ss_pred ccccccc-----ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc---cHHHHHHHhhc
Confidence 5432211 11234689999999988653 46789999999999999999999996322110 01111222222
Q ss_pred hcCCCChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 630 QAGDWPIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 630 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
....+|...+..+.+++.+|+..+|.+||+..
T Consensus 227 ~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~ 258 (290)
T cd05613 227 SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCG 258 (290)
T ss_pred cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 23345556778899999999999999998643
No 311
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-34 Score=307.00 Aligned_cols=244 Identities=25% Similarity=0.315 Sum_probs=188.0
Q ss_pred cCCccceeeccCCcEEEEEEEEC-CeEEEEEEEcc--CCchhhHHHHHHHHHHHhcC-CCceeeecccccCC--ceEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQS--KGNIQNKQFLQELEVLSKIR-HPHLLLLLGACPDH--GCLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~--~~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~--~~LV~E 476 (757)
..|+..++||+||.+.||++... .+.||+|.... ........|.+|+..|.+|. |.+||.||+|-... .|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 34788889999999999999875 45777775443 34556678999999999995 99999999986443 389999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|-+ .+|..+|.++... ...| .+..+..|++.++.++|.++ |||.||||.|+|+- .|.+||+|||+|..+..+.
T Consensus 441 ~Gd-~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ccc-ccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence 864 6899988765543 2335 56678999999999999988 99999999999995 4689999999999887653
Q ss_pred CCccccccccCCcccccCCCccccccC-----------CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHH
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTG-----------LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAE 625 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~ 625 (757)
+.......+||+.||+||.+... +.+.++||||||||||+|+.|++||+...... ..+..
T Consensus 514 ----TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~-----aKl~a 584 (677)
T KOG0596|consen 514 ----TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI-----AKLHA 584 (677)
T ss_pred ----cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH-----HHHHh
Confidence 23334567999999999976422 26789999999999999999999997433222 23445
Q ss_pred Hhhhhc-CCCChh-HHHHHHHHHHHHhhccCCCCCccch
Q 004388 626 ILDAQA-GDWPIK-ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 626 ~ld~~~-~~~p~~-~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.++.. -++|.- ...++.+++..||..||++||+..+
T Consensus 585 I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~e 623 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPE 623 (677)
T ss_pred hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHH
Confidence 555532 122221 1233999999999999999999875
No 312
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-33 Score=303.06 Aligned_cols=241 Identities=24% Similarity=0.309 Sum_probs=191.0
Q ss_pred CCccceeeccCCcEEEEEEEECCe--EEEEEEEccCCchhhH---HHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGNIQNK---QFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~~~~~---~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
-|...+.||-|+||.|.+++-..| .||+|.|++.....+. ....|-+||..-+.+.||+||..|+|.. |+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 477778899999999999876544 8899998876544333 4577999999999999999999998765 88999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC--
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS-- 554 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~-- 554 (757)
|++||++..+|.+.+- +++.....++.++..|+++.|..| +|||||||+|||||.+|++||+|||||.-+.-
T Consensus 710 YIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecc
Confidence 9999999999988764 777777888899999999999988 99999999999999999999999999974421
Q ss_pred CCCCc----------------------------------cccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHH
Q 004388 555 DPSFV----------------------------------STTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQ 600 (757)
Q Consensus 555 ~~~~~----------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~e 600 (757)
+..+. .........+||+.|+|||++....|+..+|+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 00000 00011234589999999999999999999999999999999
Q ss_pred HHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHH-Hhhcc
Q 004388 601 LLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLS-CAELR 653 (757)
Q Consensus 601 lltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~-Cl~~~ 653 (757)
|+.|++||......+......++...|+-. +..+.+.+..+||.+ |+..+
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~~---~~~~ls~e~~~li~kLc~sad 914 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHIP---YQGNLSKEALDLIQKLCCSAD 914 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccccc---cccccCHHHHHHHHHHhcChh
Confidence 999999998776666666666666666532 223456666777765 55433
No 313
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6.6e-33 Score=288.00 Aligned_cols=241 Identities=29% Similarity=0.456 Sum_probs=198.0
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||.|+||.||++... +..|++|.+..... .....+.+|++++++++|||++++++++.+.. ++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 3667789999999999999875 46899999876643 34567899999999999999999999886544 799999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999988654 35899999999999999999999987 99999999999999999999999999987664332
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
. .....|+..|+|||+..+..++.++||||||+++|+|++|+.||........ +...........+..
T Consensus 155 ~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~ 222 (254)
T cd06627 155 D------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA------LFRIVQDDHPPLPEG 222 (254)
T ss_pred c------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHhccCCCCCCCC
Confidence 1 1334689999999998888889999999999999999999999964332111 112221222334445
Q ss_pred HHHHHHHHHHHHhhccCCCCCccch
Q 004388 638 ETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..+.+++.+||..+|.+||++.+
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~ 247 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQ 247 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHH
Confidence 6788999999999999999999875
No 314
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=5.9e-33 Score=288.48 Aligned_cols=244 Identities=28% Similarity=0.459 Sum_probs=199.5
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|.....||.|+||.||++.+. +..+++|++..... .....+.+|+++++.++|||++++++.+.+.. ++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4677788999999999999986 66999999876533 45567889999999999999999998875544 799999
Q ss_pred cCCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 478 MENGSLEDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 478 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
+++++|.+++.... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999887642 2356899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
. ......|++.|+|||++....++.++|+||||+++++|++|+.||...... ..............|.
T Consensus 158 ~------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~ 225 (258)
T cd08215 158 D------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKILKGQYPPIPS 225 (258)
T ss_pred c------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHHhcCCCCCCCC
Confidence 1 123347899999999988888999999999999999999999998643211 1111222222233444
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+..+.+++.+||..+|.+||++.+
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ 251 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQ 251 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 56788999999999999999999985
No 315
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=7.3e-33 Score=293.09 Aligned_cols=244 Identities=23% Similarity=0.379 Sum_probs=184.8
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcC-CCceeeecccccCC----ceEEEE
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIR-HPHLLLLLGACPDH----GCLVYE 476 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~----~~LV~E 476 (757)
|....+||.|+||.||+|... +..+|+|.+.... ........+|+.++.++. |||++++++++.+. .++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 456778999999999999874 5689999987542 222234557999999985 99999999998654 389999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|++ |+|.+.+.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++. +.+||+|||++..+....
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 997 58888776533 35899999999999999999999988 999999999999999 999999999998765332
Q ss_pred CCccccccccCCcccccCCCccccc-cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc--------hhhHHHHh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQR-TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID--------EDNLAEIL 627 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~--------~~~l~~~l 627 (757)
.. ....+++.|+|||++. ++.++.++|||||||++|+|++|.+||...+..+.... ...+...+
T Consensus 154 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 154 PY-------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred Cc-------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence 11 2346789999999764 45678999999999999999999999964432221000 00000000
Q ss_pred hhh-c--CCC-----------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 628 DAQ-A--GDW-----------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 628 d~~-~--~~~-----------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
... . ..+ ....+..+.+++.+||..+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 275 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQ 275 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHH
Confidence 000 0 001 1134688999999999999999999875
No 316
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.2e-33 Score=306.23 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=189.3
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCC-------c
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-------G 471 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-------~ 471 (757)
+.+|....+||+|+||.||+|.+. +..||||++.... ......+.+|+.++++++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 467889999999999999999874 5689999986432 23445688899999999999999999886432 3
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||+. ++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence 79999996 588777643 24889999999999999999999988 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh------h---chh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA------I---DED 621 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~------~---~~~ 621 (757)
......... ......||+.|+|||.+.+ ..++.++|||||||++|+|+||++||...+..... + ..+
T Consensus 156 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 156 ADPEHDHTG---FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred ccccccccC---CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 643321111 1234578999999997654 56889999999999999999999999643221110 0 001
Q ss_pred hHHHHhhhhc----------CC--C---ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 622 NLAEILDAQA----------GD--W---PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 622 ~l~~~ld~~~----------~~--~---p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+..+.+... .. + ....+..+.+++.+||+.+|.+||++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e 288 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEE 288 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHH
Confidence 1111111000 00 0 0123567899999999999999999985
No 317
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.5e-33 Score=344.86 Aligned_cols=249 Identities=27% Similarity=0.438 Sum_probs=193.7
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
..|.....||+|+||.||+|.. .+..||||.+...... ...|++++++++|||||+++|+|.+.. ++||||+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~ 765 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI 765 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence 4567778899999999999986 4679999988643321 235689999999999999999996544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++|+|.+++. .++|..+.+|+.||+.||.|||.....+|+||||||+|||++.++..++. ||........
T Consensus 766 ~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--- 835 (968)
T PLN00113 766 EGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--- 835 (968)
T ss_pred CCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC---
Confidence 9999999984 28899999999999999999997655669999999999999999988876 7765443211
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccch--------hhhhhchhhHHHHhhhh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHK--------VETAIDEDNLAEILDAQ 630 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~--------~~~~~~~~~l~~~ld~~ 630 (757)
....||+.|+|||++.+..++.++|||||||++|||+||+.||..... .............+|+.
T Consensus 836 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (968)
T PLN00113 836 -------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPS 908 (968)
T ss_pred -------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCcc
Confidence 223689999999999999999999999999999999999999853211 11111122223333433
Q ss_pred cC---CCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHHH
Q 004388 631 AG---DWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLKE 673 (757)
Q Consensus 631 ~~---~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~~ 673 (757)
.. ..+.....++.+++.+||+.+|.+||++. +|+..|+.+..
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~-evl~~L~~~~~ 953 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCAN-DVLKTLESASR 953 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHH-HHHHHHHHhhc
Confidence 21 22345567789999999999999999998 46677766543
No 318
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.3e-33 Score=296.55 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=188.5
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcC-CCceeeecccccC--C-----
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIR-HPHLLLLLGACPD--H----- 470 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~--~----- 470 (757)
++|.....||.|+||.||+|.+. +..||||++..... .....+.+|+.+++.+. ||||+++++++.. .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36788889999999999999985 56899998765432 23456888999999995 6999999998743 2
Q ss_pred ceEEEEecCCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-CCceEEeeec
Q 004388 471 GCLVYEYMENGSLEDRLYRKNN--TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-NLVSKIGDVG 547 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-~~~~KL~DFG 547 (757)
.++||||+++ +|.+++..... ...+++..+..++.||+.||.|||..+ |+||||||+|||++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 3899999985 88888765432 346899999999999999999999987 999999999999998 8999999999
Q ss_pred CccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHH
Q 004388 548 LSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEI 626 (757)
Q Consensus 548 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ 626 (757)
++..+..... ......+++.|+|||++.+ ..++.++||||||+++|+|+||.+||........... +...
T Consensus 157 ~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~---~~~~ 227 (295)
T cd07837 157 LGRAFSIPVK------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH---IFKL 227 (295)
T ss_pred cceecCCCcc------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH---HHHH
Confidence 9976543211 1123367889999998754 4578999999999999999999999964433221110 0000
Q ss_pred hh-hh---------------cCC--------CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 627 LD-AQ---------------AGD--------WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 627 ld-~~---------------~~~--------~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+. +. ... .....+..+.+++.+||..+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 228 LGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred hCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 00 00 000 01134677899999999999999999875
No 319
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.2e-33 Score=297.25 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=187.7
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC--------
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-------- 470 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-------- 470 (757)
++|....+||.|+||.||+|... +..||||.+.... ......+.+|+.++++++||||++++++|...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46888999999999999999875 5699999886432 22234567899999999999999999987432
Q ss_pred --ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 471 --GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 471 --~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
.++||||+. ++|.+.+.... ..+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 289999996 58888775433 35899999999999999999999987 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhH----
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNL---- 623 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l---- 623 (757)
+..+....... ........++..|+|||++.+. .++.++||||||+++|+|+||++||..............+
T Consensus 166 ~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 166 ARAFSLSKNSK--PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred cccccCCcccC--CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 98765432211 1112345678999999987654 4788999999999999999999998643321110000000
Q ss_pred ----------HHHhhhhc-C----------CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 624 ----------AEILDAQA-G----------DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 624 ----------~~~ld~~~-~----------~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
....+... . .++......+.+++.+||..+|.+||++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e 303 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADT 303 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHH
Confidence 00000000 0 011123456789999999999999999875
No 320
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.1e-32 Score=298.46 Aligned_cols=236 Identities=27% Similarity=0.416 Sum_probs=187.4
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEe
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEY 477 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey 477 (757)
|.....||+|+||.||+|... +..+|+|++..... .....+.+|+.++++++|||+++++++|.+. .++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666778999999999999874 56899999864322 2335688999999999999999999998654 3899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+. |+|.+.+.... .++++..+..++.+++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 107 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 97 57877775433 35899999999999999999999988 999999999999999999999999998754422
Q ss_pred CccccccccCCcccccCCCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC-
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQR---TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD- 633 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~- 633 (757)
....|++.|+|||++. .+.++.++|||||||++|+|++|++||....... .+..+.......
T Consensus 179 --------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~ 244 (317)
T cd06635 179 --------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNESPTL 244 (317)
T ss_pred --------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHhccCCCC
Confidence 2346889999999873 4568899999999999999999999986432111 111222211111
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+...+..+.+++.+||+.+|.+||++.+
T Consensus 245 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 273 (317)
T cd06635 245 QSNEWSDYFRNFVDSCLQKIPQDRPTSEE 273 (317)
T ss_pred CCccccHHHHHHHHHHccCCcccCcCHHH
Confidence 12245677999999999999999999985
No 321
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.4e-33 Score=295.19 Aligned_cols=232 Identities=24% Similarity=0.315 Sum_probs=178.4
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHh---cCCCceeeecccccCC--ceEEEEecC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSK---IRHPHLLLLLGACPDH--GCLVYEYME 479 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~---l~Hpniv~l~g~~~~~--~~LV~Ey~~ 479 (757)
.||+|+||.||++... ++.+|+|.+..... .....+.+|..++.. .+||||+.+++++... .++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 3899999999999874 56999998865422 122334455544443 4799999999988543 489999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+|+|.+++...+ .+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 999999886543 4899999999999999999999988 9999999999999999999999999987554221
Q ss_pred cccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhH
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKE 638 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~ 638 (757)
.....||+.|+|||.+.+ ..++.++|||||||++|+|+||..||....... ...+...........|...
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~ 222 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLTVNVELPDSF 222 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC----HHHHHHHhhcCCcCCcccc
Confidence 123468999999998764 458899999999999999999999996332111 0111111111112334456
Q ss_pred HHHHHHHHHHHhhccCCCCCc
Q 004388 639 TKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs 659 (757)
+..+.+++.+||..+|.+||+
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcC
Confidence 788999999999999999996
No 322
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1e-32 Score=291.24 Aligned_cols=235 Identities=21% Similarity=0.241 Sum_probs=180.9
Q ss_pred hcCCccceee--ccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccccCC--ceEE
Q 004388 402 TLSFSENLRI--GMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACPDH--GCLV 474 (757)
Q Consensus 402 t~~f~~~~~I--G~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~--~~LV 474 (757)
.++|...+.+ |.|+||.||++... +..+|+|++....... .|+.+...+ +||||+++++.|... .++|
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv 87 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLI 87 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence 3455555555 99999999999875 4589999886532211 133333322 699999999998544 4899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC-ceEEeeecCccccC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-VSKIGDVGLSTMLN 553 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-~~KL~DFGla~~~~ 553 (757)
|||+++|+|.+++.... ++++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 88 MDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred EEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 99999999999886543 6899999999999999999999988 99999999999999998 99999999987654
Q ss_pred CCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD 633 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~ 633 (757)
.. ....|+..|+|||++.+..++.++|||||||++|+|+||+.||...... .+....+..... ....
T Consensus 162 ~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~-~~~~ 228 (267)
T PHA03390 162 TP----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE--ELDLESLLKRQQ-KKLP 228 (267)
T ss_pred CC----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc--hhhHHHHHHhhc-ccCC
Confidence 32 2236899999999998888999999999999999999999999633211 111111222221 1112
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCcc
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
.+...+..+.+++.+||+.+|.+||+.
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~R~~~ 255 (267)
T PHA03390 229 FIKNVSKNANDFVQSMLKYNINYRLTN 255 (267)
T ss_pred cccccCHHHHHHHHHHhccChhhCCch
Confidence 233567899999999999999999964
No 323
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.5e-33 Score=311.06 Aligned_cols=192 Identities=25% Similarity=0.363 Sum_probs=164.8
Q ss_pred CCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcC-C-----Cceeeecccc--cCCceE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIR-H-----PHLLLLLGAC--PDHGCL 473 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-H-----pniv~l~g~~--~~~~~L 473 (757)
.|.+...||+|+||.|.+|.+.+ ..||||+++..... ..+-..|+.||..|+ | -|+|+++++| .++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH-HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 67888999999999999999875 49999999876432 344567999999997 3 4899999987 567799
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC--CceEEeeecCccc
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN--LVSKIGDVGLSTM 551 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~--~~~KL~DFGla~~ 551 (757)
|+|.+. .+|.++|..+. ..+++...+..|+.||+.||.+||..+ |||+||||+||||.+. ..+||+|||+|..
T Consensus 266 VfELL~-~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhhh-hhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence 999995 69999887654 456999999999999999999999988 9999999999999653 4789999999998
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccc
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAI 610 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~ 610 (757)
..... ...+.+..|.|||++.+.+|+.+.||||||||++||+||.|-|..
T Consensus 341 ~~q~v---------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 341 ESQRV---------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred cCCcc---------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 66432 134778999999999999999999999999999999999888763
No 324
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3e-33 Score=297.67 Aligned_cols=245 Identities=27% Similarity=0.337 Sum_probs=186.1
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcC-CCceeeecccccCC--ceEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIR-HPHLLLLLGACPDH--GCLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~--~~LV~Ey 477 (757)
+|.....||.|+||.||++.+. +..+|+|.+.... ......+.+|+.++.++. ||||+++++++.+. .+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3444567999999999999885 5689999886543 234556889999999996 99999999988544 3789999
Q ss_pred cCCCCHHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 478 MENGSLEDRLYR--KNNTPPIPWFERYRIAWEVASALAFLHNT-KPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 478 ~~~gsL~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
+. ++|.++... ......+++.....++.+++.||.|||+. + |+||||||+|||++.++.+||+|||++..+..
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 86 466554321 11224589999999999999999999975 5 99999999999999999999999999976543
Q ss_pred CCCCccccccccCCcccccCCCccccccC---CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTG---LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA 631 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~ 631 (757)
... .....|++.|+|||++.+. .++.++|||||||++|+|++|++||....... ..+........
T Consensus 161 ~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~ 228 (288)
T cd06616 161 SIA-------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF-----DQLTQVVKGDP 228 (288)
T ss_pred CCc-------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH-----HHHhhhcCCCC
Confidence 221 1233689999999988766 68999999999999999999999996432111 11111111111
Q ss_pred ----CCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 632 ----GDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 632 ----~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
...+...+..+.+|+.+||..+|.+||++.+++
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~ 265 (288)
T cd06616 229 PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELL 265 (288)
T ss_pred CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 111224677899999999999999999998533
No 325
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.2e-33 Score=298.63 Aligned_cols=251 Identities=19% Similarity=0.203 Sum_probs=188.3
Q ss_pred ceeeccCCcEEEEEEEECCeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCH
Q 004388 408 NLRIGMGGYGTVYKGTFHHTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSL 483 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL 483 (757)
.+.+|.|+++.||++...+..||||++... .......+.+|+.+++.++||||+++++++.+.. +++|||+++|+|
T Consensus 7 ~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 7 GKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred hHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 344567777888888878889999998754 2334567899999999999999999999986543 899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC-cccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF-VSTT 562 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~-~~~~ 562 (757)
.+++..... ..+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||.+..+...... ....
T Consensus 87 ~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 87 EDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 998875432 34888899999999999999999988 999999999999999999999999998765432211 0111
Q ss_pred ccccCCcccccCCCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch--hhHHHHhh----------
Q 004388 563 YKNTGPVGTLCYIDPEYQRT--GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE--DNLAEILD---------- 628 (757)
Q Consensus 563 ~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~--~~l~~~ld---------- 628 (757)
.......++..|+|||++.. ..++.++|||||||++|+|++|+.||............ +.....++
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 11234467889999998865 35889999999999999999999999744322211110 00000000
Q ss_pred ----------h-----hcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 629 ----------A-----QAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 629 ----------~-----~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
. .....+......+.+++.+||..+|.+||++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 291 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQ 291 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHH
Confidence 0 000112234568899999999999999999985
No 326
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7.3e-33 Score=296.37 Aligned_cols=244 Identities=26% Similarity=0.382 Sum_probs=190.1
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcC-CCceeeecccccCCc--eEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~--~LV~E 476 (757)
++|.....||.|+||.||+|.+. +..||||.+.... ......+..|+.++.++. ||||++++++|.+.. ++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 46778889999999999999997 7799999987543 223455777888777775 999999999986654 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNT-KPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
|+. ++|.+++.... .++++..+..++.+|+.||.|||+. + |+||||+|+|||++.++.+||+|||++..+...
T Consensus 95 ~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 95 LMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred ccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 985 57877665533 2689999999999999999999974 5 999999999999999999999999998765432
Q ss_pred CCCccccccccCCcccccCCCccccccCC----CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGL----ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA 631 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~ 631 (757)
.. .....+++.|+|||++.+.. ++.++||||||+++|+|++|+.||...... ...+..++....
T Consensus 169 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~ 236 (296)
T cd06618 169 KA-------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQEEP 236 (296)
T ss_pred Cc-------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcCCC
Confidence 21 12335788999999886543 788999999999999999999999642111 112222333222
Q ss_pred CCCC--hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 632 GDWP--IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 632 ~~~p--~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..++ ...+..+.+|+.+||..+|.+||++.+.+
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il 271 (296)
T cd06618 237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELL 271 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 2222 23577899999999999999999997533
No 327
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-34 Score=296.37 Aligned_cols=238 Identities=26% Similarity=0.321 Sum_probs=197.8
Q ss_pred CCccceeeccCCcEEEEEEEECCe--EEEEEEEccCCchhhHH---HHHHHHHHHhc-CCCceeeeccccc--CCceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGNIQNKQ---FLQELEVLSKI-RHPHLLLLLGACP--DHGCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~~~~~~---f~~Ev~il~~l-~Hpniv~l~g~~~--~~~~LV~ 475 (757)
+|....+||+|+||.|.++..+++ .+|||+++.+...+.++ -+.|-.+|... +-|.++.|..+|+ +..|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 588889999999999999998876 89999998875444333 35677777765 5788899998885 5669999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
||+.||+|.-.++..+. +.+..+..+|.+||-||-|||+.+ ||+||||.+|||||.+|++||+|||+++.---+
T Consensus 430 EyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccccC
Confidence 99999999998887665 555677889999999999999988 999999999999999999999999999743221
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
. ......+|||.|+|||++.+.+|+..+|+|||||+|||||.|++||+..+ ++.+...+....-.+|
T Consensus 504 ~------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD-------E~elF~aI~ehnvsyP 570 (683)
T KOG0696|consen 504 G------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-------EDELFQAIMEHNVSYP 570 (683)
T ss_pred C------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHHHHccCcCc
Confidence 1 12256799999999999999999999999999999999999999997553 2334444444556788
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCcc
Q 004388 636 IKETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
...+.+...+....+...|.+|-..
T Consensus 571 KslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 571 KSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred ccccHHHHHHHHHHhhcCCccccCC
Confidence 8899999999999999999999543
No 328
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.9e-33 Score=293.52 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=188.7
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC----ceEEEE
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCLVYE 476 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~LV~E 476 (757)
|....+||.|+||.||+|... +..+|+|.+.... ......+.+|+.++++++|||++++++++.+. .++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 556778999999999999886 4789999998653 33345688999999999999999999998655 489999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
|++ ++|.+++.... ..+++..+..++.||+.||.|||..+ ++|+||+|+|||++.++.+||+|||++.......
T Consensus 81 ~~~-~~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMD-HDLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ccc-ccHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 997 48888876543 35899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch---------hhHH--
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE---------DNLA-- 624 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~---------~~l~-- 624 (757)
.. ..+...++..|+|||.+.+ ..++.++||||||+++|+|+||++||............ ..+.
T Consensus 155 ~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 155 SA-----DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred cc-----cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 10 1133467889999997654 45789999999999999999999999643321110000 0000
Q ss_pred -HH--hhhhcC---------C-CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 625 -EI--LDAQAG---------D-WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 625 -~~--ld~~~~---------~-~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+ ...... . ....++..+.+++.+||..+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 280 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQ 280 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 00 000000 0 00012678899999999999999999875
No 329
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=295.86 Aligned_cols=241 Identities=22% Similarity=0.362 Sum_probs=200.9
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCC
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMEN 480 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~ 480 (757)
|....+||+|+||.||++.++ |..+|||....+. +.+++..|+.||.++..|++|++||.|-.+ ..+|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 667778999999999999886 5588999876643 567789999999999999999999987543 4899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
||+.|++.-+. .+|+..++..|+...+.||.|||... -||||||..||||+-+|++||+|||.|..+.+.
T Consensus 113 GSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT----- 182 (502)
T KOG0574|consen 113 GSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT----- 182 (502)
T ss_pred CcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh-----
Confidence 99999886443 46999999999999999999999988 799999999999999999999999999776542
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETK 640 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~ 640 (757)
..+.....|||.|||||++..-.|+.++||||||++..||.-|+|||...|.....+-... -.+..-..|...+.
T Consensus 183 -MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT----~PPPTF~KPE~WS~ 257 (502)
T KOG0574|consen 183 -MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT----KPPPTFKKPEEWSS 257 (502)
T ss_pred -HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC----CCCCCCCChHhhhh
Confidence 3344667999999999999998999999999999999999999999987776544221100 00111123556788
Q ss_pred HHHHHHHHHhhccCCCCCccch
Q 004388 641 ELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 641 ~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
++.+++.+||-..|++|-++..
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~ 279 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALR 279 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHH
Confidence 9999999999999999988763
No 330
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=7.5e-33 Score=304.26 Aligned_cols=248 Identities=19% Similarity=0.232 Sum_probs=190.6
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccC-------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPD------- 469 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------- 469 (757)
....|.....||+|+||.||+|... +..||+|.+... .......+.+|+.++++++||||++++++|..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3467888999999999999999874 568999998643 22334567889999999999999999998742
Q ss_pred -CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 470 -HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 470 -~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
..|+||||+. ++|.+.+... ++...+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence 2389999996 5888877432 778888999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc--------h
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID--------E 620 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~--------~ 620 (757)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....... .
T Consensus 165 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (353)
T cd07850 165 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237 (353)
T ss_pred ceeCCCCC-------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98654321 12334688999999999988999999999999999999999999964332111000 0
Q ss_pred hhHHHHhh--------hhc-----------C--CC-------ChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 621 DNLAEILD--------AQA-----------G--DW-------PIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 621 ~~l~~~ld--------~~~-----------~--~~-------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+...++ ... . .+ +...+..+.+++.+||..+|.+||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL 309 (353)
T cd07850 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL 309 (353)
T ss_pred HHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh
Confidence 00000000 000 0 00 113456789999999999999999998644
No 331
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.7e-33 Score=302.80 Aligned_cols=253 Identities=21% Similarity=0.330 Sum_probs=192.6
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC------Cce
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD------HGC 472 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------~~~ 472 (757)
.+|.....||.|+||.||+|... +..||+|++.... ......+.+|+.+|++++||||+++++++.. ..+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 57888889999999999999875 5689999987542 2334567889999999999999999998742 238
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
+||||+. |+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 85 lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 9999995 68988875433 4899999999999999999999988 999999999999999999999999999766
Q ss_pred CCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh--------------
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA-------------- 617 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~-------------- 617 (757)
...... .........|+..|+|||++.. ..++.++|||||||++|+|++|++||.........
T Consensus 158 ~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 158 SSSPTE--HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred cccCcC--CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 533211 1111234578999999998755 45889999999999999999999999643221110
Q ss_pred ---hchhhHHHHhhhhc--CCCC-----hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 618 ---IDEDNLAEILDAQA--GDWP-----IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 618 ---~~~~~l~~~ld~~~--~~~p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
...+.+...++... ...+ ...+..+.+++.+||+.+|.+||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 00111111111111 0111 23467899999999999999999988533
No 332
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=315.56 Aligned_cols=194 Identities=29% Similarity=0.485 Sum_probs=168.3
Q ss_pred ccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccC--------CceEE
Q 004388 406 SENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPD--------HGCLV 474 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--------~~~LV 474 (757)
.....||+||||.||+|+++ |..||||.++... ....+...+|+++|++++|||||++++.=.+ ...+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 34456999999999999976 5699999988754 3345667899999999999999999987432 23799
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec--CCC--ceEEeeecCcc
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD--HNL--VSKIGDVGLST 550 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld--~~~--~~KL~DFGla~ 550 (757)
||||.||||+.+|.+-.+...|+..+.+.++.+++.||.|||.++ |+||||||.||++- .+| .-||+|||.|+
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 999999999999998778888999999999999999999999988 99999999999993 333 45999999999
Q ss_pred ccCCCCCCccccccccCCcccccCCCccccc-cCCCCCcchhhhHHHHHHHHHhCCCCcc
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQR-TGLISPKSDVYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDvwSlGvil~elltG~~Pf~ 609 (757)
.++++.. .+..+||+.|.+||... .+.|+.-+|.|||||++|++.||..||-
T Consensus 173 el~d~s~-------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 173 ELDDNSL-------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cCCCCCe-------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 9886542 35679999999999887 4889999999999999999999999995
No 333
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=9.2e-33 Score=291.50 Aligned_cols=246 Identities=29% Similarity=0.373 Sum_probs=198.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC---chhhHHHHHHHHHHHhcC-CCceeeecccccCCc--eEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG---NIQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG--CLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~--~LV 474 (757)
++|.....||.|+||.||+|... +..||+|++.... ......+.+|+.++.+++ ||||+++++++.+.. ++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36778889999999999999884 6799999987532 223456889999999998 999999999986544 899
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
|||+++++|.+++.... .+++..+..|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999986543 5999999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCcc--------------ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch
Q 004388 555 DPSFVS--------------TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE 620 (757)
Q Consensus 555 ~~~~~~--------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 620 (757)
...... .........|+..|++||++....++.++|+||||+++++|++|+.||.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----- 229 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----- 229 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-----
Confidence 321100 0112234568899999999888889999999999999999999999997443211
Q ss_pred hhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 621 DNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 621 ~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.+..+. .....+|...+..+.+++.+||..+|.+||++.
T Consensus 230 -~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 268 (280)
T cd05581 230 -TFQKIL-KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVN 268 (280)
T ss_pred -HHHHHH-hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcc
Confidence 111221 222344555678899999999999999999994
No 334
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-34 Score=327.95 Aligned_cols=241 Identities=25% Similarity=0.321 Sum_probs=197.1
Q ss_pred hhcCCccceeeccCCcEEEEEEEECCe--EEEEEEEccCC---chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eE
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKG---NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~---~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~L 473 (757)
...+|.+.+.||+|+||.|..++.+++ .||+|++..-. .....-|..|-+||..-+.+.|+.|+.+|+|.. ||
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence 345688888999999999999998754 89999987632 234456899999999999999999999998866 89
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
|||||+||+|-.+|.+.+ .+|...+..++.+|..||.-||+.| +|||||||+|||||..|++||+|||.|-.+.
T Consensus 153 VMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred EEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 999999999999887655 4888888889999999999999998 9999999999999999999999999998777
Q ss_pred CCCCCccccccccCCcccccCCCccccc----c-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQR----T-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
.++.. +....+|||.|++||++. + +.|++.+|+||+||++||||.|..||.....+++ +..+++
T Consensus 227 ~dG~V-----~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveT------Y~KIm~ 295 (1317)
T KOG0612|consen 227 ADGTV-----RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVET------YGKIMN 295 (1317)
T ss_pred CCCcE-----EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHH------HHHHhc
Confidence 55432 335679999999999874 2 6799999999999999999999999986655544 233333
Q ss_pred hh-cCCCC--hhHHHHHHHHHHHHhhccCCCCCc
Q 004388 629 AQ-AGDWP--IKETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 629 ~~-~~~~p--~~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
-. .-.+| .+.+.++.+||.+.+. +|..|-.
T Consensus 296 hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 296 HKESLSFPDETDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred hhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc
Confidence 21 22344 5678899999988665 4555644
No 335
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=9.2e-33 Score=294.07 Aligned_cols=245 Identities=25% Similarity=0.317 Sum_probs=191.3
Q ss_pred CCccceeeccCCcEEEEEEEE-----CCeEEEEEEEccCC----chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--
Q 004388 404 SFSENLRIGMGGYGTVYKGTF-----HHTFAAVKVLQSKG----NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG-- 471 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~-----~~~~vAvK~l~~~~----~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~-- 471 (757)
+|.....||.|+||.||++.. ++..+|||++.... ......+.+|+.++.++ +||||+++++.+....
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778899999999999875 34689999986432 22345688999999999 5999999998886543
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++||||+++|+|.+.+.... .+++.....++.|++.||.|||+.+ ++||||||.||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 79999999999999886532 4888999999999999999999987 99999999999999999999999999876
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccCC--CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL--ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
+...... ......|++.|++||++.+.. .+.++||||||+++|+|+||..||......... ..+...+..
T Consensus 155 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~ 226 (288)
T cd05583 155 FLAEEEE-----RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ---SEISRRILK 226 (288)
T ss_pred ccccccc-----ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH---HHHHHHHHc
Confidence 5433211 112346899999999887654 788999999999999999999999633211100 111111112
Q ss_pred hcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 630 QAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 630 ~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.....|...+..+.+++.+||+.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~ 259 (288)
T cd05583 227 SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANG 259 (288)
T ss_pred cCCCCCcccCHHHHHHHHHHhcCCHhhccCcch
Confidence 223344456778999999999999999999873
No 336
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.5e-32 Score=286.06 Aligned_cols=242 Identities=28% Similarity=0.444 Sum_probs=196.0
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|....+||.|+||.||++... +..+++|.+.... ......+.+|+.+++.++||||+++++++.+.. ++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677889999999999999875 4589999886542 233556789999999999999999999886544 899999
Q ss_pred cCCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 478 MENGSLEDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 478 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
+++++|.+++.... ....+++..+..++.+++.||.|||+.+ ++||||+|.||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999886532 2345889999999999999999999988 9999999999999999999999999998765431
Q ss_pred CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCCh
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPI 636 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~ 636 (757)
.....|++.|++||++.+..++.++|+||||+++|+|++|+.||........ ...+........+.
T Consensus 158 --------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~ 223 (256)
T cd08530 158 --------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL------RYKVQRGKYPPIPP 223 (256)
T ss_pred --------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhcCCCCCCch
Confidence 1234688999999999888899999999999999999999999964432110 01111112223344
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 637 KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..+.++.+++.+|+..+|.+||++.+
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDK 249 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHH
Confidence 56788999999999999999999975
No 337
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=9.1e-33 Score=295.63 Aligned_cols=234 Identities=20% Similarity=0.328 Sum_probs=188.6
Q ss_pred eeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC--CceEEEEecCCCCHH
Q 004388 409 LRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD--HGCLVYEYMENGSLE 484 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~~~LV~Ey~~~gsL~ 484 (757)
.+||+|+||.||++... +..||||.+..........+.+|+.+++.++|||++++++.+.+ ..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 56999999999999884 56899998865555556678999999999999999999998854 448999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccccc
Q 004388 485 DRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYK 564 (757)
Q Consensus 485 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~ 564 (757)
+++... .+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++........ .
T Consensus 106 ~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~------~ 172 (292)
T cd06657 106 DIVTHT----RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------R 172 (292)
T ss_pred HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc------c
Confidence 877432 4788999999999999999999987 99999999999999999999999999876543211 1
Q ss_pred ccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhc-CC--CChhHHHH
Q 004388 565 NTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQA-GD--WPIKETKE 641 (757)
Q Consensus 565 ~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~-~~--~p~~~~~~ 641 (757)
.....|++.|++||++.+..++.++|+||||+++|+|++|.+||........ ...+.... .. .....+..
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 245 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-------MKMIRDNLPPKLKNLHKVSPS 245 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhhCCcccCCcccCCHH
Confidence 1234689999999999888889999999999999999999999864322211 11111111 11 11234677
Q ss_pred HHHHHHHHhhccCCCCCccch
Q 004388 642 LAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 642 l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.+++.+||..+|.+||++.+
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ 266 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAE 266 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHH
Confidence 899999999999999999985
No 338
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-33 Score=320.78 Aligned_cols=254 Identities=17% Similarity=0.231 Sum_probs=178.3
Q ss_pred hcCCccceeeccCCcEEEEEEEECCe---EEEEEE--------------Ec---cCCchhhHHHHHHHHHHHhcCCCcee
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHHT---FAAVKV--------------LQ---SKGNIQNKQFLQELEVLSKIRHPHLL 461 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~~---~vAvK~--------------l~---~~~~~~~~~f~~Ev~il~~l~Hpniv 461 (757)
..+|....+||+|+||.||+|..... .+++|. +. .........|.+|+.+|.+++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 34788889999999999999875422 111110 00 01112345678999999999999999
Q ss_pred eecccccCC--ceEEEEecCCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC
Q 004388 462 LLLGACPDH--GCLVYEYMENGSLEDRLYRKNN--TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH 537 (757)
Q Consensus 462 ~l~g~~~~~--~~LV~Ey~~~gsL~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~ 537 (757)
++++++.+. .++|++++. ++|.+++..... ...........|+.||+.||.|||+.+ ||||||||+||||+.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECC
Confidence 999998554 488999985 577777654321 112334567789999999999999988 999999999999999
Q ss_pred CCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCC-Cccccch--h
Q 004388 538 NLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKP-AIAITHK--V 614 (757)
Q Consensus 538 ~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~-Pf~~~~~--~ 614 (757)
++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||+||||++|.. |+..... .
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~ 377 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREA-----FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377 (501)
T ss_pred CCCEEEEeCCCceecCccccc-----ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence 999999999999876543211 1234579999999999998899999999999999999999874 4432110 0
Q ss_pred hhhhc---------------hhhHHHHhhhhc-CCCC---------hhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 615 ETAID---------------EDNLAEILDAQA-GDWP---------IKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 615 ~~~~~---------------~~~l~~~ld~~~-~~~p---------~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..... ...+.+.++... ...+ ...+..+.+++.+||..||.+||++.+.+
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 00000 001111111110 0000 01234677889999999999999998643
No 339
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.8e-32 Score=290.95 Aligned_cols=232 Identities=24% Similarity=0.316 Sum_probs=179.7
Q ss_pred eeccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHH---HHhcCCCceeeecccccCCc--eEEEEecC
Q 004388 410 RIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEV---LSKIRHPHLLLLLGACPDHG--CLVYEYME 479 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~i---l~~l~Hpniv~l~g~~~~~~--~LV~Ey~~ 479 (757)
.||+|+||.||++... +..||+|.+...... ....+..|..+ ++...||||+.+++++.+.. ++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999999874 568999988654221 12234444443 44457999999999886544 89999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
||+|.+++... ..+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 99999888643 35899999999999999999999987 9999999999999999999999999987554321
Q ss_pred cccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhH
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKE 638 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~ 638 (757)
.....|+..|+|||++.++ .++.++|||||||++|+|++|+.||........ .............+|...
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 222 (278)
T cd05606 152 -----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLTMAVELPDSF 222 (278)
T ss_pred -----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch----HHHHHHhhccCCCCCCcC
Confidence 1234789999999998754 589999999999999999999999964321111 111122222223455556
Q ss_pred HHHHHHHHHHHhhccCCCCCc
Q 004388 639 TKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs 659 (757)
+..+.+++.+|+..+|.+||.
T Consensus 223 s~~~~~li~~~l~~~p~~R~~ 243 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLG 243 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccC
Confidence 789999999999999999993
No 340
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.2e-32 Score=286.38 Aligned_cols=230 Identities=25% Similarity=0.270 Sum_probs=181.3
Q ss_pred eeeccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHHH-HhcCCCceeeecccccCC--ceEEEEecCC
Q 004388 409 LRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEVL-SKIRHPHLLLLLGACPDH--GCLVYEYMEN 480 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~il-~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~ 480 (757)
+.||.|+||.||+|... +..||||++...... ....+..|..++ ...+|||++++++++.+. .++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 45899999999999884 569999998654321 222345555544 455899999999998654 4899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
++|.+++.... ++++..+..++.||+.||.|||+.+ ++||||+|+|||++.++.+||+|||++.....
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 99999886543 4788899999999999999999987 99999999999999999999999999875432
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC----h
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP----I 636 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p----~ 636 (757)
.....|++.|++||.+.+..++.++||||||+++|+|+||.+||....... +...+......++ .
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 218 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-------VFDNILSRRINWPEEVKE 218 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHhcccCCCCcccc
Confidence 123468899999999888888999999999999999999999996432211 1111111111222 2
Q ss_pred hHHHHHHHHHHHHhhccCCCCCccc
Q 004388 637 KETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 637 ~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
..+..+.+++.+||..+|.+||++.
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~ 243 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGAN 243 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCC
Confidence 3568899999999999999999875
No 341
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-32 Score=300.19 Aligned_cols=254 Identities=23% Similarity=0.329 Sum_probs=191.2
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhc-CCCceeeecccccCC----ce
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKI-RHPHLLLLLGACPDH----GC 472 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~----~~ 472 (757)
.++|.....||.|+||.||+|.+. +..+|+|.+... .......+.+|+.++.++ +||||++++++|... .+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 456788889999999999999874 578999987543 223345677899999999 999999999987532 38
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
+||||++ ++|..++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+
T Consensus 86 lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 9999997 5898877543 5788999999999999999999987 999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh-------------
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI------------- 618 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~------------- 618 (757)
....... .........||+.|+|||++.+ ..++.++||||||+++|+|+||++||..........
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 158 SELEENP-ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred ccccccc-cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 5433211 0111233578999999997754 567899999999999999999999996432221100
Q ss_pred ----chhhHHHHhhhhc-------CCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 619 ----DEDNLAEILDAQA-------GDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 619 ----~~~~l~~~ld~~~-------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.......+++... .......+..+.+++.+||+.+|.+||++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il 293 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL 293 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh
Confidence 0000011111100 001112467899999999999999999998644
No 342
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.7e-32 Score=290.23 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=190.9
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch--hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEec
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI--QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~--~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
|.....||.|++|.||+|... +..+++|.+...... ....+.+|+.+|++++||||+++++++.+.. ++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 455678999999999999874 668999988654322 4567889999999999999999999986544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
++ +|.+.+.... ..+++..+..++.+|+.||.|||+.+ |+|+||||+||+++.++.+||+|||.+........
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~- 153 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR- 153 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-
Confidence 75 8888776543 35899999999999999999999988 99999999999999999999999999987654321
Q ss_pred ccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch---------hhHHHHhh
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE---------DNLAEILD 628 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~---------~~l~~~ld 628 (757)
......++..|+|||.+.+. .++.++|+||||+++|+|+||++||...+..+..... ..+..+.+
T Consensus 154 -----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 154 -----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred -----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchh
Confidence 11234688899999988766 7899999999999999999999999654432211000 00000000
Q ss_pred ---hh------cCCC-----ChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 629 ---AQ------AGDW-----PIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 629 ---~~------~~~~-----p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
.. .... ....+..+.+++.+||..+|.+||++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~l 277 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQA 277 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHH
Confidence 00 0000 11346789999999999999999999853
No 343
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.3e-32 Score=294.62 Aligned_cols=248 Identities=23% Similarity=0.277 Sum_probs=190.5
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC-------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD------- 469 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------- 469 (757)
..++|.....||.|+||.||+|... +..||+|++.... ......+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567888999999999999999985 5689999987543 2233567789999999999999999998854
Q ss_pred -----CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEe
Q 004388 470 -----HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIG 544 (757)
Q Consensus 470 -----~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~ 544 (757)
..++|+||+++ +|.+.+... ...+++..+..|+.||+.||.|||+.+ |+||||||+||+++.++.+||+
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence 24799999975 777776543 235899999999999999999999988 9999999999999999999999
Q ss_pred eecCccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhH
Q 004388 545 DVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNL 623 (757)
Q Consensus 545 DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l 623 (757)
|||++..+...... ......+++.|+|||++.+ ..++.++|||||||++|+|++|++||........... +
T Consensus 159 dfg~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~---~ 230 (302)
T cd07864 159 DFGLARLYNSEESR-----PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL---I 230 (302)
T ss_pred cccccccccCCccc-----ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---H
Confidence 99999876543211 1122356889999997754 4578999999999999999999999975433221100 0
Q ss_pred HHHhhh--------------------hc------CCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 624 AEILDA--------------------QA------GDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 624 ~~~ld~--------------------~~------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...... .. .......+..+.+++.+||..+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 295 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEE 295 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 000000 00 0001123678999999999999999999875
No 344
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.4e-32 Score=291.41 Aligned_cols=247 Identities=25% Similarity=0.377 Sum_probs=188.3
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCceeeecccccCCc--eEEEEec
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~--~LV~Ey~ 478 (757)
|.....||.|+||.||+|... +..|+||.+..... .......+|+..+.+++ |||++++++++.+.. ++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 556778999999999999985 56899998865432 22334567999999999 999999999986544 8999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
+|+|.+.+.... ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY 155 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence 789999886544 245899999999999999999999988 999999999999999999999999999866543211
Q ss_pred ccccccccCCcccccCCCccccc-cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchh---------------h
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQR-TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDED---------------N 622 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~---------------~ 622 (757)
....|+..|+|||++. ...++.++|+||||+++++|+||++||............. .
T Consensus 156 -------~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 156 -------TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred -------CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 2346889999999774 4457899999999999999999999996443322111000 0
Q ss_pred HHHHhhhhc--------CCCChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 623 LAEILDAQA--------GDWPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 623 l~~~ld~~~--------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
+...++... .......+..+.+++.+||..+|.+||++.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei 277 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQA 277 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHH
Confidence 000000000 00011124679999999999999999999753
No 345
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.9e-32 Score=295.05 Aligned_cols=249 Identities=25% Similarity=0.285 Sum_probs=189.2
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCch--hhHHHHHHHHHHHhcCCCceeeecccccCC----ceE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI--QNKQFLQELEVLSKIRHPHLLLLLGACPDH----GCL 473 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~--~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----~~L 473 (757)
..+|.....||.|+||.||+|.+. +..||+|++...... ....+.+|+.++++++||||+++++++.+. .++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357888999999999999999985 568999998654321 223467899999999999999999987533 489
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
||||+. ++|.+++.... ..+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 86 v~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 58888876533 45899999999999999999999988 9999999999999999999999999998765
Q ss_pred CCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch--------hhHH
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE--------DNLA 624 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~--------~~l~ 624 (757)
.... ......+++.|+|||++.+ ..++.++|||||||++|+|++|++||............ ..+.
T Consensus 160 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 160 LPAK------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred CccC------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 4321 1123356889999998765 45789999999999999999999999644322211000 0000
Q ss_pred HHhhh-------hcCCCC--------hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 625 EILDA-------QAGDWP--------IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 625 ~~ld~-------~~~~~p--------~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..++. .....+ ...+..+.+++.+|+..||.+||++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~ 286 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEE 286 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHH
Confidence 00000 000000 013677889999999999999999885
No 346
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.2e-32 Score=293.97 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=187.4
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
++|.....||.|+||.||+|.+. +..||+|.+..... .....+.+|+.++++++||||+++++++.+.. ++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46788889999999999999875 56899998764322 23456889999999999999999999986544 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-CCceEEeeecCccccCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-NLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-~~~~KL~DFGla~~~~~~ 555 (757)
|++ ++|.+.+.... ...+++.....++.||+.||.|||+.+ |+||||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 57888775433 234677888899999999999999987 999999999999985 567999999999765432
Q ss_pred CCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhh-----HHHHh--
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDN-----LAEIL-- 627 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~-----l~~~l-- 627 (757)
... .....|++.|+|||++.+ ..++.++|||||||++|+|+||++||.............. .....
T Consensus 157 ~~~------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 157 VRT------FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred ccc------cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 111 123467899999998765 4578999999999999999999999964322211100000 00000
Q ss_pred -----h--hhcCCC--------ChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 628 -----D--AQAGDW--------PIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 628 -----d--~~~~~~--------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+ .....| ....+..+.+++.+|+..+|.+||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l 282 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAAL 282 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHh
Confidence 0 000011 123456789999999999999999988533
No 347
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.5e-33 Score=285.52 Aligned_cols=200 Identities=26% Similarity=0.429 Sum_probs=164.8
Q ss_pred cCCccceeeccCCcEEEEEEEECC------eEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc---
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH------TFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--- 471 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~------~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--- 471 (757)
..|....+||+|.||.||++.-.+ ..+|+|.++... ........+|+.+++.|+||||+.|..++..+.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 357777889999999999996532 268999887542 223345689999999999999999999886632
Q ss_pred eEEEEecCCCCHHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC----CceEEee
Q 004388 472 CLVYEYMENGSLEDRLYR--KNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN----LVSKIGD 545 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~----~~~KL~D 545 (757)
+|++||.+. +|..+++- ......++-..+..|++||+.|+.|||++. |+||||||.||||..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 799999985 78887753 333456888999999999999999999999 9999999999999877 9999999
Q ss_pred ecCccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCcc
Q 004388 546 VGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 546 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~ 609 (757)
||+++.+.+.-. ..+.....+-|.+|.|||.+.+ ..|+++.|||+.|||+.||||-.|.|.
T Consensus 180 lGlaR~~~~plk---pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 180 LGLARLFNNPLK---PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred ccHHHHhhcccc---ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 999999875432 2223355688999999998766 469999999999999999999988775
No 348
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.8e-32 Score=294.29 Aligned_cols=255 Identities=22% Similarity=0.294 Sum_probs=188.3
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeecccccCC-------
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACPDH------- 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~------- 470 (757)
.++|....+||.|+||.||+|.+. +..+|||++..... .....+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999985 56899998864432 2234577899999999999999999886321
Q ss_pred ---ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeec
Q 004388 471 ---GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVG 547 (757)
Q Consensus 471 ---~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFG 547 (757)
.++||||+. ++|...+.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence 278999996 46777665432 35899999999999999999999988 9999999999999999999999999
Q ss_pred CccccCCCCCCcc-----ccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc--
Q 004388 548 LSTMLNSDPSFVS-----TTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID-- 619 (757)
Q Consensus 548 la~~~~~~~~~~~-----~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~-- 619 (757)
++........... .....+...|++.|+|||++.+ ..++.++|||||||++|+|++|++||.........-.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9986653322111 1111234577899999997754 4588999999999999999999999964332211000
Q ss_pred -------hhhH------HHHhh-hhcCCCC-------hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 620 -------EDNL------AEILD-AQAGDWP-------IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 620 -------~~~l------~~~ld-~~~~~~p-------~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+ ....+ ......+ ......+.+++.+||..+|.+||++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~e 304 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHH
Confidence 0000 00000 0000001 112367889999999999999999875
No 349
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.3e-32 Score=286.24 Aligned_cols=242 Identities=24% Similarity=0.360 Sum_probs=189.7
Q ss_pred CccceeeccCCcEEEEEEEECCe--EEEEEEEccC-----CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEE
Q 004388 405 FSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSK-----GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVY 475 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~-----~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~ 475 (757)
|....+||.|+||.||++.+... .+++|+++.. .......+..|+.++++++||||+++++++.+.. ++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 66778899999999999987643 4566665432 1123345778999999999999999999986544 8999
Q ss_pred EecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 476 EYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
||+++++|.+++... .....+++..+..++.|++.||.|||+.+ ++|+||||+||+++. +.+||+|||++.....
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999999988652 22346899999999999999999999987 999999999999975 5699999999977643
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
... ......|++.|+|||++.+..++.++|+||||+++|+|++|..||....... .............
T Consensus 158 ~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 225 (260)
T cd08222 158 SCD------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS------VVLRIVEGPTPSL 225 (260)
T ss_pred Ccc------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHcCCCCCC
Confidence 321 1123468899999999888888999999999999999999999985332211 1112222222334
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+...+..+.+++.+||..+|.+||++.+
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 253 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAE 253 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHH
Confidence 5566789999999999999999999885
No 350
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.5e-32 Score=301.13 Aligned_cols=256 Identities=22% Similarity=0.284 Sum_probs=194.5
Q ss_pred ccCCCHHHHHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecc
Q 004388 390 YRNLTWEEIESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLG 465 (757)
Q Consensus 390 ~~~~~~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g 465 (757)
++.....++...+++|.....||+|+||.||+|... +..||+|++.... ......+.+|+.++.+++||||+++++
T Consensus 4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 4 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred chhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 344455667778899999999999999999999864 5689999886532 223456888999999999999999999
Q ss_pred cccC--------CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC
Q 004388 466 ACPD--------HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH 537 (757)
Q Consensus 466 ~~~~--------~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~ 537 (757)
++.. ..+++++++ +++|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~ 155 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNE 155 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcC
Confidence 8742 236788876 78998877532 3889999999999999999999988 999999999999999
Q ss_pred CCceEEeeecCccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhh
Q 004388 538 NLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVET 616 (757)
Q Consensus 538 ~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~ 616 (757)
++.+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||++|+|++|++||........
T Consensus 156 ~~~~kl~dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~ 226 (345)
T cd07877 156 DCELKILDFGLARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 226 (345)
T ss_pred CCCEEEeccccccccccc---------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999999998764321 133478999999998765 5688999999999999999999999964322111
Q ss_pred hh-----------------chhhHHHHhhh--hcC-----CCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 617 AI-----------------DEDNLAEILDA--QAG-----DWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 617 ~~-----------------~~~~l~~~ld~--~~~-----~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.. ........+.. ... ......+..+.+++.+|++.+|.+||+..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 296 (345)
T cd07877 227 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 296 (345)
T ss_pred HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHH
Confidence 00 00000000000 000 001123567899999999999999999875
No 351
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.4e-32 Score=300.23 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=191.3
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccCC-------
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH------- 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~------- 470 (757)
...|.....||.|+||.||+|... +..||||.+... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 356888899999999999999875 569999988643 222345677899999999999999999987432
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 489999996 6898887543 34889999999999999999999987 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhh-------------
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVET------------- 616 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~------------- 616 (757)
....... ......|+..|+|||.+.. ..++.++|||||||++|+|++|++||........
T Consensus 157 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 230 (337)
T cd07858 157 TTSEKGD------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230 (337)
T ss_pred ccCCCcc------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 7653321 1233468899999997754 4689999999999999999999999964322110
Q ss_pred ----hhchhhHHHHhhhhc-------CCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 617 ----AIDEDNLAEILDAQA-------GDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 617 ----~~~~~~l~~~ld~~~-------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.+........+.... .......+..+.+++.+||+.+|.+||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell 289 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEAL 289 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHH
Confidence 000111111111000 001123567789999999999999999998543
No 352
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=282.33 Aligned_cols=241 Identities=23% Similarity=0.316 Sum_probs=192.4
Q ss_pred cCCccc-eeeccCCcEEEEEEEECCe--EEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccccCC----c--e
Q 004388 403 LSFSEN-LRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACPDH----G--C 472 (757)
Q Consensus 403 ~~f~~~-~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~----~--~ 472 (757)
.+|... .+||-|-.|.|..+..+.+ .+|+|++.. .....+|+++.-.. .|||||.++++|.+. . .
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 344333 4699999999999988644 899999854 23456788876555 599999999998542 2 4
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec---CCCceEEeeecCc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD---HNLVSKIGDVGLS 549 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld---~~~~~KL~DFGla 549 (757)
+|||.|+||.|..++..++. ..+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.. .|-.+||+|||+|
T Consensus 136 iVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccc
Confidence 69999999999999987764 46899999999999999999999998 99999999999995 4678999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
+...... .....+.||+|.|||++...+|+..+|+||+|||+|-||+|.|||...|. .++..+--..+...
T Consensus 212 K~t~~~~-------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--~aispgMk~rI~~g 282 (400)
T KOG0604|consen 212 KETQEPG-------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LAISPGMKRRIRTG 282 (400)
T ss_pred cccCCCc-------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC--ccCChhHHhHhhcc
Confidence 8754322 23567899999999999999999999999999999999999999986655 34444433333222
Q ss_pred hcCCCCh----hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 630 QAGDWPI----KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 630 ~~~~~p~----~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.-.+|. ..+...+++|...|..+|.+|-++.+
T Consensus 283 -qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~ 318 (400)
T KOG0604|consen 283 -QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEE 318 (400)
T ss_pred -CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHH
Confidence 222332 35788899999999999999999875
No 353
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.6e-32 Score=300.67 Aligned_cols=247 Identities=21% Similarity=0.298 Sum_probs=189.8
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH------ 470 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~------ 470 (757)
..++|.....||.|+||.||+|... +..||||.+.... ......+.+|+.+|++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4667888999999999999999875 5689999885432 22345688999999999999999999987532
Q ss_pred --ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 471 --GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 471 --~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
.++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccc
Confidence 27999999 7799887753 24889999999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc--------
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID-------- 619 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~-------- 619 (757)
+...... .....+++.|++||++.+ ..++.++|+|||||++|+|++|++||...........
T Consensus 165 ~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd07880 165 ARQTDSE---------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTP 235 (343)
T ss_pred ccccccC---------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9765432 123467899999998765 4588999999999999999999999964332211000
Q ss_pred hhhHHH---------Hhhhhc-------CCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 620 EDNLAE---------ILDAQA-------GDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 620 ~~~l~~---------~ld~~~-------~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
...+.. .+.... .......+..+.+++.+|+..+|.+||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 236 SKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred CHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000000 000000 001123456789999999999999999998533
No 354
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.7e-32 Score=296.40 Aligned_cols=250 Identities=24% Similarity=0.296 Sum_probs=193.3
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC-------ce
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-------GC 472 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-------~~ 472 (757)
+|.....||.|+||.||+|... +..+|||++.... ......+.+|+.+++.++||||+++++++.+. .|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4677889999999999999975 5689999987643 33456789999999999999999999998543 38
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
+||||++ ++|.+++.... ++++..+..++.+|+.||.|||+.+ |+||||||.|||++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58888875433 6899999999999999999999988 999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhh--------------
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETA-------------- 617 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~-------------- 617 (757)
...... ........+|+.|+|||++.+. .++.++|+||||+++|+|+||++||......+..
T Consensus 154 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 154 DPDEDE---KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred cccccc---cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 543211 0112345689999999998877 7899999999999999999999999644321110
Q ss_pred ---hchhhHHHHhhhhcCCC-------ChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 618 ---IDEDNLAEILDAQAGDW-------PIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 618 ---~~~~~l~~~ld~~~~~~-------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
.........+....... ....+..+.+++.+||+.+|.+||++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l 286 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEA 286 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 00000111111000000 11245778999999999999999998853
No 355
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.7e-32 Score=300.26 Aligned_cols=245 Identities=23% Similarity=0.324 Sum_probs=186.3
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC-------
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH------- 470 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~------- 470 (757)
..+|.....||.|+||.||+|... +..||||++.... ......+.+|+.+++.++||||++++++|...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 367888899999999999999874 6689999886432 22345688999999999999999999987532
Q ss_pred -ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 471 -GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
.++|+||+. ++|..++. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEecccc-cCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 279999996 47766541 24889999999999999999999988 999999999999999999999999998
Q ss_pred cccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc--------h
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID--------E 620 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~--------~ 620 (757)
+..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........... .
T Consensus 165 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 165 RHADAE---------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred cCCCCC---------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 764321 134467899999998765 4688999999999999999999999974332111000 0
Q ss_pred hhHHHHhhh--------hcCCC--------ChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 621 DNLAEILDA--------QAGDW--------PIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 621 ~~l~~~ld~--------~~~~~--------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
..+.+.+.. ..... ....+..+.+|+.+||+.+|.+||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 000000000 00000 012356788999999999999999998643
No 356
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.1e-32 Score=295.59 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=190.8
Q ss_pred HHHHhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccC---
Q 004388 397 EIESATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPD--- 469 (757)
Q Consensus 397 ei~~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--- 469 (757)
++..++++|.....||.|+||.||++... +..||||.+.... ......+.+|+.++..++||||++++++|..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34457889999999999999999999865 5589999875432 2234668899999999999999999998743
Q ss_pred CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 470 HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 470 ~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
..++||||+ +++|.+++.. .++++.....++.|++.||.|||+.+ |+||||+|.|||++.++.+||+|||++
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccc
Confidence 348999998 5689887743 24778888899999999999999988 999999999999999999999999998
Q ss_pred cccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhh-----------
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETA----------- 617 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~----------- 617 (757)
...... .....+++.|+|||++.+ ..++.++|||||||++|+|+||++||.........
T Consensus 156 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 226 (328)
T cd07856 156 RIQDPQ---------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPP 226 (328)
T ss_pred cccCCC---------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 754321 123467889999998765 56899999999999999999999999643321110
Q ss_pred ------hchhhHHHHhhhhcC--CCC-----hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 618 ------IDEDNLAEILDAQAG--DWP-----IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 618 ------~~~~~l~~~ld~~~~--~~p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+..+...+++..... ..| ...+..+.+++.+||..+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~e 284 (328)
T cd07856 227 DDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAE 284 (328)
T ss_pred HHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 000011111111111 111 124578999999999999999999875
No 357
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3e-32 Score=296.31 Aligned_cols=251 Identities=18% Similarity=0.246 Sum_probs=184.4
Q ss_pred eeccC--CcEEEEEEEE--CCeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCC
Q 004388 410 RIGMG--GYGTVYKGTF--HHTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENG 481 (757)
Q Consensus 410 ~IG~G--~~G~Vyk~~~--~~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~g 481 (757)
.||.| +||+||++.+ .++.||+|++.... ....+.+.+|+.+++.++||||++++++|.... ++||||+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999988 46799999987543 223467889999999999999999999986544 8999999999
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccc
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVST 561 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~ 561 (757)
+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+|++|||.+............
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99998876432 35889999999999999999999987 999999999999999999999999876443322111110
Q ss_pred ccc-ccCCcccccCCCccccccC--CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch---h--------------
Q 004388 562 TYK-NTGPVGTLCYIDPEYQRTG--LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE---D-------------- 621 (757)
Q Consensus 562 ~~~-~~~~~gt~~Y~aPE~~~~~--~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~---~-------------- 621 (757)
.+. .....++..|++||++.++ .++.++|||||||++|+|++|++||............ .
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 000 1112456779999998764 4789999999999999999999999643221111000 0
Q ss_pred --------hH---------H-----HHhhhh-cCCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 622 --------NL---------A-----EILDAQ-AGDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 622 --------~l---------~-----~~ld~~-~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.. . .+.+.. ....+...+..+.+|+.+||..+|.+||++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 00 0 000000 0011223567899999999999999999998644
No 358
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.1e-32 Score=291.10 Aligned_cols=237 Identities=27% Similarity=0.393 Sum_probs=185.4
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
|....+||.|+||.||+|... +..|++|++..... .....+.+|+++++.++|||++++++++.+.. ++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555667999999999999874 56899999865322 23356788999999999999999999986544 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+. |+|.+.+.... .++++..+..++.||+.||.|||+.+ |+||||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 67878775433 35899999999999999999999988 99999999999999999999999999864321
Q ss_pred CccccccccCCcccccCCCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQR---TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
.....|+..|+|||++. .+.++.++|||||||++|+|++|.+||......... ..+........
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~------~~~~~~~~~~~ 240 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQNDSPTL 240 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHhcCCCCC
Confidence 12347899999999874 456889999999999999999999998643322111 11111111111
Q ss_pred -ChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 635 -PIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 635 -p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
....+..+.+++.+||+.+|.+||++.++
T Consensus 241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~ 270 (313)
T cd06633 241 QSNEWTDSFRGFVDYCLQKIPQERPASAEL 270 (313)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11234678999999999999999998853
No 359
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=278.93 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=200.8
Q ss_pred HHHHHHhhcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcC-CCceeeecccccCCc
Q 004388 395 WEEIESATLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG 471 (757)
Q Consensus 395 ~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~ 471 (757)
++|+-..|. ..||+|+||.|--+.. .+..||||++.+.....+.+..+|++++.+.+ |+||+.|+.+|.+..
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 445555544 3599999999998765 46689999999887778889999999999985 999999999997654
Q ss_pred --eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC---ceEEeee
Q 004388 472 --CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL---VSKIGDV 546 (757)
Q Consensus 472 --~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~---~~KL~DF 546 (757)
|||||-|.||+|...+.+... +++.+..++..+|+.||.|||..+ |.||||||+|||-.... -+|||||
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~~---F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRKH---FNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred eEEEEEecccCchHHHHHHHhhh---ccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecc
Confidence 999999999999998887654 888899999999999999999988 99999999999996654 4799999
Q ss_pred cCccccCCCCCC-ccccccccCCcccccCCCcccc-----ccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch
Q 004388 547 GLSTMLNSDPSF-VSTTYKNTGPVGTLCYIDPEYQ-----RTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE 620 (757)
Q Consensus 547 Gla~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~-----~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 620 (757)
.|..-+.-..+. ...+..-..++|+..|||||+. ....|+.++|.||||||||-||.|.+||.........++.
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 998654322211 1222233567999999999954 2346899999999999999999999999755444444443
Q ss_pred h--------hHHHHhhhhcCCCCh----hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 D--------NLAEILDAQAGDWPI----KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 ~--------~l~~~ld~~~~~~p~----~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+ .+.+-+...--.+|. ..+.+..+|+...+-.++.+|-++..
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~ 357 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQ 357 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhh
Confidence 3 333333333333443 35677889999999999999988764
No 360
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-34 Score=331.61 Aligned_cols=251 Identities=25% Similarity=0.335 Sum_probs=196.0
Q ss_pred HHHhhcCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccc--cCCc
Q 004388 398 IESATLSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGAC--PDHG 471 (757)
Q Consensus 398 i~~at~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~--~~~~ 471 (757)
+...+-++....+||.|.||.||-|.... ...|+|-+.... ......+.+|+.+|..|+|||+|++||+= .+..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 34446678888899999999999998754 467888765443 22334577899999999999999999974 4556
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
+|.||||++|+|.+.+...+. .++.....+..|++.||.|||++| ||||||||+||||+.+|.+|++|||.|..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeE
Confidence 899999999999998865443 455566678889999999999998 99999999999999999999999999988
Q ss_pred cCCCCCCccccccccCCcccccCCCccccccC---CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG---LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILD 628 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld 628 (757)
+.+... .....-....||+.|||||++.+. ...-+.|||||||+++||+||+.||.-.+.-+. .+..+-.
T Consensus 1384 i~~~~~--~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a-----IMy~V~~ 1456 (1509)
T KOG4645|consen 1384 IKNNAQ--TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA-----IMYHVAA 1456 (1509)
T ss_pred ecCchh--cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH-----HHhHHhc
Confidence 775421 111223456899999999988643 356789999999999999999999963322111 1222222
Q ss_pred hhcCCCChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 629 AQAGDWPIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 629 ~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
...+..|...+.+-.+++.+||+.||++|-++.
T Consensus 1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~ 1489 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTAS 1489 (1509)
T ss_pred cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHH
Confidence 334566777888899999999999999995554
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.4e-32 Score=291.74 Aligned_cols=236 Identities=28% Similarity=0.419 Sum_probs=185.5
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccC---CchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK---GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~---~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
|.....||.|+||.||+|... +..+|+|.+... .......+.+|+++++.++|||++++++++.+.. ++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 556678999999999999874 568999987643 2223456889999999999999999999886543 899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
+. |+|.+.+.... .++++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 97 ~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 97 CL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred cC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 96 68887775433 34889999999999999999999987 999999999999999999999999998765432
Q ss_pred CccccccccCCcccccCCCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC-
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQR---TGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD- 633 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~- 633 (757)
....|++.|+|||++. .+.++.++|||||||++|+|+||+.||........ +..+.......
T Consensus 169 --------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~ 234 (308)
T cd06634 169 --------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQNESPAL 234 (308)
T ss_pred --------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH------HHHHhhcCCCCc
Confidence 2346889999999874 35678899999999999999999999854321111 11111111111
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+...+..+.+|+.+||..+|.+||++.+
T Consensus 235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ 263 (308)
T cd06634 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEV 263 (308)
T ss_pred CcccccHHHHHHHHHHhhCCcccCCCHHH
Confidence 12245678999999999999999999875
No 362
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.3e-33 Score=323.40 Aligned_cols=249 Identities=29% Similarity=0.396 Sum_probs=184.8
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccC----------
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPD---------- 469 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~---------- 469 (757)
.+|.+...||+||||.||+++. +|+.||||++.... ......+.+|+.+|++|+|||||++|.+|.+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 4677888899999999999986 68999999987653 3344568899999999999999999864400
Q ss_pred --------------------------------------------------------------------C-----------
Q 004388 470 --------------------------------------------------------------------H----------- 470 (757)
Q Consensus 470 --------------------------------------------------------------------~----------- 470 (757)
+
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence 0
Q ss_pred --------------------------------ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhC
Q 004388 471 --------------------------------GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNT 518 (757)
Q Consensus 471 --------------------------------~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~ 518 (757)
.||-||||+...|.+++.++.... .....++++.+|+.||.|+|+.
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHhC
Confidence 045688888777777665443211 2345678999999999999998
Q ss_pred CCCCEEEcCCCCCCeeecCCCceEEeeecCccccC----C--------CCCCccccccccCCcccccCCCccccccC---
Q 004388 519 KPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN----S--------DPSFVSTTYKNTGPVGTLCYIDPEYQRTG--- 583 (757)
Q Consensus 519 ~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~----~--------~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--- 583 (757)
+ ||||||||.||+||.++.+||+|||+|+... . ...........|+.+||.-|+|||++.+.
T Consensus 717 g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 717 G---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred c---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 8 9999999999999999999999999998722 0 00111222245778999999999988665
Q ss_pred CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC---CChhHHHHHHHHHHHHhhccCCCCCcc
Q 004388 584 LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD---WPIKETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 584 ~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~---~p~~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
.|+.|+|+|||||||+||+. ||+.. .+.+. .+..+-+...+. +.....+.-+.+|.++++.||.+||++
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa~---iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA 865 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTS--MERAS---ILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA 865 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCch--HHHHH---HHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH
Confidence 49999999999999999996 46422 22221 112222222221 233455667899999999999999999
Q ss_pred chhh
Q 004388 661 KNQV 664 (757)
Q Consensus 661 ~~~v 664 (757)
.+.+
T Consensus 866 ~eLL 869 (1351)
T KOG1035|consen 866 TELL 869 (1351)
T ss_pred HHHh
Confidence 8643
No 363
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=7.8e-32 Score=279.80 Aligned_cols=233 Identities=29% Similarity=0.356 Sum_probs=191.3
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCCch---hhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI---QNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSL 483 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL 483 (757)
||.|+||.||++... +..+++|++...... ....+..|+.++++++||||+++++.+.+.. ++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999885 579999998765322 4457889999999999999999999986554 899999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
.+++.... .+++.....++.|++.||.|||..+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~------ 148 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS------ 148 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCC------
Confidence 99986543 4889999999999999999999987 99999999999999999999999999977654321
Q ss_pred cccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHH
Q 004388 564 KNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELA 643 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~ 643 (757)
......++..|++||...+...+.++|+||||+++|+|++|+.||...... .....+.. .....|...+..+.
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~~-~~~~~~~~~~~~l~ 221 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK------EIYEKILK-DPLRFPEFLSPEAR 221 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHhc-CCCCCCCCCCHHHH
Confidence 123457899999999998888899999999999999999999999643321 11112221 22344555678899
Q ss_pred HHHHHHhhccCCCCCccch
Q 004388 644 ALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 644 ~Li~~Cl~~~p~~RPs~~~ 662 (757)
+++.+||..+|.+||++.+
T Consensus 222 ~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHhcCCHhhCCCccc
Confidence 9999999999999999963
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.1e-32 Score=297.16 Aligned_cols=249 Identities=22% Similarity=0.328 Sum_probs=187.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCC----------
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH---------- 470 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~---------- 470 (757)
.+|...+.||.|+||.||+|... +..||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57888899999999999999885 568999998766555567788999999999999999999876432
Q ss_pred ------ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec-CCCceEE
Q 004388 471 ------GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD-HNLVSKI 543 (757)
Q Consensus 471 ------~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld-~~~~~KL 543 (757)
.++||||++ ++|.+.+.. ..+++.....++.||+.||.|||+.+ |+||||||+|||++ .++.+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence 379999997 588887743 24888999999999999999999988 99999999999997 4668899
Q ss_pred eeecCccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhc---
Q 004388 544 GDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAID--- 619 (757)
Q Consensus 544 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~--- 619 (757)
+|||+++.+....... .......|+..|+|||++.. ..++.++|||||||++|+|++|+.||...+.......
T Consensus 157 ~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 157 GDFGLARIVDPHYSHK---GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred CCcccceecCCccccc---cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999998654321110 01123467899999997644 5688899999999999999999999964432221100
Q ss_pred ---------hhhHH----HHhh--hhcCCCC-----hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 620 ---------EDNLA----EILD--AQAGDWP-----IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 620 ---------~~~l~----~~ld--~~~~~~p-----~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+. ..+. ......+ ...+..+.+++.+||..+|.+||++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 296 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEE 296 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHH
Confidence 00000 0000 0001111 124567889999999999999999885
No 365
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=302.78 Aligned_cols=243 Identities=22% Similarity=0.299 Sum_probs=200.1
Q ss_pred HhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCceeeeccccc--CCceE
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHLLLLLGACP--DHGCL 473 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpniv~l~g~~~--~~~~L 473 (757)
....+|....+||.|.|+.|.++++. ++.||||++....- .....+.+|+++|..|+|||||+++++.. ...|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34567888999999999999999875 67999999876542 23355889999999999999999999975 44599
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
||||..+|.+.++|.+.+. +.......++.|+.+|++|||+.+ |||||||.+||||+.+..+||+|||++..+.
T Consensus 133 V~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999988765 344677889999999999999988 9999999999999999999999999999887
Q ss_pred CCCCCccccccccCCcccccCCCccccccCCC-CCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh--
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLI-SPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ-- 630 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~-- 630 (757)
... .....+|++.|+|||++.+..| ++.+|+||+|++||-|+.|..||+.... ..+-+..
T Consensus 207 ~~~-------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l----------k~Lr~rvl~ 269 (596)
T KOG0586|consen 207 YGL-------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL----------KELRPRVLR 269 (596)
T ss_pred ccc-------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc----------ccccchhee
Confidence 432 2245699999999999988765 5899999999999999999999974321 1111111
Q ss_pred -cCCCChhHHHHHHHHHHHHhhccCCCCCccchhhh
Q 004388 631 -AGDWPIKETKELAALGLSCAELRRKDRPDLKNQVL 665 (757)
Q Consensus 631 -~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl 665 (757)
.-..|.-.+.+..+|+.+++-++|.+|+++.+...
T Consensus 270 gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 270 GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 11235556778899999999999999999985443
No 366
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-31 Score=284.88 Aligned_cols=240 Identities=26% Similarity=0.368 Sum_probs=187.0
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc--hhhHHHHHHHHHHHhc---CCCceeeecccccC--C-----
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN--IQNKQFLQELEVLSKI---RHPHLLLLLGACPD--H----- 470 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l---~Hpniv~l~g~~~~--~----- 470 (757)
|.....||.|+||.||+|.+. +..+|+|++..... .....+.+|+.++.++ +|||++++++++.+ .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 556788999999999999985 57999999874322 2234566788887766 59999999999853 2
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.+++|||+. ++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.+||+|||++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence 479999997 589888865432 35899999999999999999999987 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ 630 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~ 630 (757)
.+..... .....+++.|+|||++.+..++.++|||||||++|+|+||++||......+. +..+++..
T Consensus 156 ~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~------~~~~~~~~ 222 (287)
T cd07838 156 IYSFEMA-------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ------LDKIFDVI 222 (287)
T ss_pred eccCCcc-------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH------HHHHHHHc
Confidence 7653321 1233578999999999888899999999999999999999999964432211 11111100
Q ss_pred ----------------------cCCC----ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 631 ----------------------AGDW----PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 631 ----------------------~~~~----p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.... ....+..+.+++.+||..+|.+||++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~ 280 (287)
T cd07838 223 GLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFE 280 (287)
T ss_pred CCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHH
Confidence 0000 0133577889999999999999999885
No 367
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=9.4e-32 Score=292.94 Aligned_cols=252 Identities=23% Similarity=0.293 Sum_probs=186.9
Q ss_pred CCccceeeccCCcEEEEEEEECC----eEEEEEEEccCC--chhhHHHHHHHHHHHhc-CCCceeeecccccC------C
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHH----TFAAVKVLQSKG--NIQNKQFLQELEVLSKI-RHPHLLLLLGACPD------H 470 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~----~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~------~ 470 (757)
+|.....||.|+||.||++...+ ..||+|.+.... ......+.+|+.++.++ .||||+++++++.. .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 46777889999999999999864 489999886432 22345678899999999 59999999986421 2
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.+++++|+. ++|.+.+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 367888885 6898888543 35889999999999999999999988 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh---------ch
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI---------DE 620 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~---------~~ 620 (757)
.+...... .........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.......... ..
T Consensus 154 ~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 154 GFSENPGE--NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred eccccccc--ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 76543211 1111234578999999998755 468899999999999999999999996433111000 00
Q ss_pred hhHHHHhhh-------hcCCC--------ChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 621 DNLAEILDA-------QAGDW--------PIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 621 ~~l~~~ld~-------~~~~~--------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+.+..+... ..... ....+..+.+++.+|++.+|.+||++.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000000000 00000 012356899999999999999999998643
No 368
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=4.3e-32 Score=286.94 Aligned_cols=246 Identities=24% Similarity=0.376 Sum_probs=190.5
Q ss_pred CccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEec
Q 004388 405 FSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYM 478 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~ 478 (757)
|+....||.|+||.||+|... +..+|+|++.... ......+..|+.++++++|||++++++++.+. .++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999986 5699999987653 33346678899999999999999999998654 48999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~ 558 (757)
+ ++|.+++.... ..+++..+..++.+++.||.|||..+ |+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 58999887643 35899999999999999999999988 99999999999999999999999999987654321
Q ss_pred ccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch---------hhHHHHh-
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE---------DNLAEIL- 627 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~---------~~l~~~l- 627 (757)
......++..|+|||++.+. .++.++|||||||++|+|++|++||............ ..+..+.
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 11233567889999988766 7899999999999999999999999654332211000 0000000
Q ss_pred ----hhhcCCCC--------hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 628 ----DAQAGDWP--------IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 628 ----d~~~~~~p--------~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.....++ ...+..+.+++.+||..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 275 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKE 275 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHH
Confidence 00001110 122568999999999999999999875
No 369
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-32 Score=273.94 Aligned_cols=236 Identities=27% Similarity=0.415 Sum_probs=188.4
Q ss_pred eeccCCcEEEEEEEECC--eEEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCceeeecccccCCc--eEEEEecCCCCH
Q 004388 410 RIGMGGYGTVYKGTFHH--TFAAVKVLQSKGN-IQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG--CLVYEYMENGSL 483 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~--~LV~Ey~~~gsL 483 (757)
.||.|+-|.||++++.. ...|||.+....+ ...++++..+.++.+.+ .|+||+.+|+|.... .+.||.|. ..+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ 177 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCA 177 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHH
Confidence 49999999999999875 6889999876543 34567888888887765 899999999985443 67889884 456
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTY 563 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~ 563 (757)
+.+|.+.. .++|+...-++..-+..||.||...+ +|||||+||+|||+|..|.+||||||++-.+.+...
T Consensus 178 ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA------ 247 (391)
T KOG0983|consen 178 EKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA------ 247 (391)
T ss_pred HHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc------
Confidence 66665433 35899888899999999999999865 599999999999999999999999999977765432
Q ss_pred cccCCcccccCCCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC--hhH
Q 004388 564 KNTGPVGTLCYIDPEYQRT---GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP--IKE 638 (757)
Q Consensus 564 ~~~~~~gt~~Y~aPE~~~~---~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p--~~~ 638 (757)
.+..+|.+.|||||.+.. ..|+.++|||||||+|+||.||+.||.... .+.+.+..+++...+..| ...
T Consensus 248 -htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~-----tdFe~ltkvln~ePP~L~~~~gF 321 (391)
T KOG0983|consen 248 -HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK-----TDFEVLTKVLNEEPPLLPGHMGF 321 (391)
T ss_pred -cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC-----ccHHHHHHHHhcCCCCCCcccCc
Confidence 244589999999998753 468999999999999999999999997532 233445556654332222 236
Q ss_pred HHHHHHHHHHHhhccCCCCCccch
Q 004388 639 TKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
++.+.+++..||..|+.+||...+
T Consensus 322 Sp~F~~fv~~CL~kd~r~RP~Y~~ 345 (391)
T KOG0983|consen 322 SPDFQSFVKDCLTKDHRKRPKYNK 345 (391)
T ss_pred CHHHHHHHHHHhhcCcccCcchHH
Confidence 889999999999999999999874
No 370
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.3e-33 Score=297.25 Aligned_cols=239 Identities=23% Similarity=0.297 Sum_probs=200.5
Q ss_pred CccceeeccCCcEEEEEEEECCeE--EEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 405 FSENLRIGMGGYGTVYKGTFHHTF--AAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~~~--vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+.....||-||||.|=++..++.. +|+|++++... .+.+.+..|-.||..++.|.||+||..|.+.. |+.||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 344456999999999999987664 78998876543 34456788999999999999999999998876 788999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|-||.|+..|..++. +...+...++.+++.|+.|||+.+ ||+|||||+|.|||.+|.+||.|||+|+.+.....
T Consensus 502 ClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 502 CLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred hcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 999999999977664 666777889999999999999988 99999999999999999999999999998876542
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK 637 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~ 637 (757)
.-+++|||.|.|||++.+...+.++|.|||||++||||||.|||...+....- ..+..-+|. -.||..
T Consensus 576 -------TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY---n~ILkGid~--i~~Pr~ 643 (732)
T KOG0614|consen 576 -------TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY---NLILKGIDK--IEFPRR 643 (732)
T ss_pred -------eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH---HHHHhhhhh--hhcccc
Confidence 24579999999999998888999999999999999999999999876655431 122222222 467888
Q ss_pred HHHHHHHHHHHHhhccCCCCCccc
Q 004388 638 ETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 638 ~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.+....+|+.+.|..+|.+|-...
T Consensus 644 I~k~a~~Lik~LCr~~P~ERLG~~ 667 (732)
T KOG0614|consen 644 ITKTATDLIKKLCRDNPTERLGYQ 667 (732)
T ss_pred cchhHHHHHHHHHhcCcHhhhccc
Confidence 899999999999999999997743
No 371
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=1.3e-31 Score=292.07 Aligned_cols=245 Identities=24% Similarity=0.318 Sum_probs=183.5
Q ss_pred ceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchh--------------hHHHHHHHHHHHhcCCCceeeecccccCC-
Q 004388 408 NLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQ--------------NKQFLQELEVLSKIRHPHLLLLLGACPDH- 470 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~--------------~~~f~~Ev~il~~l~Hpniv~l~g~~~~~- 470 (757)
...||.|+||.||+|.+. +..||||++....... ...+.+|+++++.++||||+++++++...
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 356999999999999875 5689999886432211 12477899999999999999999998644
Q ss_pred -ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 471 -GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 471 -~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
.++||||+. |+|.+++.... .+++.....++.|++.||.|||+.+ |+||||+|+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCccce
Confidence 489999997 68998886433 4888999999999999999999987 999999999999999999999999999
Q ss_pred cccCCCCCCc--------cccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch
Q 004388 550 TMLNSDPSFV--------STTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE 620 (757)
Q Consensus 550 ~~~~~~~~~~--------~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 620 (757)
.......... ..........+++.|+|||++.+. .++.++|||||||++|+|+||++||..........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-- 244 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG-- 244 (335)
T ss_pred eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--
Confidence 8665211000 001112234678899999988654 47899999999999999999999997543322110
Q ss_pred hhHHHHhh-hhcCCC-----------------------ChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 621 DNLAEILD-AQAGDW-----------------------PIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 621 ~~l~~~ld-~~~~~~-----------------------p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+...+. +....| ....+..+.+++.+||..+|.+||++.+
T Consensus 245 -~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 309 (335)
T PTZ00024 245 -RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKE 309 (335)
T ss_pred -HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHH
Confidence 0000000 000001 0123567899999999999999999875
No 372
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.7e-32 Score=288.75 Aligned_cols=246 Identities=28% Similarity=0.429 Sum_probs=188.7
Q ss_pred CccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHh--cCCCceeeecccccC------CceEEEE
Q 004388 405 FSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSK--IRHPHLLLLLGACPD------HGCLVYE 476 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~--l~Hpniv~l~g~~~~------~~~LV~E 476 (757)
......||+|.||.||+|.+++..||||++... ..+.|.+|-+|.+. +.|+||++|+++-.. ...||++
T Consensus 212 l~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhhHHHhhcCccceeehhhccCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 334456999999999999999999999999753 45678888888775 579999999998532 2268999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCC------CCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKP------KPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~------~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
|-+.|||.++|.... ++|....+|+.-+++||+|||.--| ++|+|||||..||||..|+.+.|+|||||.
T Consensus 289 fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 289 FHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred eccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 999999999997543 8999999999999999999998443 589999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCccccccCC-CC-----CcchhhhHHHHHHHHHhCCCCc--cccchhhhhhc---
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL-IS-----PKSDVYAYGMVILQLLTAKPAI--AITHKVETAID--- 619 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-----~ksDvwSlGvil~elltG~~Pf--~~~~~~~~~~~--- 619 (757)
.+........ ..+.+||..|||||++.+.. +. .+.||||+|.|||||++.-..+ +........++
T Consensus 365 ~~~p~~~~~d----~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 365 RLEPGKPQGD----THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred EecCCCCCcc----hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 8875543222 24479999999999886542 22 3689999999999999975443 11111111111
Q ss_pred -----hhhHHHHhh--hhcCCCCh-----hHHHHHHHHHHHHhhccCCCCCccc
Q 004388 620 -----EDNLAEILD--AQAGDWPI-----KETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 620 -----~~~l~~~ld--~~~~~~p~-----~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.+.+.+++- ...+.+|. .....|.+.+..||..|+..|-|+.
T Consensus 441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 122222221 22344443 3456789999999999999999987
No 373
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.3e-32 Score=303.79 Aligned_cols=249 Identities=25% Similarity=0.406 Sum_probs=204.3
Q ss_pred ccceeeccCCcEEEEEEEEC------CeEEEEEEEccCC-chhhHHHHHHHHHHHhcCCCceeeecccccCCc-eEEEEe
Q 004388 406 SENLRIGMGGYGTVYKGTFH------HTFAAVKVLQSKG-NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG-CLVYEY 477 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~------~~~vAvK~l~~~~-~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~-~LV~Ey 477 (757)
...++||.|+||+||+|.+- +-+||+|++.... .....+|+.|+-+|.+++|||+++|+|+|.... -||.+|
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~ 778 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL 778 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence 34568999999999999873 2389999987654 445678999999999999999999999997654 689999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|++|+|.|++...+. .+..+..+.|..|||+|+.|||.+. +|||||-..||||....++||.|||+++.+..+..
T Consensus 779 mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred cccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999976443 4888899999999999999999877 99999999999999999999999999999887654
Q ss_pred CccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHhhhh-cCCCC
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEILDAQ-AGDWP 635 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~ld~~-~~~~p 635 (757)
. |...+..-.+.|||-|.+....|+.++|||||||++||++| |..|+.... ...+.+++... ....|
T Consensus 854 e----y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~-------~~eI~dlle~geRLsqP 922 (1177)
T KOG1025|consen 854 E----YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP-------AEEIPDLLEKGERLSQP 922 (1177)
T ss_pred c----ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC-------HHHhhHHHhccccCCCC
Confidence 3 33344455778999999999999999999999999999998 888875321 12223333322 34567
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
+.++.++.-++.+||..|+..||.+++ +...+.++
T Consensus 923 piCtiDVy~~mvkCwmid~~~rp~fke-l~~~fs~~ 957 (1177)
T KOG1025|consen 923 PICTIDVYMVMVKCWMIDADSRPTFKE-LAEEFSRM 957 (1177)
T ss_pred CCccHHHHHHHHHHhccCcccCccHHH-HHHHHHHH
Confidence 788999999999999999999999985 44444333
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.7e-31 Score=275.20 Aligned_cols=219 Identities=20% Similarity=0.172 Sum_probs=175.3
Q ss_pred CCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCHHHHHhh
Q 004388 414 GGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSLEDRLYR 489 (757)
Q Consensus 414 G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL~~~L~~ 489 (757)
|.||.||++.+. +..+|+|.+.... .+.+|...+....||||+++++++.+.. ++||||++||+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999884 5689999987543 2344555566667999999999986543 899999999999998865
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCc
Q 004388 490 KNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPV 569 (757)
Q Consensus 490 ~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~ 569 (757)
.. .+++.....++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ....
T Consensus 79 ~~---~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---------~~~~ 143 (237)
T cd05576 79 FL---NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---------DGEA 143 (237)
T ss_pred hc---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc---------ccCC
Confidence 43 4899999999999999999999987 9999999999999999999999999886554321 2235
Q ss_pred ccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHH
Q 004388 570 GTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSC 649 (757)
Q Consensus 570 gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~C 649 (757)
++..|+|||+..++.++.++||||||+++|+|++|+.|+....... . .......|...+..+.+++.+|
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~li~~~ 212 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---N--------THTTLNIPEWVSEEARSLLQQL 212 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---c--------cccccCCcccCCHHHHHHHHHH
Confidence 6778999999988889999999999999999999998875321100 0 0001123444567899999999
Q ss_pred hhccCCCCCccchh
Q 004388 650 AELRRKDRPDLKNQ 663 (757)
Q Consensus 650 l~~~p~~RPs~~~~ 663 (757)
++.||.+||++.+.
T Consensus 213 l~~dp~~R~~~~~~ 226 (237)
T cd05576 213 LQFNPTERLGAGVA 226 (237)
T ss_pred ccCCHHHhcCCCcc
Confidence 99999999998643
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.9e-31 Score=292.02 Aligned_cols=246 Identities=22% Similarity=0.271 Sum_probs=189.3
Q ss_pred HhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC-----
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH----- 470 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~----- 470 (757)
...++|.....||.|+||.||+|... +..||||++.... ......+.+|+.++++++|||++++++++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34668999999999999999999985 5689999876432 22345678899999999999999999877422
Q ss_pred ---ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeec
Q 004388 471 ---GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVG 547 (757)
Q Consensus 471 ---~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFG 547 (757)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccc
Confidence 47999998 6799998754 34899999999999999999999988 9999999999999999999999999
Q ss_pred CccccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh--------
Q 004388 548 LSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI-------- 618 (757)
Q Consensus 548 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~-------- 618 (757)
++...... .....++..|+|||.+.+ ..++.++|||||||++|+|+||+.||..........
T Consensus 164 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~ 234 (343)
T cd07851 164 LARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGT 234 (343)
T ss_pred cccccccc---------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Confidence 99865432 133468899999998755 367899999999999999999999996432211100
Q ss_pred ---------chhhHHHHhhhhcC----C---CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 619 ---------DEDNLAEILDAQAG----D---WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 619 ---------~~~~l~~~ld~~~~----~---~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
........+..... . .....+..+.+++.+||..+|.+||++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~e 294 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAE 294 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence 00000000000000 0 00123678999999999999999999885
No 376
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=281.89 Aligned_cols=257 Identities=26% Similarity=0.399 Sum_probs=192.1
Q ss_pred CCccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHh--cCCCceeeecccccC-C-----ceEEE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSK--IRHPHLLLLLGACPD-H-----GCLVY 475 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~--l~Hpniv~l~g~~~~-~-----~~LV~ 475 (757)
.......||+|.||.||+|.|.|..||||++.... ...+.+|.+|... |+|+||+.|+++-.. . .+||.
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 45556789999999999999999999999997654 3456778888764 599999999988532 2 27999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-----CCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-----TKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-----~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
+|-++|||.|+|.+. .++-...++++.-+|.||++||. ++.+.|.|||||+.|||+..||.+-|+|+|||-
T Consensus 289 dYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 289 DYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred ecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 999999999999763 37888999999999999999996 455679999999999999999999999999997
Q ss_pred ccCCCCCCccccccccCCcccccCCCccccccCC----C--CCcchhhhHHHHHHHHHhC----------CCCccccchh
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGL----I--SPKSDVYAYGMVILQLLTA----------KPAIAITHKV 614 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~--s~ksDvwSlGvil~elltG----------~~Pf~~~~~~ 614 (757)
..+...+. ........+||-.|||||++.... + -..+||||||.|+||+.-. ++||...-..
T Consensus 365 ~h~~~t~~--idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~ 442 (513)
T KOG2052|consen 365 RHDSDTDT--IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS 442 (513)
T ss_pred EecccCCc--ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC
Confidence 76654322 222335569999999999875432 1 2358999999999999863 4676532222
Q ss_pred hhhhchhhHHHHh--hhhcCC----CC-hhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 615 ETAIDEDNLAEIL--DAQAGD----WP-IKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 615 ~~~~~~~~l~~~l--d~~~~~----~p-~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
+.. .+.+.+++ +...+. |. ......+.+|+..||..+|.-|-++- .+-+.|.++.
T Consensus 443 DPs--~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltAL-riKKtl~~l~ 504 (513)
T KOG2052|consen 443 DPS--FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTAL-RIKKTLAKLS 504 (513)
T ss_pred CCC--HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHH-HHHHHHHHHh
Confidence 211 11222221 111222 22 24567899999999999999998865 3445554443
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3.7e-31 Score=313.48 Aligned_cols=143 Identities=30% Similarity=0.366 Sum_probs=125.3
Q ss_pred cCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCc---hhhHHHHHHHHHHHhcCCCceeeecccccCC--ceEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN---IQNKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVY 475 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~ 475 (757)
++|....+||.|+||.||+|.+. +..||||++..... .....+..|+.++..++||||+++++++... .||||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 47888899999999999999987 67999999875432 2345688999999999999999999888544 48999
Q ss_pred EecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 476 EYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 476 Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
||+.|++|.+++...+ .+++..+..|+.||+.||.|||..+ ||||||||+||||+.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999886543 4788899999999999999999987 99999999999999999999999999863
No 378
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-31 Score=307.50 Aligned_cols=254 Identities=25% Similarity=0.471 Sum_probs=202.8
Q ss_pred CCccceeeccCCcEEEEEEEEC---------CeEEEEEEEccCCc-hhhHHHHHHHHHHHhc-CCCceeeecccccCCc-
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH---------HTFAAVKVLQSKGN-IQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG- 471 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~---------~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~- 471 (757)
+......||.|.||.|++|... ...||||.++.... ...+.+..|+++|+.+ .||||+.++|+|....
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~ 376 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP 376 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence 3344458999999999999753 34799999886543 4567799999999998 5999999999997743
Q ss_pred -eEEEEecCCCCHHHHHhhcC-----CC--------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC
Q 004388 472 -CLVYEYMENGSLEDRLYRKN-----NT--------PPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH 537 (757)
Q Consensus 472 -~LV~Ey~~~gsL~~~L~~~~-----~~--------~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~ 537 (757)
++|+||+..|+|.++|.... .. ..++....+.++.|||.|+.||++.+ +|||||-..|||+..
T Consensus 377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLITK 453 (609)
T ss_pred eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecC
Confidence 88999999999999998765 01 13888999999999999999999987 999999999999999
Q ss_pred CCceEEeeecCccccCCCCCCccccccccCCcc--cccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchh
Q 004388 538 NLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVG--TLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKV 614 (757)
Q Consensus 538 ~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~ 614 (757)
+..+||+|||+|+.......+ ......| ...|||||.+....|+.++|||||||+||||+| |..|+.....
T Consensus 454 ~~~~kIaDFGlar~~~~~~~y-----~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~- 527 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKDYY-----RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP- 527 (609)
T ss_pred CCEEEEccccceeccCCCCce-----EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-
Confidence 999999999999976554322 2222233 344999999999999999999999999999998 7788854110
Q ss_pred hhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 615 ETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 615 ~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
..+.+..+-+......|..+..++.+++..||+.+|.+||++.+ +...++.+
T Consensus 528 ----~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~-~~~~~~~~ 579 (609)
T KOG0200|consen 528 ----TEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSE-CVEFFEKH 579 (609)
T ss_pred ----HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHH-HHHHHHHH
Confidence 11112223333455678888999999999999999999999994 66666653
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-31 Score=297.61 Aligned_cols=246 Identities=26% Similarity=0.374 Sum_probs=204.1
Q ss_pred HhhcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccc-------cC
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGAC-------PD 469 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~-------~~ 469 (757)
.-+.-|.+...||.|.||.||+++. .++.+|+|++...... .+++..|.+||+.+ .|||++.++|++ .|
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 3456688888999999999998865 5679999999876543 45677899999887 699999999997 34
Q ss_pred CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 470 HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 470 ~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
...||||||.|||..|++.... +..+.|..+..|+.+++.||.+||.++ ++|||||=.||||+.++.+||+|||++
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeee
Confidence 4589999999999999887655 566999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCcccccCCCccccccC-----CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHH
Q 004388 550 TMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-----LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLA 624 (757)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~ 624 (757)
..+... ..+....+|||+|||||++... .|+..+|+||||++..||--|.||+...|.+...+...
T Consensus 171 aQldsT------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip--- 241 (953)
T KOG0587|consen 171 AQLDST------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP--- 241 (953)
T ss_pred eeeecc------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC---
Confidence 877643 3345667999999999987543 47889999999999999999999998888776543211
Q ss_pred HHhhhh--cCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 625 EILDAQ--AGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 625 ~~ld~~--~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
... ....|...+.++.++|..||..|...||++.+
T Consensus 242 ---RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ 278 (953)
T KOG0587|consen 242 ---RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEE 278 (953)
T ss_pred ---CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhh
Confidence 100 01224567889999999999999999999874
No 380
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=271.28 Aligned_cols=246 Identities=23% Similarity=0.263 Sum_probs=199.7
Q ss_pred hcCCccceeeccCCcEEEEEEEECCe--EEEEEEEccCC---chhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKG---NIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CL 473 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~---~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~L 473 (757)
.++|.....||+|+|+.|..+++..+ .+|+|++++.. ..+.+-.+.|-.+..+. +||.+|.|..+|+... ++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 35688889999999999999998765 89999987543 23344566787777765 7999999999997654 88
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
|.||++||+|.-.+.+.. .+|...+..+..+|+.||.|||+.+ ||+||||.+|+|||..|++||+|+|+++.--
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999977665544 4888888889999999999999988 9999999999999999999999999997543
Q ss_pred CCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccch-hhhhhchhhHHHHhhhhcC
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHK-VETAIDEDNLAEILDAQAG 632 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~-~~~~~~~~~l~~~ld~~~~ 632 (757)
.+.+. ....+|||.|+|||++++..|+..+|+|+|||+++||+.|+.||++... ......++.+.+++-...-
T Consensus 403 ~~gd~------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi 476 (593)
T KOG0695|consen 403 GPGDT------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI 476 (593)
T ss_pred CCCcc------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc
Confidence 33221 2457999999999999999999999999999999999999999985421 1112234556666655555
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCCc
Q 004388 633 DWPIKETKELAALGLSCAELRRKDRPD 659 (757)
Q Consensus 633 ~~p~~~~~~l~~Li~~Cl~~~p~~RPs 659 (757)
..|...+-....++..-+..||++|-.
T Consensus 477 riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 477 RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 567677778888899999999999854
No 381
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=285.20 Aligned_cols=238 Identities=23% Similarity=0.344 Sum_probs=188.0
Q ss_pred ceeeccCCcEEEEEEEEC--CeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeeccccc--CCceEEEEecCCC
Q 004388 408 NLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACP--DHGCLVYEYMENG 481 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~--~~~~LV~Ey~~~g 481 (757)
...||.|-||+||-|.++ |+.||||++.+.. ..+..++.+|+.||.+++||.||.|-..|. +..++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 457999999999999875 5699999987542 334577899999999999999999998884 5559999999755
Q ss_pred CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC---CceEEeeecCccccCCCCCC
Q 004388 482 SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN---LVSKIGDVGLSTMLNSDPSF 558 (757)
Q Consensus 482 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~---~~~KL~DFGla~~~~~~~~~ 558 (757)
=|+-+|.... ..|+......++.||+.||.|||-.+ |+|+||||+||||... -.+||||||+|+++....
T Consensus 649 MLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-- 721 (888)
T KOG4236|consen 649 MLEMILSSEK--GRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-- 721 (888)
T ss_pred HHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhh--
Confidence 5555554433 24888888889999999999999988 9999999999999654 468999999999987532
Q ss_pred ccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhH
Q 004388 559 VSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKE 638 (757)
Q Consensus 559 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~ 638 (757)
-....+|||.|+|||++++..|+..-|+||.|||+|--|.|..||.-...+...+.+..+ ......| .+.
T Consensus 722 -----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF----MyPp~PW-~ei 791 (888)
T KOG4236|consen 722 -----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF----MYPPNPW-SEI 791 (888)
T ss_pred -----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc----ccCCCch-hhc
Confidence 125579999999999999999999999999999999999999999644443333222111 0001122 145
Q ss_pred HHHHHHHHHHHhhccCCCCCccch
Q 004388 639 TKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 639 ~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+....+||...|+..-++|-+...
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk 815 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDK 815 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHh
Confidence 678899999999999999987653
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=4.5e-30 Score=263.25 Aligned_cols=230 Identities=29% Similarity=0.409 Sum_probs=188.4
Q ss_pred CcEEEEEEEECC--eEEEEEEEccCCchh-hHHHHHHHHHHHhcCCCceeeecccccCC--ceEEEEecCCCCHHHHHhh
Q 004388 415 GYGTVYKGTFHH--TFAAVKVLQSKGNIQ-NKQFLQELEVLSKIRHPHLLLLLGACPDH--GCLVYEYMENGSLEDRLYR 489 (757)
Q Consensus 415 ~~G~Vyk~~~~~--~~vAvK~l~~~~~~~-~~~f~~Ev~il~~l~Hpniv~l~g~~~~~--~~LV~Ey~~~gsL~~~L~~ 489 (757)
+||.||+|...+ ..+++|++....... .+.+.+|+.++++++|||++++++++... .+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 689999999864 789999998765444 67899999999999999999999998653 4899999999999998865
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCc
Q 004388 490 KNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPV 569 (757)
Q Consensus 490 ~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~ 569 (757)
... +++..+..++.+++.+|.|||..+ ++|+||+|.||+++.++.++|+|||++....... ......
T Consensus 81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~ 147 (244)
T smart00220 81 RGR---LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------LLTTFV 147 (244)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc-------cccccc
Confidence 432 888999999999999999999987 9999999999999999999999999998776432 123457
Q ss_pred ccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChh---HHHHHHHHH
Q 004388 570 GTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIK---ETKELAALG 646 (757)
Q Consensus 570 gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~---~~~~l~~Li 646 (757)
++..|++||.+....++.++||||||+++++|++|..||...... ..+.+.+.......... .+..+.+++
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 221 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL------LELFKKIGKPKPPFPPPEWKISPEAKDLI 221 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH------HHHHHHHhccCCCCccccccCCHHHHHHH
Confidence 889999999998888999999999999999999999999642211 12222222222222211 567899999
Q ss_pred HHHhhccCCCCCccchh
Q 004388 647 LSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 647 ~~Cl~~~p~~RPs~~~~ 663 (757)
.+|+..+|.+||++.+.
T Consensus 222 ~~~l~~~p~~Rp~~~~~ 238 (244)
T smart00220 222 RKLLVKDPEKRLTAEEA 238 (244)
T ss_pred HHHccCCchhccCHHHH
Confidence 99999999999999853
No 383
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-31 Score=290.01 Aligned_cols=234 Identities=23% Similarity=0.297 Sum_probs=187.8
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~E 476 (757)
+..|.....+|.|+|+.|-.+... +...+||++.... .+-.+|+.++... .||||+++.+.|.+.. ++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 556777778999999999999875 4588999987652 2234678777666 6999999999998765 89999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee-cCCCceEEeeecCccccCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL-DHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl-d~~~~~KL~DFGla~~~~~~ 555 (757)
++.||-|.+.+..... +. ..+..|+.+|+.|+.|||.++ +|||||||+|||+ +..|+++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999988887765442 22 567789999999999999987 9999999999999 68999999999999987654
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
....+-|..|.|||++....|+.++||||||++||+||||+.||.....- ..+...+ ..+...
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i--~~~~~s 532 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRI--QMPKFS 532 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhh--cCCccc
Confidence 12346789999999999889999999999999999999999999632111 1111111 112233
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 636 IKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 636 ~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
...+...++|+.+||+.+|.+||++.+.
T Consensus 533 ~~vS~~AKdLl~~LL~~dP~~Rl~~~~i 560 (612)
T KOG0603|consen 533 ECVSDEAKDLLQQLLQVDPALRLGADEI 560 (612)
T ss_pred cccCHHHHHHHHHhccCChhhCcChhhh
Confidence 5678899999999999999999999853
No 384
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=270.44 Aligned_cols=236 Identities=28% Similarity=0.359 Sum_probs=181.3
Q ss_pred eeeccCCcEEEEEEEEC--CeEEEEEEEccCCc-hhhHHHHHHHHHHHhc-CCCceeeecccccCC-c-eEEEEecCCCC
Q 004388 409 LRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGN-IQNKQFLQELEVLSKI-RHPHLLLLLGACPDH-G-CLVYEYMENGS 482 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~-~-~LV~Ey~~~gs 482 (757)
..||.|.||+|+|-.++ +...|||.++.... ....+|+.|.++..+- +-||||++||++-.+ . .+.||+|. .|
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~S 148 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-IS 148 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hh
Confidence 35999999999998886 55889999987654 4566788899876655 689999999997544 3 58899995 67
Q ss_pred HHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 483 LEDRLYR--KNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 483 L~~~L~~--~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+.+... ......+++...-.|......||.||-... .|||||+||+|||||..|.+||||||++-.+.+.-
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si---- 222 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI---- 222 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHH----
Confidence 7654332 111234888888889999999999998754 29999999999999999999999999997765432
Q ss_pred ccccccCCcccccCCCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC---
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRT--GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP--- 635 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p--- 635 (757)
..+..+|...|||||.+.. ..|+.+|||||||++|||+.||+.|+..-..+ .+.+..+ ..++.|
T Consensus 223 ---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv-----feql~~V---v~gdpp~l~ 291 (361)
T KOG1006|consen 223 ---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV-----FEQLCQV---VIGDPPILL 291 (361)
T ss_pred ---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH-----HHHHHHH---HcCCCCeec
Confidence 2355689999999997743 34899999999999999999999998522111 1111111 123322
Q ss_pred -----hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 -----IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 -----~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..+..++..|+..+..+||.+.+
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~ 323 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDD 323 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhh
Confidence 246788999999999999999999874
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.7e-31 Score=263.76 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=187.4
Q ss_pred CccceeeccCCcEEEEEEEECCe--EEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccC-----C-----
Q 004388 405 FSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPD-----H----- 470 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~-----~----- 470 (757)
|....+||+|.||.||+++.+++ .||+|+.-.+ ...-...-++|+.+|..|.|+|++.++..|.. .
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 45566899999999999987654 6777754321 12223345789999999999999999999832 1
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.||||.+|+. +|.-+|.... ..++..++.+++.++..||.|+|..+ |+|||+||+|+||+.+|.+||+|||+++
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccccc
Confidence 3799999974 7888775432 34788899999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccc-----------------
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITH----------------- 612 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~----------------- 612 (757)
.+......... +.+..+-|.+|.+||.+.+ ..|+++.|||..|||+.||+||.+.|....
T Consensus 173 ~fs~~~n~~kp--rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 173 AFSTSKNVVKP--RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ceecccccCCC--CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 77654432222 3466788999999997655 569999999999999999999999886322
Q ss_pred hhhhhhchhhHHHHhhhh-cCC----------CChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 613 KVETAIDEDNLAEILDAQ-AGD----------WPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 613 ~~~~~~~~~~l~~~ld~~-~~~----------~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.++...++-.+.+.+... .+. .|..-.....+|+.+++.+||.+|++..+
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~ 311 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQ 311 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHh
Confidence 222222222222222110 000 11222347889999999999999999875
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=5.8e-29 Score=282.00 Aligned_cols=254 Identities=20% Similarity=0.242 Sum_probs=177.2
Q ss_pred hhcCCccceeeccCCcEEEEEEEE------------------CCeEEEEEEEccCCchhhHHH--------------HHH
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTF------------------HHTFAAVKVLQSKGNIQNKQF--------------LQE 448 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~------------------~~~~vAvK~l~~~~~~~~~~f--------------~~E 448 (757)
..++|...++||+|+||.||+|.+ .++.||||.+........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 366899999999999999999964 235799999875543333333 346
Q ss_pred HHHHHhcCCCce-----eeecccccC----------CceEEEEecCCCCHHHHHhhcCC---------------------
Q 004388 449 LEVLSKIRHPHL-----LLLLGACPD----------HGCLVYEYMENGSLEDRLYRKNN--------------------- 492 (757)
Q Consensus 449 v~il~~l~Hpni-----v~l~g~~~~----------~~~LV~Ey~~~gsL~~~L~~~~~--------------------- 492 (757)
+.++.+++|.++ +.++++|.. ..+|||||+++|+|.++|.....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777876654 677777642 23899999999999999874321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcccc
Q 004388 493 TPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTL 572 (757)
Q Consensus 493 ~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~ 572 (757)
...++|..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......... ......+|+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-----~~~~g~~tp 374 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-----NPLYGMLDP 374 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-----CccccCCCc
Confidence 113467788899999999999999987 999999999999999999999999999765432211 112234589
Q ss_pred cCCCccccccCC----------------------CCCcchhhhHHHHHHHHHhCCC-Cccccchhhhhhch--hhH--HH
Q 004388 573 CYIDPEYQRTGL----------------------ISPKSDVYAYGMVILQLLTAKP-AIAITHKVETAIDE--DNL--AE 625 (757)
Q Consensus 573 ~Y~aPE~~~~~~----------------------~s~ksDvwSlGvil~elltG~~-Pf~~~~~~~~~~~~--~~l--~~ 625 (757)
.|+|||.+.... ...+.||||+|||||+|++|.. ||.........+.. ..+ +.
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 999999765322 1234799999999999999975 76532222111110 000 11
Q ss_pred HhhhhcCCCC--hhHHHHHHHHHHHHhhccC---CCCCccch
Q 004388 626 ILDAQAGDWP--IKETKELAALGLSCAELRR---KDRPDLKN 662 (757)
Q Consensus 626 ~ld~~~~~~p--~~~~~~l~~Li~~Cl~~~p---~~RPs~~~ 662 (757)
.......+++ ...+....+|+.+++..+| .+|+++.+
T Consensus 455 ~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e 496 (507)
T PLN03224 455 MYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQ 496 (507)
T ss_pred hhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence 1111111111 1246778999999999766 68999885
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9.5e-30 Score=265.45 Aligned_cols=248 Identities=25% Similarity=0.339 Sum_probs=188.8
Q ss_pred hcCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhcCC--Cc----eeeeccccc--CCc
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKIRH--PH----LLLLLGACP--DHG 471 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~H--pn----iv~l~g~~~--~~~ 471 (757)
++.|.....+|+|.||.|-.+.+.. ..||||+++.-.. -.+.-+-|+++|.+|.+ |+ +|.+.++|. .+.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 6678888899999999999998864 4899999875322 23445679999999942 22 677878775 445
Q ss_pred eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec---------------
Q 004388 472 CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD--------------- 536 (757)
Q Consensus 472 ~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld--------------- 536 (757)
|||+|.+ |.|+.|+|..++ ..+++...+..|+.|++.++.|||..+ ++|-||||+|||+.
T Consensus 167 Civfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence 9999998 569999996544 457999999999999999999999999 99999999999993
Q ss_pred -----CCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCcccc
Q 004388 537 -----HNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAIT 611 (757)
Q Consensus 537 -----~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~ 611 (757)
.+..+||+|||.|+...... ...+.|..|.|||++.+-.++.++||||+||||+||.||...|...
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h---------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH---------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc---------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 13458999999998755432 4458899999999999999999999999999999999999888643
Q ss_pred chhhhh--------------hchhhHHHHhhhhcCCCCh-------------------------hHHHHHHHHHHHHhhc
Q 004388 612 HKVETA--------------IDEDNLAEILDAQAGDWPI-------------------------KETKELAALGLSCAEL 652 (757)
Q Consensus 612 ~~~~~~--------------~~~~~l~~~ld~~~~~~p~-------------------------~~~~~l~~Li~~Cl~~ 652 (757)
...+.. +....-.+.......+||. .+...|.+|+.+||.+
T Consensus 313 en~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 313 ENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred CcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 322211 0000000111111122321 3456799999999999
Q ss_pred cCCCCCccchhh
Q 004388 653 RRKDRPDLKNQV 664 (757)
Q Consensus 653 ~p~~RPs~~~~v 664 (757)
||.+|+++.+.+
T Consensus 393 DP~~RiTl~EAL 404 (415)
T KOG0671|consen 393 DPARRITLREAL 404 (415)
T ss_pred CccccccHHHHh
Confidence 999999998643
No 388
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=7.1e-29 Score=287.53 Aligned_cols=250 Identities=20% Similarity=0.214 Sum_probs=160.9
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC------CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccc-------
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH------HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGAC------- 467 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~------~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~------- 467 (757)
..++|...++||+|+||.||+|.+. +..||||.+..... .+.+..+ .+....+.++..++..+
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 3567899999999999999999985 45899998764321 1111111 12222233333332221
Q ss_pred -cCCceEEEEecCCCCHHHHHhhcCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCC
Q 004388 468 -PDHGCLVYEYMENGSLEDRLYRKNNT-----------------PPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMK 529 (757)
Q Consensus 468 -~~~~~LV~Ey~~~gsL~~~L~~~~~~-----------------~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLK 529 (757)
.+..+|||||+.+++|.+++...... .......+..|+.||+.||.|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 22348999999999999988653210 00112334578999999999999987 9999999
Q ss_pred CCCeeecC-CCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccC----------------------CCC
Q 004388 530 PGNILLDH-NLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG----------------------LIS 586 (757)
Q Consensus 530 p~NILld~-~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------------------~~s 586 (757)
|+||||+. ++.+||+|||+|+.+..... +......||+.|+|||.+... .++
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-----~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-----YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-----cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 99999986 68999999999986543322 222456889999999954322 234
Q ss_pred CcchhhhHHHHHHHHHhCCCCccccch-hhhhhc-----hhhHHHHhhhhcC-CCC------hhHHHHHHHHHHHHhhcc
Q 004388 587 PKSDVYAYGMVILQLLTAKPAIAITHK-VETAID-----EDNLAEILDAQAG-DWP------IKETKELAALGLSCAELR 653 (757)
Q Consensus 587 ~ksDvwSlGvil~elltG~~Pf~~~~~-~~~~~~-----~~~l~~~ld~~~~-~~p------~~~~~~l~~Li~~Cl~~~ 653 (757)
.++|||||||+||||+++..++..... ....+. ...+...+..... +.. ........+|+.+||+.|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 567999999999999998766542100 000000 0011111111100 000 001223458999999999
Q ss_pred CCCCCccch
Q 004388 654 RKDRPDLKN 662 (757)
Q Consensus 654 p~~RPs~~~ 662 (757)
|++||++.+
T Consensus 438 P~kR~ta~e 446 (566)
T PLN03225 438 GRQRISAKA 446 (566)
T ss_pred cccCCCHHH
Confidence 999999885
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-30 Score=291.02 Aligned_cols=244 Identities=27% Similarity=0.338 Sum_probs=185.2
Q ss_pred CccceeeccCCcEE-EEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCC
Q 004388 405 FSENLRIGMGGYGT-VYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 405 f~~~~~IG~G~~G~-Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
|.....+|.|+-|+ ||+|.+.++.||||.+-... ..-..+||..|+.- .|||||++||.=.+.. ||..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~- 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA- 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-
Confidence 55556689998875 89999999999999875432 22346899999887 5999999998876554 88999995
Q ss_pred CCHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-----CCceEEeeecCccccCC
Q 004388 481 GSLEDRLYRKNNT-PPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-----NLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 481 gsL~~~L~~~~~~-~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-----~~~~KL~DFGla~~~~~ 554 (757)
.+|.|++...... ..........++.|++.||++||+.+ ||||||||.||||+. ...++|+|||+++.+..
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 7999999763111 11111344678899999999999988 999999999999975 25789999999999887
Q ss_pred CCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhC-CCCccccchhhhhhchhhHHHHhhhhcCC
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTA-KPAIAITHKVETAIDEDNLAEILDAQAGD 633 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~ 633 (757)
+...... ..+..||-+|+|||++....-+.++|||||||++|+.++| .+||+..-.-+..+-.+...-. .-
T Consensus 664 ~~sS~~r---~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~-----~L 735 (903)
T KOG1027|consen 664 GKSSFSR---LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLV-----HL 735 (903)
T ss_pred Ccchhhc---ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcccee-----ee
Confidence 6643332 4677999999999999988888899999999999999987 8999854333222222211000 00
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 634 WPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 634 ~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
.|.... +..+||.+|+.++|..||++.+++
T Consensus 736 ~~~~d~-eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 736 EPLPDC-EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred ccCchH-HHHHHHHHhcCCCcccCCCHHHHh
Confidence 111111 789999999999999999998644
No 390
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-29 Score=236.06 Aligned_cols=195 Identities=24% Similarity=0.379 Sum_probs=159.8
Q ss_pred CCccceeeccCCcEEEEEEEECCe--EEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEe
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEY 477 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey 477 (757)
+|....+||+|.||+||+|+..++ .||+|..+.+. .......++|+-+|+.+.|.|||++++...... -||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 344556899999999999988654 89999877553 334566789999999999999999999875433 799999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|. .+|..+.....+ .++......++.|++.||.|+|+++ +.||||||.|.||+.||.+|++|||+++.+.-...
T Consensus 83 cd-qdlkkyfdslng--~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred hh-HHHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 96 578777655433 4777888899999999999999998 99999999999999999999999999997764321
Q ss_pred CccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHh-CCCCccc
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLT-AKPAIAI 610 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~ellt-G~~Pf~~ 610 (757)
.....+-|.+|.+|.++.+. .|+...|+||.|||+.|+.. |+|.|..
T Consensus 157 ------cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 157 ------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred ------eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 12345789999999988765 48899999999999999986 5555543
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=8e-29 Score=238.82 Aligned_cols=193 Identities=30% Similarity=0.407 Sum_probs=156.4
Q ss_pred cceeeccCCcEEEEEEEE--CCeEEEEEEEccCCc-hhhHHHHHHHHHHHhc-CCCceeeecccccCCc--eEEEEecCC
Q 004388 407 ENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGN-IQNKQFLQELEVLSKI-RHPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 407 ~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l-~Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
....||+|+||.|-+-++ .++..|+|.+...-. +...+.++|+++..+. ..|.+|.|||...+.+ .+.||.|.
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~- 128 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD- 128 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-
Confidence 345699999999876655 578999999876543 3445678899987665 6999999999875544 78999995
Q ss_pred CCHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 481 GSLEDRLYR-KNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 481 gsL~~~L~~-~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
.||..+..+ -.....+++...-+|+..+..||.|||+.- .+||||+||+|||++.+|++||||||++-.+.+...
T Consensus 129 tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA-- 204 (282)
T KOG0984|consen 129 TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA-- 204 (282)
T ss_pred hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhhH--
Confidence 688765443 122345889999999999999999999975 499999999999999999999999999988765432
Q ss_pred cccccccCCcccccCCCcccccc----CCCCCcchhhhHHHHHHHHHhCCCCcc
Q 004388 560 STTYKNTGPVGTLCYIDPEYQRT----GLISPKSDVYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~ksDvwSlGvil~elltG~~Pf~ 609 (757)
.+...|.-.|||||.+.. ..|+.++||||||+++.||.+++.||.
T Consensus 205 -----kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 205 -----KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred -----HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 233578889999997643 368999999999999999999999985
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.7e-29 Score=248.68 Aligned_cols=198 Identities=25% Similarity=0.369 Sum_probs=161.9
Q ss_pred CCccceeeccCCcEEEEEEEEC--CeEEEEEEEccC--CchhhHHHHHHHHHHHhcCCCceeeecccccC-------Cce
Q 004388 404 SFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQNKQFLQELEVLSKIRHPHLLLLLGACPD-------HGC 472 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~-------~~~ 472 (757)
+.+..+.||-|+||.||.+++. ++.||+|++..- .-...+.+.+|+.+|.-++|.|++..++..+. +.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4566788999999999999874 678999987543 22345778999999999999999999887643 236
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcccc
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTML 552 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~ 552 (757)
++.|+|. .+|..++..- ..++...+.-++.||++||.|||+.+ |.||||||.|.|++.|..+||||||+++..
T Consensus 134 V~TELmQ-SDLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHH-hhhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEeccccccccc
Confidence 7888885 5787776542 24666777888999999999999998 999999999999999999999999999987
Q ss_pred CCCCCCccccccccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccch
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHK 613 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~ 613 (757)
..+.. ..++..+-|-+|.|||++.+. .|+.+.||||.|||+.|||..+..|.....
T Consensus 207 e~d~~-----~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 207 DQRDR-----LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred chhhh-----hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 65442 234556889999999988764 699999999999999999999887764433
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=6.2e-28 Score=235.68 Aligned_cols=243 Identities=21% Similarity=0.393 Sum_probs=188.0
Q ss_pred hcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcC-CCceeeecccccCCc----eEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG----CLV 474 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~----~LV 474 (757)
.++|+..+++|+|.|+.||.|.. ++..++||++++ ...+.+.+|+.||..|+ ||||+.|++...+.. .||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 45788899999999999999984 566899999976 34567889999999997 999999999987654 799
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecCccccC
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGLSTMLN 553 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGla~~~~ 553 (757)
+||+.+.+...+. +.++...+..++.+++.||.|||+.| |+|||+||.|+++|.. ..++|+|+|||.++.
T Consensus 114 FE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcC
Confidence 9999998876643 23666788889999999999999998 9999999999999864 679999999999887
Q ss_pred CCCCCccccccccCCcccccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhh-------chhhHHH
Q 004388 554 SDPSFVSTTYKNTGPVGTLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAI-------DEDNLAE 625 (757)
Q Consensus 554 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~-------~~~~l~~ 625 (757)
+..... -.+.+..|--||.+.. ..|+..-|+|||||+|..|+..+.||...+..-..+ ..+.+..
T Consensus 185 p~~eYn-------VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~ 257 (338)
T KOG0668|consen 185 PGKEYN-------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYA 257 (338)
T ss_pred CCceee-------eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHH
Confidence 655432 2356778899997654 568899999999999999999999996433221111 1111222
Q ss_pred Hhhhh----------------cCCCCh--------hHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 626 ILDAQ----------------AGDWPI--------KETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 626 ~ld~~----------------~~~~p~--------~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
.+... ...|.. -..++..+|+.+.|.+|-.+|||+.+.
T Consensus 258 Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEa 319 (338)
T KOG0668|consen 258 YLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEA 319 (338)
T ss_pred HHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHH
Confidence 11111 111211 124788899999999999999998863
No 394
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.2e-26 Score=231.40 Aligned_cols=203 Identities=37% Similarity=0.569 Sum_probs=176.4
Q ss_pred eccCCcEEEEEEEEC--CeEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccC--CceEEEEecCCCCHHH
Q 004388 411 IGMGGYGTVYKGTFH--HTFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPD--HGCLVYEYMENGSLED 485 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~~~LV~Ey~~~gsL~~ 485 (757)
||.|++|.||++... +..+++|++...... ....+.+|+.++..+.|++++++++++.. ..+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999997 779999998865432 34678999999999999999999999876 4589999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-CCceEEeeecCccccCCCCCCcccccc
Q 004388 486 RLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-NLVSKIGDVGLSTMLNSDPSFVSTTYK 564 (757)
Q Consensus 486 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-~~~~KL~DFGla~~~~~~~~~~~~~~~ 564 (757)
++.... ..+++..+..++.+++.+|.|||..+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------~ 149 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------L 149 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc------h
Confidence 886542 35888999999999999999999987 999999999999999 89999999999987654321 1
Q ss_pred ccCCcccccCCCccccccC-CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHH
Q 004388 565 NTGPVGTLCYIDPEYQRTG-LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELA 643 (757)
Q Consensus 565 ~~~~~gt~~Y~aPE~~~~~-~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~ 643 (757)
.....+...|++||.+... .++.+.|+|+||+++++| ..+.
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------~~~~ 191 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------PELK 191 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------HHHH
Confidence 2334678899999998877 788999999999999998 5788
Q ss_pred HHHHHHhhccCCCCCccch
Q 004388 644 ALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 644 ~Li~~Cl~~~p~~RPs~~~ 662 (757)
+++..|+..+|.+||++.+
T Consensus 192 ~~l~~~l~~~p~~R~~~~~ 210 (215)
T cd00180 192 DLIRKMLQKDPEKRPSAKE 210 (215)
T ss_pred HHHHHHhhCCcccCcCHHH
Confidence 9999999999999999874
No 395
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.3e-27 Score=249.60 Aligned_cols=129 Identities=27% Similarity=0.444 Sum_probs=107.2
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcC-----C---CceeeecccccC--
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIR-----H---PHLLLLLGACPD-- 469 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-----H---pniv~l~g~~~~-- 469 (757)
...|-..++||.|.|++||++.+. .+.||+|+.+...- -.+..+.||.+|++++ | .+||+|++.|.-
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 356888899999999999999875 56999999876432 3345678999999984 3 469999999842
Q ss_pred ----CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee
Q 004388 470 ----HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL 535 (757)
Q Consensus 470 ----~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl 535 (757)
+.|+|+|++ |.+|..++.... ...++...+..|+.||+.||.|||... +|||-||||+||||
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 339999999 678888776544 456999999999999999999999876 59999999999999
No 396
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=3.2e-27 Score=245.85 Aligned_cols=253 Identities=23% Similarity=0.334 Sum_probs=199.3
Q ss_pred CccceeeccCCcEEEEEEEECC-------eEEEEEEEccC-CchhhHHHHHHHHHHHhcCCCceeeecccccCC---ceE
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH-------TFAAVKVLQSK-GNIQNKQFLQELEVLSKIRHPHLLLLLGACPDH---GCL 473 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~-------~~vAvK~l~~~-~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~---~~L 473 (757)
++....+-+|.||.||.|.|.. ..|-||.++.. +..+...|++|--.+..+.|||+..+.|.+.+. .+.
T Consensus 286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V 365 (563)
T KOG1024|consen 286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV 365 (563)
T ss_pred eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence 3444567899999999997642 24555655433 344566789999999999999999999998654 378
Q ss_pred EEEecCCCCHHHHHhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecC
Q 004388 474 VYEYMENGSLEDRLYR-----KNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGL 548 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~-----~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGl 548 (757)
.|.++.-|+|..+|.. ......++-.+...++.|++.|+.|||+++ |||.||-..|.+||+...+||+|=.+
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsaL 442 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSAL 442 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccchh
Confidence 8999999999999972 223334666677889999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhchhhHHHHh
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAIDEDNLAEIL 627 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~l~~~l 627 (757)
++.+-+.+-. +-..+......||+||.+.+..|+.++|||||||+||||+| |+.|+.-.+..+. ..-+.
T Consensus 443 SRDLFP~DYh----cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm------~~ylk 512 (563)
T KOG1024|consen 443 SRDLFPGDYH----CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM------EHYLK 512 (563)
T ss_pred ccccCccccc----ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH------HHHHh
Confidence 9876543311 11233455778999999999999999999999999999997 8899865444332 12345
Q ss_pred hhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHH
Q 004388 628 DAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERL 671 (757)
Q Consensus 628 d~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l 671 (757)
|......|.+++.+|..++..||...|++||++.+ +..-|...
T Consensus 513 dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q-lv~cLseF 555 (563)
T KOG1024|consen 513 DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ-LVICLSEF 555 (563)
T ss_pred ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH-HHHHHHHH
Confidence 56666789999999999999999999999999984 55555443
No 397
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=1.3e-27 Score=256.15 Aligned_cols=197 Identities=23% Similarity=0.291 Sum_probs=166.1
Q ss_pred HhhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcC------CCceeeecccc--cC
Q 004388 400 SATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIR------HPHLLLLLGAC--PD 469 (757)
Q Consensus 400 ~at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~------Hpniv~l~g~~--~~ 469 (757)
.....|......|+|-|++|.+|.+. +..||||++..... ..+.=+.|++||++|+ --|+++|+..| ..
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 34456777777899999999999875 55999999986532 3344568999999994 35788888877 45
Q ss_pred CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecC
Q 004388 470 HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGL 548 (757)
Q Consensus 470 ~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGl 548 (757)
+.|||+|-+. .+|.++|.+.+..-.|....+..++.|+..||..|-.++ |+|.||||+|||++.+ ..+||||||.
T Consensus 508 HLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 508 HLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred eeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcc
Confidence 6799999985 699999999888888999999999999999999999988 9999999999999875 6789999999
Q ss_pred ccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCcc
Q 004388 549 STMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 549 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~ 609 (757)
|....... . +...-+..|.|||++.+-.|+...|+||+||+||||.||+..|.
T Consensus 584 A~~~~ene---i-----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp 636 (752)
T KOG0670|consen 584 ASFASENE---I-----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP 636 (752)
T ss_pred cccccccc---c-----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence 98776543 1 22345678999999999999999999999999999999998775
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=6.7e-28 Score=265.29 Aligned_cols=249 Identities=26% Similarity=0.348 Sum_probs=200.8
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeeccccc--CCceEEEEe
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACP--DHGCLVYEY 477 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~--~~~~LV~Ey 477 (757)
..+|....++|.|.||.|||+++. +...|||+++........-+++|+-+++..+|||||.++|.+. +...++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 346778889999999999999986 4589999998887777777889999999999999999999984 556899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCC
Q 004388 478 MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 478 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~ 557 (757)
|.||+|.|..+- +.+++..+...+.++.+.||+|||+.+ -+|||||-.|||+++.|.+|++|||.+..+..
T Consensus 94 cgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita--- 164 (829)
T KOG0576|consen 94 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA--- 164 (829)
T ss_pred cCCCcccceeee---cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh---
Confidence 999999997654 346888888899999999999999988 79999999999999999999999999876543
Q ss_pred CccccccccCCcccccCCCcccc---ccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCC
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQ---RTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDW 634 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~ 634 (757)
+..+...+.||++|||||+. ..+.|...+|||++|++..|+---++|....|.....+-- -....++.....
T Consensus 165 ---ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm--TkS~~qpp~lkD 239 (829)
T KOG0576|consen 165 ---TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM--TKSGFQPPTLKD 239 (829)
T ss_pred ---hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh--hccCCCCCcccC
Confidence 33455778999999999954 5678999999999999999999888887655544321100 000011111112
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 635 PIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 635 p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
+......|.+++..|+..+|++||+....+
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 234577899999999999999999987543
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=4.8e-26 Score=231.49 Aligned_cols=196 Identities=31% Similarity=0.487 Sum_probs=167.1
Q ss_pred CccceeeccCCcEEEEEEEECC--eEEEEEEEccCCch-hhHHHHHHHHHHHhcCCCceeeecccccC--CceEEEEecC
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNI-QNKQFLQELEVLSKIRHPHLLLLLGACPD--HGCLVYEYME 479 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~-~~~~f~~Ev~il~~l~Hpniv~l~g~~~~--~~~LV~Ey~~ 479 (757)
|.....||.|++|.||+|...+ ..+++|.+...... ....+.+|++.+.+++|+|++++++++.. ..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4556789999999999999864 78999999876544 56788999999999999999999999864 4589999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFV 559 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~ 559 (757)
+++|.+++..... .+++.....++.+++.+|.|||..+ ++|+||+|.||+++.++.++|+|||++.........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~- 154 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA- 154 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-
Confidence 9999998875432 1788999999999999999999987 999999999999999999999999999877643200
Q ss_pred cccccccCCcccccCCCcccc-ccCCCCCcchhhhHHHHHHHHHhCCCCccc
Q 004388 560 STTYKNTGPVGTLCYIDPEYQ-RTGLISPKSDVYAYGMVILQLLTAKPAIAI 610 (757)
Q Consensus 560 ~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~ksDvwSlGvil~elltG~~Pf~~ 610 (757)
......++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 155 ----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11334678899999988 666788899999999999999999999954
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=9e-27 Score=252.61 Aligned_cols=193 Identities=24% Similarity=0.308 Sum_probs=162.2
Q ss_pred cCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchh--------hHHHHHHHHHHHhcC---CCceeeecccccC
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQ--------NKQFLQELEVLSKIR---HPHLLLLLGACPD 469 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~--------~~~f~~Ev~il~~l~---Hpniv~l~g~~~~ 469 (757)
.+|.....+|.|+||.|+++.++. ..|+||.+.+..... ....-.||.||..++ |+||++++++|.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 357888899999999999999864 478899876543211 112346999999997 9999999999987
Q ss_pred Cc--eEEEEec-CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeee
Q 004388 470 HG--CLVYEYM-ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDV 546 (757)
Q Consensus 470 ~~--~LV~Ey~-~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DF 546 (757)
.. ||+||-- +|.+|.|++..+. .+++.+..-|+.||+.|+++||+.+ |||||||-+|+.++.+|.+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeec
Confidence 76 6788763 5568899886554 4889999999999999999999988 999999999999999999999999
Q ss_pred cCccccCCCCCCccccccccCCcccccCCCccccccCCC-CCcchhhhHHHHHHHHHhCCCCcc
Q 004388 547 GLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLI-SPKSDVYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 547 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDvwSlGvil~elltG~~Pf~ 609 (757)
|.|.+...++ ...++||..|.|||++.+.+| +..-|||++||+||.++....||.
T Consensus 715 gsaa~~ksgp--------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGP--------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCC--------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998766543 245689999999999988765 577899999999999999999984
No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=3.8e-26 Score=233.58 Aligned_cols=243 Identities=20% Similarity=0.239 Sum_probs=182.4
Q ss_pred cCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCC--chhhHHHHHHHHHHHhcCCCceeeecccccCC--------
Q 004388 403 LSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKG--NIQNKQFLQELEVLSKIRHPHLLLLLGACPDH-------- 470 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~-------- 470 (757)
..|.....+|.|.- .|.-+.+ .+.+||+|.+.... .....+..+|..++..+.|+|++.++.+|...
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 34555667888877 5555543 46799999865431 22345567899999999999999999998432
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.|+|||||. ++|...+.. .++..+...|+.|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|+
T Consensus 96 ~y~v~e~m~-~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILM-----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhhh-hHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence 289999996 688887763 2556678899999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhch--------hh
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDE--------DN 622 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~--------~~ 622 (757)
..... +.++..+.|..|.|||++.+..|...+||||+|||+.||++|+.-|............ ..
T Consensus 167 ~e~~~-------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 167 TEDTD-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred ccCcc-------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 64432 4567779999999999988888999999999999999999999877643332221110 00
Q ss_pred HHHHhh-------------------hhcC--CCCh------hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 623 LAEILD-------------------AQAG--DWPI------KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 623 l~~~ld-------------------~~~~--~~p~------~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.+-+. ...+ .|+. .....+.+|+.+||-.+|++|-+..+
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~d 306 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDD 306 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHH
Confidence 000000 0001 1221 23556789999999999999999875
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=2.6e-25 Score=269.47 Aligned_cols=197 Identities=16% Similarity=0.175 Sum_probs=136.6
Q ss_pred hcCC-Cceeeeccccc-------C--CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCE
Q 004388 454 KIRH-PHLLLLLGACP-------D--HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPI 523 (757)
Q Consensus 454 ~l~H-pniv~l~g~~~-------~--~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~i 523 (757)
.++| +||+.++++|. + ..++++||+ +++|.++|... ..++++..+..|+.||+.||.|||+.+ |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---I 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQG---I 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 3456 58888888771 1 124678887 56999999643 245899999999999999999999988 9
Q ss_pred EEcCCCCCCeeecCC-------------------CceEEeeecCccccCCCCCC----------ccccccccCCcccccC
Q 004388 524 IHRDMKPGNILLDHN-------------------LVSKIGDVGLSTMLNSDPSF----------VSTTYKNTGPVGTLCY 574 (757)
Q Consensus 524 vHrDLKp~NILld~~-------------------~~~KL~DFGla~~~~~~~~~----------~~~~~~~~~~~gt~~Y 574 (757)
+||||||+||||+.. +.+||+|||+++........ ...........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999654 45556666665532210000 0000111234689999
Q ss_pred CCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccC
Q 004388 575 IDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRR 654 (757)
Q Consensus 575 ~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p 654 (757)
||||++.+..++.++|||||||+||||++|.+|+....... ..+..................++.+||+.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P 253 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTM--------SSLRHRVLPPQILLNWPKEASFCLWLLHPEP 253 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHH--------HHHHHhhcChhhhhcCHHHHHHHHHhCCCCh
Confidence 99999998999999999999999999999999875221111 1110001111111223456788999999999
Q ss_pred CCCCccchhh
Q 004388 655 KDRPDLKNQV 664 (757)
Q Consensus 655 ~~RPs~~~~v 664 (757)
.+||++.+++
T Consensus 254 ~~Rps~~eil 263 (793)
T PLN00181 254 SCRPSMSELL 263 (793)
T ss_pred hhCcChHHHh
Confidence 9999998643
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-25 Score=223.50 Aligned_cols=233 Identities=21% Similarity=0.298 Sum_probs=171.7
Q ss_pred cCCccceeeccCCcEEEEEEEECC--eEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceeeeccc-ccCCc--eEEEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLLLLGA-CPDHG--CLVYE 476 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~l~g~-~~~~~--~LV~E 476 (757)
+.|.+.+.||+|.||.+-++.+++ +.+++|...... ....+|.+|...--.| .|.||+.-|.. |+... ++++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 357888899999999999999975 588999876543 3457799998876666 48999988765 44333 57999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee-c-CCCceEEeeecCccccCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL-D-HNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl-d-~~~~~KL~DFGla~~~~~ 554 (757)
|++.|+|..-+.. ..+.+....+++.|+++||.|+|+.+ +||||||.+|||| + +...+||||||+.+..+.
T Consensus 103 ~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred cCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 9999999887644 23777788899999999999999988 9999999999999 3 346899999999886553
Q ss_pred CCCCccccccccCCcccccCCCccccccC-----CCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHh--
Q 004388 555 DPSFVSTTYKNTGPVGTLCYIDPEYQRTG-----LISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEIL-- 627 (757)
Q Consensus 555 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~l-- 627 (757)
... ...-+..|.+||.+... ...+.+|+|.||||++.+|||++||.... +......+.+
T Consensus 176 tV~---------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~-----~~d~~Y~~~~~w 241 (378)
T KOG1345|consen 176 TVK---------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS-----IMDKPYWEWEQW 241 (378)
T ss_pred eeh---------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh-----ccCchHHHHHHH
Confidence 321 22346779999965432 35788999999999999999999996221 1112122111
Q ss_pred -hhhcCCCCh---hHHHHHHHHHHHHhhccCCCC
Q 004388 628 -DAQAGDWPI---KETKELAALGLSCAELRRKDR 657 (757)
Q Consensus 628 -d~~~~~~p~---~~~~~l~~Li~~Cl~~~p~~R 657 (757)
.......|. ..++.+..+..+-+..++++|
T Consensus 242 ~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 242 LKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred hcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 111111121 235667777788888888888
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=4.9e-25 Score=233.28 Aligned_cols=200 Identities=24% Similarity=0.365 Sum_probs=160.0
Q ss_pred HHhhcCCccceeeccCCcEEEEEEEECC-----eEEEEEEEccCCchhhHHHHHHHHHHHhcC-CCceeeeccccc--CC
Q 004388 399 ESATLSFSENLRIGMGGYGTVYKGTFHH-----TFAAVKVLQSKGNIQNKQFLQELEVLSKIR-HPHLLLLLGACP--DH 470 (757)
Q Consensus 399 ~~at~~f~~~~~IG~G~~G~Vyk~~~~~-----~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~--~~ 470 (757)
....+.|....+||.|.|++||++++.. ..||+|.+.... ....+.+|+++|..+. +-||+++.+++. +.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3445568888999999999999997643 489999876543 4556889999999995 999999999985 45
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-CCceEEeeecCc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-NLVSKIGDVGLS 549 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-~~~~KL~DFGla 549 (757)
.++|+||++.....+++.. ++......+++.++.||.++|..| ||||||||+|+|.+. -+.-.|+|||||
T Consensus 110 v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhH
Confidence 5899999999999887743 566788899999999999999998 999999999999975 467789999999
Q ss_pred cccCCCC------C-------C---------------ccc----------cccccCCcccccCCCccccc-cCCCCCcch
Q 004388 550 TMLNSDP------S-------F---------------VST----------TYKNTGPVGTLCYIDPEYQR-TGLISPKSD 590 (757)
Q Consensus 550 ~~~~~~~------~-------~---------------~~~----------~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksD 590 (757)
....... . . ... .......+||++|.|||++. .+..++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 7321100 0 0 000 01112348999999999764 456889999
Q ss_pred hhhHHHHHHHHHhCCCCcc
Q 004388 591 VYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 591 vwSlGvil~elltG~~Pf~ 609 (757)
|||.|||++-+++++.||.
T Consensus 261 iws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred eeeccceeehhhccccccc
Confidence 9999999999999999996
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=6.8e-24 Score=209.08 Aligned_cols=159 Identities=21% Similarity=0.248 Sum_probs=122.7
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|+|.+++...+ .++++..+..|+.||+.||.|||+.+ ||+|||++.++.+|+ ||++......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc-----
Confidence 78999987543 35999999999999999999999965 999999999999999 9999875432
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC------C
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD------W 634 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~------~ 634 (757)
...||+.|+|||++.+..++.++|||||||++|||+||++||........ .+..++...... .
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 131 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-----ILEILLNGMPADDPRDRSN 131 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-----HHHHHHHHhccCCcccccc
Confidence 12689999999999999999999999999999999999999964332211 111122111111 1
Q ss_pred ChhHHH--HHHHHHHHHhhccCCCCCccchhhhhHHH
Q 004388 635 PIKETK--ELAALGLSCAELRRKDRPDLKNQVLPVLE 669 (757)
Q Consensus 635 p~~~~~--~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~ 669 (757)
+..... .+.+++.+||..+|.+||++.+ ++..+.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~-ll~~~~ 167 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANH-YLAHCR 167 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHH-HHHHHH
Confidence 122233 6999999999999999999984 544443
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=8.6e-23 Score=221.83 Aligned_cols=258 Identities=22% Similarity=0.233 Sum_probs=189.9
Q ss_pred CCccceeeccCCcEEEEEEEECCe---EEEEEEEccCCchhhHHHHHHHHHHHhcCC----Cceeeeccccc-CC--ceE
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHT---FAAVKVLQSKGNIQNKQFLQELEVLSKIRH----PHLLLLLGACP-DH--GCL 473 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~---~vAvK~l~~~~~~~~~~f~~Ev~il~~l~H----pniv~l~g~~~-~~--~~L 473 (757)
.|....+||+|+||.||+|..... .+|+|+...........+..|+.++..+.. +++..+++... .. .++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 789999999999999999998654 689998776543333367789999998863 57777777763 33 489
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-----CceEEeeecC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-----LVSKIGDVGL 548 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-----~~~KL~DFGl 548 (757)
||+.+ |.+|.++..... ...++..+.++|+.|++.+|.+||+.| ++||||||+|++++.. ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 789999775554 456999999999999999999999988 9999999999999865 4689999999
Q ss_pred cc--ccCCCCCCcccccc--ccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHH
Q 004388 549 ST--MLNSDPSFVSTTYK--NTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLA 624 (757)
Q Consensus 549 a~--~~~~~~~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~ 624 (757)
++ .+...........+ .....||..|+++....+...+.+.|+||++.++.+|+.|..||........ ...+.
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~~ 250 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL---KSKFE 250 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch---HHHHH
Confidence 98 33222211101111 2346799999999999999999999999999999999999999953332111 11111
Q ss_pred HHhhhhcCC-CChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHH
Q 004388 625 EILDAQAGD-WPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLER 670 (757)
Q Consensus 625 ~~ld~~~~~-~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~ 670 (757)
......... .....+..+..+...+-..+..++|+.. .+...|..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~-~~~~~l~~ 296 (322)
T KOG1164|consen 251 KDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYE-KLAELLKD 296 (322)
T ss_pred HHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHH-HHHHHHHH
Confidence 111111111 1223456777777777779999999997 34444433
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.5e-23 Score=226.95 Aligned_cols=171 Identities=20% Similarity=0.202 Sum_probs=130.4
Q ss_pred HHHHhhcCCccceeeccCCcEEEEEEEEC---CeEEEEEEEccCC-----chhhHHHHHHHHHHHhcCCCceee-ecccc
Q 004388 397 EIESATLSFSENLRIGMGGYGTVYKGTFH---HTFAAVKVLQSKG-----NIQNKQFLQELEVLSKIRHPHLLL-LLGAC 467 (757)
Q Consensus 397 ei~~at~~f~~~~~IG~G~~G~Vyk~~~~---~~~vAvK~l~~~~-----~~~~~~f~~Ev~il~~l~Hpniv~-l~g~~ 467 (757)
.+.....+|.....||+|+||.||+|.+. ++.+|||++.... ......|.+|+++|.+++|+|++. ++++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 34455667999999999999999999874 5678999875331 223456899999999999999985 5442
Q ss_pred cCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCC-CCCCeeecCCCceEEeee
Q 004388 468 PDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDM-KPGNILLDHNLVSKIGDV 546 (757)
Q Consensus 468 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDL-Kp~NILld~~~~~KL~DF 546 (757)
+..+|||||++|++|.. +. . .. ...++.+++.||.|||+.+ |+|||| ||+|||++.++.+||+||
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~--~----~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR--P----HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC--c----cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEEC
Confidence 45699999999999963 21 1 11 1467889999999999988 999999 999999999999999999
Q ss_pred cCccccCCCCCCccc-ccc-ccCCcccccCCCcccccc
Q 004388 547 GLSTMLNSDPSFVST-TYK-NTGPVGTLCYIDPEYQRT 582 (757)
Q Consensus 547 Gla~~~~~~~~~~~~-~~~-~~~~~gt~~Y~aPE~~~~ 582 (757)
|+|+.+......... .+. -+...+++.|++||++..
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 999987643211110 011 145688999999998754
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=1.1e-21 Score=207.25 Aligned_cols=255 Identities=30% Similarity=0.435 Sum_probs=193.2
Q ss_pred CccceeeccCCcEEEEEEEECCeEEEEEEEccCCch---hhHHHHHHHHHHHhcCCC-ceeeecccccCCc--eEEEEec
Q 004388 405 FSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNI---QNKQFLQELEVLSKIRHP-HLLLLLGACPDHG--CLVYEYM 478 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~Hp-niv~l~g~~~~~~--~LV~Ey~ 478 (757)
|.....||.|+||.||++... ..+++|.+...... ....|.+|+.++..+.|+ +++.+++.+.... +++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 556678999999999999888 77899988765443 367799999999999988 7999999985554 7999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC-ceEEeeecCccccCCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL-VSKIGDVGLSTMLNSDPS 557 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~-~~KL~DFGla~~~~~~~~ 557 (757)
.+++|.+++........++......++.|++.+|.|+|..+ ++||||||+|||++..+ .++++|||+++.+.....
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 99999966644321125788899999999999999999988 99999999999999988 799999999986554332
Q ss_pred CccccccccCCcccccCCCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCC-
Q 004388 558 FVSTTYKNTGPVGTLCYIDPEYQRT---GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGD- 633 (757)
Q Consensus 558 ~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~- 633 (757)
............||..|++||.+.. ..++...|+||+|++++++++|..||...... .........+......
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTPS 234 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCcc
Confidence 1110012356689999999998877 57889999999999999999999997644321 0001111111111111
Q ss_pred --CChh------HHHHHHHHHHHHhhccCCCCCccchhhhh
Q 004388 634 --WPIK------ETKELAALGLSCAELRRKDRPDLKNQVLP 666 (757)
Q Consensus 634 --~p~~------~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~ 666 (757)
.+.. ....+.+++..|+..+|..|.+....+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111 13578999999999999999998754443
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=5.6e-23 Score=205.34 Aligned_cols=262 Identities=21% Similarity=0.397 Sum_probs=205.4
Q ss_pred hccccccccCCCHHHHHHhhcCCccceeeccCCcEEEEEEEECCeEEEEEEEccCCc--hhhHHHHHHHHHHHhcCCCce
Q 004388 383 LNGTFQRYRNLTWEEIESATLSFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGN--IQNKQFLQELEVLSKIRHPHL 460 (757)
Q Consensus 383 ~~~~~~~~~~~~~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~--~~~~~f~~Ev~il~~l~Hpni 460 (757)
...+..+|..++..++...| +|.+...|..|+|++.+..+++|++..... ....+|..|.-.|+-+.||||
T Consensus 177 rdatlsr~~gid~~~lnl~t-------kl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpni 249 (448)
T KOG0195|consen 177 RDATLSRYTGIDVSSLNLIT-------KLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNI 249 (448)
T ss_pred cccccccccCcchhhhhhhh-------hhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCch
Confidence 44556677777776666555 588999999999999999999999876532 234679999999999999999
Q ss_pred eeecccccC--CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC
Q 004388 461 LLLLGACPD--HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN 538 (757)
Q Consensus 461 v~l~g~~~~--~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~ 538 (757)
+.++|+|.. +..++..||+.|||...|+.... -.++-.+..+++.+|++|++|||+..| -|..--|....+++|++
T Consensus 250 lpvlgacnsppnlv~isq~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmided 327 (448)
T KOG0195|consen 250 LPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDED 327 (448)
T ss_pred hhhhhhccCCCCceEeeeeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecch
Confidence 999999965 44788999999999999986543 245666888999999999999999984 23444699999999999
Q ss_pred CceEEe--eecCccccCCCCCCccccccccCCcccccCCCccccccCCC---CCcchhhhHHHHHHHHHhCCCCccccch
Q 004388 539 LVSKIG--DVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLI---SPKSDVYAYGMVILQLLTAKPAIAITHK 613 (757)
Q Consensus 539 ~~~KL~--DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~---s~ksDvwSlGvil~elltG~~Pf~~~~~ 613 (757)
.+++|+ |--++ +...+..-.|.||+||.++..+- -..+|+|||+++||||.|...||..-..
T Consensus 328 ltarismad~kfs-------------fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp 394 (448)
T KOG0195|consen 328 LTARISMADTKFS-------------FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP 394 (448)
T ss_pred hhhheecccceee-------------eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc
Confidence 988874 32222 12233456899999998876543 3579999999999999999999975555
Q ss_pred hhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhhhhHHHHHH
Q 004388 614 VETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQVLPVLERLK 672 (757)
Q Consensus 614 ~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~vl~~L~~l~ 672 (757)
.+... .-.+.......|+..+..+.+|+.-|+..||.+||.+. .|++.|+++.
T Consensus 395 mecgm-----kialeglrv~ippgis~hm~klm~icmnedpgkrpkfd-mivpilekm~ 447 (448)
T KOG0195|consen 395 MECGM-----KIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD-MIVPILEKMI 447 (448)
T ss_pred hhhhh-----hhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcc-eehhhHHHhc
Confidence 44432 22344445567888899999999999999999999997 7889998864
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=2.2e-21 Score=191.45 Aligned_cols=249 Identities=20% Similarity=0.216 Sum_probs=189.2
Q ss_pred hcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCC-CceeeecccccC--CceEEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRH-PHLLLLLGACPD--HGCLVYE 476 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~H-pniv~l~g~~~~--~~~LV~E 476 (757)
..+|...++||.|+||.+|.|.. .+..||||+-..... ..++..|..+...|+| +.|..+..+..+ ...|||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 34688999999999999999986 467999999765443 3457788888888875 344444444444 3479999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC---CceEEeeecCccccC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN---LVSKIGDVGLSTMLN 553 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~---~~~KL~DFGla~~~~ 553 (757)
.+ |.||++++.-... .++..+++.++-|++.-++|+|..+ +|||||||+|+|.+-+ ..+.|+|||||+.+-
T Consensus 92 LL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred cc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence 99 7899998764433 3888899999999999999999988 9999999999999755 457899999999877
Q ss_pred CCCCCcccccc-ccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcC
Q 004388 554 SDPSFVSTTYK-NTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAG 632 (757)
Q Consensus 554 ~~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~ 632 (757)
+........++ .....||..|.+-..+.+...+.+.|+-|+|.+|.++.-|..||....... .......+......
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t---k~QKyEkI~EkK~s 242 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT---KKQKYEKISEKKMS 242 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh---HHHHHHHHHHhhcC
Confidence 65544444443 356789999999888877788899999999999999999999996433222 22233333333322
Q ss_pred CCC----hhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 633 DWP----IKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 633 ~~p----~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
..+ ...+.++.-.+.-|-.+.-.+-|+..
T Consensus 243 ~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 243 TPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred CCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 211 12356788888999999999999975
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=7.3e-21 Score=195.46 Aligned_cols=249 Identities=18% Similarity=0.215 Sum_probs=188.9
Q ss_pred hcCCccceeeccCCcEEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcC-CCceeeecccccC--CceEEEE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIR-HPHLLLLLGACPD--HGCLVYE 476 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~--~~~LV~E 476 (757)
..+|...++||+|.||.++.|.. ++.+||||.-...+. .-++.-|....+.|. -++|...|-+-++ +..||+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 45799999999999999999975 688999998654432 234566777777774 5777666555444 4579999
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-----CceEEeeecCccc
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-----LVSKIGDVGLSTM 551 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-----~~~KL~DFGla~~ 551 (757)
++ |.||+|++.-.+. .++..++..||.|++.-+.|+|.+. +|+|||||+|+||... ..+.|+|||+|+.
T Consensus 105 LL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 99 7899997765554 4899999999999999999999988 9999999999999754 4689999999999
Q ss_pred cCCCCCCccccccc-cCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhh
Q 004388 552 LNSDPSFVSTTYKN-TGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQ 630 (757)
Q Consensus 552 ~~~~~~~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~ 630 (757)
+-+........|+. ....||..||+=.-..+...+.+.|+-|||-++++.|-|..||..... .........+=+..
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA---~tnK~kYeKIGe~K 255 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA---DTNKEKYEKIGETK 255 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC---cchHHHHHHhcccc
Confidence 88766555555543 457899999999988888899999999999999999999999963211 11112222222221
Q ss_pred cCCC----ChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 631 AGDW----PIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 631 ~~~~----p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.... ....+.+++..+.-.-.++-.+-|+..
T Consensus 256 r~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYd 290 (449)
T KOG1165|consen 256 RSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYD 290 (449)
T ss_pred ccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHH
Confidence 1111 112456778888777788888999975
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=2.4e-20 Score=186.93 Aligned_cols=138 Identities=17% Similarity=0.204 Sum_probs=106.2
Q ss_pred eeeccCCcEEEEEEEEC-CeEEEEEEEccCCch--h-------hHHH-----------------HHHHHHHHhcCCCcee
Q 004388 409 LRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNI--Q-------NKQF-----------------LQELEVLSKIRHPHLL 461 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~--~-------~~~f-----------------~~Ev~il~~l~Hpniv 461 (757)
..||+|+||.||+|... +..||||+++..... . ...| ..|+.+|.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 46999999999999874 779999998754211 0 1122 3499999999877663
Q ss_pred eecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCEEEcCCCCCCeeecCCCc
Q 004388 462 LLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFL-HNTKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 462 ~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~L-H~~~~~~ivHrDLKp~NILld~~~~ 540 (757)
..........+|||||++|++|...+... .++++.....++.|++.+|.|| |+.+ |+||||||+|||++ ++.
T Consensus 83 ~p~~~~~~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 83 CPEPILLKSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCcEEEecCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CCc
Confidence 32222233448999999988776543322 3588889999999999999999 6877 99999999999998 578
Q ss_pred eEEeeecCccccC
Q 004388 541 SKIGDVGLSTMLN 553 (757)
Q Consensus 541 ~KL~DFGla~~~~ 553 (757)
++|+|||+|....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999997643
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=1.4e-20 Score=191.78 Aligned_cols=170 Identities=14% Similarity=0.088 Sum_probs=131.9
Q ss_pred hhcCCccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhH---H------HHHHHHHHHhcCCCceeeeccccc---
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNK---Q------FLQELEVLSKIRHPHLLLLLGACP--- 468 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~---~------f~~Ev~il~~l~Hpniv~l~g~~~--- 468 (757)
..++|...+.||.|+||.||+...++..+|||++......... . |.+|+..+.++.||+|.....++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 3567899999999999999998777779999999765432222 2 578999999999999998877643
Q ss_pred -------CCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCce
Q 004388 469 -------DHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVS 541 (757)
Q Consensus 469 -------~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~ 541 (757)
...+|||||++|.+|.+... ++. ....+++.+|..||..+ ++|||+||+||+++.+| +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-E
Confidence 13489999999999988631 222 34569999999999988 99999999999999988 9
Q ss_pred EEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHh
Q 004388 542 KIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLT 603 (757)
Q Consensus 542 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~ellt 603 (757)
+|+|||........... .-+.....|+.++|+||||++|..+..
T Consensus 174 ~liDfg~~~~~~e~~a~------------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK------------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEECCCcccccchhhH------------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 99999988755322110 013334456679999999999886654
No 414
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=4.9e-20 Score=184.20 Aligned_cols=188 Identities=16% Similarity=0.088 Sum_probs=140.3
Q ss_pred ccceeeccCCcEEEEEEEECCeEEEEEEEccCCch----hhHHHHHHHHHHHhcC-CCceeeecccccCCceEEEEecCC
Q 004388 406 SENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNI----QNKQFLQELEVLSKIR-HPHLLLLLGACPDHGCLVYEYMEN 480 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~----~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~~LV~Ey~~~ 480 (757)
.....||+|+||+||.+...+..++.+.+...... ....|.+|+++|.+|. |++++.++++ +..+++|||+.|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence 45668999999999998888888887777654331 1225789999999995 5788888886 446899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCC-CCCCeeecCCCceEEeeecCccccCCCCCC-
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDM-KPGNILLDHNLVSKIGDVGLSTMLNSDPSF- 558 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDL-Kp~NILld~~~~~KL~DFGla~~~~~~~~~- 558 (757)
.+|...+.. ....++.+++.+|.+||..+ |+|||| ||+|||++.++.++|+|||+|.........
T Consensus 83 ~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 83 AAMYQRPPR----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ccHHhhhhh----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 998654311 11357789999999999988 999999 799999999999999999999865533210
Q ss_pred ---c----cccccccCCcccccCCCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCcc
Q 004388 559 ---V----STTYKNTGPVGTLCYIDPEYQRT--GLISPKSDVYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 559 ---~----~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDvwSlGvil~elltG~~Pf~ 609 (757)
. ....+ .-...++.|++|+...- ..--...++++-|+-+|.++||..++.
T Consensus 150 r~L~~rDl~~llk-~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 150 RLLAREDLRHLLK-HKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHH-HHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 0 00000 11246888999984322 222256799999999999999997764
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=1.1e-20 Score=218.34 Aligned_cols=244 Identities=23% Similarity=0.326 Sum_probs=178.3
Q ss_pred CCccceeeccCCcEEEEEEEECCeEEEEEEEccCC-chhhHHHHHHHHH--HHhcCCCceeeecccccC--CceEEEEec
Q 004388 404 SFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKG-NIQNKQFLQELEV--LSKIRHPHLLLLLGACPD--HGCLVYEYM 478 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~-~~~~~~f~~Ev~i--l~~l~Hpniv~l~g~~~~--~~~LV~Ey~ 478 (757)
+|.....||.+.|=.|.+|.++...|+||++-... ......|.++++- ..-++|||++++.-+-.. ..|||-+|+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv 103 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV 103 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence 45566779999999999999998889999986654 4445555554443 344589999998766432 348899999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc--cCCCC
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM--LNSDP 556 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~--~~~~~ 556 (757)
.+ +|.|+|.-+ +-+...+...|+.|++.||.-+|..+ |+|||||.+||||+.-..+.|+||..-+. ++.++
T Consensus 104 kh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 104 KH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred hh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 64 899988532 34667778889999999999999998 99999999999999999999999986543 22222
Q ss_pred CCccccccccCCcccccCCCccccccC-----------CCCCcchhhhHHHHHHHHHh-CCCCccccchhhhhhc-hhhH
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTG-----------LISPKSDVYAYGMVILQLLT-AKPAIAITHKVETAID-EDNL 623 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~s~ksDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~-~~~l 623 (757)
. ....|-..+...-.+|+|||.+..+ .+++++||||+||+++||++ |+|||.+.+....... ....
T Consensus 177 P-adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~ 255 (1431)
T KOG1240|consen 177 P-ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDP 255 (1431)
T ss_pred c-ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCH
Confidence 1 1222222333456789999966431 27889999999999999997 7999986655443222 1111
Q ss_pred HHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 624 AEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 624 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
..++.. . +...+.+|++.|++.+|..|-++.+
T Consensus 256 e~~Le~-I------ed~~~Rnlil~Mi~rdPs~RlSAed 287 (1431)
T KOG1240|consen 256 EQLLEK-I------EDVSLRNLILSMIQRDPSKRLSAED 287 (1431)
T ss_pred HHHHHh-C------cCccHHHHHHHHHccCchhccCHHH
Confidence 222211 1 2346899999999999999999875
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=1.4e-19 Score=181.65 Aligned_cols=139 Identities=18% Similarity=0.134 Sum_probs=109.3
Q ss_pred eeeccCCcEEEEEEEEC-CeEEEEEEEccCCchh--------------------------hHHHHHHHHHHHhcCCCcee
Q 004388 409 LRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQ--------------------------NKQFLQELEVLSKIRHPHLL 461 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~--------------------------~~~f~~Ev~il~~l~Hpniv 461 (757)
..||+|+||.||+|.+. ++.||||+++...... ...+..|...+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 57999999999999875 7899999988652110 12235789999999998874
Q ss_pred eecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCCc
Q 004388 462 LLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 462 ~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~~ 540 (757)
....+.....+|||||++|+++....... ..++......++.+++.+|.+||+ .+ |+||||||+|||++ ++.
T Consensus 83 ~p~~~~~~~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~ 155 (190)
T cd05145 83 VPEPILLKKNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CceEEEecCCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCC
Confidence 43333334568999999988654432222 246777889999999999999999 87 99999999999999 899
Q ss_pred eEEeeecCccccCC
Q 004388 541 SKIGDVGLSTMLNS 554 (757)
Q Consensus 541 ~KL~DFGla~~~~~ 554 (757)
++|+|||++...+.
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999987654
No 417
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2e-20 Score=216.92 Aligned_cols=247 Identities=18% Similarity=0.252 Sum_probs=175.0
Q ss_pred cceeeccCCcEEEEEEEEC--CeEEEEEEEccC--Cchhh----HHHHHHHHHHHhcCCCceeeecccccCCc--eEEEE
Q 004388 407 ENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSK--GNIQN----KQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYE 476 (757)
Q Consensus 407 ~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~--~~~~~----~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~E 476 (757)
....+|.|.||.|+..... ...++.|..... ..... ..+..|+-+-..+.|||++..+..+.+.. .-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4567899999977765432 223333332210 11111 11556777778889999988877765433 33599
Q ss_pred ecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC
Q 004388 477 YMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP 556 (757)
Q Consensus 477 y~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~ 556 (757)
||++ +|..++...+ .+....+..++.|++.||.|||..| |.||||||+|+|+..+|.+||+|||.+..+.-..
T Consensus 402 ~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9998 9999887653 3666788899999999999999998 9999999999999999999999999997765332
Q ss_pred CCccccccccCCcccccCCCccccccCCCCC-cchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCC
Q 004388 557 SFVSTTYKNTGPVGTLCYIDPEYQRTGLISP-KSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWP 635 (757)
Q Consensus 557 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~-ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p 635 (757)
. .......+.+|+-.|+|||.+....|.+ ..||||.||+++.|++|+.||......+..........-.....+.++
T Consensus 475 e--~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~ 552 (601)
T KOG0590|consen 475 E--KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR 552 (601)
T ss_pred c--hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH
Confidence 2 1123446789999999999999888876 589999999999999999999755443332100000000000001111
Q ss_pred --hhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 636 --IKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 636 --~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
...+..-..++-++|+++|.+|-++.+
T Consensus 553 ~~~~lp~~~~~~~~~~l~~~P~~R~ti~~ 581 (601)
T KOG0590|consen 553 LLSLLPRETRIIIYRMLQLDPTKRITIEQ 581 (601)
T ss_pred HHHhchhhHHHHHHHHccCChhheecHHH
Confidence 134566788999999999999999885
No 418
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.6e-20 Score=208.42 Aligned_cols=222 Identities=25% Similarity=0.261 Sum_probs=177.5
Q ss_pred eccCCcEEEEEE-----EECCeEEEEEEEccCCchh--hHHHHHHHHHHHhcC-CCceeeecccccCCc--eEEEEecCC
Q 004388 411 IGMGGYGTVYKG-----TFHHTFAAVKVLQSKGNIQ--NKQFLQELEVLSKIR-HPHLLLLLGACPDHG--CLVYEYMEN 480 (757)
Q Consensus 411 IG~G~~G~Vyk~-----~~~~~~vAvK~l~~~~~~~--~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~--~LV~Ey~~~ 480 (757)
+|.|.||.|+++ .+.+..+|+|++....... ......|..++..++ ||.+|.+..++.... +++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 799999999974 3456688999887653221 114556888898887 999999998886544 899999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS 560 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~ 560 (757)
|.|...+..... +.......+..+++-+++++|..+ |+|||+|++||+++.+|++++.|||+++..-...
T Consensus 82 g~lft~l~~~~~---f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 82 GDLFTRLSKEVM---FDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred chhhhccccCCc---hHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 999887765443 555566677889999999999998 9999999999999999999999999998765432
Q ss_pred ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHH
Q 004388 561 TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETK 640 (757)
Q Consensus 561 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~ 640 (757)
..+||..|||||+.+ .....+|+||||++++||+||-.||.. +.+. .|-......|.....
T Consensus 152 ------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----------~~~~-~Il~~~~~~p~~l~~ 212 (612)
T KOG0603|consen 152 ------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----------DTMK-RILKAELEMPRELSA 212 (612)
T ss_pred ------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----------HHHH-HHhhhccCCchhhhH
Confidence 128999999999988 457899999999999999999999964 1222 222333456777888
Q ss_pred HHHHHHHHHhhccCCCCCccc
Q 004388 641 ELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 641 ~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.+..++..++..+|..|-...
T Consensus 213 ~a~~~~~~l~~r~p~nrLg~~ 233 (612)
T KOG0603|consen 213 EARSLFRQLFKRNPENRLGAG 233 (612)
T ss_pred HHHHHHHHHHhhCHHHHhccC
Confidence 899999999999999997664
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=2.1e-18 Score=175.07 Aligned_cols=135 Identities=16% Similarity=0.245 Sum_probs=104.7
Q ss_pred CccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhc-----CCCceeeecccccCC---ce---E
Q 004388 405 FSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKI-----RHPHLLLLLGACPDH---GC---L 473 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-----~Hpniv~l~g~~~~~---~~---L 473 (757)
......||+|+||.||..... ...+||++........+.+.+|+.+++.+ .||||++++|++.+. ++ +
T Consensus 4 L~~~~~LG~G~~~~Vy~hp~~-~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYAHPED-AQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cCCcceecCCCceEEEECCCC-cCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 345568999999999962222 23479988765444567799999999999 579999999999665 23 6
Q ss_pred EEEe--cCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCEEEcCCCCCCeeecC----CCceEEeee
Q 004388 474 VYEY--MENGSLEDRLYRKNNTPPIPWFERYRIAWEVASAL-AFLHNTKPKPIIHRDMKPGNILLDH----NLVSKIGDV 546 (757)
Q Consensus 474 V~Ey--~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL-~~LH~~~~~~ivHrDLKp~NILld~----~~~~KL~DF 546 (757)
|+|| +.+|+|.+++.+. .++.. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 8999 5579999999542 24443 35678888888 8999988 999999999999974 348999995
Q ss_pred cCc
Q 004388 547 GLS 549 (757)
Q Consensus 547 Gla 549 (757)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 444
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=1.2e-17 Score=175.31 Aligned_cols=229 Identities=19% Similarity=0.262 Sum_probs=144.8
Q ss_pred CccceeeccCCcEEEEEEEECC--eEEEEEEEccCCc---hhhHHHHHHHHHHHhcCC-----------Cc-----eeee
Q 004388 405 FSENLRIGMGGYGTVYKGTFHH--TFAAVKVLQSKGN---IQNKQFLQELEVLSKIRH-----------PH-----LLLL 463 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~~~---~~~~~f~~Ev~il~~l~H-----------pn-----iv~l 463 (757)
+.....||.|+|+.||.+++.. ..+|||++..... ...+++.+|.-....+.+ .. ++++
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3445679999999999999975 6999999765432 234556666544443322 11 1121
Q ss_pred ccc---c---c-------CCceEEEEecCCCCHHHHHh---hcCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEc
Q 004388 464 LGA---C---P-------DHGCLVYEYMENGSLEDRLY---RKNNT-PPIPWFERYRIAWEVASALAFLHNTKPKPIIHR 526 (757)
Q Consensus 464 ~g~---~---~-------~~~~LV~Ey~~~gsL~~~L~---~~~~~-~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHr 526 (757)
-+- + . -+.+++|+-+. ++|.+++. ..... ..+....++.+..|++..+++||..+ +||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEES
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEec
Confidence 110 0 1 12256787774 78888754 22211 22445566777789999999999998 9999
Q ss_pred CCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCcccccc--------CCCCCcchhhhHHHHH
Q 004388 527 DMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT--------GLISPKSDVYAYGMVI 598 (757)
Q Consensus 527 DLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~s~ksDvwSlGvil 598 (757)
||+|+|+|++.+|.++|+||+......... .....+..|.+||.... -.++.+.|.|+||+++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~---------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRY---------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEE---------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCcee---------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 999999999999999999998876543211 11244577999996533 2478899999999999
Q ss_pred HHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCC
Q 004388 599 LQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDR 657 (757)
Q Consensus 599 ~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~R 657 (757)
|.|++|..||+........ .. ...... +.+..+..||..+|+.+|.+|
T Consensus 241 y~lWC~~lPf~~~~~~~~~---~~-------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEADP---EW-------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGSTS---GG-------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCccccc---cc-------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999999999865322110 00 112233 678899999999999999987
No 421
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.74 E-value=6.6e-18 Score=187.82 Aligned_cols=201 Identities=24% Similarity=0.403 Sum_probs=150.6
Q ss_pred HHhcCCCceeeecccccCCc--eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCC
Q 004388 452 LSKIRHPHLLLLLGACPDHG--CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMK 529 (757)
Q Consensus 452 l~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLK 529 (757)
|+.+.|.|+.+|+|.+.+.. +.|.+||..|+|.|.+.... ..++|.-...++.+|+.||.|||... . ..|+.|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s~-i-~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNSP-I-GYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcCc-c-eeeeeec
Confidence 45689999999999996654 78999999999999997633 45889999999999999999999865 1 3999999
Q ss_pred CCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccC-------CCCCcchhhhHHHHHHHHH
Q 004388 530 PGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTG-------LISPKSDVYAYGMVILQLL 602 (757)
Q Consensus 530 p~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~ksDvwSlGvil~ell 602 (757)
+.|.++|..+.+||+|||+........... ......-...|.|||.+... ..+.+.||||||++++|++
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~----~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPE----AHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred cccceeeeeEEEEechhhhccccccccccc----ccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 999999999999999999988764311000 01122345679999987653 1477899999999999999
Q ss_pred hCCCCccccchhhhhhchhhHHHHhh-hhc---CC-CCh-hHHHHHHHHHHHHhhccCCCCCccch
Q 004388 603 TAKPAIAITHKVETAIDEDNLAEILD-AQA---GD-WPI-KETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 603 tG~~Pf~~~~~~~~~~~~~~l~~~ld-~~~---~~-~p~-~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
+.+.||......... .+.+..+.+ ... +. +.. ...+.+..++..||..+|.+||++..
T Consensus 153 ~r~~~~~~~~~~~~~--~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~ 216 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDP--DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQ 216 (484)
T ss_pred hccCccccccccCCh--HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHH
Confidence 999999865443332 122222222 111 11 112 33446999999999999999999873
No 422
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73 E-value=3.9e-18 Score=197.63 Aligned_cols=213 Identities=23% Similarity=0.270 Sum_probs=149.0
Q ss_pred hhcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCceEEEEec
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHGCLVYEYM 478 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~~LV~Ey~ 478 (757)
...+|...+.|..|+||.||.++++ .+.+|+|+- .... +.+- ||.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiN-kq~l-----ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKIN-KQNL-----ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhccc-ccch-----hhhc--cccccCCccee-----------------
Confidence 3567889999999999999999887 457888442 2111 1110 22223333333
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCC--
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDP-- 556 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~-- 556 (757)
|+-.+.+..-+ +++.. ++.+++|||+.+ |+|||+||+|.||..-|++|++|||+++...-..
T Consensus 136 --gDc~tllk~~g---~lPvd--------mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 --GDCATLLKNIG---PLPVD--------MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred --chhhhhcccCC---CCcch--------hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 45555453322 34432 378999999988 9999999999999999999999999987532111
Q ss_pred -------CCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 557 -------SFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 557 -------~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
...+..+.....+|||.|+|||++....|+..+|+|++|+|+||.+.|..||.....- .|...+-.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe-------elfg~vis 272 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-------ELFGQVIS 272 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH-------HHHhhhhh
Confidence 1122334456679999999999998888999999999999999999999999744211 11111111
Q ss_pred hcCCCCh---hHHHHHHHHHHHHhhccCCCCCccc
Q 004388 630 QAGDWPI---KETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 630 ~~~~~p~---~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
....||. ....++++++.+.|+.+|..|--..
T Consensus 273 d~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 273 DDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred hhccccccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 2234443 3568899999999999999995543
No 423
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=3.5e-17 Score=166.43 Aligned_cols=132 Identities=23% Similarity=0.319 Sum_probs=109.7
Q ss_pred eeeccCCcEEEEEEEECCeEEEEEEEccCCch--------hhHHHHHHHHHHHhcCCCceeeeccc--ccCCceEEEEec
Q 004388 409 LRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNI--------QNKQFLQELEVLSKIRHPHLLLLLGA--CPDHGCLVYEYM 478 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~--------~~~~f~~Ev~il~~l~Hpniv~l~g~--~~~~~~LV~Ey~ 478 (757)
..||+|++|.||+|.+.+..+++|+....... ....+.+|+.++..+.|+++.....+ ..+..++||||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 46899999999999999899999987654321 12457889999999999887654444 455668999999
Q ss_pred CCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 479 ENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 479 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
+|++|.+.+.... + .+..++.+++.+|.+||+.+ ++|||++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSNG------M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999885421 2 77899999999999999988 99999999999999 88999999999864
No 424
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=3.1e-17 Score=165.32 Aligned_cols=127 Identities=26% Similarity=0.387 Sum_probs=105.0
Q ss_pred eccCCcEEEEEEEECCeEEEEEEEccCCc--------hhhHHHHHHHHHHHhcCCCce--eeecccccCCceEEEEecCC
Q 004388 411 IGMGGYGTVYKGTFHHTFAAVKVLQSKGN--------IQNKQFLQELEVLSKIRHPHL--LLLLGACPDHGCLVYEYMEN 480 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~--------~~~~~f~~Ev~il~~l~Hpni--v~l~g~~~~~~~LV~Ey~~~ 480 (757)
||+|+||.||+|.+.+..+++|+...... ....++.+|+.++..+.|+++ ..+++...+..++||||++|
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g 81 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEG 81 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECC
Confidence 89999999999999999999998654321 123557789999999988754 45555556666999999999
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 481 GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 481 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
++|.+.+.... ..++.+++.+|.+||+.+ ++|||++|.|||++ ++.++|+|||++..
T Consensus 82 ~~l~~~~~~~~----------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 82 KPLKDVIEEGN----------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ccHHHHHhhcH----------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99998774321 078999999999999988 99999999999999 89999999999875
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=8e-17 Score=190.60 Aligned_cols=195 Identities=25% Similarity=0.299 Sum_probs=152.0
Q ss_pred HHHHhhcCCccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCcee----eeccc--ccC
Q 004388 397 EIESATLSFSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLL----LLLGA--CPD 469 (757)
Q Consensus 397 ei~~at~~f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv----~l~g~--~~~ 469 (757)
+++.....|.+.+.||+|+||.||+|... +..||+|+-++..... |.-=.+++.+|+ |-+. .+..+ |.+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk-~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLK-PQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhc-hhhhcchHHHHHHHccCC
Confidence 44555667888899999999999999874 6799999987654321 222234555555 3333 33222 356
Q ss_pred CceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-------CCceE
Q 004388 470 HGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-------NLVSK 542 (757)
Q Consensus 470 ~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-------~~~~K 542 (757)
..+||+||.+-|+|.|++. ....++|..+..++.|++..+..||..+ ||||||||+|+||.. +..++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceE
Confidence 6789999999999999986 3456999999999999999999999998 999999999999942 45689
Q ss_pred EeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCC
Q 004388 543 IGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAK 605 (757)
Q Consensus 543 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~ 605 (757)
|+|||-+.-+.--... .+....++|-.+-.+|...+..++...|.|.|+-+++-||.|+
T Consensus 842 lIDfG~siDm~lfp~~----~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDG----TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred EEecccceeeeEcCCC----cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 9999998644322211 1235568899999999999999999999999999999999997
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=8.3e-17 Score=166.92 Aligned_cols=141 Identities=18% Similarity=0.156 Sum_probs=108.2
Q ss_pred CccceeeccCCcEEEEEEE-E--CCeEEEEEEEccCCch------------------------hhHHHHHHHHHHHhcCC
Q 004388 405 FSENLRIGMGGYGTVYKGT-F--HHTFAAVKVLQSKGNI------------------------QNKQFLQELEVLSKIRH 457 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~-~--~~~~vAvK~l~~~~~~------------------------~~~~f~~Ev~il~~l~H 457 (757)
|.....||.|+||.||+|. . .+..||||+++..... ....+..|+.++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6677889999999999998 2 5779999998754210 01235689999999975
Q ss_pred C--ceeeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeee
Q 004388 458 P--HLLLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILL 535 (757)
Q Consensus 458 p--niv~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILl 535 (757)
. .+...+++ ...+|||||++|++|...+... .++.......++.||+.+|.+||..+ .|+||||||+|||+
T Consensus 110 ~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIli 182 (237)
T smart00090 110 AGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNILV 182 (237)
T ss_pred cCCCCCeeeEe--cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEEE
Confidence 3 34444543 2458999999998887654222 23555567789999999999999976 39999999999999
Q ss_pred cCCCceEEeeecCccccC
Q 004388 536 DHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 536 d~~~~~KL~DFGla~~~~ 553 (757)
+ ++.++|+|||++....
T Consensus 183 ~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 183 H-DGKVVIIDVSQSVELD 199 (237)
T ss_pred E-CCCEEEEEChhhhccC
Confidence 9 8899999999987544
No 427
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=6.7e-17 Score=187.48 Aligned_cols=143 Identities=24% Similarity=0.317 Sum_probs=114.0
Q ss_pred CHHHHHHhhcCCccceeeccCCcEEEEEEEECCeEEEEEEEccCC--------chhhHHHHHHHHHHHhcCCCceeeecc
Q 004388 394 TWEEIESATLSFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKG--------NIQNKQFLQELEVLSKIRHPHLLLLLG 465 (757)
Q Consensus 394 ~~~ei~~at~~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~--------~~~~~~f~~Ev~il~~l~Hpniv~l~g 465 (757)
+|.........|...+.||+|+||.||+|.+.+..+++|+..... ......+.+|++++..++|++++....
T Consensus 324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 403 (535)
T PRK09605 324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVI 403 (535)
T ss_pred eeccccccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEE
Confidence 344444445556678899999999999999887766666543221 112356889999999999999887655
Q ss_pred cc--cCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEE
Q 004388 466 AC--PDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKI 543 (757)
Q Consensus 466 ~~--~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL 543 (757)
++ .+..++||||++|++|.+++. ....++.+++.+|.|||+.+ |+||||||+|||+ .++.++|
T Consensus 404 ~~~~~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~l 468 (535)
T PRK09605 404 YDVDPEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYL 468 (535)
T ss_pred EEEeCCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEE
Confidence 54 345689999999999999874 35678999999999999988 9999999999999 6789999
Q ss_pred eeecCccc
Q 004388 544 GDVGLSTM 551 (757)
Q Consensus 544 ~DFGla~~ 551 (757)
+|||+++.
T Consensus 469 iDFGla~~ 476 (535)
T PRK09605 469 IDFGLGKY 476 (535)
T ss_pred EeCccccc
Confidence 99999975
No 428
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.69 E-value=6.7e-18 Score=184.40 Aligned_cols=173 Identities=29% Similarity=0.395 Sum_probs=135.9
Q ss_pred ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 471 GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 471 ~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.++.|++|.-.+|.++|.+.......+|.....++.|++.|+.| .+ .+|+|+||.||+...+..+||.|||+..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhee
Confidence 47899999999999999877666678899999999999999999 55 8999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhC-CCCccccchhhhhhchhhHHHHhhh
Q 004388 551 MLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTA-KPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
...............+...||..||+||.+.+..|+.++||||||+||+||++- ..+|. ..+.+. |-
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e---------r~~t~~---d~ 472 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE---------RIATLT---DI 472 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH---------HHHhhh---hh
Confidence 776554222223345677999999999999999999999999999999999982 22221 111222 22
Q ss_pred hcCCCChh---HHHHHHHHHHHHhhccCCCCCccc
Q 004388 630 QAGDWPIK---ETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 630 ~~~~~p~~---~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.-+.||+. .-+.-..|+++++.+.|.+||+..
T Consensus 473 r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 473 RDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred hcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHH
Confidence 23455532 224456899999999999999543
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=2.1e-16 Score=165.96 Aligned_cols=199 Identities=19% Similarity=0.219 Sum_probs=140.7
Q ss_pred CCCceeeecccccCC-----------------------------ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHH
Q 004388 456 RHPHLLLLLGACPDH-----------------------------GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAW 506 (757)
Q Consensus 456 ~Hpniv~l~g~~~~~-----------------------------~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~ 506 (757)
+|||||+++++|.+. .||||.-.+ .+|..+|..+. .+.....-|+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence 699999999987321 167887664 58888886544 45567778999
Q ss_pred HHHHHHHHHhhCCCCCEEEcCCCCCCeee--cCCC--ceEEeeecCccccCCCCCCccccccccCCcccccCCCcccccc
Q 004388 507 EVASALAFLHNTKPKPIIHRDMKPGNILL--DHNL--VSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT 582 (757)
Q Consensus 507 qia~aL~~LH~~~~~~ivHrDLKp~NILl--d~~~--~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 582 (757)
|+++|+.|||.++ |.|||||.+|||| |+++ .+.|+|||.+---....-...........-|....||||+...
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999998 9999999999999 4444 4688999987533222111111222334567888999998754
Q ss_pred CC------CCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCC
Q 004388 583 GL------ISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKD 656 (757)
Q Consensus 583 ~~------~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~ 656 (757)
.+ .-.++|.|+.|-+.||+++...||..... ..++..+ ......+..|...++.+.+|+...++.+|.+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe--m~L~~r~---Yqe~qLPalp~~vpp~~rqlV~~lL~r~psk 500 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE--MLLDTRT---YQESQLPALPSRVPPVARQLVFDLLKRDPSK 500 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccch--heechhh---hhhhhCCCCcccCChHHHHHHHHHhcCCccc
Confidence 32 23579999999999999999999974211 1111111 1122334456677888999999999999999
Q ss_pred CCccchhhhhHH
Q 004388 657 RPDLKNQVLPVL 668 (757)
Q Consensus 657 RPs~~~~vl~~L 668 (757)
||+.. +...+|
T Consensus 501 Rvsp~-iAANvl 511 (598)
T KOG4158|consen 501 RVSPN-IAANVL 511 (598)
T ss_pred cCCcc-HHHhHH
Confidence 99975 333343
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2e-16 Score=159.63 Aligned_cols=137 Identities=18% Similarity=0.101 Sum_probs=107.0
Q ss_pred CCccceeeccCCcEEEEEEEE-CCeEEEEEEEccCCch----------------------hhHHHHHHHHHHHhcCCCc-
Q 004388 404 SFSENLRIGMGGYGTVYKGTF-HHTFAAVKVLQSKGNI----------------------QNKQFLQELEVLSKIRHPH- 459 (757)
Q Consensus 404 ~f~~~~~IG~G~~G~Vyk~~~-~~~~vAvK~l~~~~~~----------------------~~~~f~~Ev~il~~l~Hpn- 459 (757)
.|.....||.|+||.||++.. .++.||||++...... ....+..|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 366678899999999999988 4779999987643210 1123567899999998874
Q ss_pred -eeeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC
Q 004388 460 -LLLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN 538 (757)
Q Consensus 460 -iv~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~ 538 (757)
++..++. ...++||||++|++|...... .....++.+++.++.++|..+ |+||||||+|||++.+
T Consensus 96 ~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~ 161 (198)
T cd05144 96 PVPKPIDW--NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCceeec--CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCC
Confidence 4444443 344899999999999765321 234578899999999999987 9999999999999999
Q ss_pred CceEEeeecCccccCC
Q 004388 539 LVSKIGDVGLSTMLNS 554 (757)
Q Consensus 539 ~~~KL~DFGla~~~~~ 554 (757)
+.++|+|||++.....
T Consensus 162 ~~~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcEEEEECCccccCCC
Confidence 9999999999965543
No 431
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.63 E-value=4e-15 Score=142.36 Aligned_cols=117 Identities=44% Similarity=0.682 Sum_probs=100.9
Q ss_pred CEEEEecCCCCcccCCCCCccccccccHHHHHHHHHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHh
Q 004388 1 MVMITDLSASLAIGHPVGNFIPIEQVRDDVAAAYKQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVAS 80 (757)
Q Consensus 1 ~~lvHV~~~~~~i~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~ 80 (757)
++||||.++....+++.+. .+....+....++++++++.++...|...|+.++.+++++++++++|++++.+
T Consensus 30 l~ll~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~I~~~a~~ 101 (146)
T cd01989 30 IVLVHVHPPITSIPSSSGK--------LEVASAYKQEEDKEAKELLLPYRCFCSRKGVQCEDVVLEDDDVAKAIVEYVAD 101 (146)
T ss_pred EEEEEeccCcccCCCCccc--------hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEeCCcHHHHHHHHHHH
Confidence 5789998876554444332 12345566777788999999999999999999999999998999999999999
Q ss_pred cCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCceEEEEecC
Q 004388 81 CNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFCTVYGVEKG 125 (757)
Q Consensus 81 ~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C~V~vv~kg 125 (757)
+++|.||||+++++.+.+.+.+++++..|++.+|.+|+|+||++|
T Consensus 102 ~~~dlIV~Gs~g~~~l~~~~~gssva~~Vi~~a~~~c~Vlvv~~~ 146 (146)
T cd01989 102 HGITKLVMGASSDNHFSMKFKKSDVASSVLKEAPDFCTVYVVSKG 146 (146)
T ss_pred cCCCEEEEeccCCCceeecccCCchhHHHHhcCCCCceEEEEeCc
Confidence 999999999999999999887678999999999999999999998
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=3.8e-15 Score=141.25 Aligned_cols=132 Identities=23% Similarity=0.224 Sum_probs=111.4
Q ss_pred ceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCC--CceeeecccccC--CceEEEEecCCCCH
Q 004388 408 NLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRH--PHLLLLLGACPD--HGCLVYEYMENGSL 483 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~H--pniv~l~g~~~~--~~~LV~Ey~~~gsL 483 (757)
...||.|+++.||++...+..+++|....... ...+.+|+.++..++| ++++++++++.. ..+++|||++|+.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 46799999999999999888999999866543 5678899999999976 588888887754 45899999998877
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 484 EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 484 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
..+ +......++.+++.+|.+||.....+++|+||+|.|||++.++.++++|||++..
T Consensus 81 ~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 81 DEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 543 4456778899999999999987545699999999999999999999999999875
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=4.1e-15 Score=148.22 Aligned_cols=137 Identities=18% Similarity=0.205 Sum_probs=96.3
Q ss_pred ceeeccCCcEEEEEEEEC-CeEEEEEEEccCCch--hhHHH----------------------HHHHHHHHhcCCCc--e
Q 004388 408 NLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNI--QNKQF----------------------LQELEVLSKIRHPH--L 460 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~--~~~~f----------------------~~Ev~il~~l~Hpn--i 460 (757)
.+.||+|+||.||+|... +..||||++...... ....+ ..|...+.++.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 356999999999999886 779999998754221 11111 34566666664432 3
Q ss_pred eeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCC
Q 004388 461 LLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNL 539 (757)
Q Consensus 461 v~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~ 539 (757)
...+++ ...++||||++++.+......... .. .....++.+++.++.++|. .+ |+||||||+|||++ ++
T Consensus 82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec--CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CC
Confidence 333332 345899999998543221111100 00 4567899999999999999 77 99999999999999 99
Q ss_pred ceEEeeecCccccCC
Q 004388 540 VSKIGDVGLSTMLNS 554 (757)
Q Consensus 540 ~~KL~DFGla~~~~~ 554 (757)
.++|+|||.+.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 999999999976543
No 434
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=99.58 E-value=5.8e-16 Score=129.85 Aligned_cols=69 Identities=42% Similarity=0.878 Sum_probs=60.1
Q ss_pred CCCCccCccchhcccCCcccCCCcccchHHHHHHHHh-CCCCCCCCCCCCCCCCCchHHHHHHHHHHhhC
Q 004388 689 PPNHFICPILKEVMNEPCVAADGYTYDRKAIEEWLQE-NDKSPITDLPLPNKNLLPNYTLLSAILDWKSK 757 (757)
Q Consensus 689 ~p~~ficPi~~evM~dp~iaadG~tye~~aIe~wl~~-~~~sP~t~~~l~~~~l~pn~~l~~~~~~w~~~ 757 (757)
.|..|.|||+.++|.||+++.+|+|||+.+|+.||.. +.+||+|+.++.+.+|+||++||++|++|+.+
T Consensus 1 iP~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~~ 70 (73)
T PF04564_consen 1 IPDEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCAE 70 (73)
T ss_dssp SSGGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHHH
T ss_pred CCcccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999998 99999999999999999999999999999863
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=1.7e-14 Score=149.88 Aligned_cols=133 Identities=18% Similarity=0.198 Sum_probs=104.5
Q ss_pred ceeec-cCCcEEEEEEEECCeEEEEEEEccCC-------------chhhHHHHHHHHHHHhcCCCce--eeecccccC--
Q 004388 408 NLRIG-MGGYGTVYKGTFHHTFAAVKVLQSKG-------------NIQNKQFLQELEVLSKIRHPHL--LLLLGACPD-- 469 (757)
Q Consensus 408 ~~~IG-~G~~G~Vyk~~~~~~~vAvK~l~~~~-------------~~~~~~f~~Ev~il~~l~Hpni--v~l~g~~~~-- 469 (757)
...|| .||.|+||++...+..++||.+.... ......+.+|++++.+|.|+++ +..++++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 34688 89999999999988899999875321 1223567889999999998775 566665322
Q ss_pred ----CceEEEEecCC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEe
Q 004388 470 ----HGCLVYEYMEN-GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIG 544 (757)
Q Consensus 470 ----~~~LV~Ey~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~ 544 (757)
..++||||++| .+|.+++... +++.. .+.+|+.+|.+||..+ |+||||||.|||++.++.++|+
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 12599999997 6898887432 24432 3678999999999988 9999999999999999999999
Q ss_pred eecCccc
Q 004388 545 DVGLSTM 551 (757)
Q Consensus 545 DFGla~~ 551 (757)
|||.+..
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9999875
No 436
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=7.8e-15 Score=170.48 Aligned_cols=248 Identities=19% Similarity=0.243 Sum_probs=178.9
Q ss_pred cCCccceeeccCCcEEEEEEEEC---CeEEEEEEEccCC--chhhHHHHHHHHHHHhcC-CCceeeecccccCC--ceEE
Q 004388 403 LSFSENLRIGMGGYGTVYKGTFH---HTFAAVKVLQSKG--NIQNKQFLQELEVLSKIR-HPHLLLLLGACPDH--GCLV 474 (757)
Q Consensus 403 ~~f~~~~~IG~G~~G~Vyk~~~~---~~~vAvK~l~~~~--~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~--~~LV 474 (757)
..|.....||+|+|+.|-..... ...+|+|.+.... .........|..+-..+. |+|++.+++...+. .+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45666777999999999887652 2356666554332 222333455788777777 99999999988554 4789
Q ss_pred EEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCEEEcCCCCCCeeecCCC-ceEEeeecCcccc
Q 004388 475 YEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLH-NTKPKPIIHRDMKPGNILLDHNL-VSKIGDVGLSTML 552 (757)
Q Consensus 475 ~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH-~~~~~~ivHrDLKp~NILld~~~-~~KL~DFGla~~~ 552 (757)
++|..||++.+.+.. ......+....-.++.|+..+|.|+| ..+ +.||||||+|.+++..+ .+|++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCccccccccccccc-CCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999999887731 11213445566788999999999999 766 99999999999999999 9999999999887
Q ss_pred CC-CCCCccccccccCCcc-cccCCCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhh
Q 004388 553 NS-DPSFVSTTYKNTGPVG-TLCYIDPEYQRT-GLISPKSDVYAYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDA 629 (757)
Q Consensus 553 ~~-~~~~~~~~~~~~~~~g-t~~Y~aPE~~~~-~~~s~ksDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~ 629 (757)
.. .... ......+| ++.|+|||...+ ....+..|+||.|+++.-+++|..|+....... +........
T Consensus 176 ~~~~g~~----~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-----~~~~~~~~~ 246 (601)
T KOG0590|consen 176 RNKNGAE----RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-----GRYSSWKSN 246 (601)
T ss_pred cccCCcc----eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-----ccceeeccc
Confidence 76 3221 12234577 999999998876 456788999999999999999999997443222 111111111
Q ss_pred h-c-CC-CChhHHHHHHHHHHHHhhccCCCCCccchh
Q 004388 630 Q-A-GD-WPIKETKELAALGLSCAELRRKDRPDLKNQ 663 (757)
Q Consensus 630 ~-~-~~-~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~ 663 (757)
. . .. ...........++.+++..+|..|.+..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred ccccccCccccCChhhhhcccccccCCchhccccccc
Confidence 1 0 01 112345667888899999999999998753
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.40 E-value=1.1e-12 Score=147.92 Aligned_cols=137 Identities=19% Similarity=0.193 Sum_probs=98.3
Q ss_pred eeeccCCcEEEEEEEE-CCeEEEEEEEccCCchhh----------------------------------------HHHHH
Q 004388 409 LRIGMGGYGTVYKGTF-HHTFAAVKVLQSKGNIQN----------------------------------------KQFLQ 447 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~-~~~~vAvK~l~~~~~~~~----------------------------------------~~f~~ 447 (757)
..||.|++|.||+|++ +|+.||||+.++...... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 5799999999999998 478999999876421100 02455
Q ss_pred HHHHHHhcC-----CCce--eeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHH-HHHHHhhCC
Q 004388 448 ELEVLSKIR-----HPHL--LLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVAS-ALAFLHNTK 519 (757)
Q Consensus 448 Ev~il~~l~-----Hpni--v~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~-aL~~LH~~~ 519 (757)
|...+.+++ +|++ .+.+..+....+|||||++|++|.+.+...... . .+..++..++. .+..+|..+
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG--L---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC--C---CHHHHHHHHHHHHHHHHHhCC
Confidence 666666652 3332 233333344568999999999998876432211 2 23456666666 467889877
Q ss_pred CCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 520 PKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 520 ~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
++|+|++|.||+++.++.++|+|||++..++
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999997654
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.40 E-value=9.3e-13 Score=128.79 Aligned_cols=130 Identities=20% Similarity=0.156 Sum_probs=100.3
Q ss_pred eeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCce-eeecccccCCceEEEEecCCCCHHHHH
Q 004388 409 LRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHL-LLLLGACPDHGCLVYEYMENGSLEDRL 487 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpni-v~l~g~~~~~~~LV~Ey~~~gsL~~~L 487 (757)
..|+.|.++.||++...+..+++|+...... ....+..|+.++..+.+.++ .+++.+..+..++||||++|.++.+.
T Consensus 4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~- 81 (170)
T cd05151 4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE- 81 (170)
T ss_pred eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc-
Confidence 4689999999999999999999999765432 12346789999998865443 45566656667999999999887643
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 488 YRKNNTPPIPWFERYRIAWEVASALAFLHNTK--PKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 488 ~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~--~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
. . ....++.+++.+|..||..+ +..++|||++|.||+++ ++.++|+|||.+..
T Consensus 82 ---~----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 82 ---D----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ---c----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 0 1 11345679999999999987 34479999999999999 67899999998763
No 439
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=9.1e-13 Score=136.19 Aligned_cols=201 Identities=25% Similarity=0.336 Sum_probs=138.6
Q ss_pred HHHHhcCCCceeeecccccCCc-------eEEEEecCCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 004388 450 EVLSKIRHPHLLLLLGACPDHG-------CLVYEYMENGSLEDRLYRK-NNTPPIPWFERYRIAWEVASALAFLHNTKPK 521 (757)
Q Consensus 450 ~il~~l~Hpniv~l~g~~~~~~-------~LV~Ey~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~ 521 (757)
.-|-++-|-|||++..||.+.. .++.|||..|+|..+|.+. .....+......+|+.||+.||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-P 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-C
Confidence 3455667999999999996543 5889999999999999863 23344666777899999999999999998 5
Q ss_pred CEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcc-ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHH
Q 004388 522 PIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVS-TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQ 600 (757)
Q Consensus 522 ~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~e 600 (757)
||+|+++...-|++..+|-+||.--.....- ..... .........|-++|.+||+-.....+.++|||+||...++
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h---~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTH---PSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccc---hhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 7999999999999999999988532211110 00001 1111122356789999998877788889999999999999
Q ss_pred HHhCCCC-ccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccchhh
Q 004388 601 LLTAKPA-IAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKNQV 664 (757)
Q Consensus 601 lltG~~P-f~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~~v 664 (757)
|..|..- -.....+ .....+...+-..-. ..=+.++.+|++-.|..||++..++
T Consensus 275 mailEiq~tnseS~~---~~ee~ia~~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 275 MAILEIQSTNSESKV---EVEENIANVIIGLEN-------GLQRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred HHHheeccCCCccee---ehhhhhhhheeeccC-------ccccCcCcccccCCCCCCcchhhhh
Confidence 9887522 1111111 111222222211111 1124577899999999999998644
No 440
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.23 E-value=8.5e-12 Score=139.41 Aligned_cols=243 Identities=22% Similarity=0.254 Sum_probs=171.5
Q ss_pred CCccceeecc--CCcEEEEEEEE----CCeEEEEEEEccC--CchhhHHHHHHHHHHHhcC-CCceeeecccccCCc--e
Q 004388 404 SFSENLRIGM--GGYGTVYKGTF----HHTFAAVKVLQSK--GNIQNKQFLQELEVLSKIR-HPHLLLLLGACPDHG--C 472 (757)
Q Consensus 404 ~f~~~~~IG~--G~~G~Vyk~~~----~~~~vAvK~l~~~--~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~~~--~ 472 (757)
.|.....+|. |.+|.||.+.. ....+|+|.-+.. .......=.+|+....+++ |+|.++.+..+.+.. +
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556677999 99999999876 2347888873322 2223333346777777775 999999888887665 6
Q ss_pred EEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeec
Q 004388 473 LVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVAS----ALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVG 547 (757)
Q Consensus 473 LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~----aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFG 547 (757)
+-.|++ +.+|..+...... -++......+..+... ||.++|+.+ ++|-|+||.||++..+ ..++++|||
T Consensus 195 iqtE~~-~~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeccc-cchhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 667777 4788777655443 2566677777788888 999999988 9999999999999999 889999999
Q ss_pred CccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCcccc-chhhhhhchhhHHHH
Q 004388 548 LSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIAIT-HKVETAIDEDNLAEI 626 (757)
Q Consensus 548 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~~~-~~~~~~~~~~~l~~~ 626 (757)
+...+.+..-. ..........|...|++||..+ +.++...|+|+||.++++..+|....... ...+..++...+.
T Consensus 269 ~v~~i~~~~~~-~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip-- 344 (524)
T KOG0601|consen 269 LVSKISDGNFS-SVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP-- 344 (524)
T ss_pred eeEEccCCccc-cceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc--
Confidence 99887765421 1112223447888999999765 56889999999999999999987654321 1222222222111
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 627 LDAQAGDWPIKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 627 ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.++.......+...+..++..+|..|++.+
T Consensus 345 -----~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q 374 (524)
T KOG0601|consen 345 -----LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQ 374 (524)
T ss_pred -----hhhhcCcchhhhhHHHHhcCcchhhhhHHH
Confidence 011112245566688899999999998876
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.21 E-value=5.4e-11 Score=136.04 Aligned_cols=142 Identities=18% Similarity=0.148 Sum_probs=91.4
Q ss_pred hcCCccceeeccCCcEEEEEEEEC--CeEEEEEEEccCCchh----------------------------------hH--
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH--HTFAAVKVLQSKGNIQ----------------------------------NK-- 443 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~--~~~vAvK~l~~~~~~~----------------------------------~~-- 443 (757)
...|+. ..||.|++|.||+|+++ |+.||||+.++..... .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 334655 67999999999999985 6799999997652110 01
Q ss_pred ----HHHHHHHHHHhcC----CCceeeeccc---ccCCceEEEEecCCCCHHHHH--hhcCCC-CCCCHHHHHHHHHHHH
Q 004388 444 ----QFLQELEVLSKIR----HPHLLLLLGA---CPDHGCLVYEYMENGSLEDRL--YRKNNT-PPIPWFERYRIAWEVA 509 (757)
Q Consensus 444 ----~f~~Ev~il~~l~----Hpniv~l~g~---~~~~~~LV~Ey~~~gsL~~~L--~~~~~~-~~l~~~~~~~i~~qia 509 (757)
+|.+|+..+.+++ +.+.+.+-.. +....+|||||+.|+.|.+.- ...+.. ..+.......++.|
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-- 275 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-- 275 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH--
Confidence 2445555555552 3333333333 334568999999999998742 222210 01211112222223
Q ss_pred HHHHHHhhCCCCCEEEcCCCCCCeeecCCC----ceEEeeecCccccCC
Q 004388 510 SALAFLHNTKPKPIIHRDMKPGNILLDHNL----VSKIGDVGLSTMLNS 554 (757)
Q Consensus 510 ~aL~~LH~~~~~~ivHrDLKp~NILld~~~----~~KL~DFGla~~~~~ 554 (757)
+...| ++|+|+||.||+++.+| .++++|||++..++.
T Consensus 276 -----if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 -----VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33445 99999999999999888 999999999987764
No 442
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=99.15 E-value=4.3e-11 Score=97.50 Aligned_cols=62 Identities=47% Similarity=0.976 Sum_probs=60.3
Q ss_pred ccCccchhcccCCcccCCCcccchHHHHHHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 004388 693 FICPILKEVMNEPCVAADGYTYDRKAIEEWLQENDKSPITDLPLPNKNLLPNYTLLSAILDW 754 (757)
Q Consensus 693 ficPi~~evM~dp~iaadG~tye~~aIe~wl~~~~~sP~t~~~l~~~~l~pn~~l~~~~~~w 754 (757)
++|||.+++|.||++...|++|++..|..|+..+.+||+|+.++...+|+||++||++|++|
T Consensus 2 ~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~~~~cP~~~~~~~~~~l~~~~~l~~~i~~~ 63 (63)
T smart00504 2 FLCPISLEVMKDPVILPSGQTYERRAIEKWLLSHGTDPVTGQPLTHEDLIPNLALKSAIQEW 63 (63)
T ss_pred cCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHHCCCCCCCcCCCChhhceeCHHHHHHHHhC
Confidence 68999999999999999999999999999999888999999999999999999999999999
No 443
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=3.2e-10 Score=110.09 Aligned_cols=128 Identities=28% Similarity=0.379 Sum_probs=102.0
Q ss_pred eeccCCcEEEEEEEECCeEEEEEEEccCC--------chhhHHHHHHHHHHHhcC--CCceeeecccccCCceEEEEecC
Q 004388 410 RIGMGGYGTVYKGTFHHTFAAVKVLQSKG--------NIQNKQFLQELEVLSKIR--HPHLLLLLGACPDHGCLVYEYME 479 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~--------~~~~~~f~~Ev~il~~l~--Hpniv~l~g~~~~~~~LV~Ey~~ 479 (757)
.+++|+-+.+|.+.+.+..+.+|.=.+.. .....+-.+|..+|.+++ -=+...++.+.++...|+|||++
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 47899999999998888777777643321 112344678999999885 34556777777888899999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
|..|.+.+... +..++..+-.-+.-||..+ |||+||.++||++..++ +.++||||+..
T Consensus 83 G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 83 GELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999888543 2467788888899999998 99999999999998765 89999999874
No 444
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=4e-10 Score=112.78 Aligned_cols=136 Identities=18% Similarity=0.142 Sum_probs=96.5
Q ss_pred eeeccCCcEEEEEEEEC--------CeEEEEEEEccCCc----------------------hhhHHHH----HHHHHHHh
Q 004388 409 LRIGMGGYGTVYKGTFH--------HTFAAVKVLQSKGN----------------------IQNKQFL----QELEVLSK 454 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~--------~~~vAvK~l~~~~~----------------------~~~~~f~----~Ev~il~~ 454 (757)
..||.|--+.||.|... +..+|||+.+.... .....+. +|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 36899999999999764 36899999753210 0112233 79999998
Q ss_pred cCC--CceeeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCEEEcCCCCC
Q 004388 455 IRH--PHLLLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFL-HNTKPKPIIHRDMKPG 531 (757)
Q Consensus 455 l~H--pniv~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~L-H~~~~~~ivHrDLKp~ 531 (757)
+.. -++...+++ ...+|||||+.++.+.....+. ..++......+..+++.+|..| |..+ ||||||+|.
T Consensus 83 l~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHH
Confidence 852 345555543 5678999999765442211111 1244445667889999999999 7877 999999999
Q ss_pred CeeecCCCceEEeeecCccccC
Q 004388 532 NILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 532 NILld~~~~~KL~DFGla~~~~ 553 (757)
|||++ ++.+.|+|||.+-...
T Consensus 155 NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HEEEE-CCcEEEEECCCceeCC
Confidence 99997 4679999999886554
No 445
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.13 E-value=1.1e-09 Score=123.82 Aligned_cols=162 Identities=19% Similarity=0.229 Sum_probs=120.4
Q ss_pred CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccCCc--eEEEEecCCCCHHHHHhhcCCCCCCCHHHHH
Q 004388 425 HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPDHG--CLVYEYMENGSLEDRLYRKNNTPPIPWFERY 502 (757)
Q Consensus 425 ~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~~~--~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~ 502 (757)
.+.+|.|.+.............+-+..|+.++||||++++..+.... |||.|-+. .|..++...+ .....
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~------~~~v~ 107 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG------KEEVC 107 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH------HHHHH
Confidence 35578888776654434455677889999999999999999987666 99999984 6777776543 34667
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCcccccc
Q 004388 503 RIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRT 582 (757)
Q Consensus 503 ~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 582 (757)
-.+.||+.||.|||..+ .++|++|.-+.|+|+..|..||++|-++........ ......---.|..|+....
T Consensus 108 ~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc------ccccchhhhcccChhhcCc
Confidence 78899999999999765 399999999999999999999999998865443221 0011111223556654322
Q ss_pred CCCCCcchhhhHHHHHHHHHhC
Q 004388 583 GLISPKSDVYAYGMVILQLLTA 604 (757)
Q Consensus 583 ~~~s~ksDvwSlGvil~elltG 604 (757)
.. -..|.|-|||++++++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 21 346999999999999999
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.13 E-value=3.4e-10 Score=115.30 Aligned_cols=139 Identities=24% Similarity=0.287 Sum_probs=107.2
Q ss_pred eeeccCCcEEEEEEEECC-eEEEEEEEccCCc-hhhHHHHHHHHHHHhcCC--CceeeecccccC-----CceEEEEecC
Q 004388 409 LRIGMGGYGTVYKGTFHH-TFAAVKVLQSKGN-IQNKQFLQELEVLSKIRH--PHLLLLLGACPD-----HGCLVYEYME 479 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~-~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~H--pniv~l~g~~~~-----~~~LV~Ey~~ 479 (757)
..||.|.++.||++...+ ..+++|+...... .....+.+|++++..+.+ .++.+++.++.+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 468999999999998876 7899998765432 134568899999999975 345667777655 3489999999
Q ss_pred CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------------
Q 004388 480 NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTK---------------------------------------- 519 (757)
Q Consensus 480 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~---------------------------------------- 519 (757)
|++|.+.+.. ..++...+..++.+++.+|.+||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888765421 23666677788888888888888531
Q ss_pred -------------CCCEEEcCCCCCCeeecC--CCceEEeeecCccc
Q 004388 520 -------------PKPIIHRDMKPGNILLDH--NLVSKIGDVGLSTM 551 (757)
Q Consensus 520 -------------~~~ivHrDLKp~NILld~--~~~~KL~DFGla~~ 551 (757)
+..++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 256899999999999998 67789999998764
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.12 E-value=2.4e-11 Score=141.96 Aligned_cols=248 Identities=19% Similarity=0.225 Sum_probs=169.2
Q ss_pred hhcCCccceeeccCCcEEEEEEEECCe--EEEEEEEccCCch---hhHHHHHHHHHHHhcCCCceeeeccc--ccCCceE
Q 004388 401 ATLSFSENLRIGMGGYGTVYKGTFHHT--FAAVKVLQSKGNI---QNKQFLQELEVLSKIRHPHLLLLLGA--CPDHGCL 473 (757)
Q Consensus 401 at~~f~~~~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~~~---~~~~f~~Ev~il~~l~Hpniv~l~g~--~~~~~~L 473 (757)
..+.|....-+-.|.++.++...-.++ ..+.|+....... ..+....+-.++-..+||-++..+-. |....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 344566666778899999987654332 3344443322111 12223334444444567888877665 4566699
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
|++|+.|++|...|+..+ +.+.......+..+..+++|||... ++|+|++|.|+|...+|+.+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccc
Confidence 999999999999887654 2333334456678899999999987 8999999999999999999999999543322
Q ss_pred CCC---CC--------------------cc--ccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCc
Q 004388 554 SDP---SF--------------------VS--TTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAI 608 (757)
Q Consensus 554 ~~~---~~--------------------~~--~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf 608 (757)
.-. .. .. .........||+.|.+||...+......+|+|++|+++++.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 110 00 00 001234468999999999999999999999999999999999999999
Q ss_pred cccchhhhhhchhhHHHHhhhhcCCCC---hhHHHHHHHHHHHHhhccCCCCCccc
Q 004388 609 AITHKVETAIDEDNLAEILDAQAGDWP---IKETKELAALGLSCAELRRKDRPDLK 661 (757)
Q Consensus 609 ~~~~~~~~~~~~~~l~~~ld~~~~~~p---~~~~~~l~~Li~~Cl~~~p~~RPs~~ 661 (757)
.....-. ..+-+-.....|| ...+.....++.+.+..+|.+|-.+.
T Consensus 1036 na~tpq~-------~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQ-------IFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhh-------hhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 6432211 1111122223344 45677889999999999999997765
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.11 E-value=3e-09 Score=113.87 Aligned_cols=258 Identities=19% Similarity=0.226 Sum_probs=169.6
Q ss_pred ccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhc-CCCceee--------ecccccCC-ceEEE
Q 004388 406 SENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKI-RHPHLLL--------LLGACPDH-GCLVY 475 (757)
Q Consensus 406 ~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l-~Hpniv~--------l~g~~~~~-~~LV~ 475 (757)
...+.||+||-+.+|-.---...|| |+.+........+ -++.|... .||-+-. |+|.-... ..+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d~VA-KIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRDQVA-KIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchhhchhh-eeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3456799999999995422222333 6665443322222 23334433 4554332 22222222 25677
Q ss_pred EecCCCC-HHHHHh---hcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 476 EYMENGS-LEDRLY---RKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 476 Ey~~~gs-L~~~L~---~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
..+.|.. +.+++. +....+...|.-.++++..++.+.+-||..| .+-||+.++|||+.+++.+.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 7776642 233222 3445566899999999999999999999998 88999999999999999999987543222
Q ss_pred cCCCCCCccccccccCCcccccCCCccccc-----cCCCCCcchhhhHHHHHHHHHhC-CCCcccc-------chhhhhh
Q 004388 552 LNSDPSFVSTTYKNTGPVGTLCYIDPEYQR-----TGLISPKSDVYAYGMVILQLLTA-KPAIAIT-------HKVETAI 618 (757)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDvwSlGvil~elltG-~~Pf~~~-------~~~~~~~ 618 (757)
..++. .....+|.+.|.+||.+. +..-+...|.|.||+++++||.| ++||... ...+..+
T Consensus 167 ~~ng~-------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~I 239 (637)
T COG4248 167 NANGT-------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDI 239 (637)
T ss_pred ccCCc-------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhh
Confidence 21111 124568999999999765 23456789999999999999987 9999632 2334445
Q ss_pred chhhHHHHhhhhc------CCCChh-HHHHHHHHHHHHhhc--cCCCCCccchhhhhHHHHHHHhhhcc
Q 004388 619 DEDNLAEILDAQA------GDWPIK-ETKELAALGLSCAEL--RRKDRPDLKNQVLPVLERLKEVADRA 678 (757)
Q Consensus 619 ~~~~l~~~ld~~~------~~~p~~-~~~~l~~Li~~Cl~~--~p~~RPs~~~~vl~~L~~l~~~~~~~ 678 (757)
..+.+...-+... ..||.. .++.+..|..+|+.. .+.-||+.+ .-+..|..+...+..+
T Consensus 240 a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~-aW~aAl~al~~~L~~C 307 (637)
T COG4248 240 AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK-AWVAALDALRQQLKKC 307 (637)
T ss_pred hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH-HHHHHHHHHHHhhhhh
Confidence 5555544444332 345543 467889999999985 367899987 6777888777666554
No 449
>PRK15456 universal stress protein UspG; Provisional
Probab=99.06 E-value=9e-10 Score=104.93 Aligned_cols=109 Identities=10% Similarity=0.125 Sum_probs=84.3
Q ss_pred CEEEEecCCCCcccCCCCCccccccccHHHHHHHHHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHh
Q 004388 1 MVMITDLSASLAIGHPVGNFIPIEQVRDDVAAAYKQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVAS 80 (757)
Q Consensus 1 ~~lvHV~~~~~~i~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~ 80 (757)
++||||.++....... . .. ...+.|....++..++.|.++.......+++++..+.+| ++++.|++++.+
T Consensus 34 l~llhv~~~~~~~~~~--~-~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~v~~G-~~~~~I~~~a~~ 103 (142)
T PRK15456 34 IHLLHVLPGSASLSLH--R-FA------ADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFG-SVRDEVNELAEE 103 (142)
T ss_pred EEEEEEecCccccccc--c-cc------cchhhHHHHHHHHHHHHHHHHHHHhCCCCcceEEEEcCC-ChHHHHHHHHhh
Confidence 5799999875322111 1 00 112345666677788888888887776788899888877 999999999999
Q ss_pred cCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCceEEEEe
Q 004388 81 CNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFCTVYGVE 123 (757)
Q Consensus 81 ~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C~V~vv~ 123 (757)
+++|.||||+++++ +.+.| .|+++..|+++++ |+|.||.
T Consensus 104 ~~~DLIVmG~~g~~-~~~~l-lGS~a~~v~~~a~--~pVLvV~ 142 (142)
T PRK15456 104 LGADVVVIGSRNPS-ISTHL-LGSNASSVIRHAN--LPVLVVR 142 (142)
T ss_pred cCCCEEEEcCCCCC-cccee-cCccHHHHHHcCC--CCEEEeC
Confidence 99999999999976 66655 4999999999999 9999973
No 450
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=1.5e-10 Score=129.60 Aligned_cols=236 Identities=21% Similarity=0.232 Sum_probs=164.6
Q ss_pred hcCCccceeeccCCcEEEEEEEEC---CeEEEEEEEccCCchhhHHH--HHHHHHHHhc-CCCceeeeccccc--CCceE
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFH---HTFAAVKVLQSKGNIQNKQF--LQELEVLSKI-RHPHLLLLLGACP--DHGCL 473 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~---~~~vAvK~l~~~~~~~~~~f--~~Ev~il~~l-~Hpniv~l~g~~~--~~~~L 473 (757)
+.+|..+..||.|.|+.||.+..+ +..|++|-+.........+. ..|+-+...+ -|.|++.++..|. ++.++
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 446888999999999999987643 55888887765543332222 4566666666 4888888777664 34588
Q ss_pred EEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC-CceEEeeecCcccc
Q 004388 474 VYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN-LVSKIGDVGLSTML 552 (757)
Q Consensus 474 V~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~-~~~KL~DFGla~~~ 552 (757)
-.|||.++++...+.... -+....++++..+++.++.++|+.. ++|+|+||+||++..+ +..+++|||....+
T Consensus 344 p~e~~~~~s~~l~~~~~~---~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQ---MLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred chhhhcCcchhhhhHHHH---hcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhcccccccccc
Confidence 889999999887663222 2555677889999999999999877 9999999999999876 88899999998643
Q ss_pred CCCCCCccccccccCCcccccC-CCccccccCCCCCcchhhhHHHHHHHHHhCCCCcc-ccchhhhhhchhhHHHHhhhh
Q 004388 553 NSDPSFVSTTYKNTGPVGTLCY-IDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIA-ITHKVETAIDEDNLAEILDAQ 630 (757)
Q Consensus 553 ~~~~~~~~~~~~~~~~~gt~~Y-~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~-~~~~~~~~~~~~~l~~~ld~~ 630 (757)
.-.. .....++..| .+|.......+..+.|+||||..+.+.+||.+--. ..++. .+....
T Consensus 418 ~~~~--------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~----------~i~~~~ 479 (524)
T KOG0601|consen 418 AFSS--------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL----------TIRSGD 479 (524)
T ss_pred ceec--------ccccccccccccchhhccccccccccccccccccccccccCcccCcccccce----------eeeccc
Confidence 2110 1112233344 36666667778899999999999999999974221 11110 011111
Q ss_pred cCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 631 AGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 631 ~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
... .......+..+...+...++..||.+.+
T Consensus 480 ~p~-~~~~~~~~q~~~kv~~~~~~~~~~l~~~ 510 (524)
T KOG0601|consen 480 TPN-LPGLKLQLQVLLKVMINPDRKRRPSAVE 510 (524)
T ss_pred ccC-CCchHHhhhhhhhhhcCCccccchhhhh
Confidence 111 1223377788888899999999998763
No 451
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.01 E-value=4.5e-09 Score=101.69 Aligned_cols=141 Identities=24% Similarity=0.284 Sum_probs=102.6
Q ss_pred cceeeccCCcEEEEEEEECCeEEEEEEEccC--------CchhhHHHHHHHHHHHhcCCCc--eeeecccccCCceEEEE
Q 004388 407 ENLRIGMGGYGTVYKGTFHHTFAAVKVLQSK--------GNIQNKQFLQELEVLSKIRHPH--LLLLLGACPDHGCLVYE 476 (757)
Q Consensus 407 ~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~--------~~~~~~~f~~Ev~il~~l~Hpn--iv~l~g~~~~~~~LV~E 476 (757)
....|-+|+-+.|+++.+.|....||.-... ......+..+|+.+|.+++--. ...++-.-....+|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 4456889999999999999998888853222 1123456788999999885322 22333333456689999
Q ss_pred ecCC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCC---CceEEeeecCccc
Q 004388 477 YMEN-GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHN---LVSKIGDVGLSTM 551 (757)
Q Consensus 477 y~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~---~~~KL~DFGla~~ 551 (757)
|++| .++.+++.........+ .....++..|-..+.-||..+ ||||||..+||+|..+ ..+.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 9986 47888887654433222 223578889999999999998 9999999999999654 3458999999864
No 452
>PRK15005 universal stress protein F; Provisional
Probab=98.89 E-value=8.8e-09 Score=98.05 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=67.2
Q ss_pred HHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCc
Q 004388 38 EKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFC 117 (757)
Q Consensus 38 ~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C 117 (757)
.+++.++.+..+...+...++.+++.+.+| ++++.|++++.++++|.||||++ ++++.+.+. |+++..|++++| |
T Consensus 64 ~~~~~~~~l~~~~~~~~~~~~~~~~~v~~G-~p~~~I~~~a~~~~~DLIV~Gs~-~~~~~~~ll-GS~a~~vl~~a~--c 138 (144)
T PRK15005 64 LKAEAKSQLEEIIKKFKLPTDRVHVHVEEG-SPKDRILELAKKIPADMIIIASH-RPDITTYLL-GSNAAAVVRHAE--C 138 (144)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHHHHcCCCEEEEeCC-CCCchheee-cchHHHHHHhCC--C
Confidence 344556667777766677788888888877 89999999999999999999998 457777664 899999999999 9
Q ss_pred eEEEEe
Q 004388 118 TVYGVE 123 (757)
Q Consensus 118 ~V~vv~ 123 (757)
+|+||.
T Consensus 139 pVlvVr 144 (144)
T PRK15005 139 SVLVVR 144 (144)
T ss_pred CEEEeC
Confidence 999983
No 453
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=98.84 E-value=1.2e-08 Score=94.52 Aligned_cols=77 Identities=23% Similarity=0.280 Sum_probs=66.7
Q ss_pred HHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhC-CCCceE
Q 004388 41 KTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICV-PSFCTV 119 (757)
Q Consensus 41 ~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~a-p~~C~V 119 (757)
+.++.++.+..++...++. ..++.+.+++++|++++.+++++.||||+++++.+.+.+. ++++..|+.++ + |+|
T Consensus 46 ~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~I~~~~~~~~~dllviG~~~~~~~~~~~~-Gs~~~~v~~~a~~--~~v 120 (124)
T cd01987 46 AERRRLAEALRLAEELGAE--VVTLPGDDVAEAIVEFAREHNVTQIVVGKSRRSRWRELFR-GSLVDRLLRRAGN--IDV 120 (124)
T ss_pred HHHHHHHHHHHHHHHcCCE--EEEEeCCcHHHHHHHHHHHcCCCEEEeCCCCCchHHHHhc-ccHHHHHHHhCCC--CeE
Confidence 3456788888888887764 4466778999999999999999999999999999999875 89999999999 6 999
Q ss_pred EEE
Q 004388 120 YGV 122 (757)
Q Consensus 120 ~vv 122 (757)
+|+
T Consensus 121 ~v~ 123 (124)
T cd01987 121 HIV 123 (124)
T ss_pred EEe
Confidence 997
No 454
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=98.82 E-value=2.4e-08 Score=93.17 Aligned_cols=81 Identities=16% Similarity=0.216 Sum_probs=73.4
Q ss_pred HHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCce
Q 004388 39 KWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFCT 118 (757)
Q Consensus 39 ~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C~ 118 (757)
.+..++++..+..++...|+.++.+++.+.+++++|++++.++++|.||||+.+.+.+.+.+. ++++..|++.++ |+
T Consensus 51 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~l-Gs~~~~v~~~~~--~p 127 (132)
T cd01988 51 VQRARKLLRQAERIAASLGVPVHTIIRIDHDIASGILRTAKERQADLIIMGWHGSTSLRDRLF-GGVIDQVLESAP--CD 127 (132)
T ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEEecCCHHHHHHHHHHhcCCCEEEEecCCCCCccceec-CchHHHHHhcCC--CC
Confidence 456788999999999999999999888777999999999999999999999999998877664 889999999999 99
Q ss_pred EEEE
Q 004388 119 VYGV 122 (757)
Q Consensus 119 V~vv 122 (757)
|.||
T Consensus 128 vlvv 131 (132)
T cd01988 128 VAVV 131 (132)
T ss_pred EEEe
Confidence 9987
No 455
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.75 E-value=1.7e-07 Score=98.84 Aligned_cols=133 Identities=15% Similarity=0.032 Sum_probs=95.1
Q ss_pred CcEEEEEEEECCeEEEEEEEccCCch-----------hhHHHHHHHHHHHhcC-----CCceeeeccc--c--cCCceEE
Q 004388 415 GYGTVYKGTFHHTFAAVKVLQSKGNI-----------QNKQFLQELEVLSKIR-----HPHLLLLLGA--C--PDHGCLV 474 (757)
Q Consensus 415 ~~G~Vyk~~~~~~~vAvK~l~~~~~~-----------~~~~f~~Ev~il~~l~-----Hpniv~l~g~--~--~~~~~LV 474 (757)
....|+++.+.+..+.||........ ....+.+|...+.+|. -|.+|-+... . ....+||
T Consensus 34 ~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 34 EGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred CCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 33447788888899999976433211 1114778998888774 3433333211 1 1234899
Q ss_pred EEecCCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecC-------CCceEEeee
Q 004388 475 YEYMENG-SLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDH-------NLVSKIGDV 546 (757)
Q Consensus 475 ~Ey~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~-------~~~~KL~DF 546 (757)
+|++++. +|.+++..... .+.+...+..++.+++..+.-||..| |+|+||++.|||++. ++.+.|+||
T Consensus 114 te~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 114 TEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred EeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 9999986 89998753221 23455667789999999999999998 999999999999975 478999999
Q ss_pred cCccc
Q 004388 547 GLSTM 551 (757)
Q Consensus 547 Gla~~ 551 (757)
+.+..
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 98863
No 456
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.75 E-value=2.1e-07 Score=102.45 Aligned_cols=163 Identities=20% Similarity=0.276 Sum_probs=124.5
Q ss_pred EEEEEEEE--CCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceeeecccccC------CceEEEEecCC-CCHHHHH
Q 004388 417 GTVYKGTF--HHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLLLLGACPD------HGCLVYEYMEN-GSLEDRL 487 (757)
Q Consensus 417 G~Vyk~~~--~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~l~g~~~~------~~~LV~Ey~~~-gsL~~~L 487 (757)
.+.|++.. +|..|++|.++.+..........=++.++++.|+|+|+|..++.. ..+|||+|.++ ++|.++.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 56788875 577899999965544443334456889999999999999988752 12799999886 5787766
Q ss_pred hhcC------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCC
Q 004388 488 YRKN------------NTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSD 555 (757)
Q Consensus 488 ~~~~------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~ 555 (757)
+... .....++...+.++.|+..||.++|+.| +..+-|.|.+||++.+.+++|+.-|+.-.+..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 5321 1234677888999999999999999998 888999999999999999999988887766543
Q ss_pred CCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCC
Q 004388 556 PSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAK 605 (757)
Q Consensus 556 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~ 605 (757)
.. +-+. --.+-|.=.||.+++.|.||.
T Consensus 447 ~~--------------------~~le---~~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 447 PT--------------------EPLE---SQQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred CC--------------------cchh---HHhhhhHHHHHHHHHHHhhcc
Confidence 21 1011 123678999999999999995
No 457
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.73 E-value=7.1e-08 Score=96.24 Aligned_cols=125 Identities=20% Similarity=0.199 Sum_probs=79.5
Q ss_pred EEEEEEE-CCeEEEEEEEccCCch--------------------------hhHHHHHHHHHHHhcCCC--ceeeeccccc
Q 004388 418 TVYKGTF-HHTFAAVKVLQSKGNI--------------------------QNKQFLQELEVLSKIRHP--HLLLLLGACP 468 (757)
Q Consensus 418 ~Vyk~~~-~~~~vAvK~l~~~~~~--------------------------~~~~f~~Ev~il~~l~Hp--niv~l~g~~~ 468 (757)
.||.|.. ++..+|||+.+..... ......+|...|.++..- ++...+.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 3899887 5779999997542110 012356899999999754 44555543
Q ss_pred CCceEEEEecC--CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH-HhhCCCCCEEEcCCCCCCeeecCCCceEEee
Q 004388 469 DHGCLVYEYME--NGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAF-LHNTKPKPIIHRDMKPGNILLDHNLVSKIGD 545 (757)
Q Consensus 469 ~~~~LV~Ey~~--~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~-LH~~~~~~ivHrDLKp~NILld~~~~~KL~D 545 (757)
...+|||||++ |..+..+. ... ++......++.+++..+.. +|..+ |+||||.+.|||++.+ .+.|+|
T Consensus 79 ~~~~ivME~I~~~G~~~~~l~-~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 79 NRNVIVMEYIGEDGVPLPRLK-DVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ETTEEEEE--EETTEEGGCHH-HCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--
T ss_pred eCCEEEEEecCCCccchhhHH-hcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEe
Confidence 35689999998 65554432 211 1122445677788885555 57877 9999999999999988 899999
Q ss_pred ecCccccC
Q 004388 546 VGLSTMLN 553 (757)
Q Consensus 546 FGla~~~~ 553 (757)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99986544
No 458
>PRK09982 universal stress protein UspD; Provisional
Probab=98.67 E-value=7.9e-08 Score=91.67 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=75.0
Q ss_pred CEEEEecCCCCcccCCCCCccccccccHHHHHHHHHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHh
Q 004388 1 MVMITDLSASLAIGHPVGNFIPIEQVRDDVAAAYKQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVAS 80 (757)
Q Consensus 1 ~~lvHV~~~~~~i~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~ 80 (757)
|+||||.++..... +. ..++ . .+.+.+..++..++.+.++...+.. ..++..+..| +|++.|+++|.+
T Consensus 34 l~llhV~~~~~~~~-~~-~~~~----~---~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~v~~G-~p~~~I~~~A~~ 101 (142)
T PRK09982 34 LTLIHIDDGLSELY-PG-IYFP----A---TEDILQLLKNKSDNKLYKLTKNIQW--PKTKLRIERG-EMPETLLEIMQK 101 (142)
T ss_pred EEEEEEccCcchhc-hh-hhcc----c---hHHHHHHHHHHHHHHHHHHHHhcCC--CcceEEEEec-CHHHHHHHHHHH
Confidence 57999987643211 10 0000 0 1223444555667777777766543 3456666665 999999999999
Q ss_pred cCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCceEEEEec
Q 004388 81 CNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFCTVYGVEK 124 (757)
Q Consensus 81 ~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C~V~vv~k 124 (757)
.++|.||||++ ++++.+.+ + ++..|+++++ |+|+||..
T Consensus 102 ~~aDLIVmG~~-~~~~~~~~--~-va~~V~~~s~--~pVLvv~~ 139 (142)
T PRK09982 102 EQCDLLVCGHH-HSFINRLM--P-AYRGMINKMS--ADLLIVPF 139 (142)
T ss_pred cCCCEEEEeCC-hhHHHHHH--H-HHHHHHhcCC--CCEEEecC
Confidence 99999999986 88888887 4 9999999999 99999863
No 459
>PRK10116 universal stress protein UspC; Provisional
Probab=98.67 E-value=8.7e-08 Score=91.01 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=77.1
Q ss_pred CEEEEecCCCCcccCCCCCccccccccHHHHHHHHHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHh
Q 004388 1 MVMITDLSASLAIGHPVGNFIPIEQVRDDVAAAYKQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVAS 80 (757)
Q Consensus 1 ~~lvHV~~~~~~i~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~ 80 (757)
+.+|||.++..+.. . ......+.+.+..+++.++.|..+ +.+.|+..+.+++...+++++|++++.+
T Consensus 34 l~ll~v~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~G~~~~~I~~~a~~ 100 (142)
T PRK10116 34 ISLITLASDPEMYN----Q------FAAPMLEDLRSVMQEETQSFLDKL---IQDADYPIEKTFIAYGELSEHILEVCRK 100 (142)
T ss_pred EEEEEEccCcccch----h------hhHHHHHHHHHHHHHHHHHHHHHH---HHhcCCCeEEEEEecCCHHHHHHHHHHH
Confidence 46889976543211 1 112223455555555666665554 4567887766666667999999999999
Q ss_pred cCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCceEEEEe
Q 004388 81 CNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFCTVYGVE 123 (757)
Q Consensus 81 ~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C~V~vv~ 123 (757)
.++|.||||+++++++.+.+ +++..|++.++ |+|+||.
T Consensus 101 ~~~DLiV~g~~~~~~~~~~~---s~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 101 HHFDLVICGNHNHSFFSRAS---CSAKRVIASSE--VDVLLVP 138 (142)
T ss_pred hCCCEEEEcCCcchHHHHHH---HHHHHHHhcCC--CCEEEEe
Confidence 99999999999998888874 57999999999 9999985
No 460
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=98.55 E-value=2.1e-07 Score=88.74 Aligned_cols=80 Identities=13% Similarity=0.194 Sum_probs=59.9
Q ss_pred HHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhCC
Q 004388 35 KQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICVP 114 (757)
Q Consensus 35 ~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap 114 (757)
.+...++.++.+.. ++.+.|+.+...++...++++.|+++|.++++|.||||+++ +.+ +.+ ++++..|+++|+
T Consensus 59 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~-~~l--gSva~~v~~~a~ 131 (144)
T PRK15118 59 QKRISEETHHALTE---LSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ-DFW-SKL--MSSARQLINTVH 131 (144)
T ss_pred HHHHHHHHHHHHHH---HHHhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCcc-cHH-HHH--HHHHHHHHhhCC
Confidence 33333344444433 44667888766666555999999999999999999999996 333 444 599999999999
Q ss_pred CCceEEEEe
Q 004388 115 SFCTVYGVE 123 (757)
Q Consensus 115 ~~C~V~vv~ 123 (757)
|+|+||.
T Consensus 132 --~pVLvv~ 138 (144)
T PRK15118 132 --VDMLIVP 138 (144)
T ss_pred --CCEEEec
Confidence 9999986
No 461
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=98.53 E-value=4.5e-07 Score=84.30 Aligned_cols=70 Identities=24% Similarity=0.285 Sum_probs=62.5
Q ss_pred HHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCceEEEEe
Q 004388 51 NMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFCTVYGVE 123 (757)
Q Consensus 51 ~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C~V~vv~ 123 (757)
..+...+......++...+++++|++++.++++|.||||+++++.+.+.+ .++++..+++++| |+|+||.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~-~gs~~~~l~~~~~--~pVlvv~ 140 (140)
T PF00582_consen 71 EEAEAEGGIVIEVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLL-FGSVAEKLLRHAP--CPVLVVP 140 (140)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSS-SHHHHHHHHHHTS--SEEEEEE
T ss_pred HHHhhhccceeEEEEEeeccchhhhhccccccceeEEEeccCCCCccCCC-cCCHHHHHHHcCC--CCEEEeC
Confidence 66777777777788888899999999999999999999999998988866 5899999999999 9999973
No 462
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=98.51 E-value=6.5e-07 Score=82.29 Aligned_cols=84 Identities=24% Similarity=0.330 Sum_probs=72.2
Q ss_pred HHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhCC
Q 004388 35 KQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICVP 114 (757)
Q Consensus 35 ~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap 114 (757)
......+.++.|.+|...|...|+.+...+..++ ++++|++++.++++|.||||+.+.+.+.+.+ .++.+..+++.++
T Consensus 47 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~dlvvig~~~~~~~~~~~-~~~~~~~ll~~~~ 124 (130)
T cd00293 47 AELLEEEARALLEALREALAEAGVKVETVVLEGD-PAEAILEAAEELGADLIVMGSRGRSGLRRLL-LGSVAERVLRHAP 124 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCC-CHHHHHHHHHHcCCCEEEEcCCCCCccceee-eccHHHHHHhCCC
Confidence 3445567789999999999889999998888774 5999999999999999999999998887765 4888999999988
Q ss_pred CCceEEEE
Q 004388 115 SFCTVYGV 122 (757)
Q Consensus 115 ~~C~V~vv 122 (757)
|+|++|
T Consensus 125 --~pvliv 130 (130)
T cd00293 125 --CPVLVV 130 (130)
T ss_pred --CCEEeC
Confidence 999875
No 463
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.48 E-value=4.8e-08 Score=111.08 Aligned_cols=150 Identities=23% Similarity=0.323 Sum_probs=104.4
Q ss_pred HHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccc---cCCcccccCCCcccccc
Q 004388 506 WEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKN---TGPVGTLCYIDPEYQRT 582 (757)
Q Consensus 506 ~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~---~~~~gt~~Y~aPE~~~~ 582 (757)
.+++.||.|+|..- .+||++|.|++|.++.++..||+.|+++-.......+.-..|.. ........|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34559999999865 49999999999999999999999999986655422221111111 11245678999999998
Q ss_pred CCCCCcchhhhHHHHHHHHH-hCCCCccccchh-hhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCcc
Q 004388 583 GLISPKSDVYAYGMVILQLL-TAKPAIAITHKV-ETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDL 660 (757)
Q Consensus 583 ~~~s~ksDvwSlGvil~ell-tG~~Pf~~~~~~-~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~ 660 (757)
...++++|+|||||++|.+. .|++-+...... ...... ...+..........+.++.+=+.+.+..++.-||++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~----~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR----NLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh----cccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 88999999999999999999 566554322111 111110 011112223345667888999999999999999965
Q ss_pred c
Q 004388 661 K 661 (757)
Q Consensus 661 ~ 661 (757)
.
T Consensus 260 ~ 260 (700)
T KOG2137|consen 260 D 260 (700)
T ss_pred h
Confidence 4
No 464
>PRK11175 universal stress protein UspE; Provisional
Probab=98.46 E-value=8.6e-07 Score=95.52 Aligned_cols=90 Identities=16% Similarity=0.111 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhh
Q 004388 33 AYKQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISIC 112 (757)
Q Consensus 33 ~~~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ 112 (757)
..++...++.++.+..+...+.+.|++++..++...+++++|++++.++++|.||||+.+.+.+.+.+. ++++..+++.
T Consensus 58 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~-gs~~~~l~~~ 136 (305)
T PRK11175 58 AMRQGVISQRTAWIREQAKPYLDAGIPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIF-TPTDWHLLRK 136 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhcc-ChhHHHHHhc
Confidence 333444445667788888888888999999888666999999999999999999999999988888774 7899999999
Q ss_pred CCCCceEEEEecC
Q 004388 113 VPSFCTVYGVEKG 125 (757)
Q Consensus 113 ap~~C~V~vv~kg 125 (757)
+| |+|+||..+
T Consensus 137 ~~--~pvlvv~~~ 147 (305)
T PRK11175 137 CP--CPVLMVKDQ 147 (305)
T ss_pred CC--CCEEEeccc
Confidence 99 999999764
No 465
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.43 E-value=9.4e-07 Score=89.87 Aligned_cols=105 Identities=21% Similarity=0.220 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHHhcCCCc--eeeeccccc------CCceEEEEecCCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 004388 442 NKQFLQELEVLSKIRHPH--LLLLLGACP------DHGCLVYEYMENG-SLEDRLYRKNNTPPIPWFERYRIAWEVASAL 512 (757)
Q Consensus 442 ~~~f~~Ev~il~~l~Hpn--iv~l~g~~~------~~~~LV~Ey~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL 512 (757)
.....+|...+.+|..-. +...+++.. ...+||+|++++. +|.+++..... ++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 445778888887774222 222333322 1237999999984 79998865332 44456778999999999
Q ss_pred HHHhhCCCCCEEEcCCCCCCeeecCCC---ceEEeeecCcccc
Q 004388 513 AFLHNTKPKPIIHRDMKPGNILLDHNL---VSKIGDVGLSTML 552 (757)
Q Consensus 513 ~~LH~~~~~~ivHrDLKp~NILld~~~---~~KL~DFGla~~~ 552 (757)
.-||..+ |+|+|++|.|||++.++ .+.|+||+.++..
T Consensus 132 ~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 132 AKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999998 99999999999998887 8999999988753
No 466
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.42 E-value=4.3e-06 Score=83.63 Aligned_cols=106 Identities=23% Similarity=0.238 Sum_probs=85.3
Q ss_pred HHHHHHHHhcCC-CceeeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEE
Q 004388 446 LQELEVLSKIRH-PHLLLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPII 524 (757)
Q Consensus 446 ~~Ev~il~~l~H-pniv~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iv 524 (757)
..|.-+|..+.+ +++++++|+|.. ++|.||+..+++......-......+|..|.+||.+++..+.+|+......+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~ 84 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY 84 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 358888888876 699999999944 78999998777653210001112368999999999999999999997766799
Q ss_pred EcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 525 HRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 525 HrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
-.|++|+|+-++++|.+|++|...+....
T Consensus 85 lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 85 LCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred EeecchHHeEEeCCCcEEEEechhcchhH
Confidence 99999999999999999999999876554
No 467
>PRK11175 universal stress protein UspE; Provisional
Probab=98.40 E-value=1.3e-06 Score=94.24 Aligned_cols=84 Identities=12% Similarity=0.199 Sum_probs=64.9
Q ss_pred HHHHHHHHHhHhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhC
Q 004388 34 YKQEEKWKTDRLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICV 113 (757)
Q Consensus 34 ~~~~~~~~~~~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~a 113 (757)
|....+.+..+.+..+. ...|+..+..++...+++++|++++.++++|.||||+.+++.+.+.|. |+++..|+..+
T Consensus 216 ~~~~~~~~~~~~l~~~~---~~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~ll-GS~a~~v~~~~ 291 (305)
T PRK11175 216 YNDAIRGQHLLAMKALR---QKFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAAFL-GNTAEHVIDHL 291 (305)
T ss_pred HHHHHHHHHHHHHHHHH---HHhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcceee-cchHHHHHhcC
Confidence 44443444444444443 444676654455555899999999999999999999999999998775 89999999999
Q ss_pred CCCceEEEEe
Q 004388 114 PSFCTVYGVE 123 (757)
Q Consensus 114 p~~C~V~vv~ 123 (757)
| |+|+||.
T Consensus 292 ~--~pVLvv~ 299 (305)
T PRK11175 292 N--CDLLAIK 299 (305)
T ss_pred C--CCEEEEc
Confidence 9 9999985
No 468
>PRK09902 hypothetical protein; Provisional
Probab=98.39 E-value=5.5e-06 Score=83.48 Aligned_cols=136 Identities=16% Similarity=0.058 Sum_probs=102.0
Q ss_pred eccCCcEEEEEEEECCeEEEEEEEccC------CchhhHHHHHHHHHHHhcCCC--ceeeeccccc---CC----ceEEE
Q 004388 411 IGMGGYGTVYKGTFHHTFAAVKVLQSK------GNIQNKQFLQELEVLSKIRHP--HLLLLLGACP---DH----GCLVY 475 (757)
Q Consensus 411 IG~G~~G~Vyk~~~~~~~vAvK~l~~~------~~~~~~~f~~Ev~il~~l~Hp--niv~l~g~~~---~~----~~LV~ 475 (757)
-|+||.+.|++..+.+..+=+|.-... .......|.+|...|.+|..- ++...+ ++. .. .+||+
T Consensus 26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 478999999999888877878865421 133567799999999998532 233433 332 11 37999
Q ss_pred EecCC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCc--eEEeeecCccc
Q 004388 476 EYMEN-GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLV--SKIGDVGLSTM 551 (757)
Q Consensus 476 Ey~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~--~KL~DFGla~~ 551 (757)
|-++| -+|.+++.... ..+.+...+..++.+|+..+.-||..+ +.|+|+.+.|||++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98864 48888875433 234566777899999999999999998 999999999999986666 89999987654
No 469
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.38 E-value=1.7e-06 Score=98.73 Aligned_cols=138 Identities=20% Similarity=0.225 Sum_probs=91.4
Q ss_pred eeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhh------------------------------H----------HHHH
Q 004388 409 LRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQN------------------------------K----------QFLQ 447 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~------------------------------~----------~f~~ 447 (757)
..|+.++-|.||+|++. |..||||+.++.-.... + +|.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 46999999999999998 78999999876532111 0 1345
Q ss_pred HHHHHHhcC-----CCcee--eecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhhCC
Q 004388 448 ELEVLSKIR-----HPHLL--LLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASAL-AFLHNTK 519 (757)
Q Consensus 448 Ev~il~~l~-----Hpniv--~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL-~~LH~~~ 519 (757)
|..-+.+++ .|++. ..+--+.....|+|||++|..+.+....... .++ +..|+..++.+. .-+-..|
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d---~k~ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GID---RKELAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCC---HHHHHHHHHHHHHHHHHhcC
Confidence 555555552 23321 2222233455899999999999887433222 233 233444444332 2222234
Q ss_pred CCCEEEcCCCCCCeeecCCCceEEeeecCccccCC
Q 004388 520 PKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 520 ~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~ 554 (757)
++|+|..|.||+++.+|.+-+.|||+...+++
T Consensus 286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999877654
No 470
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.30 E-value=4e-06 Score=86.51 Aligned_cols=134 Identities=18% Similarity=0.097 Sum_probs=90.3
Q ss_pred CccceeeccCCcEEEEEEEEC-CeEEEEEEEccCCch----------------------hhHHHHHHHHHHHhcCCC--c
Q 004388 405 FSENLRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNI----------------------QNKQFLQELEVLSKIRHP--H 459 (757)
Q Consensus 405 f~~~~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~----------------------~~~~f~~Ev~il~~l~Hp--n 459 (757)
.....+||-|--+.||.|... +..+|||.-+..... .+....+|.++|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345578999999999999986 789999986532111 112346799999888533 3
Q ss_pred eeeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCC
Q 004388 460 LLLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNL 539 (757)
Q Consensus 460 iv~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~ 539 (757)
+..-+++ +..++||||++|-.|...-. .-...-.|+..|+.-+.-+-..| |||||+.+-|||++.+|
T Consensus 173 VP~P~~~--nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW--NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc--ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCC
Confidence 3333322 33479999999866654211 11222334445555444444555 99999999999999999
Q ss_pred ceEEeeecCccc
Q 004388 540 VSKIGDVGLSTM 551 (757)
Q Consensus 540 ~~KL~DFGla~~ 551 (757)
.+.++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999976544
No 471
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.29 E-value=4.2e-06 Score=85.53 Aligned_cols=141 Identities=22% Similarity=0.232 Sum_probs=84.6
Q ss_pred eeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCC--ceeeeccccc---C--CceEEEEecCCC
Q 004388 409 LRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHP--HLLLLLGACP---D--HGCLVYEYMENG 481 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hp--niv~l~g~~~---~--~~~LV~Ey~~~g 481 (757)
..|+.|..+.||+....+..+++|+.... .....+.+|+.++..+... .+..++.++. . ..+++|+|++|.
T Consensus 3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 56899999999999998889999997654 4456678899998888522 3445555331 1 137899999998
Q ss_pred CHHH----------------HH---hhc-CCCCCCCHHHHH---------HH------------HHHHHH-HHHHHhh--
Q 004388 482 SLED----------------RL---YRK-NNTPPIPWFERY---------RI------------AWEVAS-ALAFLHN-- 517 (757)
Q Consensus 482 sL~~----------------~L---~~~-~~~~~l~~~~~~---------~i------------~~qia~-aL~~LH~-- 517 (757)
.+.. .| +.. ....++.+.... .. ...+.. .+..++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 8777 11 111 111122221110 00 011222 3334443
Q ss_pred --CCCCCEEEcCCCCCCeeec-CCCceEEeeecCccc
Q 004388 518 --TKPKPIIHRDMKPGNILLD-HNLVSKIGDVGLSTM 551 (757)
Q Consensus 518 --~~~~~ivHrDLKp~NILld-~~~~~KL~DFGla~~ 551 (757)
..+..++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2345699999999999999 667668999988753
No 472
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.27 E-value=8.2e-06 Score=84.19 Aligned_cols=136 Identities=17% Similarity=0.179 Sum_probs=78.7
Q ss_pred eeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCc--eeeecccccC--CceEEEEecCCCC-H
Q 004388 409 LRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPH--LLLLLGACPD--HGCLVYEYMENGS-L 483 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpn--iv~l~g~~~~--~~~LV~Ey~~~gs-L 483 (757)
..||.|..+.||+.. +..+++|...... ......+|.+++..+..-. +.+.++++.+ ...+|||+++|.. +
T Consensus 7 ~~i~~G~t~~~y~~~--~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTHK--TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEec--CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 469999999999842 4456788876533 3345688999998875322 2344544432 3368999999863 2
Q ss_pred HHH---------------------HhhcCCCCCCCHHHHHH-HHH----------HHHH-HHHHHhhC-CCCCEEEcCCC
Q 004388 484 EDR---------------------LYRKNNTPPIPWFERYR-IAW----------EVAS-ALAFLHNT-KPKPIIHRDMK 529 (757)
Q Consensus 484 ~~~---------------------L~~~~~~~~l~~~~~~~-i~~----------qia~-aL~~LH~~-~~~~ivHrDLK 529 (757)
... |+... ....+...... +.. .+.. ...+|... .+..++|+|+.
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTK-CDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCC-CCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 111 11100 01111111100 000 0111 12222221 12457999999
Q ss_pred CCCeeecCCCceEEeeecCcc
Q 004388 530 PGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 530 p~NILld~~~~~KL~DFGla~ 550 (757)
|.||+++.++ +.|+||+.+.
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCcEEEcCCC-cEEEechhcC
Confidence 9999999888 9999999875
No 473
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=98.19 E-value=1.2e-05 Score=76.59 Aligned_cols=87 Identities=18% Similarity=0.318 Sum_probs=75.7
Q ss_pred HHHHHHHHhHhhHHHHHHhhhcCcee-eEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhC
Q 004388 35 KQEEKWKTDRLLLPFRNMCAQRRVEV-EVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICV 113 (757)
Q Consensus 35 ~~~~~~~~~~ll~~~~~~c~~~~v~~-~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~a 113 (757)
.........+.+........+.|+.. +..+.+++.....|++++.++++|.||||+.+++.+.+.+ .++++..|+.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~~l-lGsvs~~v~~~~ 143 (154)
T COG0589 65 EEELEEEAEELLAEAKALAEAAGVPVVETEVVEGSPSAEEILELAEEEDADLIVVGSRGRSGLSRLL-LGSVAEKVLRHA 143 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeEEEEecCCCcHHHHHHHHHHhCCCEEEECCCCCcccccee-eehhHHHHHhcC
Confidence 34456677889999999999999984 8888888666999999999999999999999999998844 589999999999
Q ss_pred CCCceEEEEec
Q 004388 114 PSFCTVYGVEK 124 (757)
Q Consensus 114 p~~C~V~vv~k 124 (757)
+ |+|++|..
T Consensus 144 ~--~pVlvv~~ 152 (154)
T COG0589 144 P--CPVLVVRS 152 (154)
T ss_pred C--CCEEEEcc
Confidence 9 99998763
No 474
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.17 E-value=9.1e-06 Score=82.25 Aligned_cols=135 Identities=21% Similarity=0.148 Sum_probs=90.7
Q ss_pred hcCCccceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHH---------HHHHHHHHhcCCC---ceeeecccc--
Q 004388 402 TLSFSENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQF---------LQELEVLSKIRHP---HLLLLLGAC-- 467 (757)
Q Consensus 402 t~~f~~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f---------~~Ev~il~~l~Hp---niv~l~g~~-- 467 (757)
.++|...+.+-......|.+-..++..+.+|..+.........| .+.+..+.+++.. ....++-+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ek 109 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEK 109 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeee
Confidence 44566667777777788888888999999999877654333322 2344444444321 112212111
Q ss_pred -----cCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceE
Q 004388 468 -----PDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSK 542 (757)
Q Consensus 468 -----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~K 542 (757)
....+|+|||++|..|.+... ++. .++..|..++.-||..| ++|+|..|.|++++.++ ++
T Consensus 110 k~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~ 174 (229)
T PF06176_consen 110 KIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IR 174 (229)
T ss_pred eeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EE
Confidence 122358999999988866431 221 34567788899999998 99999999999999665 88
Q ss_pred EeeecCccc
Q 004388 543 IGDVGLSTM 551 (757)
Q Consensus 543 L~DFGla~~ 551 (757)
++||+..+.
T Consensus 175 iID~~~k~~ 183 (229)
T PF06176_consen 175 IIDTQGKRM 183 (229)
T ss_pred EEECccccc
Confidence 999987653
No 475
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.12 E-value=1.2e-05 Score=91.67 Aligned_cols=139 Identities=18% Similarity=0.144 Sum_probs=91.1
Q ss_pred eeeccCCcEEEEEEEEC-CeEEEEEEEccCCchhh-------------------------------------HHHHHHHH
Q 004388 409 LRIGMGGYGTVYKGTFH-HTFAAVKVLQSKGNIQN-------------------------------------KQFLQELE 450 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~-~~~vAvK~l~~~~~~~~-------------------------------------~~f~~Ev~ 450 (757)
..||.-+.|.||+++.+ |..||||+-++.-.... -+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 45899999999999986 56899999776532110 02455555
Q ss_pred HHHhc----CCCc------eeeecccccCCceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 004388 451 VLSKI----RHPH------LLLLLGACPDHGCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKP 520 (757)
Q Consensus 451 il~~l----~Hpn------iv~l~g~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~ 520 (757)
-..++ .|-+ |.++|-.+.....|+||||+|..+.|.-.-... .++-.....-+.++..-.-+.|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~l~~~~~~qIf~~---- 320 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNKLVEAYLEQIFKT---- 320 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHHHHHHHHHHHHhc----
Confidence 44443 3555 445555556667999999999887775432222 1443433333333322222322
Q ss_pred CCEEEcCCCCCCeeec----CCCceEEeeecCccccCC
Q 004388 521 KPIIHRDMKPGNILLD----HNLVSKIGDVGLSTMLNS 554 (757)
Q Consensus 521 ~~ivHrDLKp~NILld----~~~~~KL~DFGla~~~~~ 554 (757)
+++|+|=.|.||++. .++.+.+-|||+...+..
T Consensus 321 -GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 321 -GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred -CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 399999999999998 367899999999887654
No 476
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.10 E-value=2.2e-05 Score=81.75 Aligned_cols=137 Identities=18% Similarity=0.075 Sum_probs=82.2
Q ss_pred eccCCc-EEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcC-CCceeeecccccC--CceEEEEecCCCCHHHH
Q 004388 411 IGMGGY-GTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIR-HPHLLLLLGACPD--HGCLVYEYMENGSLEDR 486 (757)
Q Consensus 411 IG~G~~-G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-Hpniv~l~g~~~~--~~~LV~Ey~~~gsL~~~ 486 (757)
|-.|.+ ..||+....+..+.||+..... ...+.+|+.++..+. +--+.++++++.. ..++||||++|.+|...
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 445555 7899998777778888876543 334678999988874 3334566666544 35899999999877643
Q ss_pred H-------------------hhcCC-CCCCCH--HHHHHHHH--------------------HHHHHHHHHhh----CCC
Q 004388 487 L-------------------YRKNN-TPPIPW--FERYRIAW--------------------EVASALAFLHN----TKP 520 (757)
Q Consensus 487 L-------------------~~~~~-~~~l~~--~~~~~i~~--------------------qia~aL~~LH~----~~~ 520 (757)
. +.... ..++.. ........ .+...+..|-. ..+
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 2 11100 001110 00010000 01111222211 122
Q ss_pred CCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 521 KPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 521 ~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
..++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 459999999999999998888999998775
No 477
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=3.2e-06 Score=84.70 Aligned_cols=71 Identities=35% Similarity=0.559 Sum_probs=66.3
Q ss_pred CCCCCCCccCccchhcccCCcccCCCcccchHHHHHHHHh-CCCCCCCCCCCCCCCCCchHHHHHHHHHHhh
Q 004388 686 HPAPPNHFICPILKEVMNEPCVAADGYTYDRKAIEEWLQE-NDKSPITDLPLPNKNLLPNYTLLSAILDWKS 756 (757)
Q Consensus 686 ~~~~p~~ficPi~~evM~dp~iaadG~tye~~aIe~wl~~-~~~sP~t~~~l~~~~l~pn~~l~~~~~~w~~ 756 (757)
....|...-|-|..++|++|++..-|.||++..|+..|+. +..+|+|+.+|..-.++||++|+.+|..++.
T Consensus 205 ~rEvpd~lcgkIt~el~~~pvi~psgIty~ra~I~Ehl~rvghfdpvtr~~Lte~q~ipN~alkevIa~fl~ 276 (284)
T KOG4642|consen 205 KREVPDYLCGKITLELMREPVITPSGITYDRADIEEHLQRVGHFDPVTRWPLTEYQLIPNLALKEVIAAFLK 276 (284)
T ss_pred cccccchhhhhhhHHhhcCCccCccccchhHHHHHHHHHHhccCCchhcccCCHHhhccchHHHHHHHHHHH
Confidence 3477888889999999999999999999999999999998 9999999999999999999999999988764
No 478
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.01 E-value=3.7e-05 Score=79.70 Aligned_cols=138 Identities=20% Similarity=0.215 Sum_probs=75.6
Q ss_pred eeeccCCcE-EEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCC---ceeeecccccC-----CceEEEEecC
Q 004388 409 LRIGMGGYG-TVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHP---HLLLLLGACPD-----HGCLVYEYME 479 (757)
Q Consensus 409 ~~IG~G~~G-~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hp---niv~l~g~~~~-----~~~LV~Ey~~ 479 (757)
..|+.||.. .||+. +..+.+|+.... .....+.+|.++|..+... .+...++.+.. ..+++|++++
T Consensus 3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 457877776 49975 235677775442 2345688899999877521 23333433322 2378999999
Q ss_pred CCCHHHH------------------HhhcCCC-CCC-------------CHHHHH--HHH-------HHHHHH-HH-HHh
Q 004388 480 NGSLEDR------------------LYRKNNT-PPI-------------PWFERY--RIA-------WEVASA-LA-FLH 516 (757)
Q Consensus 480 ~gsL~~~------------------L~~~~~~-~~l-------------~~~~~~--~i~-------~qia~a-L~-~LH 516 (757)
|.++.+. |+..... .+. .|.... .+. .+.+.. +. +++
T Consensus 78 G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 157 (235)
T cd05155 78 GETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAALR 157 (235)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHhc
Confidence 8766321 1111100 000 011110 000 011111 11 111
Q ss_pred h--CCCCCEEEcCCCCCCeeecCCCceEEeeecCccc
Q 004388 517 N--TKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 517 ~--~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~ 551 (757)
. ..+..++|+|+.|.|||++.++..-|+||+.+..
T Consensus 158 ~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 158 APWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 1 1334599999999999999877778999998753
No 479
>PLN02876 acyl-CoA dehydrogenase
Probab=97.95 E-value=8.1e-05 Score=91.14 Aligned_cols=146 Identities=19% Similarity=0.223 Sum_probs=91.3
Q ss_pred ceeeccCCcEEEEEEEECC----eEEEEEEEccCCc-hhhHHHHHHHHHHHhcC-CCce--eeecccccCC-----ceEE
Q 004388 408 NLRIGMGGYGTVYKGTFHH----TFAAVKVLQSKGN-IQNKQFLQELEVLSKIR-HPHL--LLLLGACPDH-----GCLV 474 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~----~~vAvK~l~~~~~-~~~~~f~~Ev~il~~l~-Hpni--v~l~g~~~~~-----~~LV 474 (757)
...|+.|.++.+|+....+ ..+++|+...... .....+.+|+.+|+.+. |+++ .+.+++|.+. .|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 4568999999999987754 3567776544321 23356889999999995 6665 7778887653 4899
Q ss_pred EEecCCCCHHH--------------------H---HhhcCC--------CCCCCHHH--HHHHH---------------H
Q 004388 475 YEYMENGSLED--------------------R---LYRKNN--------TPPIPWFE--RYRIA---------------W 506 (757)
Q Consensus 475 ~Ey~~~gsL~~--------------------~---L~~~~~--------~~~l~~~~--~~~i~---------------~ 506 (757)
|||++|..+.+ . |+.... ..+..+.. ...+. -
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 99999864321 1 111110 01111111 11111 1
Q ss_pred HHHHHHHHHhhCCCC--------CEEEcCCCCCCeeecC--CCceEEeeecCccccC
Q 004388 507 EVASALAFLHNTKPK--------PIIHRDMKPGNILLDH--NLVSKIGDVGLSTMLN 553 (757)
Q Consensus 507 qia~aL~~LH~~~~~--------~ivHrDLKp~NILld~--~~~~KL~DFGla~~~~ 553 (757)
.+...+.+|..+-|. .+||+|++|.|||++. +..+-|.||+++..-+
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 233446677554442 4999999999999975 2346799999987644
No 480
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.85 E-value=5.5e-05 Score=79.45 Aligned_cols=139 Identities=12% Similarity=0.035 Sum_probs=80.5
Q ss_pred eeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCce-eeecccccCCceEEEEecCCCCHHH---
Q 004388 410 RIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHL-LLLLGACPDHGCLVYEYMENGSLED--- 485 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpni-v~l~g~~~~~~~LV~Ey~~~gsL~~--- 485 (757)
.+..|-.+.+|+....+..+++|+.........-...+|..+++.+..-.+ ..+++.+ ..++||||++|..+..
T Consensus 3 ~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~~~~v~e~i~G~~~~~~~~ 80 (256)
T TIGR02721 3 TLSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--EHWLLVEWLEGEVITLDQF 80 (256)
T ss_pred cCCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--CCEEEEEeccCcccccccc
Confidence 356788889999987777888887654322211135679999988853222 2333333 3579999999866531
Q ss_pred -----------H---HhhcC-CCCCCCHHHHH-HHHHH---------HHHHHHHHhhC-----CCCCEEEcCCCCCCeee
Q 004388 486 -----------R---LYRKN-NTPPIPWFERY-RIAWE---------VASALAFLHNT-----KPKPIIHRDMKPGNILL 535 (757)
Q Consensus 486 -----------~---L~~~~-~~~~l~~~~~~-~i~~q---------ia~aL~~LH~~-----~~~~ivHrDLKp~NILl 535 (757)
. |+... ...+++..... .+..+ +...+..+-.. .+..++|+|+.|.|||+
T Consensus 81 ~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~ 160 (256)
T TIGR02721 81 VALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVV 160 (256)
T ss_pred cCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEE
Confidence 1 11111 11122222211 11111 11112222211 12358999999999999
Q ss_pred cCCCceEEeeecCccc
Q 004388 536 DHNLVSKIGDVGLSTM 551 (757)
Q Consensus 536 d~~~~~KL~DFGla~~ 551 (757)
+.++ +.|+||+.|..
T Consensus 161 ~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 161 TPQG-LKLIDWEYASD 175 (256)
T ss_pred eCCC-CEEEeccccCc
Confidence 9887 78999998753
No 481
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.82 E-value=0.00013 Score=74.81 Aligned_cols=134 Identities=20% Similarity=0.241 Sum_probs=83.9
Q ss_pred eeccCCcEEEEEEEE-CCeEEEEEEEccCCchhh---------HH---------------HHHHHHHHHhcCCCc--eee
Q 004388 410 RIGMGGYGTVYKGTF-HHTFAAVKVLQSKGNIQN---------KQ---------------FLQELEVLSKIRHPH--LLL 462 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~-~~~~vAvK~l~~~~~~~~---------~~---------------f~~Ev~il~~l~Hpn--iv~ 462 (757)
.|+.|--+.||+|.. ++..+|||+......... .. ...|+.-|.++..-+ +.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 466777889999876 477999999865422111 01 134555555542111 111
Q ss_pred ecccccCCceEEEEecCCCCH-HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCEEEcCCCCCCeeecCCCc
Q 004388 463 LLGACPDHGCLVYEYMENGSL-EDRLYRKNNTPPIPWFERYRIAWEVASALAFLHN-TKPKPIIHRDMKPGNILLDHNLV 540 (757)
Q Consensus 463 l~g~~~~~~~LV~Ey~~~gsL-~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~ivHrDLKp~NILld~~~~ 540 (757)
=++ .....|||||+....+ .-.|.. .++.......+..+++..+.-|-. .+ +||+||..-|||+. ++.
T Consensus 135 Pi~--~~~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~~a~---LVHgDLSEyNiL~~-~~~ 204 (268)
T COG1718 135 PIA--FRNNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYKEAG---LVHGDLSEYNILVH-DGE 204 (268)
T ss_pred cee--ecCCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHHhcC---cccccchhhheEEE-CCe
Confidence 111 1234799999964311 011111 112222456677788888887777 55 99999999999999 889
Q ss_pred eEEeeecCccccC
Q 004388 541 SKIGDVGLSTMLN 553 (757)
Q Consensus 541 ~KL~DFGla~~~~ 553 (757)
+.|+|||-|-...
T Consensus 205 p~iID~~QaV~~~ 217 (268)
T COG1718 205 PYIIDVSQAVTID 217 (268)
T ss_pred EEEEECccccccC
Confidence 9999999886554
No 482
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.81 E-value=0.0001 Score=71.65 Aligned_cols=128 Identities=16% Similarity=0.153 Sum_probs=88.6
Q ss_pred cceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCceee-ecccccCCceEEEEecCCCCHHH
Q 004388 407 ENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHLLL-LLGACPDHGCLVYEYMENGSLED 485 (757)
Q Consensus 407 ~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpniv~-l~g~~~~~~~LV~Ey~~~gsL~~ 485 (757)
....||+|++|.||+|.+.+..+|+|+-+.++ ....+..|+++|..+.--++-+ +|.+ +..++.|||+.|-.|.+
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y--g~~~i~me~i~G~~L~~ 101 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY--GEDFIRMEYIDGRPLGK 101 (201)
T ss_pred hhhhhhcccccEEEEeeccCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe--chhhhhhhhhcCcchhh
Confidence 34569999999999999999999999977654 3566889999999887555432 2222 23356699999888877
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCC-CCCeeecCCCceEEeeecCccc
Q 004388 486 RLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMK-PGNILLDHNLVSKIGDVGLSTM 551 (757)
Q Consensus 486 ~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLK-p~NILld~~~~~KL~DFGla~~ 551 (757)
.-... . .+-+..++..-.-|...+ |-|+.|. |..++|-.++.+.|+||..|+.
T Consensus 102 ~~~~~------~----rk~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 102 LEIGG------D----RKHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhcc------c----HHHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 54211 1 122334445444455555 8888875 5555555555999999998874
No 483
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.80 E-value=0.0003 Score=78.30 Aligned_cols=74 Identities=15% Similarity=0.029 Sum_probs=55.6
Q ss_pred eeeccCCcEEEEEEEECCe--EEEEEEEccCC-------chhhHHHHHHHHHHHhcC---CCceeeecccccCCceEEEE
Q 004388 409 LRIGMGGYGTVYKGTFHHT--FAAVKVLQSKG-------NIQNKQFLQELEVLSKIR---HPHLLLLLGACPDHGCLVYE 476 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~--~vAvK~l~~~~-------~~~~~~f~~Ev~il~~l~---Hpniv~l~g~~~~~~~LV~E 476 (757)
..||.|.+..||++...+. .+.||.-.+.. ....+++..|.+.|..+. ..++.+++.+..+..++|||
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME 111 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVME 111 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEe
Confidence 4689999999999988653 89999744221 224566778888888763 35677888887777899999
Q ss_pred ecCCCC
Q 004388 477 YMENGS 482 (757)
Q Consensus 477 y~~~gs 482 (757)
|+++..
T Consensus 112 ~L~~~~ 117 (401)
T PRK09550 112 DLSDHK 117 (401)
T ss_pred cCCCcc
Confidence 998743
No 484
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.78 E-value=0.00015 Score=74.84 Aligned_cols=139 Identities=20% Similarity=0.218 Sum_probs=80.5
Q ss_pred eeeccCCcEEEEEEEEC---CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCC-ceeeecccccCCceEEEEecCCCCHH
Q 004388 409 LRIGMGGYGTVYKGTFH---HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHP-HLLLLLGACPDHGCLVYEYMENGSLE 484 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~---~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hp-niv~l~g~~~~~~~LV~Ey~~~gsL~ 484 (757)
..|..|-...+|+.... +..|.+|+........ -...+|+.++..+... -.+++++.+. ..+||||++|.++.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~-~d~~~E~~~~~~l~~~gl~P~v~~~~~--~~~l~e~i~G~~l~ 80 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELI-IDRERELRIHKLLSKHGLAPKLYATFQ--NGLIYEFIPGRTLE 80 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccce-ecHHHHHHHHHHHHhCCCCCeEEEEeC--CcEEEEeeCCCcCC
Confidence 45788888999998876 4678889765432211 1234688888888532 2334444433 35899999987652
Q ss_pred HH-----------------HhhcCCC--------CCCC-HHHHHHHHH----------------------HHH---HHH-
Q 004388 485 DR-----------------LYRKNNT--------PPIP-WFERYRIAW----------------------EVA---SAL- 512 (757)
Q Consensus 485 ~~-----------------L~~~~~~--------~~l~-~~~~~~i~~----------------------qia---~aL- 512 (757)
.. ++..... .... |.....+.. .+. ..|
T Consensus 81 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 160 (235)
T cd05157 81 PEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLK 160 (235)
T ss_pred HHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHH
Confidence 11 1111111 1111 222112111 111 111
Q ss_pred HHHhhC-CCCCEEEcCCCCCCeeecC-CCceEEeeecCcc
Q 004388 513 AFLHNT-KPKPIIHRDMKPGNILLDH-NLVSKIGDVGLST 550 (757)
Q Consensus 513 ~~LH~~-~~~~ivHrDLKp~NILld~-~~~~KL~DFGla~ 550 (757)
..+-.. .+..++|+|+.|.|||++. ++.+.|+||..|.
T Consensus 161 ~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 161 ELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred HHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 112221 2346999999999999998 5789999998775
No 485
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.74 E-value=6.3e-06 Score=93.13 Aligned_cols=178 Identities=17% Similarity=0.161 Sum_probs=123.4
Q ss_pred eeccCCcEEEEEEEECCe-EEEEEEEccCCchhhHHHHHHHHHHHhcCCCc-eeeecccccCCc--eEEEEecCCC-CHH
Q 004388 410 RIGMGGYGTVYKGTFHHT-FAAVKVLQSKGNIQNKQFLQELEVLSKIRHPH-LLLLLGACPDHG--CLVYEYMENG-SLE 484 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~~-~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpn-iv~l~g~~~~~~--~LV~Ey~~~g-sL~ 484 (757)
-+++|+++.+||.+...+ ....++... .....-++++|.+++||| .+..++-+..+. .++++|+.+| +-.
T Consensus 249 ~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~ 323 (829)
T KOG0576|consen 249 NFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSA 323 (829)
T ss_pred HHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccc
Confidence 378999999999765433 122333322 234456899999999999 666666665444 5789998776 221
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCcccccc
Q 004388 485 DRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYK 564 (757)
Q Consensus 485 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~ 564 (757)
+.... ....+.......+...-+.+|++||+.. =+|+| |||... +..|..|||....+.... .
T Consensus 324 ~~~~~--se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-------~ 386 (829)
T KOG0576|consen 324 LEMTV--SEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-------K 386 (829)
T ss_pred ccCCh--hhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc-------c
Confidence 11100 0001222233456667788999999854 48998 777765 678999999987766432 3
Q ss_pred ccCCcccccCCCccccccCCCCCcchhhhHHHHHHHHHhCCCCcc
Q 004388 565 NTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMVILQLLTAKPAIA 609 (757)
Q Consensus 565 ~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvil~elltG~~Pf~ 609 (757)
.....+|+.+++||+...+.+....|+|++|+--.+|--|-+|-.
T Consensus 387 ~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 387 PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 356789999999999999999999999999987778877877654
No 486
>PRK10593 hypothetical protein; Provisional
Probab=97.71 E-value=0.00034 Score=75.29 Aligned_cols=73 Identities=15% Similarity=0.029 Sum_probs=53.1
Q ss_pred eeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCC---Cceeeeccccc-----CCceEEEEecCC
Q 004388 409 LRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRH---PHLLLLLGACP-----DHGCLVYEYMEN 480 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~H---pniv~l~g~~~-----~~~~LV~Ey~~~ 480 (757)
..||.|..+.||+....+..+.+|..+.. .....|..|...|+.|.- -.+.+.+++|. +..+||||+++|
T Consensus 20 ~~i~~G~~~~vy~~~~~~~~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 20 ECISEQPYAALWALYDSQGNPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eecCCccceeEEEEEcCCCCEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 45999999999998765556777775431 123568899999988853 35677777664 235999999998
Q ss_pred CCH
Q 004388 481 GSL 483 (757)
Q Consensus 481 gsL 483 (757)
+++
T Consensus 98 ~~~ 100 (297)
T PRK10593 98 VSV 100 (297)
T ss_pred Eec
Confidence 765
No 487
>PRK05231 homoserine kinase; Provisional
Probab=97.58 E-value=0.00092 Score=72.53 Aligned_cols=158 Identities=16% Similarity=0.235 Sum_probs=84.9
Q ss_pred ccCCCHHHHHHhhcCCcc-----ceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcC-----CCc
Q 004388 390 YRNLTWEEIESATLSFSE-----NLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIR-----HPH 459 (757)
Q Consensus 390 ~~~~~~~ei~~at~~f~~-----~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~-----Hpn 459 (757)
|..++.+++...-..|.. ...|+.|....+|+....+..+++|+.. .. .......|+.++..|. -|.
T Consensus 4 yt~ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~-~~--~~~~l~~~~~~l~~L~~~glpvP~ 80 (319)
T PRK05231 4 YTDVSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQGEYVLTLFE-RL--TAEDLPFFLGLMQHLAARGVPVPA 80 (319)
T ss_pred cccCCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCCcEEEEEec-cC--ChHHhHHHHHHHHHHHHCCCCCCc
Confidence 344455555444344433 2346677778999988776688999876 21 2233444556555552 333
Q ss_pred eeee-----cccccCCceEEEEecCCCCHH-----------HH---HhhcCC--------CCCCCHH-HHHH--------
Q 004388 460 LLLL-----LGACPDHGCLVYEYMENGSLE-----------DR---LYRKNN--------TPPIPWF-ERYR-------- 503 (757)
Q Consensus 460 iv~l-----~g~~~~~~~LV~Ey~~~gsL~-----------~~---L~~~~~--------~~~l~~~-~~~~-------- 503 (757)
++.- +....+..+++++|++|..+. .. |+.... ...+.|. ....
T Consensus 81 ~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (319)
T PRK05231 81 PVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLAD 160 (319)
T ss_pred ceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccCh
Confidence 3321 111123347899999986431 11 111111 0112221 1111
Q ss_pred ----HH-HHHHHHHHHHhhC----CCCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 504 ----IA-WEVASALAFLHNT----KPKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 504 ----i~-~qia~aL~~LH~~----~~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.+ ..+...+..+... -|.++||+|+.|.|||++.+...-|+||+.+.
T Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 161 EQAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred hHHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 11 1111222333311 35679999999999999977667899999875
No 488
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.55 E-value=0.00096 Score=67.25 Aligned_cols=127 Identities=22% Similarity=0.282 Sum_probs=85.8
Q ss_pred cceeeccCCcEEEEEEEECCeEEEEEEEccCC----------------chhhHHHHHHHHHHHhcC------CCceeeec
Q 004388 407 ENLRIGMGGYGTVYKGTFHHTFAAVKVLQSKG----------------NIQNKQFLQELEVLSKIR------HPHLLLLL 464 (757)
Q Consensus 407 ~~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~----------------~~~~~~f~~Ev~il~~l~------Hpniv~l~ 464 (757)
....||.|+.-.||.--. +...+||+..... .....++.+|+.-...+. +.+|.+++
T Consensus 5 ~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 345699999999997432 3467889987665 123455677777666655 88999999
Q ss_pred ccccCCc--eEEEEecCC------CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCEEEcCCCCCCeeec
Q 004388 465 GACPDHG--CLVYEYMEN------GSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTKPKPIIHRDMKPGNILLD 536 (757)
Q Consensus 465 g~~~~~~--~LV~Ey~~~------gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivHrDLKp~NILld 536 (757)
|+..... .+|+|.+.+ -+|.+++.... ++. . +...+-.-..||-..+ |+.+||+|.||++.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~-~---~~~~L~~f~~~l~~~~---Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE-E---LRQALDEFKRYLLDHH---IVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH-H---HHHHHHHHHHHHHHcC---CeecCCCcccEEEE
Confidence 9986544 688888643 36888774432 433 2 2333334445666666 99999999999995
Q ss_pred CC--C--ceEEee
Q 004388 537 HN--L--VSKIGD 545 (757)
Q Consensus 537 ~~--~--~~KL~D 545 (757)
.+ + .+.|+|
T Consensus 153 ~~~~~~~~lvlID 165 (199)
T PF10707_consen 153 RRDSGEFRLVLID 165 (199)
T ss_pred ecCCCceEEEEEe
Confidence 43 2 466766
No 489
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.52 E-value=0.00085 Score=67.34 Aligned_cols=123 Identities=21% Similarity=0.266 Sum_probs=89.6
Q ss_pred cCCccceeeccCCc-EEEEEEEECCeEEEEEEEcc---CCc------------------hhhHHHHHHHHHHHhcC---C
Q 004388 403 LSFSENLRIGMGGY-GTVYKGTFHHTFAAVKVLQS---KGN------------------IQNKQFLQELEVLSKIR---H 457 (757)
Q Consensus 403 ~~f~~~~~IG~G~~-G~Vyk~~~~~~~vAvK~l~~---~~~------------------~~~~~f~~Ev~il~~l~---H 457 (757)
.+++....||.|.- |.||++...+..+|+|++.. ... ....-|..|.....+|. +
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~ 116 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR 116 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence 67888889999999 99999999999999999331 110 11134778888877774 5
Q ss_pred Cce--eeeccccc-C---------------C----ceEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004388 458 PHL--LLLLGACP-D---------------H----GCLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFL 515 (757)
Q Consensus 458 pni--v~l~g~~~-~---------------~----~~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~L 515 (757)
.++ |+.+||.. + . ..||.||++... .+ ...-+.+|.+-|..+
T Consensus 117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~----~~~~~~~~~~dl~~~ 180 (207)
T PF13095_consen 117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PL----QIRDIPQMLRDLKIL 180 (207)
T ss_pred cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------cc----chhHHHHHHHHHHHH
Confidence 566 88888861 0 0 157888887543 11 123456788888999
Q ss_pred hhCCCCCEEEcCCCCCCeeecCCCceEEeeecCc
Q 004388 516 HNTKPKPIIHRDMKPGNILLDHNLVSKIGDVGLS 549 (757)
Q Consensus 516 H~~~~~~ivHrDLKp~NILld~~~~~KL~DFGla 549 (757)
|..+ |+-+|+++.|.. .-||+|||.+
T Consensus 181 ~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 HKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHCC---eeeccCcccccc-----CCEEEecccC
Confidence 9988 999999999975 2489999864
No 490
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.37 E-value=5.5e-05 Score=92.56 Aligned_cols=159 Identities=14% Similarity=0.073 Sum_probs=116.8
Q ss_pred HHHHHHHHHhcCCCceeeecccccCC----ceEEEEecCCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q 004388 445 FLQELEVLSKIRHPHLLLLLGACPDH----GCLVYEYMENGSLEDRLYRKN-NTPPIPWFERYRIAWEVASALAFLHNTK 519 (757)
Q Consensus 445 f~~Ev~il~~l~Hpniv~l~g~~~~~----~~LV~Ey~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~ 519 (757)
...|..-++...|+++...+.-.++. .+.+++|+.+|.+.+.|.+.. ..+++...-+.....+...+..-+|+..
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 34566666677899988776655433 378999999999999887543 3334443333333334356666655432
Q ss_pred --CCCEEEcCCCCCCeeecCCCceEEeeecCccccCCCCCCccccccccCCcccccCCCccccccCCCCCcchhhhHHHH
Q 004388 520 --PKPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISPKSDVYAYGMV 597 (757)
Q Consensus 520 --~~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDvwSlGvi 597 (757)
..--+|++||+.|.+|..+..+|++++|+.+...+..++ .....+++.|+.|++.+.-.++.++|+|..|+-
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf------~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ 1429 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF------FGLELCSPIYVLQLIKNEIKFTKRSDILRRSLS 1429 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchHhh------hhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 234799999999999999999999999999955443322 133478889999999988889999999999999
Q ss_pred HHHHHhCCCCcc
Q 004388 598 ILQLLTAKPAIA 609 (757)
Q Consensus 598 l~elltG~~Pf~ 609 (757)
+|.+--|.++|-
T Consensus 1430 ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1430 LYLRSDGNAYFI 1441 (2724)
T ss_pred HHHHhcccHHHH
Confidence 999998888773
No 491
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.32 E-value=0.001 Score=71.59 Aligned_cols=139 Identities=22% Similarity=0.223 Sum_probs=82.3
Q ss_pred eeeccCCcEEEEEEEECC--------eEEEEEEEccCCchhhHHHHHHHHHHHhcCCCc-eeeecccccCCceEEEEecC
Q 004388 409 LRIGMGGYGTVYKGTFHH--------TFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPH-LLLLLGACPDHGCLVYEYME 479 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~--------~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpn-iv~l~g~~~~~~~LV~Ey~~ 479 (757)
..|..|-...+|+....+ ..+++|+...... ......+|..++..+..-. ..++++++. ..+|+||++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~--~~~v~e~i~ 80 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFP--NGRIEEFIP 80 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeC--CCchhheeC
Confidence 356677778999988653 5788998765432 2234567888888875322 234555554 346899998
Q ss_pred CCCHHHH-----------------HhhcCCCC------CCC--HHHHHH--------------------------HHHHH
Q 004388 480 NGSLEDR-----------------LYRKNNTP------PIP--WFERYR--------------------------IAWEV 508 (757)
Q Consensus 480 ~gsL~~~-----------------L~~~~~~~------~l~--~~~~~~--------------------------i~~qi 508 (757)
|..+... |+...... ..+ |..... +...+
T Consensus 81 G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (302)
T cd05156 81 SRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDE 160 (302)
T ss_pred CCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHH
Confidence 8765421 11111110 111 111111 11122
Q ss_pred HHHHHHHhh------CCCCCEEEcCCCCCCeeecCC----CceEEeeecCcc
Q 004388 509 ASALAFLHN------TKPKPIIHRDMKPGNILLDHN----LVSKIGDVGLST 550 (757)
Q Consensus 509 a~aL~~LH~------~~~~~ivHrDLKp~NILld~~----~~~KL~DFGla~ 550 (757)
...+.+|-. ..+..++|+|+.|.|||++.+ +.+.|+||..|.
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 161 AKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 223344432 234579999999999999874 889999998875
No 492
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.31 E-value=0.0017 Score=69.62 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=85.5
Q ss_pred ceeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCC--ceeeecccc--------cCCceEEEEe
Q 004388 408 NLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHP--HLLLLLGAC--------PDHGCLVYEY 477 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hp--niv~l~g~~--------~~~~~LV~Ey 477 (757)
...|..|....+|+....+..+++|+... .....+..|+.++..+.+- .+.+.+... .+..++|++|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 34577787889999887777899998765 2334566788888877432 244444322 2233689999
Q ss_pred cCCCCHHH--------------HHhhcCC--C------CCCCHHHHHH----------HHHHHHHHHHHHhh----CCCC
Q 004388 478 MENGSLED--------------RLYRKNN--T------PPIPWFERYR----------IAWEVASALAFLHN----TKPK 521 (757)
Q Consensus 478 ~~~gsL~~--------------~L~~~~~--~------~~l~~~~~~~----------i~~qia~aL~~LH~----~~~~ 521 (757)
++|..+.. .|+.... . ....|..... ....+..++.++.. ..+.
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 99866421 1111100 0 1112222110 11123344555553 2345
Q ss_pred CEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 522 PIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 522 ~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
.++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 69999999999999998888999998875
No 493
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.29 E-value=0.0041 Score=67.22 Aligned_cols=140 Identities=15% Similarity=0.188 Sum_probs=81.1
Q ss_pred eeeccCCcEEEEEEEECCeEEEEEEEccCCchhhHHHHHHHHHHHhcCCC--ceeeecccc--------cCCceEEEEec
Q 004388 409 LRIGMGGYGTVYKGTFHHTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHP--HLLLLLGAC--------PDHGCLVYEYM 478 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hp--niv~l~g~~--------~~~~~LV~Ey~ 478 (757)
..++.|....+|+....+..+.+|+..... .......|++++..|..- .+.+.+... .+..+++++|+
T Consensus 28 ~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i 105 (307)
T TIGR00938 28 KGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFL 105 (307)
T ss_pred cccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeC
Confidence 346667678999987766678888875532 233455677777776421 233443322 12237899999
Q ss_pred CCCCHH-----------H---HHhhcCCC--C-------CCCHHHHHH------------HHHHHHHHHHHHhh----CC
Q 004388 479 ENGSLE-----------D---RLYRKNNT--P-------PIPWFERYR------------IAWEVASALAFLHN----TK 519 (757)
Q Consensus 479 ~~gsL~-----------~---~L~~~~~~--~-------~l~~~~~~~------------i~~qia~aL~~LH~----~~ 519 (757)
+|..+. . .++..... . .-.|..... ....+...+.+|.. ..
T Consensus 106 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~ 185 (307)
T TIGR00938 106 QGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDL 185 (307)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 985431 1 11211110 0 011211110 01123334555543 23
Q ss_pred CCCEEEcCCCCCCeeecCCCceEEeeecCcc
Q 004388 520 PKPIIHRDMKPGNILLDHNLVSKIGDVGLST 550 (757)
Q Consensus 520 ~~~ivHrDLKp~NILld~~~~~KL~DFGla~ 550 (757)
+.+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 4679999999999999998878999999874
No 494
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.25 E-value=0.0023 Score=71.05 Aligned_cols=73 Identities=14% Similarity=0.052 Sum_probs=53.7
Q ss_pred ceeeccCCcEEEEEEEECCeEEEEEEEccCCc-------hhhHHHHHHHHHHHhcC---CCceeeecccccCCceEEEEe
Q 004388 408 NLRIGMGGYGTVYKGTFHHTFAAVKVLQSKGN-------IQNKQFLQELEVLSKIR---HPHLLLLLGACPDHGCLVYEY 477 (757)
Q Consensus 408 ~~~IG~G~~G~Vyk~~~~~~~vAvK~l~~~~~-------~~~~~f~~Ev~il~~l~---Hpniv~l~g~~~~~~~LV~Ey 477 (757)
...||.|....||+....+..+.||.-..... ....+-..|.+.|..+. ..++.+++.+|.+..+++|||
T Consensus 37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~ 116 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRY 116 (418)
T ss_pred EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEee
Confidence 45689999999999988777889997542111 12333445677776653 357889999999999999999
Q ss_pred cCC
Q 004388 478 MEN 480 (757)
Q Consensus 478 ~~~ 480 (757)
+++
T Consensus 117 L~~ 119 (418)
T PLN02756 117 LEP 119 (418)
T ss_pred cCC
Confidence 976
No 495
>PLN02236 choline kinase
Probab=97.10 E-value=0.0038 Score=68.70 Aligned_cols=139 Identities=15% Similarity=0.180 Sum_probs=80.3
Q ss_pred eeeccCCcEEEEEEEEC------CeEEEEEEEccCCchhhHHHHHHHHHHHhcCCCce-eeecccccCCceEEEEecCCC
Q 004388 409 LRIGMGGYGTVYKGTFH------HTFAAVKVLQSKGNIQNKQFLQELEVLSKIRHPHL-LLLLGACPDHGCLVYEYMENG 481 (757)
Q Consensus 409 ~~IG~G~~G~Vyk~~~~------~~~vAvK~l~~~~~~~~~~f~~Ev~il~~l~Hpni-v~l~g~~~~~~~LV~Ey~~~g 481 (757)
..|-.|-...+|+.... +..+.+|+.........+ ..+|..++..+..-++ .++++.+... .|++|+++.
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g--~v~efi~g~ 118 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG--RVEEFIHAR 118 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc--eEEEeeCCC
Confidence 35656888899998753 247888887654332222 2578888888753222 3445555433 789999876
Q ss_pred CHHHH-----------------HhhcCC--CC-CCCHHHHHHHHHHH-----------------HHHHHH----Hhh-CC
Q 004388 482 SLEDR-----------------LYRKNN--TP-PIPWFERYRIAWEV-----------------ASALAF----LHN-TK 519 (757)
Q Consensus 482 sL~~~-----------------L~~~~~--~~-~l~~~~~~~i~~qi-----------------a~aL~~----LH~-~~ 519 (757)
+|... ++.... .. +..|.....+..++ ...+.. +.. ..
T Consensus 119 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~ 198 (344)
T PLN02236 119 TLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQ 198 (344)
T ss_pred CCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCC
Confidence 66321 111110 01 12233222332111 111212 222 22
Q ss_pred CCCEEEcCCCCCCeeecC-CCceEEeeecCcc
Q 004388 520 PKPIIHRDMKPGNILLDH-NLVSKIGDVGLST 550 (757)
Q Consensus 520 ~~~ivHrDLKp~NILld~-~~~~KL~DFGla~ 550 (757)
+..++|+|+++.|||+++ ++.+.|+||..|.
T Consensus 199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 346999999999999986 5789999998875
No 496
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.01 E-value=0.0058 Score=65.92 Aligned_cols=139 Identities=18% Similarity=0.265 Sum_probs=79.6
Q ss_pred CCcEEEEEEEECCeEEEEEEEcc--CCchhhHHHHHHHHHHHhcCC--CceeeecccccCCc----eEEEEecCCCCHHH
Q 004388 414 GGYGTVYKGTFHHTFAAVKVLQS--KGNIQNKQFLQELEVLSKIRH--PHLLLLLGACPDHG----CLVYEYMENGSLED 485 (757)
Q Consensus 414 G~~G~Vyk~~~~~~~vAvK~l~~--~~~~~~~~f~~Ev~il~~l~H--pniv~l~g~~~~~~----~LV~Ey~~~gsL~~ 485 (757)
|..-.+|.....+..+++. ... ..........+|+.+|+.+.- --+...++.|.+.. +.||+|++|..+.+
T Consensus 36 G~sn~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~ 114 (321)
T COG3173 36 GWSNDTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWS 114 (321)
T ss_pred CcccceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccC
Confidence 3334455555556677777 332 122233455678888887742 33456677886665 89999999832221
Q ss_pred ------------------HHhh---cC--CCC-----------C-CCHHHHHHHHH--------HHHHHHHHHhhCCC--
Q 004388 486 ------------------RLYR---KN--NTP-----------P-IPWFERYRIAW--------EVASALAFLHNTKP-- 520 (757)
Q Consensus 486 ------------------~L~~---~~--~~~-----------~-l~~~~~~~i~~--------qia~aL~~LH~~~~-- 520 (757)
.|.. -. ..+ + -.|...++.+. ....-..||+.+-|
T Consensus 115 ~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~ 194 (321)
T COG3173 115 ALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPW 194 (321)
T ss_pred cCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCc
Confidence 1110 00 000 0 01111111110 12223445554433
Q ss_pred ---CCEEEcCCCCCCeeecCCCceEEeeecCccccC
Q 004388 521 ---KPIIHRDMKPGNILLDHNLVSKIGDVGLSTMLN 553 (757)
Q Consensus 521 ---~~ivHrDLKp~NILld~~~~~KL~DFGla~~~~ 553 (757)
..++|||+.+.||+++.++-+=|.||+++.+-+
T Consensus 195 ~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 195 AGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred CCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 579999999999999998889999999987543
No 497
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.93 E-value=0.0019 Score=78.26 Aligned_cols=188 Identities=20% Similarity=0.162 Sum_probs=129.2
Q ss_pred HHHHHHHHhcCCCceeeecccccCCc------eEEEEecCCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q 004388 446 LQELEVLSKIRHPHLLLLLGACPDHG------CLVYEYMENGSLEDRLYRKNNTPPIPWFERYRIAWEVASALAFLHNTK 519 (757)
Q Consensus 446 ~~Ev~il~~l~Hpniv~l~g~~~~~~------~LV~Ey~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~ 519 (757)
.-|...+.++.|+|++.+++|..+.. .+..+|+..-++...+...+ .++..+...+..++..||.|+|...
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---SIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---ccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 34677788889999999998865433 23457888888888776544 3777788888999999999999975
Q ss_pred CCCEEEcCCCCC---CeeecCCCceEEe--eecCccccCCCCCCccccccccCCcccccCCCccccccCCCCC--cchhh
Q 004388 520 PKPIIHRDMKPG---NILLDHNLVSKIG--DVGLSTMLNSDPSFVSTTYKNTGPVGTLCYIDPEYQRTGLISP--KSDVY 592 (757)
Q Consensus 520 ~~~ivHrDLKp~---NILld~~~~~KL~--DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~--ksDvw 592 (757)
..|.-|..+ +...+..+...++ ||+.+..+++.... .....+..|.+||......+.. ..|+|
T Consensus 307 ---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~-------~~~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 307 ---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS-------FSDLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred ---cceeEEecccccccccCccceeecchhhhcccccCCCcccc-------hhhcCccccccccccccccchhhhhhHHH
Confidence 555555444 4455666777777 99988776654321 2234566678888665554444 47999
Q ss_pred hHHHHHHHHHhCCCCccccchhhhhhchhhHHHHhhhhcCCCChhHHHHHHHHHHHHhhccCCCCCccch
Q 004388 593 AYGMVILQLLTAKPAIAITHKVETAIDEDNLAEILDAQAGDWPIKETKELAALGLSCAELRRKDRPDLKN 662 (757)
Q Consensus 593 SlGvil~elltG~~Pf~~~~~~~~~~~~~~l~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~p~~RPs~~~ 662 (757)
.+|..+..+..|..+-..... ...+++.. ....+.....+|+.-+++.|++..+
T Consensus 377 ~lgll~~~~~~~~~i~~~~~~---------~~~~l~~~-------~~~~~~d~~~~~~~~~~~~Rl~~~~ 430 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKSAV---------PVSLLDVL-------STSELLDALPKCLDEDSEERLSALE 430 (1351)
T ss_pred HHHHHHhhhhhcCcccccccc---------hhhhhccc-------cchhhhhhhhhhcchhhhhccchhh
Confidence 999999999998755322111 11112111 1115677788899999999998875
No 498
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.78 E-value=0.011 Score=64.78 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=50.1
Q ss_pred eeccCCcEEEEEEEECC--eEEEEEEEccC-------CchhhHHHHHHHHHHHhcC--CC-ceeeecccccCCceEEEEe
Q 004388 410 RIGMGGYGTVYKGTFHH--TFAAVKVLQSK-------GNIQNKQFLQELEVLSKIR--HP-HLLLLLGACPDHGCLVYEY 477 (757)
Q Consensus 410 ~IG~G~~G~Vyk~~~~~--~~vAvK~l~~~-------~~~~~~~f~~Ev~il~~l~--Hp-niv~l~g~~~~~~~LV~Ey 477 (757)
.||.|...-||++...+ +.+.||.-.+. .....++..-|.+.|.... -| ++.++|.+-++...+|||+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vMEd 81 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVMED 81 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHhh
Confidence 37999999999998865 47899864321 1333455566888887653 34 4566777767777899999
Q ss_pred cCCC
Q 004388 478 MENG 481 (757)
Q Consensus 478 ~~~g 481 (757)
++..
T Consensus 82 L~~~ 85 (370)
T TIGR01767 82 LSHH 85 (370)
T ss_pred Cccc
Confidence 9653
No 499
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=96.69 E-value=0.0058 Score=67.04 Aligned_cols=52 Identities=15% Similarity=0.280 Sum_probs=42.5
Q ss_pred HHHhHhhHHHHHHhhh------cCceeeEEEeec-------ccHHHHHHHHHHhcCCcEEEeecc
Q 004388 40 WKTDRLLLPFRNMCAQ------RRVEVEVKVIES-------DDVAKAIADEVASCNINKLVIGAQ 91 (757)
Q Consensus 40 ~~~~~ll~~~~~~c~~------~~v~~~~~v~e~-------~~va~~I~~~i~~~~i~~LVmG~~ 91 (757)
...++++......+.+ .||++++.++++ .++++.|++||+++++|.||||-.
T Consensus 58 ~~~eelle~~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~~ 122 (357)
T PRK12652 58 AAAEELLERVEVWATEDLGDDASSVTIETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDPE 122 (357)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCceEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 3445666666666655 599999999874 599999999999999999999975
No 500
>PRK10490 sensor protein KdpD; Provisional
Probab=96.65 E-value=0.0051 Score=76.15 Aligned_cols=75 Identities=16% Similarity=0.286 Sum_probs=62.7
Q ss_pred HhhHHHHHHhhhcCceeeEEEeecccHHHHHHHHHHhcCCcEEEeeccCCCceehhhccCCchhhhhhhCCCCceEEEEe
Q 004388 44 RLLLPFRNMCAQRRVEVEVKVIESDDVAKAIADEVASCNINKLVIGAQSQGIFTWKFKKNNLSSRISICVPSFCTVYGVE 123 (757)
Q Consensus 44 ~ll~~~~~~c~~~~v~~~~~v~e~~~va~~I~~~i~~~~i~~LVmG~~~~~~~~r~~~~~~~~~~v~~~ap~~C~V~vv~ 123 (757)
+-+..++.+|.+-|.+ ++.+.++||+++|++||..++|+.||||.+.++.+ |..+++...+++.+|+ =+|+||.
T Consensus 300 ~~l~~~~~lA~~lGa~--~~~~~~~dva~~i~~~A~~~~vt~IViG~s~~~~~---~~~~s~~~~l~r~~~~-idi~iv~ 373 (895)
T PRK10490 300 RAILSALRLAQELGAE--TATLSDPAEEKAVLRYAREHNLGKIIIGRRASRRW---WRRESFADRLARLGPD-LDLVIVA 373 (895)
T ss_pred HHHHHHHHHHHHcCCE--EEEEeCCCHHHHHHHHHHHhCCCEEEECCCCCCCC---ccCCCHHHHHHHhCCC-CCEEEEe
Confidence 3455666799998876 66788999999999999999999999999998765 4458999999999974 5899986
Q ss_pred c
Q 004388 124 K 124 (757)
Q Consensus 124 k 124 (757)
.
T Consensus 374 ~ 374 (895)
T PRK10490 374 L 374 (895)
T ss_pred C
Confidence 3
Done!