Your job contains 1 sequence.
>004389
MELQNTVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFC
SQTLRSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAED
WGGGGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV
ALSTLTACLHINELKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASV
NVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDEEDVKAIARLFADMG
DSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFGNEA
SAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSLEDLKEFKHTRYDLACCSSSTL
TESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAI
STYVSVVEAEVMPQVMALLPKLPQQPQLLQTVCLTIGAYSKWFDAASSDPSILASVLSIL
TSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHL
VEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYI
FRYVNHPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAI
LEEIQGLYQQHQQPCFLYLSSEVIKVVFPPEVLALIF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004389
(757 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154159 - symbol:MOS14 "AT5G62600" species:370... 1688 5.4e-281 2
UNIPROTKB|Q9Y5L0 - symbol:TNPO3 "Transportin-3" species:9... 372 5.9e-51 2
UNIPROTKB|A5D7C4 - symbol:TNPO3 "TNPO3 protein" species:9... 364 8.6e-51 2
MGI|MGI:1196412 - symbol:Tnpo3 "transportin 3" species:10... 369 3.4e-50 2
RGD|1308938 - symbol:Tnpo3 "transportin 3" species:10116 ... 369 3.5e-50 2
UNIPROTKB|C9J7E5 - symbol:TNPO3 "Uncharacterized protein"... 372 6.8e-49 2
UNIPROTKB|F1SMQ0 - symbol:TNPO3 "Uncharacterized protein"... 372 1.2e-48 2
ZFIN|ZDB-GENE-040426-708 - symbol:tnpo3 "transportin 3" s... 358 1.2e-48 2
FB|FBgn0031456 - symbol:Trn-SR "Transportin-Serine/Argini... 316 1.2e-46 2
CGD|CAL0001884 - symbol:MTR10 species:5476 "Candida albic... 305 3.4e-41 2
UNIPROTKB|E9PFH4 - symbol:TNPO3 "Transportin-3" species:9... 259 1.7e-38 2
POMBASE|SPBC11G11.07 - symbol:mtr10 "karyopherin, nuclear... 307 4.6e-38 2
UNIPROTKB|H9L0A9 - symbol:H9L0A9 "Uncharacterized protein... 294 5.3e-37 2
ZFIN|ZDB-GENE-070706-1 - symbol:ipo13 "importin 13" speci... 286 1.6e-31 3
TAIR|locus:2010381 - symbol:AT1G12930 "AT1G12930" species... 334 1.0e-28 2
UNIPROTKB|F1N8G5 - symbol:IPO13 "Importin-13" species:903... 269 5.3e-28 2
SGD|S000005686 - symbol:MTR10 "Nuclear import receptor" s... 216 1.8e-26 2
UNIPROTKB|Q5ZIC8 - symbol:IPO13 "Importin-13" species:903... 249 8.3e-26 2
UNIPROTKB|F1P2X5 - symbol:IPO13 "Importin-13" species:903... 235 2.6e-24 2
ASPGD|ASPL0000002597 - symbol:kapF species:162425 "Emeric... 195 7.2e-24 2
UNIPROTKB|F1M8G7 - symbol:Ipo13 "Importin-13" species:101... 234 2.5e-23 2
UNIPROTKB|O94829 - symbol:IPO13 "Importin-13" species:960... 275 3.4e-20 1
UNIPROTKB|I3LVG1 - symbol:LOC100624339 "Uncharacterized p... 275 3.4e-20 1
UNIPROTKB|A7YWD2 - symbol:IPO13 "Importin-13" species:991... 274 4.4e-20 1
MGI|MGI:2385205 - symbol:Ipo13 "importin 13" species:1009... 274 4.4e-20 1
UNIPROTKB|E2RK88 - symbol:IPO13 "Uncharacterized protein"... 271 9.3e-20 1
RGD|620071 - symbol:Ipo13 "importin 13" species:10116 "Ra... 270 1.2e-19 1
FB|FBgn0261532 - symbol:cdm "cadmus" species:7227 "Drosop... 171 2.5e-18 3
WB|WBGene00006647 - symbol:tsr-1 species:6239 "Caenorhabd... 139 4.5e-12 3
DICTYBASE|DDB_G0293110 - symbol:ipo13A "importin 13" spec... 180 1.3e-10 2
FB|FBgn0034205 - symbol:CG10950 species:7227 "Drosophila ... 159 2.0e-07 2
DICTYBASE|DDB_G0283745 - symbol:DDB_G0283745 "transportin... 150 1.2e-06 1
TAIR|locus:2097750 - symbol:XPO1B "AT3G03110" species:370... 146 3.5e-06 1
TAIR|locus:2148216 - symbol:XPO1A "AT5G17020" species:370... 142 2.5e-05 2
UNIPROTKB|F1SKB5 - symbol:XPOT "Uncharacterized protein" ... 124 0.00038 1
UNIPROTKB|E1C593 - symbol:XPOT "Uncharacterized protein" ... 126 0.00044 1
UNIPROTKB|J9P2A6 - symbol:XPOT "Uncharacterized protein" ... 123 0.00093 1
>TAIR|locus:2154159 [details] [associations]
symbol:MOS14 "AT5G62600" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=IDA] [GO:0006606 "protein
import into nucleus" evidence=IMP] [GO:0043484 "regulation of RNA
splicing" evidence=IMP] InterPro:IPR001494 InterPro:IPR016024
SMART:SM00913 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005643 GO:GO:0006606 GO:GO:0043484 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 KO:K15436 OMA:TEWTSKH EMBL:BT002408
EMBL:BT010552 EMBL:AK229829 EMBL:AK230415 IPI:IPI00518097
RefSeq:NP_201066.2 UniGene:At.29041 ProteinModelPortal:Q8GUL2
PaxDb:Q8GUL2 PRIDE:Q8GUL2 EnsemblPlants:AT5G62600.1 GeneID:836381
KEGG:ath:AT5G62600 TAIR:At5g62600 HOGENOM:HOG000005921
InParanoid:Q8GUL2 PhylomeDB:Q8GUL2 ProtClustDB:CLSN2681119
ArrayExpress:Q8GUL2 Genevestigator:Q8GUL2 Uniprot:Q8GUL2
Length = 958
Score = 1688 (599.3 bits), Expect = 5.4e-281, Sum P(2) = 5.4e-281
Identities = 328/413 (79%), Positives = 367/413 (88%)
Query: 1 MELQNTVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFC 60
ME QN VKEALNALYHHPDD VR+ ADRWLQ+FQ T+DAWQVADNLLHD++SNLETLIFC
Sbjct: 1 MEHQNAVKEALNALYHHPDDTVRVHADRWLQNFQGTLDAWQVADNLLHDSSSNLETLIFC 60
Query: 61 SQTLRSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAED 120
SQTLRSKVQRD EELP A + L+ SL TLLKKFHKGPPKVRTQISIAVAALAVH+ A D
Sbjct: 61 SQTLRSKVQRDFEELPPGAFQKLRQSLTTLLKKFHKGPPKVRTQISIAVAALAVHVPAAD 120
Query: 121 WGGGGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
WG GGI++WLRDEM+ HPE+VPGFLELLTVLPEE FNYKIAARP+RRRQFEKELTSQME
Sbjct: 121 WGDGGIISWLRDEMHMHPEYVPGFLELLTVLPEETFNYKIAARPDRRRQFEKELTSQMEA 180
Query: 181 ALSTLTACLHINELKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASV 240
ALS L+ACL I+ELKEQVLEAFASWLRL+H IPG+VLA HPLV ALSSL+ + LSEASV
Sbjct: 181 ALSILSACLKISELKEQVLEAFASWLRLRHGIPGTVLACHPLVHAALSSLNCDPLSEASV 240
Query: 241 NVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDEEDVKAIARLFADMG 300
NVISELIH++A+ SSGG + PLIQVIVPQI+SL+AHL DSSKDEEDVKAI RLFAD+G
Sbjct: 241 NVISELIHHTASPSSGGISAQTPLIQVIVPQILSLQAHLRDSSKDEEDVKAIGRLFADVG 300
Query: 301 DSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFGNEA 360
DSYVELIATGSDE M+IVHALLEV +HPE+DIASMTFNFWHSLQ++LTKR+SY S G+EA
Sbjct: 301 DSYVELIATGSDEPMVIVHALLEVTAHPEFDIASMTFNFWHSLQLMLTKRESYSSLGSEA 360
Query: 361 SAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSLEDLKEFKHTRYDLA 413
S E ER+RRL +F+ AY+SLVSLV FRVQYP+DYQ LS EDLKEFK TRY +A
Sbjct: 361 SIEVERNRRLHIFQPAYQSLVSLVGFRVQYPEDYQGLSYEDLKEFKQTRYAVA 413
Score = 1036 (369.7 bits), Expect = 5.4e-281, Sum P(2) = 5.4e-281
Identities = 223/383 (58%), Positives = 256/383 (66%)
Query: 374 RSAYESLVSLVSFRVQ-------YPQDYQDLSLEDLKEFKHTRY--DLACCSSSTLTESV 424
R +Y SL S S V+ + YQ SL L F+ +Y D S L E
Sbjct: 350 RESYSSLGSEASIEVERNRRLHIFQPAYQ--SLVSLVGFR-VQYPEDYQGLSYEDLKEFK 406
Query: 425 ML-IAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTY 483
AVADVLIDAA +LGGD TLKILY+K +E A GN +WRPAEA LFCI AIS Y
Sbjct: 407 QTRYAVADVLIDAALILGGDTTLKILYMKLLEANAQTGNNFQDWRPAEAILFCIWAISNY 466
Query: 484 VSVVEAEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSG 543
VSVVEAEVMPQVMA T CL +GAYSKW +AA + SIL S++ IL SG
Sbjct: 467 VSVVEAEVMPQVMALLQNLPQQAQLLQTACLLVGAYSKWLNAAPASVSILPSIIRILMSG 526
Query: 544 MSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEA 603
M TSED FRH CDDCRK LCGY + L+N+Y A+NG G KVSAEDSL+LVEA
Sbjct: 527 MGTSEDCAAAAALAFRHTCDDCRKNLCGYFEDLFNIYCMAINGGGGYKVSAEDSLNLVEA 586
Query: 604 LSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRY 663
L MV+TELP AK ALE LC +PL+E E L+KKH R+LTVHIDRFA++FRY
Sbjct: 587 LGMVVTELPLDQAKGALEKLCFSAASPLEEAAK---EDLEKKHARELTVHIDRFAFLFRY 643
Query: 664 VNHPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAILEE 723
VNHPEAVA I + W IF+ IFD R WDMRTMESLCRACKYAVRTS R++ TIG +LE+
Sbjct: 644 VNHPEAVAAEINKHWAIFRVIFDARPWDMRTMESLCRACKYAVRTSGRYIIDTIGEMLEK 703
Query: 724 IQGLYQQHQQPCFLYLSSEVIKV 746
IQ YQQH QPCFLYLSSEVIK+
Sbjct: 704 IQFHYQQHHQPCFLYLSSEVIKI 726
>UNIPROTKB|Q9Y5L0 [details] [associations]
symbol:TNPO3 "Transportin-3" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0035048 "splicing factor protein import into
nucleus" evidence=IDA] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR016024
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0004872 EMBL:CH236950 EMBL:AC025594
InterPro:IPR013598 Pfam:PF08389 Orphanet:186 eggNOG:NOG237172
KO:K15436 EMBL:AF145029 EMBL:AJ133769 EMBL:AK225999 EMBL:AC018639
EMBL:BC009221 IPI:IPI00395694 IPI:IPI00455127 IPI:IPI00944945
IPI:IPI01009481 RefSeq:NP_001177957.2 RefSeq:NP_036602.1
UniGene:Hs.193613 ProteinModelPortal:Q9Y5L0 SMR:Q9Y5L0
IntAct:Q9Y5L0 MINT:MINT-1194798 STRING:Q9Y5L0 PhosphoSite:Q9Y5L0
DMDM:166215035 PaxDb:Q9Y5L0 PRIDE:Q9Y5L0 DNASU:23534
Ensembl:ENST00000265388 Ensembl:ENST00000471234 GeneID:23534
KEGG:hsa:23534 UCSC:uc003vol.2 CTD:23534 GeneCards:GC07M128594
HGNC:HGNC:17103 HPA:HPA039555 MIM:610032 neXtProt:NX_Q9Y5L0
PharmGKB:PA134888159 HOGENOM:HOG000273876 HOVERGEN:HBG057505
OrthoDB:EOG4QRH3B GenomeRNAi:23534 NextBio:46030
ArrayExpress:Q9Y5L0 Bgee:Q9Y5L0 CleanEx:HS_TNPO3
Genevestigator:Q9Y5L0 GermOnline:ENSG00000064419 GO:GO:0035048
Uniprot:Q9Y5L0
Length = 923
Score = 372 (136.0 bits), Expect = 5.9e-51, Sum P(2) = 5.9e-51
Identities = 97/360 (26%), Positives = 183/360 (50%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--WKG--C 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKEQVL-EAF---ASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E++L + F SW L + + +A++ L+ L + S
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNLGV-LDSNFMANNKLLALLFEVLQQDKTSSNLHEA 244
Query: 243 ISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFADMG 300
S+ + SA + N+PL + +++L+ H+ + +D + V R+F ++
Sbjct: 245 ASDCV-CSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELC 303
Query: 301 DSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFG 357
++++E I + + + LL A HP+Y++ ++FNFW+ L L K + + G
Sbjct: 304 ETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHG 363
Score = 240 (89.5 bits), Expect = 5.9e-51, Sum P(2) = 5.9e-51
Identities = 78/324 (24%), Positives = 132/324 (40%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY EG + W EA LF + AI+ V
Sbjct: 403 VSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWEVTEAVLFIMAAIAKSVDPEN 455
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
+ +V+ +I + + +P L VL L G+ +
Sbjct: 456 NPTLVEVLEGVVRLPETVHTAVRYT-SIELVGEMSEVVDRNPQFLDPVLGYLMKGLC-EK 513
Query: 549 DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
+IC CR + + +GL + R+ S +S E ++ L++ ++V+
Sbjct: 514 PLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSL----DSFLLSPEAAVGLLKGTALVL 569
Query: 609 TELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN--- 665
LP + L LC V L+++++Q P P TV +DR A IFR+ N
Sbjct: 570 ARLPLDKITECLSELCSVQVMALKKLLSQEPSNGISSDP---TVFLDRLAVIFRHTNPIV 626
Query: 666 -----HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAI 720
HP IQ +WP+ + D R +E CR ++AVR + + +
Sbjct: 627 ENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPL 684
Query: 721 LEEIQGLYQQHQQPCFLYLSSEVI 744
+ ++ +Y HQ CFLYL S ++
Sbjct: 685 VTQMVNVYHVHQHSCFLYLGSILV 708
>UNIPROTKB|A5D7C4 [details] [associations]
symbol:TNPO3 "TNPO3 protein" species:9913 "Bos taurus"
[GO:0035048 "splicing factor protein import into nucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
GeneTree:ENSGT00530000063347 KO:K15436 CTD:23534
HOGENOM:HOG000273876 HOVERGEN:HBG057505 OrthoDB:EOG4QRH3B
GO:GO:0035048 OMA:RENNPTL EMBL:DAAA02011499 EMBL:DAAA02011500
EMBL:BC140505 IPI:IPI00709094 RefSeq:NP_001091559.1
UniGene:Bt.76380 STRING:A5D7C4 Ensembl:ENSBTAT00000006573
GeneID:537183 KEGG:bta:537183 InParanoid:A5D7C4 NextBio:20877081
Uniprot:A5D7C4
Length = 923
Score = 364 (133.2 bits), Expect = 8.6e-51, Sum P(2) = 8.6e-51
Identities = 96/360 (26%), Positives = 182/360 (50%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--WKG--C 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKEQVL-EAF---ASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E++L + F SW L + + +A++ L+ L + S
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNLGV-LDSNFMANNKLLALLFEVLQQDKTSSNLHEA 244
Query: 243 ISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFADMG 300
S+ + SA + N+ L + +++L+ H+ + +D + V R+F ++
Sbjct: 245 ASDCV-CSALYAIENVETNLALAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELC 303
Query: 301 DSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFG 357
++++E I + + + LL A HP+Y++ ++FNFW+ L L K + + G
Sbjct: 304 ETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHG 363
Score = 247 (92.0 bits), Expect = 8.6e-51, Sum P(2) = 8.6e-51
Identities = 80/324 (24%), Positives = 133/324 (41%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY EG + W EA LF + AI+ V
Sbjct: 403 VSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWEVTEAVLFIMAAIAKSVDPEN 455
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
+ +V+ +I + + +P L VL L G+ +
Sbjct: 456 NPTLVEVLEGVVRLPETVHTAVRYT-SIELVGEMSEVVDRNPQFLDPVLGYLMKGLC-EK 513
Query: 549 DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
+IC CR + + +GL + R+ S +S E ++ L++ ++V+
Sbjct: 514 PLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSL----DSFMLSPEAAVGLLKGTALVL 569
Query: 609 TELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN--- 665
LP + L LC V L+++++Q P P TV +DR A IFR+ N
Sbjct: 570 ARLPLDKITECLSELCSVQVLALKKLLSQEPSNGISSDP---TVFLDRLAVIFRHTNPVV 626
Query: 666 -----HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAI 720
HP IQ +WPI + D R +E CR ++AVR + + +
Sbjct: 627 ENGQTHP--CQKVIQEIWPILSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPL 684
Query: 721 LEEIQGLYQQHQQPCFLYLSSEVI 744
+ ++ +YQ HQ CFLYL S ++
Sbjct: 685 VTQMVNVYQVHQHSCFLYLGSILV 708
>MGI|MGI:1196412 [details] [associations]
symbol:Tnpo3 "transportin 3" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0035048 "splicing factor protein import into
nucleus" evidence=ISO] InterPro:IPR016024 MGI:MGI:1196412
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 UniGene:Mm.304472 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 GeneTree:ENSGT00530000063347
KO:K15436 CTD:23534 HOGENOM:HOG000273876 HOVERGEN:HBG057505
OrthoDB:EOG4QRH3B GO:GO:0035048 EMBL:AK049446 EMBL:AK077714
EMBL:BC052756 EMBL:BC064646 IPI:IPI00464114 IPI:IPI00464115
IPI:IPI00761835 RefSeq:NP_796270.2 UniGene:Mm.276381
UniGene:Mm.352219 UniGene:Mm.424508 UniGene:Mm.429470
UniGene:Mm.439108 ProteinModelPortal:Q6P2B1 SMR:Q6P2B1
STRING:Q6P2B1 PhosphoSite:Q6P2B1 PaxDb:Q6P2B1 PRIDE:Q6P2B1
Ensembl:ENSMUST00000012679 Ensembl:ENSMUST00000115251 GeneID:320938
KEGG:mmu:320938 UCSC:uc009bdy.1 UCSC:uc009bea.1 OMA:RENNPTL
ChiTaRS:TNPO3 NextBio:397720 Bgee:Q6P2B1 CleanEx:MM_TNPO3
Genevestigator:Q6P2B1 GermOnline:ENSMUSG00000012535 Uniprot:Q6P2B1
Length = 923
Score = 369 (135.0 bits), Expect = 3.4e-50, Sum P(2) = 3.4e-50
Identities = 96/357 (26%), Positives = 182/357 (50%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--WKG--C 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKEQVL-EAF---ASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E++L + F SW L + + +A++ L+ L + S
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNLGV-LDSNFMANNKLLALLFEVLQQDKTSSNLHEA 244
Query: 243 ISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFADMG 300
S+ + SA + N+PL + +++L+ H+ + +D + V R+F ++
Sbjct: 245 ASDCV-CSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELC 303
Query: 301 DSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYI 354
++++E I + + + LL A HP+Y++ ++FNFW+ L L K + +
Sbjct: 304 ETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV 360
Score = 236 (88.1 bits), Expect = 3.4e-50, Sum P(2) = 3.4e-50
Identities = 77/324 (23%), Positives = 131/324 (40%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY EG + W EA LF + AI+ V
Sbjct: 403 VSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWEVTEAVLFIMAAIAKSVDPEN 455
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
+ +V+ +I + + +P L VL L G+ +
Sbjct: 456 NPTLVEVLEGVVHLPETVHTAVRYT-SIELVGEMSEVVDRNPQFLDPVLGYLMKGLC-EK 513
Query: 549 DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
+IC CR + + +GL + + S +S E ++ L++ ++V+
Sbjct: 514 PLASAAAKAIHNICSVCRDHMAQHFNGLLEIAHSL----DSFMLSPEAAVGLLKGTALVL 569
Query: 609 TELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN--- 665
LP + L LC V L+++++Q P P TV +DR A IFR+ N
Sbjct: 570 ARLPLDKITECLSELCSVQVMALKKLLSQEPSNGISSDP---TVFLDRLAVIFRHTNPIV 626
Query: 666 -----HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAI 720
HP IQ +WP+ + D R +E CR ++AVR + + +
Sbjct: 627 ENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPL 684
Query: 721 LEEIQGLYQQHQQPCFLYLSSEVI 744
+ ++ +Y HQ CFLYL S ++
Sbjct: 685 VTQMVNVYHVHQHSCFLYLGSILV 708
>RGD|1308938 [details] [associations]
symbol:Tnpo3 "transportin 3" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0035048 "splicing
factor protein import into nucleus" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR016024
RGD:1308938 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 OrthoDB:EOG4QRH3B GO:GO:0035048
EMBL:AC095491 IPI:IPI00565121 Ensembl:ENSRNOT00000043902
UCSC:RGD:1308938 ArrayExpress:D4AAM0 Uniprot:D4AAM0
Length = 929
Score = 369 (135.0 bits), Expect = 3.5e-50, Sum P(2) = 3.5e-50
Identities = 96/357 (26%), Positives = 182/357 (50%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--WKG--C 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKEQVL-EAF---ASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E++L + F SW L + + +A++ L+ L + S
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNLGV-LDSNFMANNKLLALLFEVLQQDKTSSNLHEA 244
Query: 243 ISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFADMG 300
S+ + SA + N+PL + +++L+ H+ + +D + V R+F ++
Sbjct: 245 ASDCV-CSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELC 303
Query: 301 DSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYI 354
++++E I + + + LL A HP+Y++ ++FNFW+ L L K + +
Sbjct: 304 ETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV 360
Score = 236 (88.1 bits), Expect = 3.5e-50, Sum P(2) = 3.5e-50
Identities = 77/324 (23%), Positives = 131/324 (40%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY EG + W EA LF + AI+ V
Sbjct: 403 VSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWEVTEAVLFIMAAIAKSVDPEN 455
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
+ +V+ +I + + +P L VL L G+ +
Sbjct: 456 NPTLVEVLEGVVHLPETVHTAVRYT-SIELVGEMSEVVDRNPQFLDPVLGYLMKGLC-EK 513
Query: 549 DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
+IC CR + + +GL + + S +S E ++ L++ ++V+
Sbjct: 514 PLASAAAKAIHNICSVCRDHMAQHFNGLLEIAHSL----DSFMLSPEAAVGLLKGTALVL 569
Query: 609 TELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN--- 665
LP + L LC V L+++++Q P P TV +DR A IFR+ N
Sbjct: 570 ARLPLDKITECLSELCSVQVMALKKLLSQEPSNGISSDP---TVFLDRLAVIFRHTNPIV 626
Query: 666 -----HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAI 720
HP IQ +WP+ + D R +E CR ++AVR + + +
Sbjct: 627 ENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPL 684
Query: 721 LEEIQGLYQQHQQPCFLYLSSEVI 744
+ ++ +Y HQ CFLYL S ++
Sbjct: 685 VTQMVNVYHVHQHSCFLYLGSILV 708
>UNIPROTKB|C9J7E5 [details] [associations]
symbol:TNPO3 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0006810 "transport" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC025594
InterPro:IPR013598 Pfam:PF08389 EMBL:AC018639 HGNC:HGNC:17103
HOGENOM:HOG000273876 OMA:RENNPTL IPI:IPI00872398 SMR:C9J7E5
STRING:C9J7E5 Ensembl:ENST00000393245 Ensembl:ENST00000471166
UCSC:uc010lly.2 Uniprot:C9J7E5
Length = 957
Score = 372 (136.0 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 97/360 (26%), Positives = 183/360 (50%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--WKG--C 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKEQVL-EAF---ASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E++L + F SW L + + +A++ L+ L + S
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNLGV-LDSNFMANNKLLALLFEVLQQDKTSSNLHEA 244
Query: 243 ISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFADMG 300
S+ + SA + N+PL + +++L+ H+ + +D + V R+F ++
Sbjct: 245 ASDCV-CSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELC 303
Query: 301 DSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFG 357
++++E I + + + LL A HP+Y++ ++FNFW+ L L K + + G
Sbjct: 304 ETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHG 363
Score = 221 (82.9 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 60/229 (26%), Positives = 101/229 (44%)
Query: 524 DAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTA 583
+ +P L VL L G+ + +IC CR + + +GL + R+
Sbjct: 524 EVVDRNPQFLDPVLGYLMKGLC-EKPLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSL 582
Query: 584 VNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQ 643
S +S E ++ L++ ++V+ LP + L LC V L+++++Q P
Sbjct: 583 ----DSFLLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEPSNGI 638
Query: 644 KKHPRDLTVHIDRFAYIFRYVN--------HPEAVADAIQRLWPIFKAIFDIRAWDMRTM 695
P TV +DR A IFR+ N HP IQ +WP+ + D R +
Sbjct: 639 SSDP---TVFLDRLAVIFRHTNPIVENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIV 693
Query: 696 ESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFLYLSSEVI 744
E CR ++AVR + + ++ ++ +Y HQ CFLYL S ++
Sbjct: 694 ERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILV 742
>UNIPROTKB|F1SMQ0 [details] [associations]
symbol:TNPO3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035048 "splicing factor protein import into nucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 GO:GO:0035048 OMA:RENNPTL
EMBL:CU928618 EMBL:CU638846 Ensembl:ENSSSCT00000018042
Uniprot:F1SMQ0
Length = 921
Score = 372 (136.0 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 97/360 (26%), Positives = 183/360 (50%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--WKG--C 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKEQVL-EAF---ASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E++L + F SW L + + +A++ L+ L + S
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNLGV-LDSNFMANNKLLALLFEVLQQDKTSSNLHEA 244
Query: 243 ISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFADMG 300
S+ + SA + N+PL + +++L+ H+ + +D + V R+F ++
Sbjct: 245 ASDCV-CSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELC 303
Query: 301 DSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFG 357
++++E I + + + LL A HP+Y++ ++FNFW+ L L K + + G
Sbjct: 304 ETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEVIHG 363
Score = 218 (81.8 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 76/326 (23%), Positives = 131/326 (40%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY EG + W EA LF + AI+ V
Sbjct: 403 VSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWEVTEAVLFIMAAIAKSVDPEN 455
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
+ +V+ +I + + +P L VL L G+ +
Sbjct: 456 NPTLVEVLEGVVRLPETVHTAVRYT-SIELVGEMSEVVDRNPQFLDPVLGYLMKGLC-EK 513
Query: 549 DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
+IC CR + + +GL + R+ S +S E ++ L++ ++V+
Sbjct: 514 PLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSL----DSFMLSPEAAVGLLKGTALVL 569
Query: 609 TELPQVDAKKALEMLCLPVVTPLQ--EIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN- 665
LP + L L + + L ++++Q P P TV +DR A IFR+ N
Sbjct: 570 ARLPLDKITECLSELLVCYLEELYIIKLLSQEPSNGISSDP---TVFLDRLAVIFRHTNP 626
Query: 666 -------HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIG 718
HP IQ +WP+ + D R +E CR ++AVR + +
Sbjct: 627 IVENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQ 684
Query: 719 AILEEIQGLYQQHQQPCFLYLSSEVI 744
++ ++ +Y HQ CFLYL S ++
Sbjct: 685 PLVTQMVNVYHVHQHSCFLYLGSILV 710
>ZFIN|ZDB-GENE-040426-708 [details] [associations]
symbol:tnpo3 "transportin 3" species:7955 "Danio
rerio" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR001494
InterPro:IPR016024 SMART:SM00913 ZFIN:ZDB-GENE-040426-708
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0005643 EMBL:BX465210 InterPro:IPR013598
Pfam:PF08389 GeneTree:ENSGT00530000063347 KO:K15436 CTD:23534
HOGENOM:HOG000273876 HOVERGEN:HBG057505 OMA:RENNPTL EMBL:BC045332
IPI:IPI00504575 RefSeq:NP_957381.1 UniGene:Dr.2195 STRING:Q7ZW13
Ensembl:ENSDART00000067161 GeneID:394062 KEGG:dre:394062
InParanoid:Q7ZW13 NextBio:20815020 Uniprot:Q7ZW13
Length = 923
Score = 358 (131.1 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 89/346 (25%), Positives = 178/346 (51%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD A + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQ-LKQDIESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP ++ L+DSL + ++ P + TQ+++A+A LA+ +++ W G
Sbjct: 70 KIQTSFYELPPDSHTALRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMAS--WKG--C 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V+ L ++ ++ + +E+LTVLPEEV + + RR + ++L ++ L
Sbjct: 126 VHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTVVTLLV 185
Query: 187 ACL----HINELKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C H ++ +V SW L + + +A++ L++ L + S
Sbjct: 186 TCAEKSGHDEKMLIKVFRCLGSWFNLGV-LDNNFMANNQLLMILFQVLQRDETSTNLHEA 244
Query: 243 ISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFADMG 300
S+ + SA + +++PL + +++L+ H+ + +D + V R+F ++
Sbjct: 245 ASDCV-CSALYAIENVAIHLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELC 303
Query: 301 DSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSL 343
++++E+ + M + LL A HP+Y++ ++FNFW+ L
Sbjct: 304 ETFLEMTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRL 349
Score = 233 (87.1 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 78/326 (23%), Positives = 137/326 (42%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY EG + W EA LF + +I+ V
Sbjct: 403 VSDLVKDVIFLVGSMECFAQLYSTLREG-------NPPWEVTEAVLFIMASIAKNVDPEN 455
Query: 489 AEVMPQVMAXXXXX--XXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMST 546
+ +V+ T +G S+ D +PS+L +VL+ L G+
Sbjct: 456 NPTLMEVLEQIVLLPETVHLAVRYTSIELVGEMSEVIDR---NPSMLDTVLNFLMKGLR- 511
Query: 547 SEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSM 606
+ +IC CR + + GL ++ R+ S +S + ++ L++ ++
Sbjct: 512 EKPLASAAAKAIHNICSVCRDHMAQHFQGLLDIARSL----DSFALSTDAAVGLLKGTAL 567
Query: 607 VITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN- 665
V+ LP + L LC V L++++ Q + P TV +DR A IFR+ N
Sbjct: 568 VLARLPLEKIAECLNDLCAVQVMALKKLLAQDSSSGKSSDP---TVWLDRLAVIFRHTNP 624
Query: 666 -------HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIG 718
HP IQ +WP+ + D R +E CR ++AVR + +
Sbjct: 625 IVENGQTHP--CQKVIQEIWPVLSETLNAHQSDNRIVERCCRCLRFAVRCVGKGSASLLQ 682
Query: 719 AILEEIQGLYQQHQQPCFLYLSSEVI 744
++ ++ +YQ + CFLYL S ++
Sbjct: 683 PLVTQMVSVYQLYPHSCFLYLGSILV 708
>FB|FBgn0031456 [details] [associations]
symbol:Trn-SR "Transportin-Serine/Arginine rich" species:7227
"Drosophila melanogaster" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] [GO:0035048 "splicing factor protein import into
nucleus" evidence=IDA;IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 SMART:SM00913
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AE014134 GO:GO:0022008 GO:GO:0008565
GO:GO:0005643 GO:GO:0048024 InterPro:IPR013598 Pfam:PF08389
eggNOG:NOG237172 GeneTree:ENSGT00530000063347 KO:K15436
GO:GO:0035048 OMA:RENNPTL EMBL:AY095186 RefSeq:NP_608708.2
UniGene:Dm.11639 SMR:Q9VQG0 IntAct:Q9VQG0 MINT:MINT-301134
STRING:Q9VQG0 EnsemblMetazoa:FBtr0077715 GeneID:33465
KEGG:dme:Dmel_CG2848 UCSC:CG2848-RA CTD:33465 FlyBase:FBgn0031456
InParanoid:Q9VQG0 OrthoDB:EOG43TX9D GenomeRNAi:33465 NextBio:783700
Uniprot:Q9VQG0
Length = 932
Score = 316 (116.3 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 100/362 (27%), Positives = 176/362 (48%)
Query: 5 NTVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTL 64
+ V +A++AL+ + + +A++WLQDFQ +I +W +AD LLH +L F +QT+
Sbjct: 7 DVVYQAISALFQGNNPKEQEKANKWLQDFQKSIYSWTIADELLHQKR-DLHANYFAAQTM 65
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVR-TQISIAVAALAVHISAEDWGG 123
R+K+Q ELP L+DSL T + + + V TQ+S+AVA LA+ +++ W
Sbjct: 66 RNKIQNSFSELPPHTHESLRDSLITHIGQIDEQTDNVIVTQLSLAVADLALLMAS--WRE 123
Query: 124 GGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALS 183
+N L + H + LE+L VLPEE+ + + RR + K+L + E L
Sbjct: 124 P--INDLLVTLAPHQCAIWPLLEVLKVLPEEIDSRYLRLGANRREEVHKQLDASAECVLK 181
Query: 184 TLTACLHINELKEQ-----VLEAFASWLRLKHRIPGSVLASHPLVLTA--LSSLH--SEI 234
L CL +L +Q L +++WL + H P S + ++ L A L SL S
Sbjct: 182 FLCMCLQREDLDQQRVWNAALRTYSAWLVI-HAFPVSHVYNNALTQLAFRLLSLPETSGK 240
Query: 235 LSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAI 292
L + + + L+ G + + + L+ HL+ + +D +
Sbjct: 241 LHDNATECVCALLSCINTRQDGASDPESSFEAQLFGAVCMLETPYHLSVAHEDTDKTINY 300
Query: 293 ARLFADMGDSYV-ELIATGSDE--SMLIVHALLEVASHPEYDIASMTFNFWHSLQVILTK 349
R+F + D++ +L+A S+ + +L H +Y++A +TF+ W+ L L +
Sbjct: 301 CRIFTSLCDAFFYDLLADAQKPHYSLKGLDLVLLCVGHFDYEVAEITFHLWYKLSEDLFQ 360
Query: 350 RD 351
R+
Sbjct: 361 RN 362
Score = 259 (96.2 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 76/326 (23%), Positives = 143/326 (43%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D A ++G A K ++ ++ W EAALF ++ ++ + E
Sbjct: 408 VSDLIKDVAFIVGSGACFKQMF-HILQA------PETTWESTEAALFIMQNVAKNILPDE 460
Query: 489 AEVMPQVMAXXXXXXXXXXXXX--TVCLTIGAYSKWFDAASSDPSILASVLSILTSGMST 546
EV+P+V+ T L IG W + + P L +VL+ L +
Sbjct: 461 NEVIPKVVEAILNMSEQTHIAVRYTAILLIGELCDWIE---NHPESLEAVLNFLLYALQQ 517
Query: 547 SEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSM 606
IC CR+K+ ++ GL + R+ S +++ + ++ L++ +S+
Sbjct: 518 KNGLAPAAAIALTSICSACRQKMVCHISGLVEIARSL----DSFQINNDVAIGLLKGISL 573
Query: 607 VITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN- 665
++T LP+ + AL + + PL ++++ QK D IDR I R+ N
Sbjct: 574 ILTRLPREQLQPALREIVGFQLQPLAQLVDSTGSTPQKGERTDPVYWIDRACAIIRHTNP 633
Query: 666 -------HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIG 718
HP VA + W + + D D+R ME CR +Y +R ++ + +
Sbjct: 634 DVPDNVEHP-TVA-ILNDAWQLISRVMDKYQSDLRIMERTCRLIRYGIRMVRKQAMMLVE 691
Query: 719 AILEEIQGLYQQHQQPCFLYLSSEVI 744
+++++ LY CFLY+ S ++
Sbjct: 692 PLIKQMVVLYSVQHHSCFLYVGSILV 717
Score = 41 (19.5 bits), Expect = 8.3e-24, Sum P(2) = 8.3e-24
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 423 SVMLIAVADVLIDAASVLGGD 443
S ML+ VA+VL + V+G +
Sbjct: 855 SYMLVDVAEVLHELKQVVGNE 875
>CGD|CAL0001884 [details] [associations]
symbol:MTR10 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
evidence=IEA] [GO:0006609 "mRNA-binding (hnRNP) protein import into
nucleus" evidence=IEA] [GO:0006404 "RNA import into nucleus"
evidence=IEA] [GO:0051031 "tRNA transport" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 CGD:CAL0001884 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643
InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172 EMBL:AACQ01000210
KO:K15436 RefSeq:XP_711171.1 ProteinModelPortal:Q59N69
STRING:Q59N69 GeneID:3647235 KEGG:cal:CaO19.1119 Uniprot:Q59N69
Length = 959
Score = 305 (112.4 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 114/447 (25%), Positives = 205/447 (45%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHD---ATSNLETLIFCSQT 63
+ AL +Y + +M A +L++FQ + AW + +L+D SN++ IF +QT
Sbjct: 9 LNSALVTMYSNVPQQEKMTATHYLEEFQKSQQAWDIVHQILNDENNGNSNIQLKIFAAQT 68
Query: 64 LRSKVQRDVE-ELPSEAVRGLQDSLNTLLKKFHKGPPK-VRTQISIAVAALAVHISAEDW 121
LRSK+ D+ + P L++SL +L K+ K +RTQ+SIA++ A+ + W
Sbjct: 69 LRSKIIYDLSAQFPESNFENLKNSLLEILSKYTAPNQKLIRTQLSIALSHFALQYLS--W 126
Query: 122 GGGGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERR-RQFEKELTS---- 176
++ + ++++S +P LE L +LPEE+ + K + Q +EL S
Sbjct: 127 RNA--LSEIINKLSSSETLLPVLLEFLKILPEELSDVKKTNLTDSEFNQRTQELISDNVE 184
Query: 177 QMEVALSTLTACLHINE--LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEI 234
Q+ + L LT N + +L+ SW+ K VL + LV SL ++
Sbjct: 185 QVMMILKNLTESNTNNNASMNSSILDCLNSWI--KECAVEQVLQINSLVSLVFQSLSNDQ 242
Query: 235 LSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDE-ED---VK 290
E ++ + +I + N +I + Q++ L ++ +++ D+ ED V
Sbjct: 243 TFEKAIECLVTIIRETRDID------NYEIIDALYQQVLQLNKYMHENTPDKLEDPEYVD 296
Query: 291 AIARLFADMGDSYVELIATGSDESMLIVHALLEVASHPE-YDIASMTFNFWHSLQVILTK 349
+ RL+ + G+S+ LI +V +LE + E DI TF FW+ L+ ++T
Sbjct: 297 GLTRLYVECGESWHVLIGKNPAHFKPLVLIILECTKYDEDLDIVKYTFQFWYQLKQLITL 356
Query: 350 RDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSL-----EDLKE 404
F E+ A VF Y L++++ + YP D L E +
Sbjct: 357 P----KF-QESKA---------VFGDIYLQLITVIIKHLTYPISGNDNDLFNGDKEQEDK 402
Query: 405 FKHTRYDLA-----CCSSSTLTESVML 426
FK RY++ CC+ + T+++ +
Sbjct: 403 FKEFRYEMGDVLKDCCAVAGATKALQV 429
Score = 219 (82.2 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 76/327 (23%), Positives = 137/327 (41%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
+ DVL D +V G AT K L + F + N W+ EA LF +R ++ V + E
Sbjct: 410 MGDVLKDCCAVAG--AT-KALQVPFEQIQNIISNSQGHWQYLEAPLFSMRTMAKEVPLKE 466
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
++P +M+ L +G Y++W S P L L+ +T G ++
Sbjct: 467 NTILPTIMSYLVQLPEHPKIRYAATLVLGRYTEW---TSKHPEFLEPQLNYITKGFEVAD 523
Query: 549 ---DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALS 605
D + C DC + L YL+ LY +Y G+ ++ E + L + L+
Sbjct: 524 KNNDIIMATSHALMYFCQDCSEFLVNYLEQLYMLY-----GQVKDQMDLESNYELADGLA 578
Query: 606 MVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN 665
VI ++P K EM P + L +++ + P K D I F + + +
Sbjct: 579 HVIAKVPIDSLYKTTEMFIEPTMNYLSKVLAENPTDESNKLIADQIEVISIFIEVLKCPD 638
Query: 666 H----PE-AVADA-IQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGA 719
P+ VA + ++WP+ I + E + K A+++ F+ +
Sbjct: 639 SDWEKPKYPVAGLFVDKIWPLTTQILSKFGSSVIVSERCMKLLKNAIKSFGLFLSSILPD 698
Query: 720 ILEEI-QGLYQQHQQPCFLYLSSEVIK 745
+ + QGL Q Q C+++++ +I+
Sbjct: 699 LANLLHQGL-QSTQFGCYIWVTGVLIR 724
Score = 40 (19.1 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 3 LQNTVKEALNALYHHPDDA-VRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLI 58
L+N++ E L+ Y P+ +R Q L F +W+ A + + + S+ ETL+
Sbjct: 89 LKNSLLEILSK-YTAPNQKLIRTQLSIALSHFALQYLSWRNALSEIINKLSSSETLL 144
>UNIPROTKB|E9PFH4 [details] [associations]
symbol:TNPO3 "Transportin-3" species:9606 "Homo sapiens"
[GO:0006810 "transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AC025594 InterPro:IPR013598 Pfam:PF08389
EMBL:AC018639 HGNC:HGNC:17103 IPI:IPI00946283
ProteinModelPortal:E9PFH4 SMR:E9PFH4 Ensembl:ENST00000482320
ArrayExpress:E9PFH4 Bgee:E9PFH4 Uniprot:E9PFH4
Length = 857
Score = 259 (96.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 76/303 (25%), Positives = 147/303 (48%)
Query: 64 LRSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGG 123
++ K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 1 MKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--WKG 58
Query: 124 GGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALS 183
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S
Sbjct: 59 --CVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVS 116
Query: 184 TLTACLHINELKEQVL-EAF---ASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEAS 239
L C+ E++L + F SW L + + +A++ L+ L + S
Sbjct: 117 LLMTCVEKAGTDEKMLMKVFRCLGSWFNLGV-LDSNFMANNKLLALLFEVLQQDKTSSNL 175
Query: 240 VNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIARLFA 297
S+ + SA + N+PL + +++L+ H+ + +D + V R+F
Sbjct: 176 HEAASDCV-CSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT 234
Query: 298 DMGDSYVELIATGSDESM---LIVHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYI 354
++ ++++E I + + + LL A HP+Y++ ++FNFW+ L L K + +
Sbjct: 235 ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV 294
Query: 355 SFG 357
G
Sbjct: 295 IHG 297
Score = 240 (89.5 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 78/324 (24%), Positives = 132/324 (40%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY EG + W EA LF + AI+ V
Sbjct: 337 VSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWEVTEAVLFIMAAIAKSVDPEN 389
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
+ +V+ +I + + +P L VL L G+ +
Sbjct: 390 NPTLVEVLEGVVRLPETVHTAVRYT-SIELVGEMSEVVDRNPQFLDPVLGYLMKGLC-EK 447
Query: 549 DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
+IC CR + + +GL + R+ S +S E ++ L++ ++V+
Sbjct: 448 PLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSL----DSFLLSPEAAVGLLKGTALVL 503
Query: 609 TELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN--- 665
LP + L LC V L+++++Q P P TV +DR A IFR+ N
Sbjct: 504 ARLPLDKITECLSELCSVQVMALKKLLSQEPSNGISSDP---TVFLDRLAVIFRHTNPIV 560
Query: 666 -----HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAI 720
HP IQ +WP+ + D R +E CR ++AVR + + +
Sbjct: 561 ENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPL 618
Query: 721 LEEIQGLYQQHQQPCFLYLSSEVI 744
+ ++ +Y HQ CFLYL S ++
Sbjct: 619 VTQMVNVYHVHQHSCFLYLGSILV 642
Score = 44 (20.5 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 20/68 (29%), Positives = 26/68 (38%)
Query: 13 ALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLI----FCSQTLRSKV 68
+ Y P D+ D L Q+ D V L A ++L + C QTL K
Sbjct: 8 SFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGCVQTLVEKY 67
Query: 69 QRDVEELP 76
DV LP
Sbjct: 68 SNDVTSLP 75
>POMBASE|SPBC11G11.07 [details] [associations]
symbol:mtr10 "karyopherin, nuclear import receptor
Mtr10 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006404 "RNA import into nucleus"
evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=ISO] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810
PROSITE:PS50166 SMART:SM00913 PomBase:SPBC11G11.07 GO:GO:0005829
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
EMBL:CU329671 GO:GO:0005643 GO:GO:0006606 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 HOGENOM:HOG000181190 KO:K15436
OMA:TEWTSKH OrthoDB:EOG4BZR9R GO:GO:0006404 PIR:T39765
RefSeq:NP_595725.2 ProteinModelPortal:Q9USZ2 STRING:Q9USZ2
EnsemblFungi:SPBC11G11.07.1 GeneID:2539916 KEGG:spo:SPBC11G11.07
NextBio:20801059 Uniprot:Q9USZ2
Length = 955
Score = 307 (113.1 bits), Expect = 4.6e-38, Sum P(2) = 4.6e-38
Identities = 108/410 (26%), Positives = 202/410 (49%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLR 65
T+ AL LY + D ++QA+ +L++FQ + AWQ+ ++L+ S++E +F +QTLR
Sbjct: 3 TLLSALATLYANTDREQKLQANNYLEEFQKSPAAWQICFSILNQDDSSIEAKLFAAQTLR 62
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ D +LP E ++SL L P + +++ +AA+A+H++ +W
Sbjct: 63 QKIVYDFHQLPKETHIEFRNSLLQLFLAAKDSPRPLLVSLAVCMAAIALHMT--EWHN-- 118
Query: 126 IVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARP--ERRRQFEKELTSQMEVALS 183
++ + +S L+ L+VLPEE + + + E + ++ L L
Sbjct: 119 VIADVFQACSSKDPSGRCVLQFLSVLPEEASDPRKTSLSWEELCIRVDELLRDNGPAVLE 178
Query: 184 TLTACLHINELKEQ----------VLEAFASWLRLKHRIP-GSVLASHPLVLTALSSLHS 232
L +++ ++ VL + SWLR IP V+AS PL+ A SL
Sbjct: 179 LLVQ--YVDAVRASGSPSSADLGLVLTSLISWLR---EIPLDKVMAS-PLIELAFRSLDD 232
Query: 233 EILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDEEDVKAI 292
++L E +V + L + + T + I ++ P+++ L+ L + D E +A+
Sbjct: 233 DLLLEDAVEFLCALFNET---KDVDETTDA--ILMLYPRLLELQPKLIAACDDPETFRAL 287
Query: 293 ARLFADMGDSYVELIATGSDESMLIVHALLEVASHP-EYDIASMTFNFWHSLQVILTKRD 351
RLFA+ G+++V LIA ++ + +V+ + +VA++ E + TF FW L+ ++ + D
Sbjct: 288 GRLFAEAGEAWVVLIARMPNDFLPLVNCIAQVAANDTELEAIKFTFAFWWDLKQMV-ELD 346
Query: 352 SYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSLED 401
Y AEA Q+F Y LV ++ + YP+ +DL++ +
Sbjct: 347 VY--------AEAR-----QLFAPIYLELVRIIVRHLHYPRT-EDLAINE 382
Score = 187 (70.9 bits), Expect = 4.6e-38, Sum P(2) = 4.6e-38
Identities = 86/394 (21%), Positives = 164/394 (41%)
Query: 371 QVFRSAYESLVSLVSFRVQYPQDYQDLSLEDLKEFKHTRYDLACCSSSTLTESVMLIAVA 430
Q+F Y LV ++ + YP+ +DL++ + ++ + +
Sbjct: 353 QLFAPIYLELVRIIVRHLHYPRT-EDLAINEQMASNEVLFEDRDAEDRFRS---FRHEMG 408
Query: 431 DVLIDAASVLGGDATLKILYIKFVEGVAC--CGNKHNEWRPAEAALFCIRAISTYVSVVE 488
DVL D V G + L + + ++ + G + W+ EA LF +RAI V E
Sbjct: 409 DVLKDCCVVAGVSSCLVQISSQLIKVLKIKESGLPYY-WQDVEAPLFALRAIGRMVPANE 467
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTS- 547
+V+ + L +G Y++W A S+ L L+ +++G +
Sbjct: 468 DQVIGSLFQILPQLPENNKVRYAATLFLGRYTEW-TAQHSE--FLELQLNYISAGFEVAN 524
Query: 548 EDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSL-HLVEALSM 606
++ +H C DCR++L G+L L+ Y +N + L A D L + + L+
Sbjct: 525 KEVQSAAAQALKHFCYDCREQLVGHLSQLHMFY---LNAKTYL---APDPLMEVAQGLAH 578
Query: 607 VITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRD-LTVHIDRFAYIFRYVN 665
++ P + +++ P LQ I+ ++ + + L +ID IF +
Sbjct: 579 IVDIQPVANVYQSVHSFLAP---SLQSILLAQVKLNPTQAELEALADNID-IVTIFLSLV 634
Query: 666 HPEAVADAI-------QRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIG 718
HP + A + Q +WPI D + D+ E + + K + T K +T+
Sbjct: 635 HPPSPAGELHPIVRLFQDIWPILSRTLDTFS-DVLICERISKLLKNFIYTFKEKAIVTLP 693
Query: 719 AILEEIQGLYQQHQQPCFLYLSSEVIKVVFPPEV 752
I E + +++ Q CFL++S ++ PE+
Sbjct: 694 VITEALIKGFEKTQYGCFLWVSGACVRQFGVPEM 727
>UNIPROTKB|H9L0A9 [details] [associations]
symbol:H9L0A9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0035048
"splicing factor protein import into nucleus" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 OMA:RENNPTL EMBL:AADN02040997
EMBL:AADN02040998 Ensembl:ENSGALT00000022432 Uniprot:H9L0A9
Length = 855
Score = 294 (108.6 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 81/327 (24%), Positives = 163/327 (49%)
Query: 37 IDAWQVADNLLHDATSNLETLIFCSQTLRSKVQRDVEELPSEAVRGLQDSLNTLLKKFHK 96
+ AW+++D LL ++E+ F +QT++ K+Q ELP+++ L+DSL + ++
Sbjct: 5 VHAWEISDQLLQ-IRQDVESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLSHIQNLKD 63
Query: 97 GPPKVRTQISIAVAALAVHISAEDWGGGGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVF 156
P + TQ+++A+A LA+ +++ W G V L ++ ++ +P LE+LTVLPEEV
Sbjct: 64 LSPVIVTQLALAIADLALQMAS--WKG--CVQTLVEKDSNDVTSLPFLLEILTVLPEEVH 119
Query: 157 NYKIAARPERRRQFEKELTSQMEVALSTLTACLHI--NELKE--QVLEAFASWLRLKHRI 212
+ + RR + ++L +S L C+ N+ K ++ SW L +
Sbjct: 120 SRSLRIGANRRTEIIEDLAYYSSTVVSLLMTCVEKAGNDEKMLIKIFRCLGSWFNLGV-L 178
Query: 213 PGSVLASHPLVLTALSSLHSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQI 272
+ +A+ L+ L + S S+ + SA + N+PL + +
Sbjct: 179 DSTFMANSKLLSLLFEVLQQDKTSSNLHEAASDCV-CSALYAIENVETNLPLALQLFQGV 237
Query: 273 MSLKA--HLTDSSKDEEDVKAIARLFADMGDSYVELIATGSDESM---LIVHALLEVASH 327
++L++ H+ + +D + V R+F ++ +++++ I + + + LL A H
Sbjct: 238 LTLESAYHMAVAREDLDKVLNYCRVFTELCETFLDKIVCTPGQGLGDLRTLELLLICAGH 297
Query: 328 PEYDIASMTFNFWHSLQVILTKRDSYI 354
P+Y++ ++FNFW+ L L K + +
Sbjct: 298 PQYEVVEISFNFWYRLGEHLYKTEDAV 324
Score = 189 (71.6 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 67/287 (23%), Positives = 113/287 (39%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
V+D++ D ++G LY +G + W EA LF + +I+ V
Sbjct: 367 VSDLVKDLIFLVGSVECFAQLYATLKDG-------NPPWEVTEAVLFIMASIAKSVDQEN 419
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
+ +V+ +I + + +P L VL L G+
Sbjct: 420 NPTLVEVLEGVVRLPETVHTAVRYT-SIELVGEMSEVVDRNPQFLDPVLGYLMKGLCDRR 478
Query: 549 DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
+IC CR + + GL + R+ S +S E ++ L++ ++V+
Sbjct: 479 -LASAAAKAIHNICSVCRDHMAQHFTGLLEIARSL----DSFTLSPEAAVGLLKGTALVL 533
Query: 609 TELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN--- 665
LP + L LC V L+++++Q P P TV +DR A IFR+ N
Sbjct: 534 ARLPLEKIAECLSELCAVQVLALKKLLSQEPSNGLSSDP---TVPLDRLAVIFRHTNPIV 590
Query: 666 -----HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVR 707
HP IQ +WP+ + + D R +E CR ++AVR
Sbjct: 591 ENGQIHP--CQKVIQEIWPVLSETLNKHSADNRIVERCCRCLRFAVR 635
>ZFIN|ZDB-GENE-070706-1 [details] [associations]
symbol:ipo13 "importin 13" species:7955 "Danio rerio"
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR001494
InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166 SMART:SM00913
ZFIN:ZDB-GENE-070706-1 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643
InterPro:IPR013598 Pfam:PF08389 GeneTree:ENSGT00530000063347
EMBL:CABZ01059108 EMBL:CABZ01059109 EMBL:CABZ01059110
EMBL:CABZ01059111 EMBL:CABZ01059112 EMBL:CABZ01059113
EMBL:CABZ01059114 EMBL:CABZ01059115 EMBL:CABZ01059116
IPI:IPI00798712 Ensembl:ENSDART00000085624 Uniprot:F1Q9F5
Length = 946
Score = 286 (105.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 115/428 (26%), Positives = 207/428 (48%)
Query: 9 EALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLRSK 67
+AL+ LY+ P+ + A +WL Q + AWQ LL D ++ F + L +K
Sbjct: 8 QALHQLYYDPNIENKNLAQKWLMQAQVSPQAWQFCWVLLRPDKVPEIQ--YFGASALHTK 65
Query: 68 VQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGG--G 125
+ R ++P+E L+ L + + +F G V T++ +A+A+LA+++ E W G
Sbjct: 66 ISRYWSDIPAEQYDSLKSQLFSQIARFASGSKIVLTRLCVALASLALNMMPEAWPGAVSE 125
Query: 126 IVNWLRDE---MNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRR-QFEKELTSQMEVA 181
+V +++ ++ + LELLTVLPEE ++ + P+ R+ Q L S+
Sbjct: 126 MVRMFQEDGGDVDGRARCL-ALLELLTVLPEE---FQTSRLPQYRKGQVRGALGSEWTAV 181
Query: 182 LSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSE 237
L L + +K +VL+ +SW+ L +P + S LV + ++L L +
Sbjct: 182 YPLLQQLLRQPDSPSLVKARVLKCLSSWVLLD--VP--LNESEGLVEASFTALADPELFD 237
Query: 238 ASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEEDVKAIARL 295
+V I I S S VN L++ +VPQ++ L+ L D+ + D E I R+
Sbjct: 238 TAVEAIVNTI--SQPDSQ--RYVNT-LLK-LVPQVLQLQEQLRDAVQNGDMETSHGICRI 291
Query: 296 FADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDI----ASMTFNFWHSLQVIL 347
+G+++ + + +S L +V+ ++ P Y + +S+T FW++LQ
Sbjct: 292 AVSLGENHSRALLEQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQ--- 348
Query: 348 TKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDLKEF 405
D +SF EA +A LQV+R Y LV ++ + Q+P D Y S ++ ++F
Sbjct: 349 ---DDIMSF--EAEKQAVY---LQVYRPVYFQLVDVLLHKAQFPTDEEYASWSSDEKEQF 400
Query: 406 KHTRYDLA 413
+ R D++
Sbjct: 401 RIYRVDIS 408
Score = 141 (54.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 61/270 (22%), Positives = 119/270 (44%)
Query: 376 AYESLVSLVSFRVQYPQDYQ--DLSLEDLKEFKHTRYDLACCSSSTLTE-SVMLIAVADV 432
++E+ V +V P +Q D+ L +F T + A SS + + + ++D
Sbjct: 353 SFEAEKQAVYLQVYRPVYFQLVDVLLHKA-QFP-TDEEYASWSSDEKEQFRIYRVDISDT 410
Query: 433 LIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVEAEVM 492
L+ +LG + L LY K + + W+ EA L+ ++I+ + V ++V+
Sbjct: 411 LMYVYEMLGAEL-LSNLYDKLGR-LLTNTEQTTTWQHTEALLYGFQSIAETIDVNYSDVI 468
Query: 493 PQVMAXX-XXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSEDTX 551
P ++ TV TIGA ++W + P +L+SVL ++ + + D
Sbjct: 469 PGLIGLIPRININNVQLADTVMFTIGALAEWL---ADHPVMLSSVLPLVLQALG-NPDLS 524
Query: 552 XXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDS--LHLVEALSMVIT 609
+ IC +C+ L Y + AV+ E +K + S + L++AL +++
Sbjct: 525 VSSVSTLKKICRECKYDLPPYATNI-----VAVSQEVLIKQIHKTSQCMWLMQALGFLLS 579
Query: 610 ELPQVDAKKALEMLCLPVVTPLQEIINQGP 639
LP + + L L P + L+++ + P
Sbjct: 580 ALPVEEILRNLHSLITPYIQQLEKLAEETP 609
Score = 51 (23.0 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 13/80 (16%), Positives = 36/80 (45%)
Query: 667 PEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQG 726
P V +Q+++ + + + D + +E++C + +V+T + + E +
Sbjct: 656 PNPVVVVLQQVFALIQTVLSKWLNDSQVVEAVCAIFEKSVKTLLHDFAPMVSQLSEMLGQ 715
Query: 727 LYQQHQQPCFLYLSSEVIKV 746
+Y Q L L+ +++ +
Sbjct: 716 MYSTIPQASALDLTRQMVHI 735
Score = 48 (22.0 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 686 DIRAWDMRTMESLCRACKY 704
D+ + T++ +CR CKY
Sbjct: 522 DLSVSSVSTLKKICRECKY 540
Score = 37 (18.1 bits), Expect = 4.4e-30, Sum P(3) = 4.4e-30
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 626 PVVTPLQEIINQGPEILQKKHPRDLT---VHI 654
P+V+ L E++ Q + + DLT VHI
Sbjct: 704 PMVSQLSEMLGQMYSTIPQASALDLTRQMVHI 735
>TAIR|locus:2010381 [details] [associations]
symbol:AT1G12930 "AT1G12930" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR013598 Pfam:PF08389 KO:K15436 IPI:IPI00524988
RefSeq:NP_563920.1 UniGene:At.20583 ProteinModelPortal:F4HNZ9
PRIDE:F4HNZ9 EnsemblPlants:AT1G12930.1 GeneID:837851
KEGG:ath:AT1G12930 OMA:LACLMSE Uniprot:F4HNZ9
Length = 1005
Score = 334 (122.6 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 109/402 (27%), Positives = 193/402 (48%)
Query: 1 MELQNTVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETL-IF 59
MELQ V EA++ L H P+ + R+ A++WL FQ T AW V+ +LL +L L F
Sbjct: 1 MELQRKVAEAIHVLNHDPESSNRVAANQWLVQFQLTPAAWDVSTSLLTSPIVSLFDLQFF 60
Query: 60 CSQTLRSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAE 119
+Q LR K+Q + L S A L ++L K++ G P++ TQI +A++AL +H
Sbjct: 61 AAQILRRKIQNEASNLQSTAKDALLNALLLAAKRYSSGVPQLLTQICLALSALLLHSDPY 120
Query: 120 DWGGGGIVNWLRDEMNSHPEFVPGFLELLTVLPEEV-----FNYKIAARPERRRQFEKEL 174
++ L++ + +H + LELLTVLPEE+ F++ R E L
Sbjct: 121 SKPFDKLMFALQN-LQAHDDGNVVLLELLTVLPEEISDTRHFSHHSDLRQELLSHTSMVL 179
Query: 175 TSQMEVALSTLTACLHINELKEQVLEAFASWLRLK--HRIPGSVLASHPLVLTALSSLHS 232
++ + + + L+ ++ ++L SW+R IP + SHPL+ ++L
Sbjct: 180 DFLLQQSENQFVSPLYPHDNNRKILRCLLSWVRAGCFSEIPQGAVPSHPLLNYVFNALQG 239
Query: 233 EILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDEEDVKAI 292
+ ++ V+ EL+ T + L QV++ ++ L+ L + D+K I
Sbjct: 240 TTF-DLAIEVLVELV-----------TRHEDLPQVLLYKVQFLRDTLLKPALINADLKII 287
Query: 293 ---ARLFADMGDSYVELIATGSDESMLIVHALLEVASHP--EYDIASMTFNFWHSLQVIL 347
A L +++G + LI S E++++ A+L + P +++IA T FW + +
Sbjct: 288 SGLACLMSEIGQAAPCLIVEASSEALILTDAILSCVTFPSEDWEIADSTVQFWSTFATYI 347
Query: 348 TKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQ 389
+S G + + +R+R F + +LV + R Q
Sbjct: 348 ------LSLGG--NRQNDRTRVKDTFLPVFSALVDALVLRAQ 381
Score = 70 (29.7 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 50/241 (20%), Positives = 93/241 (38%)
Query: 516 IGAYSKWFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKL--CGYL 573
+G+YS+W S PS +L L G+S R IC+D + L
Sbjct: 500 VGSYSRWI---SVFPSNARPLLLFLAGGIS-EPICSHACASALRKICEDAPAVIQETSNL 555
Query: 574 DGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQE 633
D L + + +L+ E + L V + Q K L L L +
Sbjct: 556 DILMWIGECLEQWDLTLEDEEEVITAITVILGSVANKELQ---NKLLTQLLSSSYGVLSK 612
Query: 634 IINQGPEILQKKHPRDLTVHID-------RFAYIFRYV--NHPEA-VADA-----IQRLW 678
++++ E ++ P T + R +F ++ + P VAD + W
Sbjct: 613 LVDEDAESSGRQSPATYTRMLSSVTRGLYRIGTVFSHLATSLPSVPVADGPILSLLTVFW 672
Query: 679 PIFKAIFDIRAWDMRTMESL-CRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQ-QPCF 736
PI + +F + ++ + CRA AV++S + + ++L+ + + Q Q C+
Sbjct: 673 PILEKLFRSEHMESGSLAAAACRALSVAVQSSGEHFMLLLPSVLDCLSRNFLSFQSQECY 732
Query: 737 L 737
+
Sbjct: 733 I 733
Score = 57 (25.1 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 42/198 (21%), Positives = 75/198 (37%)
Query: 468 RPAEAALFCIRAISTYVSVVEAE------VMPQVMAXXXXXXXXXXXXXTVCL-----TI 516
R EA LF + A+S + + E E +M V A +V +
Sbjct: 442 REIEAKLFALTAVSEII-LQEGEAFDFALIMQLVSAFSVRPSSELKGFISVVYRSLADVV 500
Query: 517 GAYSKWFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKL--CGYLD 574
G+YS+W S PS +L L G+S R IC+D + LD
Sbjct: 501 GSYSRWI---SVFPSNARPLLLFLAGGIS-EPICSHACASALRKICEDAPAVIQETSNLD 556
Query: 575 GLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVITELPQVDAK-KALEMLCLPVVTPLQE 633
L + + +L ED ++ A+++++ + + + K L L L +
Sbjct: 557 ILMWIGECLEQWDLTL----EDEEEVITAITVILGSVANKELQNKLLTQLLSSSYGVLSK 612
Query: 634 IINQGPEILQKKHPRDLT 651
++++ E ++ P T
Sbjct: 613 LVDEDAESSGRQSPATYT 630
>UNIPROTKB|F1N8G5 [details] [associations]
symbol:IPO13 "Importin-13" species:9031 "Gallus gallus"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] InterPro:IPR001494 InterPro:IPR016024
Pfam:PF03810 PROSITE:PS50166 SMART:SM00913 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643
GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 IPI:IPI00595353 EMBL:AADN02012716
Ensembl:ENSGALT00000016399 ArrayExpress:F1N8G5 Uniprot:F1N8G5
Length = 955
Score = 269 (99.8 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 110/429 (25%), Positives = 202/429 (47%)
Query: 9 EALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLRSK 67
+AL+ LY+ P+ + A +WL Q + AW + LL+ D ++ F + L K
Sbjct: 20 QALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWLLLNMDKVPEIQ--YFGASALHIK 77
Query: 68 VQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGIV 127
+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + E W +
Sbjct: 78 ISRYWNDIPADQYESLKSQLFTHITRFAGGSKIVLTRLCVALASLALSMMPEAWPCA-VA 136
Query: 128 NWLRDEMNSHPEFVPG------FLELLTVLPEEVFNYKIAARPERRR-QFEKELTSQMEV 180
+ +R + V G LELLTVLPEE ++ + P+ R+ Q L +
Sbjct: 137 DMVR-MFQAEDSNVDGRARCLALLELLTVLPEE---FQTSRLPQYRKGQVRSVLAQECGS 192
Query: 181 ALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILS 236
L L + +K++VL+ F+SW++L+ IP ++ L+ A +SL L
Sbjct: 193 VFPLLEQLLQQQDSPGFIKQKVLKCFSSWVQLE--IP--LMDCENLIQAAFTSLQDPELF 248
Query: 237 EASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDVKAIAR 294
+ +V + I A VN L+++I P ++ L+ L + S D E I R
Sbjct: 249 DTAVEAVVNAISQPDAQRY----VNT-LLKLI-PPVLGLQEQLRQAVQSGDMETSHGICR 302
Query: 295 LFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDI----ASMTFNFWHSLQVI 346
+ +G+++ + + +S L +V+ ++ P Y + +S+T FW++LQ
Sbjct: 303 IAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQ-- 360
Query: 347 LTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDLKE 404
D +SF + A + QV+R Y LV ++ + Q+P D Y S ++ ++
Sbjct: 361 ----DDILSFEPDKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQ 411
Query: 405 FKHTRYDLA 413
F+ R D++
Sbjct: 412 FRIYRVDIS 420
Score = 131 (51.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 48/216 (22%), Positives = 96/216 (44%)
Query: 427 IAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSV 486
+ ++D L+ +LG + L LY K + + + W+ EA L+ ++I+ + V
Sbjct: 417 VDISDTLMYVYEMLGAEL-LSSLYDKLGR-LLTNTEQPSTWQHTEALLYGFQSIAETIDV 474
Query: 487 VEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMS 545
++V+P ++ TV TIGA S+W + P ++ +VL ++ +
Sbjct: 475 NYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL---ADHPVMINNVLPLVLQALG 531
Query: 546 TSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDS--LHLVEA 603
E + IC +C+ L Y + AV+ E +K + S + L++A
Sbjct: 532 NPE-LSISSVSTLKKICRECKYDLPPYAANI-----VAVSQEVLMKQIHKTSQCMWLMQA 585
Query: 604 LSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGP 639
L +++ L + K L L P + L+++ ++ P
Sbjct: 586 LGFLLSALQVEEILKNLHSLITPYIQQLEKLADETP 621
Score = 44 (20.5 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 694 TMESLCRACKY 704
T++ +CR CKY
Sbjct: 542 TLKKICRECKY 552
>SGD|S000005686 [details] [associations]
symbol:MTR10 "Nuclear import receptor" species:4932
"Saccharomyces cerevisiae" [GO:0051031 "tRNA transport"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0006606 "protein import into nucleus" evidence=ISS;IMP;IPI]
[GO:0008139 "nuclear localization sequence binding" evidence=IPI]
[GO:0006609 "mRNA-binding (hnRNP) protein import into nucleus"
evidence=ISS;IMP;IPI] [GO:0006403 "RNA localization" evidence=IMP]
[GO:0006404 "RNA import into nucleus" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=IEA] InterPro:IPR001494 InterPro:IPR016024
SMART:SM00913 SGD:S000005686 GO:GO:0016021 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 EMBL:BK006948 GO:GO:0008565
GO:GO:0005643 GO:GO:0008139 EMBL:U55020 InterPro:IPR013598
Pfam:PF08389 GO:GO:0006609 eggNOG:NOG237172
GeneTree:ENSGT00530000063347 EMBL:Z75068 PIR:S67048
RefSeq:NP_014803.1 ProteinModelPortal:Q99189 DIP:DIP-2358N
IntAct:Q99189 MINT:MINT-619417 STRING:Q99189 PaxDb:Q99189
PeptideAtlas:Q99189 EnsemblFungi:YOR160W GeneID:854331
KEGG:sce:YOR160W CYGD:YOR160w HOGENOM:HOG000181190 KO:K15436
OMA:TEWTSKH OrthoDB:EOG4BZR9R NextBio:976387 Genevestigator:Q99189
GermOnline:YOR160W GO:GO:0006404 GO:GO:0051031 Uniprot:Q99189
Length = 972
Score = 216 (81.1 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 110/437 (25%), Positives = 194/437 (44%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLL--HDATSNL-ETLIFCSQT 63
++ AL + + +A ++L+ FQ + AW + + +L D T+ L E IF +QT
Sbjct: 9 IETALQCISSTASQDDKNKALQFLEQFQRSTVAWSICNEILSKEDPTNALLELNIFAAQT 68
Query: 64 LRSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGG 123
LR+KV D+ +L + + +DSL TLL ++ + TQ+++A+A LA+ +W
Sbjct: 69 LRNKVTYDLSQLENNLPQ-FKDSLLTLLLSHNQ--KLIITQLNVALARLAIQFL--EWQN 123
Query: 124 GGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEK---ELTSQM-E 179
+ + +NS P + FL +LPEE + IA+ +F EL + E
Sbjct: 124 P--IFEIISLLNSSPSILLNFLR---ILPEETLD--IASTSLTEVEFNSRIHELIDPIAE 176
Query: 180 VALSTLTACLHI------NELK----EQVLEAFASWLRLKHRIP-GSVLASHPLVLTALS 228
L L +C+ + N EQ+L SW + P +L PL+
Sbjct: 177 DVLKFLVSCIDLLQNTDGNSSSSISLEQILRCLNSW---SYEFPVEQLLTVQPLINLVFE 233
Query: 229 SLHSEILSEASVNVISELIH-YSAAGSSGGATVNMPLIQVIVPQIMSLKAHL-----TDS 282
++ + +E+ + I T N LI + Q+M L+ L TD
Sbjct: 234 TISNG--NESDMEAFDSAIDCLCVILRESRDTTNEQLISALFHQLMLLQEKLLPTLFTDH 291
Query: 283 S-KDEED---VKAIARLFADMGDSYVELIATGSD--ESMLIVHALLEVASHPEYDIASMT 336
DE D ++ + RLF + G+++ +I+ D + M++V +L + + D+ S T
Sbjct: 292 PLNDEYDDDLLEGMTRLFVEAGEAWSVVISKNPDFFKPMVLVLLML-TCKNEDLDVVSYT 350
Query: 337 FNFWHSL-QVILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQ 395
F FW + Q ++ R Y + SR+ + + L++ + +QYP Q
Sbjct: 351 FPFWFNFKQSLVLPR--Y-----------QESRK--AYSDIFVKLINGIITHLQYPSG-Q 394
Query: 396 DLSLEDLKEFKHTRYDL 412
S E+ +FK RY +
Sbjct: 395 FSSKEEEDKFKDFRYHM 411
Score = 172 (65.6 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 64/297 (21%), Positives = 116/297 (39%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
+ DVL D +V+G L I+ + +N W+ EA LF +R ++ +S+ E
Sbjct: 411 MGDVLKDCTAVVGTSEALSQPLIRIKSAI----ENNNSWQIMEAPLFSLRTMAKEISLTE 466
Query: 489 AEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSE 548
++P+++ L +G Y++W + P +L L + +G E
Sbjct: 467 NTILPEIIKIICNLPEQAKIRYASTLVLGRYTEW---TAKHPELLEVQLQYIFNGFQLHE 523
Query: 549 DTX------XXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVE 602
+ C DC K L GY+D L N + +N + S+ + E L +
Sbjct: 524 GSSDMQSIITASSHALMFFCSDCSKLLVGYIDQLINFF---LNVQSSIDI--ESQFELCQ 578
Query: 603 ALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQ---GPEILQKKHPRDLTVHIDRFAY 659
LS VI P+ + L + ++ +I Q P +L + + + F
Sbjct: 579 GLSAVINNQPEAKVSVIFQKLVDDNLRQIEALIPQWKANPTLLAPQIADKIDLLYALFEE 638
Query: 660 IFRYVNHP----EAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRF 712
+ N+P E + I+ +W + + + A M + R K R +RF
Sbjct: 639 LKPRYNYPQQGSEPLLPRIEFIWKALRTLL-VDAGAMTDSIIVERVAKLLRRIFERF 694
>UNIPROTKB|Q5ZIC8 [details] [associations]
symbol:IPO13 "Importin-13" species:9031 "Gallus gallus"
[GO:0015031 "protein transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR016024 PROSITE:PS50166 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 PROSITE:PS50077 GO:GO:0015031 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 CTD:9670 HOGENOM:HOG000049153
HOVERGEN:HBG052141 OrthoDB:EOG4K6G3G EMBL:AJ720856 IPI:IPI00595353
RefSeq:NP_001006537.1 UniGene:Gga.22612 ProteinModelPortal:Q5ZIC8
STRING:Q5ZIC8 GeneID:424573 KEGG:gga:424573 NextBio:20826891
Uniprot:Q5ZIC8
Length = 958
Score = 249 (92.7 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 111/431 (25%), Positives = 199/431 (46%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL+ D ++ T R
Sbjct: 21 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWLLLNMDKVPEIQYSAPAPCTSR 80
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
S LP + L+ L T + +F G V T++ +A+A+LA+ + E W
Sbjct: 81 SPAT-GTTSLPDQ-YESLKSQLFTHITRFAGGSKIVLTRLCVALASLALSMMPEAWPCA- 137
Query: 126 IVNWLRDEMNSHPEFVPG------FLELLTVLPEEVFNYKIAARPERRR-QFEKELTSQM 178
+ + +R + V G LELLTVLPEE ++ + P+ R+ Q L +
Sbjct: 138 VADMVR-MFQAEDSNVDGRARCLALLELLTVLPEE---FQTSRLPQYRKGQVRSVLAQEC 193
Query: 179 EVALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEI 234
L L + +K++VL+ F+SW++L+ IP ++ L+ A +SL
Sbjct: 194 GSVFPLLEQLLQQQDSPGFIKQKVLKCFSSWVQLE--IP--LMDCENLIQAAFTSLQDPE 249
Query: 235 LSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDVKAI 292
L + +V + I A VN L+++I P ++ L+ L + S D E I
Sbjct: 250 LFDTAVEAVVNAISQPDAQRY----VNT-LLKLI-PPVLGLQEQLRQAVQSGDMETSHGI 303
Query: 293 ARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDI----ASMTFNFWHSLQ 344
R+ +G+++ + + +S L +V+ ++ P Y + +S+T FW++LQ
Sbjct: 304 CRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQ 363
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
D +SF + A + QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 364 ------DDILSFEPDKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 412
Query: 403 KEFKHTRYDLA 413
++F+ R D++
Sbjct: 413 EQFRIYRVDIS 423
Score = 131 (51.2 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 48/216 (22%), Positives = 96/216 (44%)
Query: 427 IAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSV 486
+ ++D L+ +LG + L LY K + + + W+ EA L+ ++I+ + V
Sbjct: 420 VDISDTLMYVYEMLGAEL-LSSLYDKLGR-LLTNTEQPSTWQHTEALLYGFQSIAETIDV 477
Query: 487 VEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMS 545
++V+P ++ TV TIGA S+W + P ++ +VL ++ +
Sbjct: 478 NYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL---ADHPVMINNVLPLVLQALG 534
Query: 546 TSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDS--LHLVEA 603
E + IC +C+ L Y + AV+ E +K + S + L++A
Sbjct: 535 NPE-LSISSVSTLKKICRECKYDLPPYAANI-----VAVSQEVLMKQIHKTSQCMWLMQA 588
Query: 604 LSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGP 639
L +++ L + K L L P + L+++ ++ P
Sbjct: 589 LGFLLSALQVEEILKNLHSLITPYIQQLEKLADETP 624
Score = 44 (20.5 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 694 TMESLCRACKY 704
T++ +CR CKY
Sbjct: 545 TLKKICRECKY 555
>UNIPROTKB|F1P2X5 [details] [associations]
symbol:IPO13 "Importin-13" species:9031 "Gallus gallus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR016024
SUPFAM:SSF48371 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 EMBL:AADN02012716 IPI:IPI00923818
Ensembl:ENSGALT00000038539 ArrayExpress:F1P2X5 Uniprot:F1P2X5
Length = 934
Score = 235 (87.8 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 111/430 (25%), Positives = 197/430 (45%)
Query: 9 EALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIF-CSQTLRS 66
+AL+ LY+ P+ + A +WL Q + AW + LL+ D ++ C T RS
Sbjct: 1 QALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWLLLNMDKVPEIQYAPAPC--TSRS 58
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
LP L+ L T + +F G V T++ +A+A+LA+ + E W +
Sbjct: 59 PAT-GTTSLPQ--YESLKSQLFTHITRFAGGSKIVLTRLCVALASLALSMMPEAWPCA-V 114
Query: 127 VNWLRDEMNSHPEFVPG------FLELLTVLPEEVFNYKIAARPERRR-QFEKELTSQME 179
+ +R + V G LELLTVLPEE ++ + P+ R+ Q L +
Sbjct: 115 ADMVR-MFQAEDSNVDGRARCLALLELLTVLPEE---FQTSRLPQYRKGQVRSVLAQECG 170
Query: 180 VALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEIL 235
L L + +K++VL+ F+SW++L+ IP ++ L+ A +SL L
Sbjct: 171 SVFPLLEQLLQQQDSPGFIKQKVLKCFSSWVQLE--IP--LMDCENLIQAAFTSLQDPEL 226
Query: 236 SEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDVKAIA 293
+ +V + I A VN L+++I P ++ L+ L + S D E I
Sbjct: 227 FDTAVEAVVNAISQPDAQRY----VNT-LLKLI-PPVLGLQEQLRQAVQSGDMETSHGIC 280
Query: 294 RLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDI----ASMTFNFWHSLQV 345
R+ +G+++ + + +S L +V+ ++ P Y + +S+T FW++LQ
Sbjct: 281 RIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQ- 339
Query: 346 ILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDLK 403
D +SF + A + QV+R Y LV ++ + Q+P D Y S ++ +
Sbjct: 340 -----DDILSFEPDKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKE 389
Query: 404 EFKHTRYDLA 413
+F+ R D++
Sbjct: 390 QFRIYRVDIS 399
Score = 131 (51.2 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 48/216 (22%), Positives = 96/216 (44%)
Query: 427 IAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSV 486
+ ++D L+ +LG + L LY K + + + W+ EA L+ ++I+ + V
Sbjct: 396 VDISDTLMYVYEMLGAEL-LSSLYDKLGR-LLTNTEQPSTWQHTEALLYGFQSIAETIDV 453
Query: 487 VEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMS 545
++V+P ++ TV TIGA S+W + P ++ +VL ++ +
Sbjct: 454 NYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL---ADHPVMINNVLPLVLQALG 510
Query: 546 TSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDS--LHLVEA 603
E + IC +C+ L Y + AV+ E +K + S + L++A
Sbjct: 511 NPE-LSISSVSTLKKICRECKYDLPPYAANI-----VAVSQEVLMKQIHKTSQCMWLMQA 564
Query: 604 LSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGP 639
L +++ L + K L L P + L+++ ++ P
Sbjct: 565 LGFLLSALQVEEILKNLHSLITPYIQQLEKLADETP 600
Score = 44 (20.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 694 TMESLCRACKY 704
T++ +CR CKY
Sbjct: 521 TLKKICRECKY 531
>ASPGD|ASPL0000002597 [details] [associations]
symbol:kapF species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IDA;IMP] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR016024
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:BN001301
InterPro:IPR013598 Pfam:PF08389 EnsemblFungi:CADANIAT00007527
OMA:STICRET Uniprot:C8V1X4
Length = 761
Score = 195 (73.7 bits), Expect = 7.2e-24, Sum P(2) = 7.2e-24
Identities = 66/253 (26%), Positives = 124/253 (49%)
Query: 197 QVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNVISELIHYSAAGSSG 256
++L+ SW+R IP S + PL+ + +L + +A+V+ + L +
Sbjct: 19 RLLDCITSWMR---EIPASKIVESPLMDVIVKALDDDASFDAAVDSMCTLYRDTREVDD- 74
Query: 257 GATVNMPLIQVIVPQIMSLKAHLTD--SSKDEEDVKAIARLFADMGDSYVELIATGSDES 314
++PLIQ + P++MSL+ + + ++D E + I RLFA+ G+++V LIA +
Sbjct: 75 ----SLPLIQALFPRVMSLRPKIAEFAEAEDTEAFRGITRLFAEAGEAWVVLIARMPAQF 130
Query: 315 MLIVHALLEVASHP-EYDIASMTFNFWHSLQVILTKRDSYISFGNEASAEAERSRRLQVF 373
+V A+LE + E D+ S+TF FW+ L+ Y++ A + A V+
Sbjct: 131 RELVEAVLECCARDWERDVVSITFVFWYELK-------QYVTLERYAESRA-------VY 176
Query: 374 RSAYESLVSLVSFRVQYP--QDYQ-DL---SLEDLKEFKHTRYDLACCSSSTLTESVMLI 427
+ LV ++ ++YP +D + DL E ++F+ R+ + L + ++I
Sbjct: 177 SDVFSRLVDIMIKHLEYPRPEDGESDLFGGDREQEEKFRQFRHSMG----DVLKDCCVVI 232
Query: 428 AVADVLIDAASVL 440
VA+ L A V+
Sbjct: 233 GVAECLSKAYQVI 245
Score = 166 (63.5 bits), Expect = 7.2e-24, Sum P(2) = 7.2e-24
Identities = 54/251 (21%), Positives = 108/251 (43%)
Query: 428 AVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNE-----WRPAEAALFCIRAIST 482
++ DVL D V+G L Y + ++ ++ + W+ EA LF +RA+
Sbjct: 220 SMGDVLKDCCVVIGVAECLSKAYQVIQQWISQYASQSTDEHVPNWQELEAPLFSLRAMGR 279
Query: 483 YVSVVEAEVMPQVMAXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTS 542
V E+ V+PQV+ + + Y++W + P L + L+ + S
Sbjct: 280 MVDPEESAVLPQVIPLIVQIPNQEKVRFQAIMALARYTEW---TAQHPETLEAQLNYVIS 336
Query: 543 GMSTSE-DTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLV 601
G S + F+ + DC+K L G++ L++ Y + ++ LK S+++ +
Sbjct: 337 GFQHSSIEVVQASALAFKFLGTDCQKLLGGHIAQLHSFYESVID---KLKPSSQEEV--T 391
Query: 602 EALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIF 661
E ++ V+ P + ++M C P++ + + N + ++ R + H+ IF
Sbjct: 392 EGVAAVVAVQPLEKIYETMKMFCDPIMARIMNLANNAKD---EQGQRAVADHLQLIT-IF 447
Query: 662 RYVNHPEAVAD 672
V +P D
Sbjct: 448 ILVVNPYVAQD 458
>UNIPROTKB|F1M8G7 [details] [associations]
symbol:Ipo13 "Importin-13" species:10116 "Rattus
norvegicus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] InterPro:IPR001494
InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166 SMART:SM00913
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005643 GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 IPI:IPI00203944
Ensembl:ENSRNOT00000026844 ArrayExpress:F1M8G7 Uniprot:F1M8G7
Length = 964
Score = 234 (87.4 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 105/430 (24%), Positives = 198/430 (46%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASALH 83
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 84 IKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA- 142
Query: 126 IVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEK-ELTSQME 179
+ + +R + P G LELLTVLPEE ++ + P+ R+ + L +
Sbjct: 143 VADMVRLFQAEDSPVDSQGRCLALLELLTVLPEE---FQTSRLPQYRKGLVRASLAVECG 199
Query: 180 VALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEIL 235
L L ++++VL+ F+SW++L+ +P + L+ A ++L L
Sbjct: 200 AVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLE--VP--LQDCEALIQAAFAALQDSEL 255
Query: 236 SEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEEDVKAIA 293
++SV I I A VN L+++I P ++ L+ L + + D E I
Sbjct: 256 FDSSVEAIVNAISQPDAQRY----VNT-LLKLI-PLVLGLQEQLRQAVQNGDMETSHGIC 309
Query: 294 RLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDI----ASMTFNFWHSLQV 345
R+ +G+++ + + +S L +V+ ++ P Y + +S+T FW++LQ
Sbjct: 310 RIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQA 369
Query: 346 ILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDLK 403
E A + QV+R Y LV ++ + Q+P D Y S ++ +
Sbjct: 370 -------------EKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKE 411
Query: 404 EFKHTRYDLA 413
+F+ R D++
Sbjct: 412 QFRIYRVDIS 421
Score = 123 (48.4 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 86/410 (20%), Positives = 168/410 (40%)
Query: 371 QVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDLKEFKHTRYDLACCSSSTLTESVMLIA 428
QV+R Y LV ++ + Q+P D Y S ++ ++F+ R D
Sbjct: 377 QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVD----------------- 419
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
++D L+ +LG + L LY K + ++ W+ EA L+ ++I+ + V
Sbjct: 420 ISDTLMYVYEMLGAEL-LSNLYDKLGRLLTSSEEPYS-WQHTEALLYGFQSIAETIDVNY 477
Query: 489 AEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTS 547
++V+P ++ TV TIGA S+W + P ++ SVL ++ +
Sbjct: 478 SDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL---ADHPVMINSVLPLVLHALGNP 534
Query: 548 EDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGE---GSLKVSAEDSL-HLVEA 603
E + IC +C+ L Y + V + + + S + +L L+ A
Sbjct: 535 E-LSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSA 593
Query: 604 LSM--VITELPQVDAK--KALEMLCLPVVTPLQEI-INQGPEILQKKHPR-DLTVHIDRF 657
L + ++ L + + + LE L + P ++ I +L D++ H D
Sbjct: 594 LQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDVSHHEDDH 653
Query: 658 -AYIFRYVNHPEAVADAIQRLWPIFKAIFDIRA-W--DMRTMESLCRACKYAVRTSKRFM 713
R + P+ + L +F+ I + + W D + +E++C + +V+T
Sbjct: 654 EGPELRKLPVPQGPNPVVVVLQQVFQLIQKVLSKWLSDAQVVEAVCAIFEKSVKTLLDDF 713
Query: 714 GITIGAILEEIQGLYQQHQQPCFLYLSSEVIKVV------FPP-EVLALI 756
+ + E + +Y Q L L+ +++ + FPP E L L+
Sbjct: 714 APMVPQLCEMLGRMYSTVPQASALDLTRQLVHIFAHEPAHFPPIEALFLL 763
>UNIPROTKB|O94829 [details] [associations]
symbol:IPO13 "Importin-13" species:9606 "Homo sapiens"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 EMBL:CH471059 GO:GO:0008565
GO:GO:0005643 GO:GO:0006606 EMBL:AL357079 PDB:2X19 PDBsum:2X19
InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172 CTD:9670
HOVERGEN:HBG052141 OMA:VDGRARC OrthoDB:EOG4K6G3G EMBL:AF267987
EMBL:AB018267 EMBL:BC008194 EMBL:AL117501 EMBL:AK023441
IPI:IPI00005651 PIR:T17276 RefSeq:NP_055467.3 UniGene:Hs.158497
PDB:2XWU PDBsum:2XWU ProteinModelPortal:O94829 SMR:O94829
IntAct:O94829 MINT:MINT-1465082 STRING:O94829 PhosphoSite:O94829
PaxDb:O94829 PRIDE:O94829 Ensembl:ENST00000372343 GeneID:9670
KEGG:hsa:9670 UCSC:uc001ckx.3 GeneCards:GC01P044412 HGNC:HGNC:16853
MIM:610411 neXtProt:NX_O94829 PharmGKB:PA134981096
InParanoid:O94829 PhylomeDB:O94829 ChiTaRS:IPO13
EvolutionaryTrace:O94829 GenomeRNAi:9670 NextBio:36311
ArrayExpress:O94829 Bgee:O94829 CleanEx:HS_IPO13
Genevestigator:O94829 GermOnline:ENSG00000117408 Uniprot:O94829
Length = 963
Score = 275 (101.9 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 180/796 (22%), Positives = 337/796 (42%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASALH 83
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 84 IKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA- 142
Query: 126 IVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
+ + +R + P G LELLTVLPEE ++ + P Q+ K L V
Sbjct: 143 VADMVRLFQAEDSPVDGQGRCLALLELLTVLPEE---FQTSRLP----QYRKGL-----V 190
Query: 181 ALSTLTACLHINELKEQVLEAFASWLRLKHRI----PGSVLASHPL------VLTALSSL 230
S C + L EQ+L+ +S ++ ++ V PL + A ++L
Sbjct: 191 RTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAAL 250
Query: 231 HSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEED 288
L ++SV I I A VN L+++I P ++ L+ L + + D E
Sbjct: 251 QDSELFDSSVEAIVNAISQPDAQRY----VNT-LLKLI-PLVLGLQEQLRQAVQNGDMET 304
Query: 289 VKAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDIASMTFNFWHSLQ 344
I R+ +G+++ + + +S L +V+ ++ P Y + T + +L
Sbjct: 305 SHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSL--TLT 362
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
T +D +SF EA +A QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 363 FWYTLQDDILSF--EAEKQAVYQ---QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAEL-LSNLYDKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYR 581
W + P ++ SVL ++ + E + IC +C+ L Y + V +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPE-LSVSSVSTLKKICRECKYDLPPYAANIVAVSQ 574
Query: 582 TAVNGE---GSLKVSAEDSL-HLVEALSM--VITELPQVDAK--KALEMLCLPVVTPLQE 633
+ + S + +L L+ AL + ++ L + + + LE L + P +
Sbjct: 575 DVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNK 634
Query: 634 I-INQGPEILQKKHPR-DLTVHIDRF-AYIFRYVNHPEAVADAIQRLWPIFKAIFDIRA- 689
+ I +L D++ H D R + P+ + L +F+ I + +
Sbjct: 635 LAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVLSK 694
Query: 690 W--DMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFLYLSSEVIKVV 747
W D + +E++C + +V+T + + E + +Y Q L L+ +++ +
Sbjct: 695 WLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIF 754
Query: 748 ------FPP-EVLALI 756
FPP E L L+
Sbjct: 755 AHEPAHFPPIEALFLL 770
>UNIPROTKB|I3LVG1 [details] [associations]
symbol:LOC100624339 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643 InterPro:IPR013598
Pfam:PF08389 GeneTree:ENSGT00530000063347 OMA:VDGRARC EMBL:FP475997
RefSeq:XP_003356535.1 Ensembl:ENSSSCT00000025206 GeneID:100624339
KEGG:ssc:100624339 Uniprot:I3LVG1
Length = 963
Score = 275 (101.9 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 180/796 (22%), Positives = 337/796 (42%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASALH 83
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 84 IKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA- 142
Query: 126 IVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
+ + +R + P G LELLTVLPEE ++ + P Q+ K L V
Sbjct: 143 VADMVRLFQAEDSPVDGQGRCLALLELLTVLPEE---FQTSRLP----QYRKSL-----V 190
Query: 181 ALSTLTACLHINELKEQVLEAFASWLRLKHRI----PGSVLASHPL------VLTALSSL 230
S C + L EQ+L+ +S ++ ++ V PL + A S+L
Sbjct: 191 RASLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFSAL 250
Query: 231 HSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEED 288
L ++SV I I A VN L+++I P ++ L+ L + + D E
Sbjct: 251 QDSELFDSSVEAIVNAISQPDAQRY----VNT-LLKLI-PLVLGLQDQLRQAVQNGDMET 304
Query: 289 VKAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDIASMTFNFWHSLQ 344
I R+ +G+++ + + +S L +V+ ++ P + + T + +L
Sbjct: 305 SHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHFPVNETTSSL--TLT 362
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
T +D +SF EA +A QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 363 FWYTLQDDILSF--EAEKQAVYQ---QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAEL-LSSLYDKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYR 581
W + P ++ SVL ++ + E + IC +C+ L Y + V +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPE-LSISSVSTLKKICRECKYDLPPYAANIVAVSQ 574
Query: 582 TAVNGE---GSLKVSAEDSL-HLVEALSM--VITELPQVDAK--KALEMLCLPVVTPLQE 633
+ + S + +L L+ AL + ++ L + + + LE L + P +
Sbjct: 575 DVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNK 634
Query: 634 I-INQGPEILQKKHPR-DLTVHIDRF-AYIFRYVNHPEAVADAIQRLWPIFKAIFDIRA- 689
+ I +L D++ H D R + P+ + L +F+ I + +
Sbjct: 635 LAIVHILGLLSNLFTTLDVSHHDDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVLSK 694
Query: 690 W--DMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFLYLSSEVIKVV 747
W D + +E++C + +V+T + + E + +Y Q L L+ +++ +
Sbjct: 695 WLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIF 754
Query: 748 ------FPP-EVLALI 756
FPP E L L+
Sbjct: 755 AHEPAHFPPIEALFLL 770
>UNIPROTKB|A7YWD2 [details] [associations]
symbol:IPO13 "Importin-13" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0008565 GO:GO:0005643
GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
EMBL:BC134514 IPI:IPI00685387 RefSeq:NP_001098860.1 UniGene:Bt.7175
STRING:A7YWD2 Ensembl:ENSBTAT00000025142 GeneID:523399
KEGG:bta:523399 CTD:9670 GeneTree:ENSGT00530000063347
HOGENOM:HOG000049153 HOVERGEN:HBG052141 InParanoid:A7YWD2
OMA:VDGRARC OrthoDB:EOG4K6G3G NextBio:20873732 Uniprot:A7YWD2
Length = 963
Score = 274 (101.5 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 179/796 (22%), Positives = 337/796 (42%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQASPQAWHFSWQLLQPDKVPEIQ--YFGASALH 83
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 84 IKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA- 142
Query: 126 IVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
+ + +R + P G LELLTVLPEE ++ + P Q+ K L V
Sbjct: 143 VADMVRLFQAEDSPVDSQGRCLALLELLTVLPEE---FQTSRLP----QYRKSL-----V 190
Query: 181 ALSTLTACLHINELKEQVLEAFASWLRLKHRI----PGSVLASHPL------VLTALSSL 230
S C + L EQ+L+ +S ++ ++ V PL + A ++L
Sbjct: 191 RTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAAL 250
Query: 231 HSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEED 288
L ++SV I I A VN L+++I P ++ L+ L + + D E
Sbjct: 251 QDSELFDSSVEAIVNAISQPDAQRY----VNT-LLKLI-PLVLGLQDQLRQAVQNGDMET 304
Query: 289 VKAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDIASMTFNFWHSLQ 344
I R+ +G+++ + + +S L +V+ ++ P + + T + +L
Sbjct: 305 SHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHFPVNETTSSL--TLT 362
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
T +D +SF EA +A QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 363 FWYTLQDDILSF--EAEKQAVYQ---QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAEL-LSNLYDKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYR 581
W + P ++ SVL ++ + E + IC +C+ L Y + V +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPE-LSISSVSTLKKICRECKYDLPPYAANIVAVSQ 574
Query: 582 TAVNGE---GSLKVSAEDSL-HLVEALSM--VITELPQVDAK--KALEMLCLPVVTPLQE 633
+ + S + +L L+ AL + ++ L + + + LE L + P +
Sbjct: 575 DVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNK 634
Query: 634 I-INQGPEILQKKHPR-DLTVHIDRF-AYIFRYVNHPEAVADAIQRLWPIFKAIFDIRA- 689
+ I +L D++ H D R + P+ + L +F+ I + +
Sbjct: 635 LAIVHILGLLSNLFTTLDVSHHEDDHEGSELRKLPVPQGPNPVVVVLQQVFQLIQKVLSK 694
Query: 690 W--DMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFLYLSSEVIKVV 747
W D + +E++C + +V+T + + E + +Y Q L L+ +++ +
Sbjct: 695 WLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIF 754
Query: 748 ------FPP-EVLALI 756
FPP E L L+
Sbjct: 755 AHEPAHFPPIEALFLL 770
>MGI|MGI:2385205 [details] [associations]
symbol:Ipo13 "importin 13" species:10090 "Mus musculus"
[GO:0002147 "glucocorticoid receptor import into nucleus"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006606 "protein import
into nucleus" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0035259
"glucocorticoid receptor binding" evidence=ISO] InterPro:IPR001494
InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166 SMART:SM00913
MGI:MGI:2385205 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0008565 GO:GO:0005643
GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
CTD:9670 GeneTree:ENSGT00530000063347 HOGENOM:HOG000049153
HOVERGEN:HBG052141 OMA:VDGRARC OrthoDB:EOG4K6G3G EMBL:AK129200
EMBL:BC031823 EMBL:AK052257 IPI:IPI00169541 IPI:IPI00453577
RefSeq:NP_666264.1 UniGene:Mm.287810 ProteinModelPortal:Q8K0C1
SMR:Q8K0C1 STRING:Q8K0C1 PhosphoSite:Q8K0C1 PaxDb:Q8K0C1
PRIDE:Q8K0C1 Ensembl:ENSMUST00000036156 GeneID:230673
KEGG:mmu:230673 NextBio:380039 Bgee:Q8K0C1 CleanEx:MM_IPO13
Genevestigator:Q8K0C1 GermOnline:ENSMUSG00000033365 Uniprot:Q8K0C1
Length = 963
Score = 274 (101.5 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 180/796 (22%), Positives = 337/796 (42%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 26 VEKALHQLYYDPNIDNKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASALH 83
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 84 IKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA- 142
Query: 126 IVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
+ + +R + P G LELLTVLPEE ++ + P Q+ K L V
Sbjct: 143 VADMVRLFQAEDSPVDSQGRCLALLELLTVLPEE---FQTSRLP----QYRKGL-----V 190
Query: 181 ALSTLTACLHINELKEQVLEAFASWLRLKHRI----PGSVLASHPL------VLTALSSL 230
S C + L EQ+L+ +S ++ ++ V PL + A ++L
Sbjct: 191 RTSLAVECGTVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAAL 250
Query: 231 HSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEED 288
L ++SV I I A VN L+++I P ++ L+ L + + D E
Sbjct: 251 QDSELFDSSVEAIVNAISQPDAQRY----VNT-LLKLI-PLVLGLQEQLRQAVQNGDMET 304
Query: 289 VKAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDIASMTFNFWHSLQ 344
I R+ +G+++ + + +S L +V+ ++ P Y + T + +L
Sbjct: 305 SHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSL--TLT 362
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
T +D +SF EA +A QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 363 FWYTLQDDILSF--EAEKQAVYQ---QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAEL-LSNLYDKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYR 581
W + P ++ SVL ++ + E + IC +C+ L Y + V +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPE-LSVSSVSTLKKICRECKYDLPPYAANIVAVSQ 574
Query: 582 TAVNGE---GSLKVSAEDSL-HLVEALSM--VITELPQVDAK--KALEMLCLPVVTPLQE 633
+ + S + +L L+ AL + ++ L + + + LE L + P +
Sbjct: 575 DVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNK 634
Query: 634 I-INQGPEILQKKHPR-DLTVHIDRF-AYIFRYVNHPEAVADAIQRLWPIFKAIFDIRA- 689
+ I +L D++ H D R + P+ + L +F+ I + +
Sbjct: 635 LAIVHILGLLSNLFTTLDVSHHEDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVLSK 694
Query: 690 W--DMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFLYLSSEVIKVV 747
W D + +E++C + +V+T + + E + +Y Q L L+ +++ +
Sbjct: 695 WLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTVPQASALDLTRQLVHIF 754
Query: 748 ------FPP-EVLALI 756
FPP E L L+
Sbjct: 755 AHEPAHFPPIEALFLL 770
>UNIPROTKB|E2RK88 [details] [associations]
symbol:IPO13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0005643 GO:GO:0006606 InterPro:IPR013598
Pfam:PF08389 CTD:9670 GeneTree:ENSGT00530000063347 OMA:VDGRARC
EMBL:AAEX03009804 RefSeq:XP_532612.2 Ensembl:ENSCAFT00000007856
GeneID:475388 KEGG:cfa:475388 NextBio:20851235 Uniprot:E2RK88
Length = 963
Score = 271 (100.5 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 180/796 (22%), Positives = 336/796 (42%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASALH 83
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ R ++P++ L+ L T + F G V T++ +A+A+LA+ + + W
Sbjct: 84 IKISRYWSDIPTDQYESLKAQLFTQITHFASGSKIVLTRLCVALASLALSMMPDAWPCA- 142
Query: 126 IVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
+ + +R + P G LELLTVLPEE ++ + P Q+ K L V
Sbjct: 143 VADMVRLFQAEDSPVDGQGRCLALLELLTVLPEE---FQTSRLP----QYRKGL-----V 190
Query: 181 ALSTLTACLHINELKEQVLEAFASWLRLKHRI----PGSVLASHPL------VLTALSSL 230
S C + L EQ+L+ +S ++ ++ V PL + A ++L
Sbjct: 191 RASLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAAL 250
Query: 231 HSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEED 288
L ++SV I I A VN L+++I P ++ L+ L + + D E
Sbjct: 251 QDSELFDSSVEAIVNAISQPDAQRY----VNT-LLKLI-PLVLGLQDQLRQAVQNGDMET 304
Query: 289 VKAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDIASMTFNFWHSLQ 344
I R+ +G+++ + + +S L +V+ ++ P Y + T + +L
Sbjct: 305 SHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSL--TLT 362
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
T +D +SF EA +A QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 363 FWYTLQDDILSF--EAEKQAVYQ---QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAEL-LSNLYEKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYR 581
W + P ++ SVL ++ + E + IC +C+ L Y + V +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPE-LSVSSVSTLKKICRECKYDLPPYAANIVAVSQ 574
Query: 582 TAVNGE---GSLKVSAEDSL-HLVEALSM--VITELPQVDAK--KALEMLCLPVVTPLQE 633
+ + S + +L L+ AL + ++ L + + + LE L + P +
Sbjct: 575 DVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNK 634
Query: 634 I-INQGPEILQKKHPR-DLTVHIDRF-AYIFRYVNHPEAVADAIQRLWPIFKAIFDIRA- 689
+ I +L D++ H D R + P+ + L +F+ I + +
Sbjct: 635 LAIVHILGLLSNLFTTLDVSHHEDDHEGSELRKLPVPQGPNPVVVVLQQVFQLIQKVLSK 694
Query: 690 W--DMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFLYLSSEVIKVV 747
W D + +E++C + +V+T + + E + +Y Q L L+ +++ +
Sbjct: 695 WLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIF 754
Query: 748 ------FPP-EVLALI 756
FPP E L L+
Sbjct: 755 AHEPAHFPPIEALFLL 770
>RGD|620071 [details] [associations]
symbol:Ipo13 "importin 13" species:10116 "Rattus norvegicus"
[GO:0002147 "glucocorticoid receptor import into nucleus"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006606 "protein import into nucleus" evidence=ISO] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0035259
"glucocorticoid receptor binding" evidence=IPI] [GO:0042564
"NLS-dependent protein nuclear import complex" evidence=NAS]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 RGD:620071 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0008565 GO:GO:0005643 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 CTD:9670 HOGENOM:HOG000049153
HOVERGEN:HBG052141 OrthoDB:EOG4K6G3G EMBL:AF110195 IPI:IPI00203944
RefSeq:NP_446230.1 UniGene:Rn.14252 ProteinModelPortal:Q9JM04
STRING:Q9JM04 PRIDE:Q9JM04 GeneID:116458 KEGG:rno:116458
InParanoid:Q9JM04 NextBio:618970 ArrayExpress:Q9JM04
Genevestigator:Q9JM04 GermOnline:ENSRNOG00000019758 GO:GO:0042564
GO:GO:0002147 Uniprot:Q9JM04
Length = 963
Score = 270 (100.1 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 177/803 (22%), Positives = 336/803 (41%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTLR 65
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASALH 83
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ R ++P++ L+ T + +F G V T++ +A+A+LA+ + + W
Sbjct: 84 IKISRYWSDIPTDQYESLKAHSFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA- 142
Query: 126 IVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
+ + +R + P G LELLTVLPEE ++ + P Q+ K L V
Sbjct: 143 VADMVRLFQAEDSPVDSQGRCLALLELLTVLPEE---FQTSRLP----QYRKGL-----V 190
Query: 181 ALSTLTACLHINELKEQVLEAFASWLRLKHRI----PGSVLASHPL------VLTALSSL 230
S C + L EQ+L+ +S ++ ++ V PL + A ++L
Sbjct: 191 RASLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAAL 250
Query: 231 HSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSK--DEED 288
L ++SV I I A VN L+++I P ++ L+ L + + D E
Sbjct: 251 QDSELFDSSVEAIVNAISQPDAQRY----VNT-LLKLI-PLVLGLQEQLRQAVQNGDMET 304
Query: 289 VKAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHP-EYDIASMTFNFWHSLQ 344
I R+ +G+++ + + +S L +V+ ++ P Y + T + +L
Sbjct: 305 SHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSL--TLT 362
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
T +D +SF EA +A QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 363 FWYTLQDDILSF--EAEKQAVYQ---QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAEL-LSNLYDKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMAXX-XXXXXXXXXXXTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLY---- 577
W + P ++ SVL ++ + E + IC +C+ +L Y +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPE-LSVSSVSTLKKICRECKYELPPYAANIVAVSQ 574
Query: 578 -----NVYRTA-----VNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLP- 626
+++T+ + G L + + +L S++ T + Q++ K E + P
Sbjct: 575 DVLMKQIHKTSQCMWLMQALGFLLSALQVEENLKNLHSLISTYIQQLE--KLAEEIPKPS 632
Query: 627 ---VVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVNHPEAVADAIQRLWPIFKA 683
+ + +++ L H D D R + P+ + L +F+
Sbjct: 633 NKLAIVHILGLLSNLFTTLDVSHHED-----DHEGPELRKLPVPQGPNPVVVVLQQVFQL 687
Query: 684 IFDIRA-W--DMRTMESLCRACKYAVRTSKRFMGITIGAILEEIQGLYQQHQQPCFLYLS 740
I + + W D + +E++C + +V+T + + E + +Y Q L L+
Sbjct: 688 IQKVLSKWLSDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTVPQASALDLT 747
Query: 741 SEVIKVV------FPP-EVLALI 756
+++ + FPP E L L+
Sbjct: 748 RQLVHIFAHEPAHFPPIEALFLL 770
>FB|FBgn0261532 [details] [associations]
symbol:cdm "cadmus" species:7227 "Drosophila melanogaster"
[GO:0007270 "neuron-neuron synaptic transmission" evidence=IMP]
[GO:0042331 "phototaxis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810
PROSITE:PS50166 SMART:SM00913 EMBL:AE014297 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0007270 GO:GO:0042331 GO:GO:0005643 GO:GO:0050804
InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
GeneTree:ENSGT00530000063347 OMA:VDGRARC PDB:2X1G PDBsum:2X1G
EMBL:AY061428 RefSeq:NP_650682.1 UniGene:Dm.7262 SMR:Q9VEC5
MINT:MINT-834899 STRING:Q9VEC5 EnsemblMetazoa:FBtr0083619
GeneID:42171 KEGG:dme:Dmel_CG7212 UCSC:CG7212-RA CTD:12582
FlyBase:FBgn0261532 InParanoid:Q9VEC5 OrthoDB:EOG4V9S5H
EvolutionaryTrace:Q9VEC5 GenomeRNAi:42171 NextBio:827492
Uniprot:Q9VEC5
Length = 971
Score = 171 (65.3 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 65/292 (22%), Positives = 124/292 (42%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVE 488
++D + VL D L+IL E +A W EA ++ ++++ + E
Sbjct: 441 ISDTFMYCYDVLN-DYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEE 499
Query: 489 AEVMPQVM---AXXXXXXXXXXXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMS 545
+P++M A T T+G+Y W +P+ + +++L G++
Sbjct: 500 KRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWL---MENPAYIPPAINLLVRGLN 556
Query: 546 TSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALS 605
+S + +C DC+ +L Y D L N ++N G +K S DS+ L+ ++
Sbjct: 557 SS--MSAQATLGLKELCRDCQLQLKPYADPLLNACHASLN-TGRMKNS--DSVRLMFSIG 611
Query: 606 MVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKHPRDLTVHIDRFAYIFRYVN 665
+++ L + K L+++ P LQ I Q R + ++ + +F +N
Sbjct: 612 KLMSLLRPEEIPKYLDIIVSPCFEELQAIC-QADSKTPAARIRTI-FRLNMISTLFSSLN 669
Query: 666 HP--EAVAD---------AIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAV 706
E D +QR PIFK I ++ ++ +E+ C A K+A+
Sbjct: 670 TDVDEQATDQPIVQPVLLVMQRTMPIFKRIAEMWVEEIDVLEAACSAMKHAI 721
Score = 131 (51.2 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 46/184 (25%), Positives = 87/184 (47%)
Query: 29 WLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRSKVQRDVEELPSEAVRGLQDSLN 88
WL D + + AWQ + L+ S E F + TL SK+ + E+P E L+ +
Sbjct: 30 WLTDAEASPQAWQFSWQLMQLGKSQ-EVQFFGAITLHSKLMKHWHEVPPENREELKQKIL 88
Query: 89 TLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGG--GIVNWLRDE-MNSHPEFVPGF- 144
+ +F GP V ++ I++ A VH+ E W G ++N +++ M + V +
Sbjct: 89 ESIVRFAGGPKIVLNRLCISLGAYIVHMLGE-WPGAIEEVINTFQNQRMPNVSADVQLWI 147
Query: 145 -LELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLTACLHINELKEQVLEAFA 203
LE+LT +PEE ++ +R E+ ++++ + T+ L + + EA++
Sbjct: 148 MLEVLTAIPEEA---QVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYS 204
Query: 204 SWLR 207
+ R
Sbjct: 205 NMNR 208
Score = 56 (24.8 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 35/167 (20%), Positives = 71/167 (42%)
Query: 264 LIQVIVPQIMSLKAHLTDSSKDEEDVKA-IARLFADMGDSYVELIATG---SD-ESMLIV 318
LI++ + + + D ED+ I LF + + L+ +G +D E ++V
Sbjct: 287 LIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSILV 346
Query: 319 HALLEVASH--------P-EYDIASMTFNFWHSLQVILTKRDSYISFGNEASAEAERSRR 369
H +++ H P E ++M FW+ LQ D + N+ ++ +
Sbjct: 347 HRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQ------DEVFAMSNDE----QKHKC 396
Query: 370 LQVFRSAYESLVSLVSFRVQYPQDYQDL---SLEDLKEFKHTRYDLA 413
+ + Y L ++ + + P D + L S +DL+ F+ R D++
Sbjct: 397 WEYIKPLYAHLTRILVRKSEQP-DEKSLAKWSSDDLECFRCYRQDIS 442
>WB|WBGene00006647 [details] [associations]
symbol:tsr-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR016024 GO:GO:0009792 SUPFAM:SSF48371
InterPro:IPR013598 Pfam:PF08389 GeneTree:ENSGT00530000063347
KO:K15436 EMBL:FO081454 PIR:T32381 RefSeq:NP_494279.3
ProteinModelPortal:O17244 SMR:O17244 DIP:DIP-27059N IntAct:O17244
MINT:MINT-1057078 PaxDb:O17244 EnsemblMetazoa:F53G2.6 GeneID:173601
KEGG:cel:CELE_F53G2.6 UCSC:F53G2.6 CTD:173601 WormBase:F53G2.6
eggNOG:NOG250198 HOGENOM:HOG000021842 InParanoid:O17244 OMA:ICEDCRR
NextBio:880333 Uniprot:O17244
Length = 949
Score = 139 (54.0 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 53/217 (24%), Positives = 92/217 (42%)
Query: 427 IAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSV 486
+ + L D ++ D +++++ K +E CC + W +E+ALF + A+ + +
Sbjct: 380 LKAVEALRDVVFIVNSDKCIQMMHQKLIE---CCHKPNASWEESESALFVMSAVVQNL-L 435
Query: 487 VEAEV-MPQVMAXXXXXXXXX--XXXXTVCLTIGAYSKWFDAASSDPSILASVLSILTSG 543
E++ MP+V+ T I + WF+ S+ +L V+ T
Sbjct: 436 PESDTNMPEVLQLICSLPVQSPPALIATSLSLISDLNDWFEQHSN---LLEPVVR-WTLQ 491
Query: 544 MSTSEDTXXXXXXXFRHICDDCRKKLCGYLDGLYNVY----RTAVNGEGSLKVSAEDSLH 599
+T F I C ++ L L + +T NG KV E
Sbjct: 492 FATDTRYASHVALCFDRITSKCAVQMTPLLPQLLTLIGVLEQTTTNGA---KVE-EAICS 547
Query: 600 LVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIIN 636
L A+SM+ ++LP +AK A+E LC P+V L + N
Sbjct: 548 LTRAISMIASKLPAHEAKIAMEQLCEPIVRNLLRVYN 584
Score = 111 (44.1 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 67/281 (23%), Positives = 125/281 (44%)
Query: 103 TQISIAVAALAVHISAEDWGGGGIVNWLRDEMNSHPEFVPG-----FLELLTVLPEEVFN 157
TQ+ +A+A L +I W NW+ + +N + + G L LL V PEEV
Sbjct: 70 TQLCLAIADL--YIQVPTWN-----NWIFELLNQC-QALEGDRTVMTLTLLQVFPEEVEQ 121
Query: 158 YKIAARPERRRQFEKELTSQMEVALSTLTACL---HIN-ELKEQVLEAFASWLRLKHRIP 213
+ RR EL + + ++ L+ L H N ++ ++V + S L+ H++
Sbjct: 122 IR-GVGENRRHAIRNELAACEQPMITFLSHVLEKFHSNADVLKRVFKCLESNLQ-NHQMR 179
Query: 214 GSVLASHPL------VLTALSSLHSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQV 267
A+ PL V+ ++ + L E + N I + + Y ++ L +V
Sbjct: 180 TDHFAASPLISMIFHVIASIDPIIPSCLHETATNCIVQAL-YRVEDLE----MHRKLAEV 234
Query: 268 IVPQIMSLKAHLTDSSKDEE-D-VKAIARLFADMGDS-YVELIATGSDE-----SMLIVH 319
+ ++SL + + + E+ D ++ IAR+F +M +S YV+++ + + S+
Sbjct: 235 VHRGVISLVSAFEKAQQVEDFDRLQNIARIFVEMVESFYVQIVNEANPDPAAIGSLACFE 294
Query: 320 ALLEVASHPEY---------DIASMTFNFWHSLQVILTKRD 351
LL VA H ++ + M+FN W+ + L K D
Sbjct: 295 LLLLVAKHHDWALKIAIFLLQLIEMSFNVWYRITEELFKYD 335
Score = 48 (22.0 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 22/100 (22%), Positives = 43/100 (43%)
Query: 654 IDRFAYIFRYVN-HPEAVADAIQRLW-PIFKAIFDIRAWDMRTMESLCRACKYAVRTSK- 710
IDR AY++ + P A W + + D R E R ++++R+ +
Sbjct: 645 IDRCAYVWTSGSKQPPAEIP-----WFTVIQQCIDALLKSTRKFEGTPRLIEHSIRSCRL 699
Query: 711 --RFMGITIGAILEEIQGL----YQQHQQPCFLYLSSEVI 744
R +G +E + + Y +H+ +LYL+S ++
Sbjct: 700 IFRALGAQSMPFVEPVVTMMIETYPKHRHSSYLYLASVIV 739
>DICTYBASE|DDB_G0293110 [details] [associations]
symbol:ipo13A "importin 13" species:44689
"Dictyostelium discoideum" [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] InterPro:IPR001494 InterPro:IPR016024 PROSITE:PS50166
SMART:SM00913 dictyBase:DDB_G0293110 GO:GO:0005737 GO:GO:0006886
GenomeReviews:CM000155_GR SUPFAM:SSF48371 GO:GO:0008565
GO:GO:0005643 EMBL:AAFI02000199 InterPro:IPR013598 Pfam:PF08389
RefSeq:XP_629334.1 ProteinModelPortal:Q54C85
EnsemblProtists:DDB0304413 GeneID:8629058 KEGG:ddi:DDB_G0293110
eggNOG:NOG237172 OMA:HIAENHI ProtClustDB:CLSZ2429328 Uniprot:Q54C85
Length = 1064
Score = 180 (68.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 75/346 (21%), Positives = 155/346 (44%)
Query: 7 VKEALNALY--HHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETL-IFCSQT 63
V+ L +LY + D + Q +WL FQ + +W +A LL SN++ + F + T
Sbjct: 23 VETVLKSLYFPQNNDYSALPQIQQWLIQFQKSFSSWSIAPLLL---MSNIKEIQYFGAST 79
Query: 64 LRSKVQRDVEELPSEAVRGLQDSLNTLLK-KFHKGPPKVRTQISIAVAALAVHISAEDWG 122
+ +K++ + L + + D+L LK + K V T++ +AV+ +A H + + W
Sbjct: 80 IENKIKNNWLSLSQDMKKEFLDNLLLFLKTQITKCSTVVITRLCLAVSVIACHSTTDLWA 139
Query: 123 GGGIVNWLR---DEMNS----HPEFVPGFLELLTVLPEEVFNYKIAARPERRR---QFEK 172
I++ L+ ++N+ +P V LELLT+ PEE+ N + +R + QF K
Sbjct: 140 NP-ILDVLQLSFQDINNLDCFNPNLVNLTLELLTIFPEELTNADYITQEKRNKVGLQFNK 198
Query: 173 ELTSQMEVALSTLTACLHINEL--KEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSL 230
+ E+ ++ + L + L+ F SW+ L P L L+L ++
Sbjct: 199 HNSKVFEILCKIMSLPQNQQTLIFMKSSLKCFKSWI-LFDCSPREYLIDSDLILKCFEAV 257
Query: 231 -HSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDEEDV 289
++ L E + V+ E+ + T L+ + I ++ ++ +
Sbjct: 258 SNNPKLVEDFLMVLDEMFTFMGGKIFRSYTSAFSLVLSRILMIFP-SFYILALQEENQIF 316
Query: 290 KAIARLFADMGDSYVELIATGSDESMLIVHALLEVASHPEYDIASM 335
I LF+ + +++++ + + S AL+++A +++ +
Sbjct: 317 NQIFLLFSHIAENHIKTLLKNPELSNNFFKALIQMALKGDFETCEL 362
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 665 NHPEAVADAIQRLWPIFKAIFDIRAWDMRTMESLCRACKYAVRTSKRFMGIT-IGAILEE 723
N+ + V + I + PI+ + + + +E++ K A+ + IT I I +
Sbjct: 724 NNIKPVFEIINNIIPIYGELLSLNTLESSIIEAISIFYKKAIMINNNHQNITNIPEINRQ 783
Query: 724 IQGLYQQHQQPCFLYLSSEVIKVVFPPEVLALIF 757
+ + +H+ P L LS+ I +V P+ L F
Sbjct: 784 LTLAFLKHK-PLSLVLSTLSISIVNLPKEQHLDF 816
>FB|FBgn0034205 [details] [associations]
symbol:CG10950 species:7227 "Drosophila melanogaster"
[GO:0008320 "protein transmembrane transporter activity"
evidence=ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] InterPro:IPR016024 EMBL:AE013599 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR013598
Pfam:PF08389 GeneTree:ENSGT00530000063347 RefSeq:NP_611200.2
ProteinModelPortal:A1ZAR6 STRING:A1ZAR6 PaxDb:A1ZAR6 PRIDE:A1ZAR6
EnsemblMetazoa:FBtr0086990 GeneID:36942 KEGG:dme:Dmel_CG10950
UCSC:CG10950-RA FlyBase:FBgn0034205 eggNOG:NOG283603
InParanoid:A1ZAR6 OrthoDB:EOG4WWQ0K PhylomeDB:A1ZAR6
GenomeRNAi:36942 NextBio:801148 Bgee:A1ZAR6 Uniprot:A1ZAR6
Length = 586
Score = 159 (61.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 66/328 (20%), Positives = 133/328 (40%)
Query: 26 ADRWLQDFQHTIDAWQVADNLL-HDATSNLETLIFCSQTLRSKVQRDVEELPSEAVRGLQ 84
A+ +L FQ + D W +A+ +L + ++ L F + +L K++ L + L+
Sbjct: 25 ANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSLAKKIKTSFYSLQKFQLMSLK 84
Query: 85 DSLNTLLK--KFHKGPPKVRTQISIAVAALAVHISAEDWGGGGIVNWLRDEMNSHPEFVP 142
+SL LK + + Q+++ ++AL + S D+ + +++R +++ +P++V
Sbjct: 85 NSLIDHLKYAAMMRDSNSLIVQLAVGISALGLMFSQWDYE---LQDFVR-KLSENPQYVM 140
Query: 143 GFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLTACLHINELKEQVLE-- 200
LE+L V+PEE + ++ L Q L L L +L + L
Sbjct: 141 ALLEVLKVIPEETRPSNLPVEAKKLNSVIDTLEQQSPYILDVLEGLLQRPDLPDDALPKC 200
Query: 201 --AFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNVISELIHYSAAGSSGGA 258
ASW + P VL ++ IL+ VN E A +
Sbjct: 201 LAVCASWTKFSMLSPDQVLQRKLFIMAEF------ILATPLVNGHLEAAELFVALLEQ-S 253
Query: 259 TVNMPLIQVIVPQIMSLKAHLTDSSKDEEDVKAIARLFADMGDSYVELIATGSD---ESM 315
+ L + ++ LK S + ++ +F ++ ++ L T + E +
Sbjct: 254 LIRKELNSCLANSVICLKPAFKRSMGERSLLQNYCNIFVNLFQTHFRLTQTNPERLNERL 313
Query: 316 LIVHALLEVASHPEYDIASMTFNFWHSL 343
+ + LL VA ++ + W S+
Sbjct: 314 VTIELLLLVAEESPLEVIEASLGMWSSI 341
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 429 VADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAEAALFCIR 478
+ +VL+D A ++ D K+ I E + W EA++F +R
Sbjct: 396 IGEVLLDMAHMIDDDTVEKLCSIVVDE--------QSPWMEVEASVFFLR 437
>DICTYBASE|DDB_G0283745 [details] [associations]
symbol:DDB_G0283745 "transportin 3-like protein"
species:44689 "Dictyostelium discoideum" [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001494
InterPro:IPR016024 SMART:SM00913 dictyBase:DDB_G0283745
GO:GO:0006886 SUPFAM:SSF48371 EMBL:AAFI02000056 GO:GO:0008565
GO:GO:0005643 InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
RefSeq:XP_638922.1 EnsemblProtists:DDB0233855 GeneID:8624161
KEGG:ddi:DDB_G0283745 InParanoid:Q54QV1 OMA:NILEVQQ Uniprot:Q54QV1
Length = 981
Score = 150 (57.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 96/439 (21%), Positives = 190/439 (43%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
+++ L L+ H D+ ++ +A++WL +FQ+ + + L+ + + F QTL
Sbjct: 61 IEKVLQTLFTHHDNNLQNEANKWLLEFQNHQNIVPICLELIK-SNQPFFSQFFGIQTLYI 119
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVR----TQISIAVAALAVHISAEDWG 122
K+ + E S+ R + N + +F ++ ++I ++A+ +H W
Sbjct: 120 KIHSEWESKWSDEFR--VNIKNIIYSRFLSEKDQINQVFTSKICSCLSAVRIHSLPRLWE 177
Query: 123 G--GGIVNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEV 180
++ L +S L++L +LP E F I + RR +++ E
Sbjct: 178 HCIDDMLKLLHSSESSE-SIKRSSLDILCLLPLE-FETVILSN-SRRTAIKEDFYGHSEQ 234
Query: 181 ALSTLTACLHIN---ELKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSE 237
++T++ L +N + +L+ W+R + VL L+ ++++
Sbjct: 235 VINTISNFLSLNISSQFNILLLKCVRHWIRFSN---SKVLIKANLLNNIFKIINNQETII 291
Query: 238 ASVNVISELIHY----SAAGSSGGATVN--MP-------LIQVIVPQIMSLKAHLTDSSK 284
+++I +LI++ S ++ N +P LI + +M LK +S +
Sbjct: 292 ECLSLIGDLINFHTYISLISTNARPAQNNQIPDQANFQHLIAPTIKVLMGLKPMYEESIQ 351
Query: 285 DEEDVKAIARLFADMGDSYVELIATGS-DESMLIVHA----LLEVASHPEYDIASMTFNF 339
+ D I R FAD+ VE A D ++L V LLE+ SHP +I+ +TF+
Sbjct: 352 N--DNLFICRAFADVLSQIVECYAPIMLDVNILEVQQCLTFLLELCSHPNKEISEITFDA 409
Query: 340 WHSLQVILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQ---- 395
W SL ++ S + +AS E F+ Y L+ L+ R YP + +
Sbjct: 410 W-SLH---SEHASLL----DASTAGEP------FQKLYAKLLQLLLERSSYPSNIEKVRP 455
Query: 396 --DLSLEDLKEFKHTRYDL 412
DL+ +D+ +++ D+
Sbjct: 456 NSDLA-DDVSNYRNNVCDI 473
>TAIR|locus:2097750 [details] [associations]
symbol:XPO1B "AT3G03110" species:3702 "Arabidopsis
thaliana" [GO:0000059 "protein import into nucleus, docking"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005643
"nuclear pore" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA;ISS]
[GO:0009553 "embryo sac development" evidence=IGI] [GO:0009555
"pollen development" evidence=IGI] [GO:0009846 "pollen germination"
evidence=IGI] [GO:0009860 "pollen tube growth" evidence=IGI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0010498
"proteasomal protein catabolic process" evidence=RCA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0009506 EMBL:CP002686 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009555
GO:GO:0008565 GO:GO:0005643 GO:GO:0009860 GO:GO:0009553
GO:GO:0009846 InterPro:IPR013598 Pfam:PF08389 KO:K14290
InterPro:IPR014877 Pfam:PF08767 SMART:SM01102 OMA:SAPENIS
IPI:IPI00536688 RefSeq:NP_566193.2 UniGene:At.10434
ProteinModelPortal:F4IZR5 SMR:F4IZR5 PRIDE:F4IZR5
EnsemblPlants:AT3G03110.1 GeneID:821074 KEGG:ath:AT3G03110
Uniprot:F4IZR5
Length = 1076
Score = 146 (56.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 67/351 (19%), Positives = 155/351 (44%)
Query: 11 LNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRSKVQR 70
+ A Y R AD L+D + D W ++L + TS+ T F Q L ++
Sbjct: 22 VEAFYSTGSKEERASADNILRDLKANPDTWLQVVHILQN-TSSTHTKFFALQVLEGVIKY 80
Query: 71 DVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQ-ISI-AVAALAVHISAEDWGGG--GI 126
LP E G+++ ++ ++ + + RT+ + + + + V I ++W
Sbjct: 81 RWNALPVEQRDGMKNYISDVIVQLSRDEASFRTERLYVNKLNIILVQIVKQEWPAKWKSF 140
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERR-RQFEKELTSQM----EVA 181
+ L + + +L +L EEVF++ +++ ++ ++ L S+ E+
Sbjct: 141 IPDLVIAAKTSETICENCMAILKLLSEEVFDFSKGEMTQQKIKELKQSLNSEFQLIHELC 200
Query: 182 LSTLTACLHINELKEQV--LEAFASWLRLKHRIPGSVLAS--HPLVLTALSSLHSEILSE 237
L L+A ++ + L A+ SW+ L + +L + A +L + LSE
Sbjct: 201 LYVLSASQRQELIRATLSALHAYLSWIPLGYIFESPLLEILLKFFPVPAYRNLTLQCLSE 260
Query: 238 -ASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSL-KAHLTDSSKDEEDVKAIARL 295
AS+N + ++ M +Q I+P +++ +A+ T SS+++ ++ +A
Sbjct: 261 VASLN-FGDFYDMQYVKMY---SIFMNQLQAILPLNLNIPEAYSTGSSEEQAFIQNLALF 316
Query: 296 FADMGDSYVELIATGSDESMLIVHAL---LEVASHPEYDIASMTFNFWHSL 343
F +++++ + + L++ L + ++ + ++ + ++W+SL
Sbjct: 317 FTSFFKLHIKILESAPENISLLLAGLGYLISISYVDDTEVFKVCLDYWNSL 367
>TAIR|locus:2148216 [details] [associations]
symbol:XPO1A "AT5G17020" species:3702 "Arabidopsis
thaliana" [GO:0000059 "protein import into nucleus, docking"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;TAS] [GO:0005643
"nuclear pore" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA;ISS]
[GO:0004872 "receptor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006611 "protein export from nucleus"
evidence=ISS] [GO:0009553 "embryo sac development" evidence=IGI]
[GO:0009555 "pollen development" evidence=IGI] [GO:0009846 "pollen
germination" evidence=IGI] [GO:0009860 "pollen tube growth"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0000741
"karyogamy" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009555 GO:GO:0008565 GO:GO:0005643
GO:GO:0004872 GO:GO:0009860 GO:GO:0009553 GO:GO:0006611
GO:GO:0009846 EMBL:AL391141 InterPro:IPR013598 Pfam:PF08389
KO:K14290 InterPro:IPR014877 Pfam:PF08767 SMART:SM01102
HOGENOM:HOG000209012 EMBL:AY056126 EMBL:AY096633 EMBL:Y18470
EMBL:Y18469 IPI:IPI00544899 PIR:T51557 PIR:T52638
RefSeq:NP_197204.1 UniGene:At.492 ProteinModelPortal:Q9SMV6
SMR:Q9SMV6 IntAct:Q9SMV6 STRING:Q9SMV6 PRIDE:Q9SMV6 ProMEX:Q9SMV6
EnsemblPlants:AT5G17020.1 GeneID:831565 KEGG:ath:AT5G17020
TAIR:At5g17020 InParanoid:Q9SMV6 OMA:CTLSMIN PhylomeDB:Q9SMV6
ProtClustDB:CLSN2686313 ArrayExpress:Q9SMV6 Genevestigator:Q9SMV6
Uniprot:Q9SMV6
Length = 1075
Score = 142 (55.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 65/355 (18%), Positives = 161/355 (45%)
Query: 23 RMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRSKVQRDVEELPSEAVRG 82
R AD+ L+D Q D W ++L + T++L+T F Q L ++ LP E G
Sbjct: 34 RAAADQILRDLQANPDMWLQVVHILQN-TNSLDTKFFALQVLEGVIKYRWNALPVEQRDG 92
Query: 83 LQDSLNTLLKKFHKGPPKVRTQ-ISI-AVAALAVHISAEDWGGG--GIVNWLRDEMNSHP 138
+++ ++ ++ + R++ + + + + V I DW + L +
Sbjct: 93 MKNYISEVIVQLSSNEASFRSERLYVNKLNVILVQIVKHDWPAKWTSFIPDLVAAAKTSE 152
Query: 139 EFVPGFLELLTVLPEEVFNYKIAARPERR-RQFEKELTSQM----EVALSTLTACLHINE 193
+ +L +L EEVF++ +++ ++ ++ L S+ E+ L L+A +
Sbjct: 153 TICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFKLIHELCLYVLSASQRQDL 212
Query: 194 LKEQV--LEAFASWLRLKHRIPGSVLAS--HPLVLTALSSLHSEILSEASVNVISELIHY 249
++ + L A+ SW+ L + ++L + + A +L + L+E + + +
Sbjct: 213 IRATLSALHAYLSWIPLGYIFESTLLETLLKFFPVPAYRNLTIQCLTEVAALNFGDFYNV 272
Query: 250 SAAGSSGGATVNMPLIQVIVPQIMSL-KAHLTDSSKDEEDVKAIARLFADMGDSYVELI- 307
T+ + +++I+P + +A+ + S +++ ++ +A F ++ ++
Sbjct: 273 QYVKMY---TIFIGQLRIILPPSTKIPEAYSSGSGEEQAFIQNLALFFTSFFKFHIRVLE 329
Query: 308 ATGSDESMLI--VHALLEVASHPEYDIASMTFNFWHSLQVILTKRDSYISFGNEA 360
+T S+L+ + L+ ++ + ++ + ++W+SL +L D++ + N A
Sbjct: 330 STPEVVSLLLAGLEYLINISYVDDTEVFKVCLDYWNSL--VLELFDAHHNSDNPA 382
Score = 46 (21.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 11/51 (21%), Positives = 23/51 (45%)
Query: 690 WDMRTM-----ESLCRACKYAVRT-SKRFMGITIGAILEEIQGLYQQHQQP 734
WD T+ +++ +Y ++ S F +T + + + GLY+ P
Sbjct: 965 WDATTVPYPYPDNVAFVREYTIKLLSSSFPNMTAAEVTQFVNGLYESRNDP 1015
>UNIPROTKB|F1SKB5 [details] [associations]
symbol:XPOT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006409 "tRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR001494 InterPro:IPR016024
SMART:SM00913 GO:GO:0005737 GO:GO:0006886 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005643 GO:GO:0000049 GO:GO:0006409 InterPro:IPR013598
Pfam:PF08389 KO:K14288 CTD:11260 GeneTree:ENSGT00390000007890
EMBL:CU855647 RefSeq:XP_003126398.3 Ensembl:ENSSSCT00000000504
GeneID:100511016 KEGG:ssc:100511016 Uniprot:F1SKB5
Length = 586
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 83/389 (21%), Positives = 165/389 (42%)
Query: 8 KEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDAT-SNLETLIFCSQTLRS 66
++AL L + D R +A + + + + DAWQV L T S+ FC Q L
Sbjct: 3 EQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHIKFFCFQVLEH 62
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
+V+ EL + + ++++L + L+ P +T I A + + ++ +
Sbjct: 63 QVKYKYSELTTIQQQLIRETLISWLQAQMLNPQAEKTFIRNKAAQVFALLFVTEY----L 118
Query: 127 VNW------LRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPE--RRRQFEKE----- 173
W + ++ +P V +L +L + E+ + + E RR K+
Sbjct: 119 TKWPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQ 178
Query: 174 -LTSQMEVALSTLTACLHIN-ELKEQVLE---AFASWLRLKHRIPGSVLASHPLVLTALS 228
+ + +E L + N E+ Q LE A+ SW+ L S++A+ + L
Sbjct: 179 CIPNLVESWYQILQNYQYTNSEVTCQCLEVVGAYVSWIDL------SLIANDRFINMLLG 232
Query: 229 SLHSEILSEASVNVISELIHYSAAGSSGGATVN-MPLIQVIVPQIMSLKAHLTDSSKDEE 287
+ E+L E + + + E+++ G V+ M L++ + + S D +D +
Sbjct: 233 HMSIEVLREEACDCLFEIVN------KGMDPVDKMKLVESLCQVLQSAGFFSIDQEEDVD 286
Query: 288 DVKAIARLFADMGDSYV----ELIATG----SDESMLIVHA----LLEVASHPEYDIASM 335
+ ++L MG S + +LI G + E++ + +L++ H + DI+S
Sbjct: 287 FLARFSKLVNGMGQSLIVSWTKLIKNGDIKNAQEALQAIETKVALMLQLLIHEDDDISSN 346
Query: 336 TFNFWHSLQVILTKRDSYISFGNEASAEA 364
F + IL K+ + +S +A+ EA
Sbjct: 347 IIGFCYDYLHIL-KQLTVLSDQQKANVEA 374
>UNIPROTKB|E1C593 [details] [associations]
symbol:XPOT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006409 "tRNA export from nucleus"
evidence=IEA] InterPro:IPR001494 InterPro:IPR016024 SMART:SM00913
GO:GO:0005737 GO:GO:0006886 GO:GO:0005654 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643
GO:GO:0000049 GO:GO:0006409 InterPro:IPR013598 Pfam:PF08389
KO:K14288 OMA:GHMSVEV CTD:11260 GeneTree:ENSGT00390000007890
EMBL:AADN02009917 EMBL:AADN02009918 IPI:IPI00573825
RefSeq:NP_001186535.1 UniGene:Gga.31060 Ensembl:ENSGALT00000015988
GeneID:417824 KEGG:gga:417824 NextBio:20821067 Uniprot:E1C593
Length = 962
Score = 126 (49.4 bits), Expect = 0.00044, P = 0.00044
Identities = 85/389 (21%), Positives = 165/389 (42%)
Query: 8 KEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQV-ADNLLHDATSNLETLIFCSQTLRS 66
++AL L + D R +A + + + + DAWQV A+ L S+ FC Q L
Sbjct: 3 EQALLGLNPNADADFRQRALAYFEQLKISQDAWQVCAEALAQSIYSDDHIKFFCFQVLEH 62
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
+V+ EL + ++++L T L+ P +T I A + + ++ +
Sbjct: 63 QVKFKYSELTEVQQQLIRETLITWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEY----L 118
Query: 127 VNW------LRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPE--RRRQFEKE----- 173
W + ++ +P V +L +L + E+ + + E RR K+
Sbjct: 119 TKWPKFFFDILSVVDLNPRGVDMYLRILMAVDAELVDRDVVHTSEEARRNTLLKDTMREQ 178
Query: 174 -LTSQMEVALSTLTACLHIN-ELKEQVLE---AFASWLRLKHRIPGSVLASHPLVLTALS 228
+ S +E L + N EL Q LE A+ SW+ L S++A+ + L
Sbjct: 179 CIPSLVESWYQILQNYQYNNSELTCQCLEVVGAYVSWIDL------SLIANERFINMLLG 232
Query: 229 SLHSEILSEASVNVISELIHYSAAGSSGGATVNMP-LIQVIVPQIMSLKAHLTDSSKDEE 287
+ E+L E + + + E+++ G ++ L++ + + S D D +
Sbjct: 233 HMSVEVLREEACDCLFEIVN------KGMDPIDKTKLVESLCQVLQSAGLFSIDQEDDVD 286
Query: 288 DVKAIARLFADMGD----SYVELIATG----SDESMLIVHA----LLEVASHPEYDIASM 335
+ ++L MG S+ +LI +G + +++ + A +L++ H + DI+S
Sbjct: 287 FLARFSKLVNGMGQALIASWTKLIKSGDMKSAQDALQAIEAKVSLMLQLLIHEDDDISSN 346
Query: 336 TFNFWHSLQVILTKRDSYISFGNEASAEA 364
F + IL K+ S +S +A+ EA
Sbjct: 347 IIGFCYDYLHIL-KQLSALSDQQKANVEA 374
>UNIPROTKB|J9P2A6 [details] [associations]
symbol:XPOT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 SMART:SM00913 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005643 InterPro:IPR013598 Pfam:PF08389 KO:K14288 CTD:11260
GeneTree:ENSGT00390000007890 EMBL:AAEX03006995 RefSeq:XP_531658.2
Ensembl:ENSCAFT00000048549 GeneID:474427 KEGG:cfa:474427
Uniprot:J9P2A6
Length = 962
Score = 123 (48.4 bits), Expect = 0.00093, P = 0.00093
Identities = 83/389 (21%), Positives = 164/389 (42%)
Query: 8 KEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDAT-SNLETLIFCSQTLRS 66
++AL L + D R +A + + + + DAWQV L T S+ FC Q L
Sbjct: 3 EQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHIKFFCFQVLEH 62
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
+V+ EL + + ++++L + L+ P +T I A + + ++ +
Sbjct: 63 QVKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEY----L 118
Query: 127 VNW------LRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPE--RRRQFEKE----- 173
W + ++ +P V +L +L + E+ + + E RR K+
Sbjct: 119 TRWPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQ 178
Query: 174 -LTSQMEVALSTLTACLHIN-ELKEQVLE---AFASWLRLKHRIPGSVLASHPLVLTALS 228
+ + +E L + N E+ Q LE A+ SW+ L S++A+ + L
Sbjct: 179 CIPNLVESWYQILQNYQYTNSEVTCQCLEVVGAYVSWIDL------SLIANDRFINMLLG 232
Query: 229 SLHSEILSEASVNVISELIHYSAAGSSGGATVN-MPLIQVIVPQIMSLKAHLTDSSKDEE 287
+ E+L E + + + E+++ G V+ M L++ + + S D +D +
Sbjct: 233 HMSIEVLREEACDCLFEIVN------KGMDPVDKMKLVESLCQVLQSAGFFSIDQEEDVD 286
Query: 288 DVKAIARLFADMGDSYV----ELIATG----SDESMLIVHA----LLEVASHPEYDIASM 335
+ ++L MG S + +LI G + E++ + +L++ H + DI+S
Sbjct: 287 FLARFSKLVNGMGQSLIVSWTKLIKNGDIKNAQEALQAIETKVALMLQLLIHEDDDISSN 346
Query: 336 TFNFWHSLQVILTKRDSYISFGNEASAEA 364
F + IL K+ +S +A+ EA
Sbjct: 347 IIGFCYDYLHIL-KQLPVLSDQQKANVEA 374
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 757 737 0.00088 121 3 11 22 0.36 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 631 (67 KB)
Total size of DFA: 375 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.32u 0.10s 62.42t Elapsed: 00:00:12
Total cpu time: 62.34u 0.10s 62.44t Elapsed: 00:00:13
Start: Tue May 21 11:01:13 2013 End: Tue May 21 11:01:26 2013