Query 004400
Match_columns 756
No_of_seqs 638 out of 4855
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 22:47:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004400.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004400hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.7E-72 3.7E-77 687.4 45.4 660 12-688 255-953 (968)
2 KOG1187 Serine/threonine prote 100.0 1.1E-54 2.3E-59 462.2 27.6 280 407-686 66-352 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.4E-47 3.1E-52 404.2 25.2 256 419-689 44-306 (362)
4 KOG0581 Mitogen-activated prot 100.0 2.1E-47 4.5E-52 382.1 20.7 247 417-682 80-335 (364)
5 KOG0595 Serine/threonine-prote 100.0 8.6E-47 1.9E-51 380.4 22.7 207 415-627 9-224 (429)
6 KOG0197 Tyrosine kinases [Sign 100.0 4.1E-46 8.8E-51 390.4 20.9 252 418-686 208-461 (468)
7 KOG0575 Polo-like serine/threo 100.0 9.1E-46 2E-50 391.0 22.7 247 416-681 18-268 (592)
8 KOG0598 Ribosomal protein S6 k 100.0 7.1E-46 1.5E-50 371.1 19.3 244 414-675 23-270 (357)
9 KOG0615 Serine/threonine prote 100.0 4.8E-46 1E-50 374.0 15.7 255 413-683 169-438 (475)
10 KOG0591 NIMA (never in mitosis 100.0 1.9E-46 4.1E-51 358.6 11.4 253 416-683 19-282 (375)
11 KOG0592 3-phosphoinositide-dep 100.0 1.1E-43 2.4E-48 368.7 20.5 252 413-682 70-338 (604)
12 KOG0593 Predicted protein kina 100.0 5.7E-44 1.2E-48 345.1 16.4 261 416-681 2-283 (396)
13 KOG0600 Cdc2-related protein k 100.0 9E-43 1.9E-47 359.0 22.7 264 415-682 116-400 (560)
14 KOG0198 MEKK and related serin 100.0 6E-43 1.3E-47 357.5 18.6 255 416-684 17-278 (313)
15 KOG0578 p21-activated serine/t 100.0 4.2E-43 9.1E-48 368.0 17.6 251 415-682 272-523 (550)
16 KOG1026 Nerve growth factor re 100.0 3.2E-43 6.9E-48 386.0 16.9 258 415-688 485-764 (774)
17 KOG0659 Cdk activating kinase 100.0 2.8E-42 6.2E-47 328.2 19.6 262 416-682 2-281 (318)
18 KOG0616 cAMP-dependent protein 100.0 7.3E-42 1.6E-46 330.1 19.1 238 414-673 42-283 (355)
19 KOG0661 MAPK related serine/th 100.0 1.1E-42 2.5E-47 355.6 13.7 261 415-682 9-291 (538)
20 KOG0582 Ste20-like serine/thre 100.0 2.3E-41 4.9E-46 343.6 22.1 260 415-681 25-292 (516)
21 KOG0583 Serine/threonine prote 100.0 5.2E-41 1.1E-45 358.1 24.9 249 414-680 15-273 (370)
22 KOG0605 NDR and related serine 100.0 2.5E-41 5.5E-46 351.7 20.9 252 410-680 135-443 (550)
23 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.9E-41 8.4E-46 362.4 21.0 258 414-686 5-334 (338)
24 KOG0194 Protein tyrosine kinas 100.0 1.1E-41 2.3E-46 363.4 16.2 261 414-690 155-424 (474)
25 KOG0597 Serine-threonine prote 100.0 1.9E-41 4.2E-46 351.5 16.9 246 416-681 2-250 (808)
26 KOG0193 Serine/threonine prote 100.0 6.9E-42 1.5E-46 359.4 13.6 259 415-688 391-655 (678)
27 KOG0585 Ca2+/calmodulin-depend 100.0 5.8E-41 1.2E-45 342.5 18.8 254 414-684 95-374 (576)
28 PHA02988 hypothetical protein; 100.0 2.6E-40 5.7E-45 346.2 24.0 246 421-686 25-279 (283)
29 KOG1095 Protein tyrosine kinas 100.0 7.5E-41 1.6E-45 380.6 19.9 259 415-689 691-964 (1025)
30 cd05096 PTKc_DDR1 Catalytic do 100.0 7.6E-40 1.6E-44 346.9 26.1 260 416-684 5-303 (304)
31 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.4E-40 7.4E-45 342.5 23.0 256 415-686 4-265 (266)
32 KOG0201 Serine/threonine prote 100.0 1.5E-41 3.3E-46 345.0 10.5 248 416-681 13-262 (467)
33 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8.2E-40 1.8E-44 337.6 23.4 252 416-684 4-256 (256)
34 KOG4721 Serine/threonine prote 100.0 4.6E-41 9.9E-46 348.3 13.5 241 419-685 127-367 (904)
35 KOG0694 Serine/threonine prote 100.0 2.5E-40 5.4E-45 353.6 18.5 245 412-676 364-613 (694)
36 cd05631 STKc_GRK4 Catalytic do 100.0 1.5E-39 3.3E-44 341.1 23.2 249 418-681 2-260 (285)
37 KOG4257 Focal adhesion tyrosin 100.0 3.1E-40 6.7E-45 345.4 17.3 257 415-688 388-651 (974)
38 KOG0588 Serine/threonine prote 100.0 6.7E-40 1.4E-44 347.2 19.4 247 416-682 12-263 (786)
39 KOG0580 Serine/threonine prote 100.0 3.8E-40 8.1E-45 309.4 15.4 250 413-682 19-273 (281)
40 cd05072 PTKc_Lyn Catalytic dom 100.0 3.2E-39 6.9E-44 334.2 23.9 254 415-685 5-260 (261)
41 KOG0663 Protein kinase PITSLRE 100.0 1.1E-39 2.4E-44 319.5 18.9 263 415-682 75-361 (419)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 4.5E-39 9.7E-44 345.0 25.4 262 415-682 4-301 (331)
43 cd05104 PTKc_Kit Catalytic dom 100.0 1.7E-39 3.6E-44 353.7 22.1 255 415-685 34-373 (375)
44 cd05106 PTKc_CSF-1R Catalytic 100.0 1.4E-39 3.1E-44 353.9 20.9 258 414-686 36-372 (374)
45 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.1E-39 4.5E-44 348.0 21.4 253 416-682 1-257 (333)
46 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.3E-39 1.4E-43 331.0 24.1 252 416-684 4-256 (256)
47 cd05571 STKc_PKB Catalytic dom 100.0 2.2E-39 4.7E-44 346.1 21.1 242 422-682 1-251 (323)
48 cd05068 PTKc_Frk_like Catalyti 100.0 4.6E-39 1E-43 333.1 22.8 255 414-685 4-260 (261)
49 cd07848 STKc_CDKL5 Catalytic d 100.0 3.5E-39 7.6E-44 338.9 22.2 262 416-681 1-283 (287)
50 KOG0611 Predicted serine/threo 100.0 8.7E-40 1.9E-44 326.4 16.5 248 415-683 52-304 (668)
51 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.5E-39 1.4E-43 336.9 24.1 261 416-681 5-284 (288)
52 cd05612 STKc_PRKX_like Catalyt 100.0 2E-39 4.4E-44 341.2 19.8 245 416-682 1-254 (291)
53 cd05048 PTKc_Ror Catalytic Dom 100.0 6.7E-39 1.4E-43 336.0 23.6 255 416-686 5-283 (283)
54 KOG0196 Tyrosine kinase, EPH ( 100.0 9.4E-41 2E-45 358.5 9.6 257 417-689 630-894 (996)
55 PTZ00263 protein kinase A cata 100.0 2.8E-39 6.1E-44 346.1 20.6 245 416-682 18-271 (329)
56 cd05052 PTKc_Abl Catalytic dom 100.0 7.8E-39 1.7E-43 331.8 23.1 254 416-686 6-262 (263)
57 KOG0589 Serine/threonine prote 100.0 2.1E-39 4.7E-44 339.1 17.9 250 416-682 4-258 (426)
58 cd05033 PTKc_EphR Catalytic do 100.0 1.7E-38 3.6E-43 329.9 24.4 255 416-686 4-265 (266)
59 cd05059 PTKc_Tec_like Catalyti 100.0 1.3E-38 2.7E-43 328.8 23.3 250 417-683 5-255 (256)
60 KOG0033 Ca2+/calmodulin-depend 100.0 2.3E-40 5E-45 310.6 8.9 252 415-682 10-267 (355)
61 cd05585 STKc_YPK1_like Catalyt 100.0 6.7E-39 1.5E-43 340.7 21.3 241 424-683 1-245 (312)
62 PF07714 Pkinase_Tyr: Protein 100.0 3.6E-39 7.8E-44 333.3 18.5 248 420-683 3-259 (259)
63 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-38 2.5E-43 330.1 22.3 255 414-685 4-260 (261)
64 cd05601 STKc_CRIK Catalytic do 100.0 4.9E-39 1.1E-43 344.8 20.0 253 416-682 1-263 (330)
65 cd06650 PKc_MEK1 Catalytic dom 100.0 3.3E-38 7.2E-43 338.3 25.4 261 415-682 4-299 (333)
66 cd05090 PTKc_Ror1 Catalytic do 100.0 2.3E-38 5E-43 332.0 23.6 255 416-686 5-283 (283)
67 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.8E-38 6.2E-43 327.0 23.9 253 416-686 6-260 (260)
68 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-38 2.3E-43 342.5 21.4 252 417-682 1-267 (332)
69 PTZ00267 NIMA-related protein 100.0 1.7E-38 3.7E-43 356.1 23.8 249 417-681 68-322 (478)
70 cd05593 STKc_PKB_gamma Catalyt 100.0 2E-38 4.3E-43 339.2 23.1 242 422-682 1-251 (328)
71 cd05108 PTKc_EGFR Catalytic do 100.0 1.3E-38 2.9E-43 339.2 21.7 255 416-687 7-269 (316)
72 cd05049 PTKc_Trk Catalytic dom 100.0 3E-38 6.5E-43 330.5 23.8 254 415-684 4-279 (280)
73 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4E-38 8.7E-43 333.5 25.0 262 415-681 4-287 (303)
74 cd05595 STKc_PKB_beta Catalyti 100.0 2E-38 4.4E-43 338.6 22.7 242 422-682 1-251 (323)
75 cd05085 PTKc_Fer Catalytic dom 100.0 4.1E-38 9E-43 323.6 24.2 247 422-684 1-249 (250)
76 KOG0577 Serine/threonine prote 100.0 2.1E-39 4.5E-44 337.3 14.5 244 417-681 27-277 (948)
77 PTZ00426 cAMP-dependent protei 100.0 1.2E-38 2.7E-43 341.9 21.1 246 415-682 29-284 (340)
78 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.1E-38 4.5E-43 346.1 23.1 257 415-686 36-397 (400)
79 KOG0658 Glycogen synthase kina 100.0 3.4E-39 7.4E-44 322.3 15.3 256 417-682 25-306 (364)
80 cd05093 PTKc_TrkB Catalytic do 100.0 4.5E-38 9.8E-43 330.6 24.7 258 415-688 4-281 (288)
81 KOG0594 Protein kinase PCTAIRE 100.0 1.8E-38 3.9E-43 318.2 20.2 262 416-682 11-302 (323)
82 cd07862 STKc_CDK6 Catalytic do 100.0 2.1E-38 4.6E-43 333.5 21.8 260 416-681 1-286 (290)
83 cd05628 STKc_NDR1 Catalytic do 100.0 2.2E-38 4.8E-43 344.0 22.5 253 416-682 1-293 (363)
84 cd05626 STKc_LATS2 Catalytic d 100.0 2.3E-38 5.1E-43 346.0 22.7 252 417-682 2-305 (381)
85 cd05094 PTKc_TrkC Catalytic do 100.0 3.1E-38 6.8E-43 332.4 22.8 257 416-688 5-284 (291)
86 cd05084 PTKc_Fes Catalytic dom 100.0 4.2E-38 9.1E-43 324.1 23.2 247 422-684 1-251 (252)
87 cd05071 PTKc_Src Catalytic dom 100.0 5.4E-38 1.2E-42 325.2 24.1 254 415-686 5-260 (262)
88 KOG1094 Discoidin domain recep 100.0 8.9E-39 1.9E-43 332.8 18.1 261 416-685 538-803 (807)
89 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.7E-39 2.1E-43 345.6 19.1 252 416-682 1-285 (350)
90 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.8E-38 6.1E-43 340.2 22.6 261 417-682 1-290 (338)
91 cd05111 PTK_HER3 Pseudokinase 100.0 4.7E-38 1E-42 328.8 23.5 255 416-687 7-269 (279)
92 cd05596 STKc_ROCK Catalytic do 100.0 1.4E-38 3E-43 345.9 20.2 255 413-682 40-304 (370)
93 cd05584 STKc_p70S6K Catalytic 100.0 2.1E-38 4.5E-43 338.6 21.1 242 422-682 2-256 (323)
94 PHA03212 serine/threonine kina 100.0 4.6E-38 9.9E-43 343.2 23.8 256 415-681 91-375 (391)
95 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-38 5.2E-43 343.5 21.5 257 411-682 38-304 (370)
96 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.9E-38 1.5E-42 324.1 23.8 253 415-685 5-259 (260)
97 KOG0660 Mitogen-activated prot 100.0 2.2E-38 4.8E-43 316.0 19.2 272 415-691 21-321 (359)
98 KOG1989 ARK protein kinase fam 100.0 3.3E-38 7.2E-43 348.5 22.5 260 414-690 35-315 (738)
99 cd05599 STKc_NDR_like Catalyti 100.0 1.6E-38 3.5E-43 345.6 19.9 252 416-682 1-296 (364)
100 cd05062 PTKc_IGF-1R Catalytic 100.0 4.5E-38 9.7E-43 328.7 22.3 255 414-684 4-276 (277)
101 cd05054 PTKc_VEGFR Catalytic d 100.0 3.2E-38 6.9E-43 338.7 21.4 257 415-686 6-333 (337)
102 PLN00034 mitogen-activated pro 100.0 2.8E-38 6.1E-43 341.9 20.8 248 416-682 74-328 (353)
103 cd05592 STKc_nPKC_theta_delta 100.0 6.3E-38 1.4E-42 333.7 23.2 238 422-678 1-243 (316)
104 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.1E-38 1.1E-42 329.3 22.1 264 418-686 6-281 (283)
105 cd05091 PTKc_Ror2 Catalytic do 100.0 5.3E-38 1.2E-42 329.2 21.7 254 417-686 6-283 (283)
106 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-37 2.9E-42 323.5 24.4 256 415-686 4-267 (268)
107 cd05115 PTKc_Zap-70 Catalytic 100.0 1.4E-37 3.1E-42 321.0 24.5 247 423-686 2-255 (257)
108 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-37 3.4E-42 321.4 24.7 252 416-685 6-259 (260)
109 cd05594 STKc_PKB_alpha Catalyt 100.0 5E-38 1.1E-42 336.0 21.5 242 422-682 1-252 (325)
110 cd05605 STKc_GRK4_like Catalyt 100.0 8.3E-38 1.8E-42 328.0 22.7 251 417-682 1-261 (285)
111 cd05053 PTKc_FGFR Catalytic do 100.0 5.4E-38 1.2E-42 330.9 21.4 260 412-687 8-292 (293)
112 cd05598 STKc_LATS Catalytic do 100.0 3.4E-38 7.3E-43 344.5 20.5 251 417-682 2-301 (376)
113 cd05629 STKc_NDR_like_fungal C 100.0 3.8E-38 8.2E-43 344.1 20.8 252 416-682 1-305 (377)
114 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-37 2.3E-42 325.8 23.3 255 414-684 4-276 (277)
115 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-37 2.3E-42 327.2 23.0 264 416-686 4-283 (284)
116 PTZ00283 serine/threonine prot 100.0 4.8E-38 1E-42 352.6 21.6 255 412-682 28-297 (496)
117 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-37 3.1E-42 321.8 23.6 254 415-685 5-260 (261)
118 cd05591 STKc_nPKC_epsilon Cata 100.0 7.7E-38 1.7E-42 334.0 22.1 242 422-682 1-254 (321)
119 cd05092 PTKc_TrkA Catalytic do 100.0 1.6E-37 3.4E-42 325.1 24.1 254 416-685 5-280 (280)
120 cd05045 PTKc_RET Catalytic dom 100.0 1.2E-37 2.5E-42 327.9 23.2 255 417-687 1-287 (290)
121 cd08228 STKc_Nek6 Catalytic do 100.0 1.9E-37 4.1E-42 322.1 24.4 257 416-686 2-265 (267)
122 cd05590 STKc_nPKC_eta Catalyti 100.0 7.2E-38 1.6E-42 333.8 21.8 237 422-677 1-242 (320)
123 cd05051 PTKc_DDR Catalytic dom 100.0 2.3E-37 5E-42 326.6 25.4 261 415-684 4-295 (296)
124 cd05608 STKc_GRK1 Catalytic do 100.0 1.5E-37 3.2E-42 325.3 23.5 244 424-681 1-256 (280)
125 cd05066 PTKc_EphR_A Catalytic 100.0 1.6E-37 3.5E-42 322.7 23.7 255 416-686 4-266 (267)
126 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-37 4.2E-42 320.1 24.0 245 423-685 2-254 (257)
127 cd08529 STKc_FA2-like Catalyti 100.0 2E-37 4.4E-42 319.6 24.1 249 417-682 1-253 (256)
128 cd05097 PTKc_DDR_like Catalyti 100.0 2E-37 4.3E-42 326.9 24.5 261 415-684 4-294 (295)
129 cd05619 STKc_nPKC_theta Cataly 100.0 2.1E-37 4.5E-42 329.5 24.8 240 422-680 1-246 (316)
130 cd05587 STKc_cPKC Catalytic do 100.0 1.1E-37 2.4E-42 333.2 22.7 241 417-676 1-246 (324)
131 cd05112 PTKc_Itk Catalytic dom 100.0 3.2E-37 7E-42 318.2 25.3 251 416-683 4-255 (256)
132 KOG4278 Protein tyrosine kinas 100.0 1.7E-38 3.7E-43 331.6 15.6 254 416-686 267-523 (1157)
133 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-37 2.3E-42 334.2 22.2 255 416-682 1-266 (331)
134 cd05625 STKc_LATS1 Catalytic d 100.0 7.1E-38 1.5E-42 342.6 21.2 250 417-681 2-304 (382)
135 KOG4279 Serine/threonine prote 100.0 1.7E-38 3.6E-43 335.6 15.5 246 422-682 581-832 (1226)
136 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-37 3.1E-42 338.9 23.4 261 417-682 1-288 (372)
137 cd06646 STKc_MAP4K5 Catalytic 100.0 2E-37 4.3E-42 321.9 23.3 255 415-683 8-266 (267)
138 cd05622 STKc_ROCK1 Catalytic d 100.0 7.8E-38 1.7E-42 339.9 21.1 259 410-683 37-305 (371)
139 cd05089 PTKc_Tie1 Catalytic do 100.0 1E-37 2.3E-42 329.3 21.5 256 416-689 2-278 (297)
140 cd05589 STKc_PKN Catalytic dom 100.0 1.2E-37 2.6E-42 333.0 22.0 244 418-681 1-256 (324)
141 cd05616 STKc_cPKC_beta Catalyt 100.0 1.3E-37 2.9E-42 332.5 22.2 241 417-676 1-246 (323)
142 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-37 3E-42 333.3 22.1 255 416-682 1-266 (331)
143 cd05620 STKc_nPKC_delta Cataly 100.0 2.9E-37 6.3E-42 328.6 24.3 240 422-680 1-246 (316)
144 cd05618 STKc_aPKC_iota Catalyt 100.0 1.4E-37 3.1E-42 332.8 21.9 240 422-676 1-250 (329)
145 KOG0032 Ca2+/calmodulin-depend 100.0 2.4E-37 5.3E-42 329.4 23.5 251 415-682 34-293 (382)
146 cd05065 PTKc_EphR_B Catalytic 100.0 2.1E-37 4.5E-42 322.2 22.6 254 417-686 5-268 (269)
147 cd05095 PTKc_DDR2 Catalytic do 100.0 7.7E-37 1.7E-41 322.6 27.2 261 415-684 4-295 (296)
148 cd06625 STKc_MEKK3_like Cataly 100.0 3E-37 6.4E-42 319.8 23.6 251 416-682 2-260 (263)
149 cd05607 STKc_GRK7 Catalytic do 100.0 3.3E-37 7E-42 322.1 24.0 244 424-682 1-250 (277)
150 cd05570 STKc_PKC Catalytic dom 100.0 1.9E-37 4.1E-42 330.4 22.7 242 422-682 1-252 (318)
151 cd05055 PTKc_PDGFR Catalytic d 100.0 2.4E-37 5.2E-42 327.2 23.2 257 415-686 34-301 (302)
152 cd05575 STKc_SGK Catalytic dom 100.0 1.9E-37 4.1E-42 331.3 22.6 237 422-677 1-242 (323)
153 KOG2345 Serine/threonine prote 100.0 2.5E-38 5.4E-43 298.3 13.8 260 414-685 19-299 (302)
154 cd05032 PTKc_InsR_like Catalyt 100.0 3.7E-37 7.9E-42 321.8 24.1 254 415-684 5-276 (277)
155 cd05075 PTKc_Axl Catalytic dom 100.0 3.9E-37 8.4E-42 320.6 24.2 251 419-685 2-270 (272)
156 cd05109 PTKc_HER2 Catalytic do 100.0 3.3E-37 7.2E-42 322.5 23.6 257 415-688 6-270 (279)
157 cd05035 PTKc_Axl_like Catalyti 100.0 4.2E-37 9.2E-42 320.4 24.2 253 418-686 1-272 (273)
158 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.1E-36 2.3E-41 316.9 27.1 251 422-684 1-268 (269)
159 cd08229 STKc_Nek7 Catalytic do 100.0 3.3E-37 7.2E-42 320.2 23.2 257 416-686 2-265 (267)
160 cd05043 PTK_Ryk Pseudokinase d 100.0 2.2E-37 4.9E-42 324.0 22.1 257 414-686 4-276 (280)
161 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.7E-37 8E-42 327.1 24.0 261 416-681 6-285 (309)
162 cd05582 STKc_RSK_N N-terminal 100.0 5.2E-38 1.1E-42 335.0 17.5 238 422-678 2-245 (318)
163 cd06654 STKc_PAK1 Catalytic do 100.0 3.9E-37 8.5E-42 324.7 24.0 251 415-682 19-270 (296)
164 KOG0610 Putative serine/threon 100.0 1.1E-37 2.3E-42 314.6 18.6 252 415-681 76-391 (459)
165 cd05088 PTKc_Tie2 Catalytic do 100.0 1.7E-37 3.6E-42 328.7 21.2 254 415-686 6-280 (303)
166 KOG0574 STE20-like serine/thre 100.0 4.2E-39 9E-44 310.1 8.0 247 416-681 33-282 (502)
167 cd05073 PTKc_Hck Catalytic dom 100.0 4E-37 8.7E-42 318.3 23.4 253 415-685 5-259 (260)
168 cd05623 STKc_MRCK_alpha Cataly 100.0 1.9E-37 4.1E-42 332.5 21.6 255 416-682 1-266 (332)
169 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-37 4E-42 331.2 21.4 237 422-677 1-242 (321)
170 cd05107 PTKc_PDGFR_beta Cataly 100.0 2E-37 4.4E-42 338.1 22.2 257 415-686 36-399 (401)
171 cd05082 PTKc_Csk Catalytic dom 100.0 4.9E-37 1.1E-41 316.9 23.6 247 416-685 6-255 (256)
172 cd06624 STKc_ASK Catalytic dom 100.0 4.7E-37 1E-41 319.3 23.7 257 411-682 3-265 (268)
173 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.9E-37 1.3E-41 318.2 24.4 257 416-686 2-265 (267)
174 cd05039 PTKc_Csk_like Catalyti 100.0 4.5E-37 9.7E-42 317.2 23.3 249 415-685 5-255 (256)
175 cd05588 STKc_aPKC Catalytic do 100.0 3.1E-37 6.7E-42 330.3 22.8 245 422-681 1-261 (329)
176 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.5E-37 5.4E-42 327.7 21.8 259 414-688 13-298 (304)
177 cd06612 STKc_MST1_2 Catalytic 100.0 5.9E-37 1.3E-41 316.1 24.0 250 415-681 2-252 (256)
178 cd05041 PTKc_Fes_like Catalyti 100.0 7.4E-37 1.6E-41 314.5 24.6 247 422-684 1-250 (251)
179 PTZ00036 glycogen synthase kin 100.0 1.9E-37 4.2E-42 343.7 21.7 259 414-682 64-351 (440)
180 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.9E-37 8.4E-42 320.9 22.7 239 423-684 2-274 (274)
181 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.9E-37 6.2E-42 327.6 22.0 258 415-688 17-301 (307)
182 cd05050 PTKc_Musk Catalytic do 100.0 3.7E-37 8.1E-42 323.7 22.5 255 414-684 3-287 (288)
183 cd05056 PTKc_FAK Catalytic dom 100.0 3.5E-37 7.7E-42 320.6 22.1 255 416-687 6-266 (270)
184 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.4E-37 1.6E-41 316.6 24.3 240 422-684 1-262 (262)
185 cd05060 PTKc_Syk_like Catalyti 100.0 9.2E-37 2E-41 315.1 25.0 247 422-686 1-255 (257)
186 cd06643 STKc_SLK Catalytic dom 100.0 6.3E-37 1.4E-41 320.9 24.1 250 418-682 7-262 (282)
187 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.6E-37 1.7E-41 320.6 24.6 259 416-686 4-283 (284)
188 PRK13184 pknD serine/threonine 100.0 3.6E-37 7.8E-42 353.6 24.0 259 416-688 2-292 (932)
189 cd05047 PTKc_Tie Catalytic dom 100.0 6.7E-37 1.4E-41 318.6 23.5 247 422-686 1-268 (270)
190 KOG0599 Phosphorylase kinase g 100.0 4.4E-38 9.5E-43 299.6 13.2 253 414-682 15-283 (411)
191 cd06615 PKc_MEK Catalytic doma 100.0 7.1E-37 1.5E-41 324.7 24.0 261 416-682 1-287 (308)
192 cd05040 PTKc_Ack_like Catalyti 100.0 8.6E-37 1.9E-41 315.2 23.8 247 422-684 1-256 (257)
193 cd05615 STKc_cPKC_alpha Cataly 100.0 4.6E-37 1E-41 328.1 22.4 241 417-676 1-246 (323)
194 cd08219 STKc_Nek3 Catalytic do 100.0 7.3E-37 1.6E-41 315.4 23.2 249 417-682 1-252 (255)
195 cd05061 PTKc_InsR Catalytic do 100.0 5.5E-37 1.2E-41 322.4 22.4 257 414-686 4-278 (288)
196 cd05602 STKc_SGK1 Catalytic do 100.0 2.9E-37 6.3E-42 330.2 20.5 242 422-682 1-247 (325)
197 cd00192 PTKc Catalytic domain 100.0 1.4E-36 3.1E-41 314.0 24.9 247 422-684 1-262 (262)
198 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.8E-37 1.7E-41 325.3 23.4 258 415-688 11-295 (314)
199 cd06637 STKc_TNIK Catalytic do 100.0 7.3E-37 1.6E-41 318.6 22.6 252 413-681 3-268 (272)
200 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-36 2.7E-41 319.1 24.2 245 418-677 2-251 (285)
201 cd06611 STKc_SLK_like Catalyti 100.0 9.1E-37 2E-41 319.4 23.0 253 415-682 4-262 (280)
202 cd05604 STKc_SGK3 Catalytic do 100.0 2.3E-37 5.1E-42 330.9 18.8 241 422-681 1-246 (325)
203 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-36 2.3E-41 315.5 23.1 249 422-686 1-259 (262)
204 cd06656 STKc_PAK3 Catalytic do 100.0 1.2E-36 2.6E-41 321.2 23.7 251 415-682 18-269 (297)
205 cd05627 STKc_NDR2 Catalytic do 100.0 3.1E-37 6.7E-42 334.8 19.6 251 416-681 1-292 (360)
206 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-36 3.2E-41 319.8 24.1 252 416-682 12-269 (292)
207 cd06613 STKc_MAP4K3_like Catal 100.0 1.7E-36 3.7E-41 313.8 24.1 253 416-681 3-259 (262)
208 cd06645 STKc_MAP4K3 Catalytic 100.0 1.1E-36 2.3E-41 316.4 22.4 254 415-682 8-265 (267)
209 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-36 2.4E-41 318.6 22.4 246 417-682 2-253 (279)
210 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.9E-37 1.7E-41 326.9 21.8 241 422-677 1-249 (327)
211 PHA03211 serine/threonine kina 100.0 1.6E-36 3.4E-41 334.9 24.5 259 414-682 167-455 (461)
212 cd05630 STKc_GRK6 Catalytic do 100.0 1.5E-36 3.3E-41 318.3 23.2 249 418-681 2-260 (285)
213 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.7E-37 1.9E-41 328.8 21.8 258 415-687 6-340 (343)
214 cd07863 STKc_CDK4 Catalytic do 100.0 1.7E-36 3.6E-41 318.7 23.4 259 417-681 1-284 (288)
215 cd05042 PTKc_Aatyk Catalytic d 100.0 4.3E-36 9.4E-41 312.3 26.2 251 422-684 1-268 (269)
216 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.3E-36 4.9E-41 312.3 23.7 238 422-684 1-259 (259)
217 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.9E-36 8.5E-41 312.2 25.5 248 417-681 1-263 (267)
218 PF00069 Pkinase: Protein kina 100.0 6.9E-37 1.5E-41 316.3 19.7 253 418-682 1-257 (260)
219 cd07876 STKc_JNK2 Catalytic do 100.0 1.4E-36 3E-41 329.6 23.0 259 415-682 20-315 (359)
220 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.7E-37 1.2E-41 316.8 19.0 240 422-684 1-258 (258)
221 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.1E-36 2.4E-41 327.1 21.8 258 415-688 11-295 (334)
222 cd08221 STKc_Nek9 Catalytic do 100.0 3E-36 6.4E-41 311.0 24.2 250 417-683 1-254 (256)
223 KOG0199 ACK and related non-re 100.0 1.7E-37 3.7E-42 328.9 15.1 246 419-681 113-367 (1039)
224 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.1E-36 4.5E-41 317.2 23.2 258 416-686 4-283 (284)
225 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.2E-36 4.7E-41 320.0 23.5 262 416-682 6-286 (301)
226 cd05046 PTK_CCK4 Pseudokinase 100.0 1.8E-36 4E-41 316.1 22.6 254 416-684 5-274 (275)
227 smart00219 TyrKc Tyrosine kina 100.0 3.2E-36 7E-41 310.8 24.1 250 418-683 1-258 (258)
228 cd05044 PTKc_c-ros Catalytic d 100.0 2.1E-36 4.5E-41 314.6 22.8 247 422-684 1-268 (269)
229 cd07874 STKc_JNK3 Catalytic do 100.0 1.6E-36 3.5E-41 328.7 22.7 260 414-682 15-311 (355)
230 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-36 3.4E-41 321.2 22.1 255 415-686 6-268 (303)
231 cd06609 STKc_MST3_like Catalyt 100.0 2.8E-36 6.1E-41 314.6 23.6 249 416-682 1-251 (274)
232 KOG4717 Serine/threonine prote 100.0 7.9E-37 1.7E-41 313.4 18.8 248 416-682 18-270 (864)
233 cd05057 PTKc_EGFR_like Catalyt 100.0 2.9E-36 6.3E-41 315.4 23.6 255 416-687 7-269 (279)
234 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.2E-36 4.7E-41 317.2 22.6 255 415-684 4-268 (284)
235 cd06655 STKc_PAK2 Catalytic do 100.0 2.6E-36 5.6E-41 318.4 23.2 250 416-682 19-269 (296)
236 PTZ00266 NIMA-related protein 100.0 1.4E-36 3.1E-41 349.9 22.9 256 411-681 8-294 (1021)
237 cd07875 STKc_JNK1 Catalytic do 100.0 2.6E-36 5.6E-41 328.1 23.6 259 415-682 23-318 (364)
238 cd06631 STKc_YSK4 Catalytic do 100.0 5.3E-36 1.1E-40 310.9 24.8 250 417-681 1-261 (265)
239 PHA03209 serine/threonine kina 100.0 2.7E-36 5.9E-41 326.5 23.5 192 414-617 64-256 (357)
240 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.3E-36 1.1E-40 311.4 24.7 251 422-684 1-267 (268)
241 PHA03207 serine/threonine kina 100.0 2.3E-36 5E-41 331.2 22.6 258 415-682 91-375 (392)
242 cd07832 STKc_CCRK Catalytic do 100.0 3.5E-36 7.6E-41 315.9 22.8 262 417-682 1-282 (286)
243 cd06651 STKc_MEKK3 Catalytic d 100.0 8.3E-36 1.8E-40 309.6 25.1 249 416-681 2-260 (266)
244 cd06640 STKc_MST4 Catalytic do 100.0 8.9E-36 1.9E-40 311.3 25.5 247 417-682 5-253 (277)
245 cd08223 STKc_Nek4 Catalytic do 100.0 5.3E-36 1.2E-40 309.3 23.5 249 417-682 1-254 (257)
246 cd07861 STKc_CDK1_euk Catalyti 100.0 3.4E-36 7.3E-41 315.8 22.4 260 417-681 1-281 (285)
247 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.8E-36 1.3E-40 314.2 24.1 262 416-682 1-283 (286)
248 cd08528 STKc_Nek10 Catalytic d 100.0 6.6E-36 1.4E-40 310.9 24.3 252 417-684 1-268 (269)
249 cd07868 STKc_CDK8 Catalytic do 100.0 2.1E-36 4.5E-41 322.6 21.0 193 421-619 6-218 (317)
250 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.4E-36 5.2E-41 315.6 20.7 247 417-682 5-253 (277)
251 KOG0596 Dual specificity; seri 100.0 5.5E-37 1.2E-41 318.6 15.5 256 411-682 356-627 (677)
252 cd08227 PK_STRAD_alpha Pseudok 100.0 6.1E-36 1.3E-40 320.3 24.3 256 420-682 2-307 (327)
253 PTZ00284 protein kinase; Provi 100.0 4.6E-36 1E-40 336.4 24.0 263 410-682 123-438 (467)
254 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-36 3.3E-41 325.4 19.1 240 424-681 1-252 (330)
255 cd05083 PTKc_Chk Catalytic dom 100.0 5.3E-36 1.1E-40 308.8 22.3 246 416-685 6-253 (254)
256 cd06638 STKc_myosinIIIA Cataly 100.0 5.2E-36 1.1E-40 314.6 22.2 257 410-682 12-283 (286)
257 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.2E-36 4.8E-41 317.4 19.3 261 416-681 1-282 (286)
258 cd08218 STKc_Nek1 Catalytic do 100.0 1.2E-35 2.5E-40 306.6 24.1 249 417-682 1-253 (256)
259 cd06626 STKc_MEKK4 Catalytic d 100.0 9.9E-36 2.1E-40 308.5 23.7 251 417-681 1-260 (264)
260 cd07839 STKc_CDK5 Catalytic do 100.0 3.1E-36 6.8E-41 315.9 20.1 260 417-681 1-280 (284)
261 cd06632 STKc_MEKK1_plant Catal 100.0 9.9E-36 2.1E-40 307.3 23.4 248 417-682 1-255 (258)
262 cd06658 STKc_PAK5 Catalytic do 100.0 3.6E-36 7.9E-41 316.6 20.4 249 417-682 23-272 (292)
263 cd06652 STKc_MEKK2 Catalytic d 100.0 1.7E-35 3.8E-40 307.0 25.0 250 416-682 2-261 (265)
264 cd07833 STKc_CDKL Catalytic do 100.0 7.7E-36 1.7E-40 313.6 22.2 263 416-682 1-285 (288)
265 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.8E-36 1.7E-40 313.3 22.2 252 416-682 1-262 (286)
266 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.7E-35 5.9E-40 305.7 26.0 255 416-681 1-263 (267)
267 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-35 2.6E-40 308.6 23.2 252 417-681 1-263 (268)
268 cd05609 STKc_MAST Catalytic do 100.0 1.1E-35 2.3E-40 315.3 23.1 255 416-685 1-273 (305)
269 cd06659 STKc_PAK6 Catalytic do 100.0 7.9E-36 1.7E-40 314.8 21.7 248 418-682 23-271 (297)
270 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-35 2.4E-40 313.1 22.6 250 416-682 19-269 (293)
271 cd08217 STKc_Nek2 Catalytic do 100.0 1.3E-35 2.9E-40 307.4 22.9 252 417-682 1-262 (265)
272 cd07867 STKc_CDC2L6 Catalytic 100.0 6.5E-36 1.4E-40 318.8 21.0 193 421-619 6-218 (317)
273 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-35 2.9E-40 313.5 23.2 261 417-682 1-282 (298)
274 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.9E-36 1.1E-40 323.3 20.0 259 414-682 13-298 (343)
275 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.3E-35 5E-40 307.3 24.4 254 417-682 2-269 (272)
276 KOG0667 Dual-specificity tyros 100.0 5.8E-36 1.3E-40 320.6 20.2 257 417-682 187-502 (586)
277 cd06639 STKc_myosinIIIB Cataly 100.0 1.8E-35 3.9E-40 311.4 23.7 258 409-682 15-287 (291)
278 cd06605 PKc_MAPKK Catalytic do 100.0 1.3E-35 2.7E-40 307.9 22.2 251 416-682 1-257 (265)
279 cd05574 STKc_phototropin_like 100.0 1.6E-35 3.5E-40 315.6 23.5 249 416-679 1-282 (316)
280 cd06648 STKc_PAK_II Catalytic 100.0 2.6E-35 5.5E-40 309.1 24.1 248 417-681 20-268 (285)
281 cd06614 STKc_PAK Catalytic dom 100.0 3.2E-35 6.9E-40 308.7 24.9 254 413-682 16-270 (286)
282 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.1E-35 4.6E-40 307.7 23.3 253 418-686 1-272 (273)
283 cd07844 STKc_PCTAIRE_like Cata 100.0 1.2E-35 2.7E-40 312.6 21.7 261 416-681 5-287 (291)
284 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4.3E-35 9.4E-40 307.8 25.7 257 416-682 1-266 (287)
285 cd06608 STKc_myosinIII_like Ca 100.0 2E-35 4.3E-40 308.0 22.7 254 413-682 3-272 (275)
286 cd06607 STKc_TAO Catalytic dom 100.0 2.7E-35 5.8E-40 312.6 24.0 248 415-683 14-268 (307)
287 KOG0986 G protein-coupled rece 100.0 1E-36 2.2E-41 309.3 12.4 249 414-677 183-436 (591)
288 cd07843 STKc_CDC2L1 Catalytic 100.0 2.5E-35 5.4E-40 310.6 23.5 261 416-681 5-289 (293)
289 cd08220 STKc_Nek8 Catalytic do 100.0 2.5E-35 5.5E-40 303.9 23.0 248 417-682 1-253 (256)
290 cd06917 STKc_NAK1_like Catalyt 100.0 3.5E-35 7.5E-40 306.9 24.3 248 417-682 2-255 (277)
291 KOG0690 Serine/threonine prote 100.0 7.3E-37 1.6E-41 297.7 10.6 242 414-674 166-411 (516)
292 cd05580 STKc_PKA Catalytic dom 100.0 2.7E-35 5.8E-40 309.9 23.1 244 416-681 1-253 (290)
293 KOG0579 Ste20-like serine/thre 100.0 7.3E-37 1.6E-41 320.0 10.8 252 416-682 32-289 (1187)
294 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-35 4E-40 309.8 21.6 255 410-681 10-278 (282)
295 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.7E-35 5.8E-40 310.1 22.9 263 414-681 3-287 (291)
296 cd06641 STKc_MST3 Catalytic do 100.0 4E-35 8.7E-40 306.4 23.7 247 417-682 5-253 (277)
297 cd05122 PKc_STE Catalytic doma 100.0 6.5E-35 1.4E-39 299.6 24.7 250 417-682 1-251 (253)
298 cd06617 PKc_MKK3_6 Catalytic d 100.0 2E-35 4.3E-40 309.6 20.9 250 416-682 1-261 (283)
299 cd06635 STKc_TAO1 Catalytic do 100.0 7.1E-35 1.5E-39 310.6 25.3 249 417-686 26-281 (317)
300 cd07831 STKc_MOK Catalytic dom 100.0 4.2E-35 9.2E-40 307.0 23.1 258 418-682 1-279 (282)
301 cd07864 STKc_CDK12 Catalytic d 100.0 4.8E-35 1E-39 309.9 23.4 266 413-682 4-299 (302)
302 cd06623 PKc_MAPKK_plant_like C 100.0 8.3E-35 1.8E-39 301.5 24.7 252 416-682 1-256 (264)
303 cd07840 STKc_CDK9_like Catalyt 100.0 2.9E-35 6.2E-40 308.9 20.5 261 418-682 1-284 (287)
304 cd07850 STKc_JNK Catalytic dom 100.0 8E-35 1.7E-39 315.1 24.3 259 415-682 15-311 (353)
305 cd07860 STKc_CDK2_3 Catalytic 100.0 2.8E-35 6.2E-40 308.7 19.8 260 417-682 1-281 (284)
306 cd08225 STKc_Nek5 Catalytic do 100.0 4.5E-35 9.7E-40 302.3 20.9 249 417-682 1-254 (257)
307 KOG0584 Serine/threonine prote 100.0 6.3E-36 1.4E-40 316.9 14.2 245 419-682 43-296 (632)
308 cd06616 PKc_MKK4 Catalytic dom 100.0 4.5E-35 9.8E-40 307.8 20.5 253 417-682 5-267 (288)
309 cd05578 STKc_Yank1 Catalytic d 100.0 4.1E-35 9E-40 302.9 19.3 247 417-680 1-253 (258)
310 cd07845 STKc_CDK10 Catalytic d 100.0 1.3E-34 2.8E-39 307.6 23.2 263 415-682 6-290 (309)
311 cd07849 STKc_ERK1_2_like Catal 100.0 7.1E-35 1.5E-39 313.3 21.2 268 415-688 4-300 (336)
312 cd05572 STKc_cGK_PKG Catalytic 100.0 1.4E-34 3E-39 299.7 22.6 242 424-681 1-251 (262)
313 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-34 3.1E-39 305.2 23.1 262 416-682 1-291 (295)
314 cd07835 STKc_CDK1_like Catalyt 100.0 6.5E-35 1.4E-39 305.8 20.2 260 418-682 1-280 (283)
315 cd07836 STKc_Pho85 Catalytic d 100.0 1.5E-34 3.3E-39 303.2 22.8 260 417-681 1-280 (284)
316 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-34 3.8E-39 301.5 23.2 240 424-678 1-245 (277)
317 cd05633 STKc_GRK3 Catalytic do 100.0 1.2E-34 2.6E-39 303.0 21.9 242 423-682 1-255 (279)
318 cd06606 STKc_MAPKKK Catalytic 100.0 3E-34 6.4E-39 296.0 24.3 251 417-682 1-257 (260)
319 cd06657 STKc_PAK4 Catalytic do 100.0 1.8E-34 4E-39 303.5 23.0 244 422-682 26-270 (292)
320 KOG0983 Mitogen-activated prot 100.0 1.1E-35 2.5E-40 283.4 12.4 253 414-682 90-349 (391)
321 cd08215 STKc_Nek Catalytic dom 100.0 3.6E-34 7.9E-39 295.3 24.7 249 417-682 1-255 (258)
322 PLN00009 cyclin-dependent kina 100.0 2.1E-34 4.5E-39 303.8 23.1 261 416-682 2-284 (294)
323 cd07842 STKc_CDK8_like Catalyt 100.0 1.9E-34 4.1E-39 307.3 22.8 200 417-620 1-219 (316)
324 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.6E-34 9.9E-39 296.2 24.6 249 416-681 2-260 (264)
325 cd06634 STKc_TAO2 Catalytic do 100.0 2.7E-34 5.9E-39 304.8 23.4 249 415-684 14-269 (308)
326 cd07865 STKc_CDK9 Catalytic do 100.0 2.7E-34 6E-39 305.2 23.5 264 415-682 11-307 (310)
327 cd08530 STKc_CNK2-like Catalyt 100.0 2.1E-34 4.6E-39 297.0 21.9 247 417-682 1-253 (256)
328 KOG0612 Rho-associated, coiled 100.0 1.3E-35 2.9E-40 331.0 13.7 256 410-680 69-336 (1317)
329 PHA02882 putative serine/threo 100.0 3.9E-34 8.5E-39 301.4 24.0 253 415-684 11-294 (294)
330 cd05118 STKc_CMGC Catalytic do 100.0 2.2E-34 4.7E-39 301.7 21.8 260 418-682 1-280 (283)
331 cd05579 STKc_MAST_like Catalyt 100.0 1.7E-34 3.6E-39 299.2 20.6 245 424-684 1-256 (265)
332 cd06627 STKc_Cdc7_like Catalyt 100.0 4.9E-34 1.1E-38 293.8 23.8 247 417-681 1-250 (254)
333 KOG4645 MAPKKK (MAP kinase kin 100.0 1.9E-36 4.2E-41 341.8 6.1 254 412-682 1231-1494(1509)
334 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-34 2.4E-39 311.6 19.5 263 415-682 4-294 (334)
335 KOG0586 Serine/threonine prote 100.0 5.8E-35 1.3E-39 309.5 16.9 249 414-682 54-306 (596)
336 KOG4250 TANK binding protein k 100.0 3.7E-35 8E-40 314.8 15.3 265 417-686 14-310 (732)
337 cd06633 STKc_TAO3 Catalytic do 100.0 6E-34 1.3E-38 302.8 24.4 244 418-682 23-273 (313)
338 KOG1025 Epidermal growth facto 100.0 1.1E-35 2.4E-40 320.3 11.1 253 417-686 697-957 (1177)
339 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.7E-34 1E-38 307.0 23.6 266 415-686 4-297 (337)
340 cd07852 STKc_MAPK15 Catalytic 100.0 2.2E-34 4.7E-39 309.8 20.9 263 414-682 5-295 (337)
341 cd05611 STKc_Rim15_like Cataly 100.0 5.1E-34 1.1E-38 295.1 22.9 244 422-684 2-250 (260)
342 PHA03390 pk1 serine/threonine- 100.0 7.8E-34 1.7E-38 294.8 24.2 244 412-681 10-261 (267)
343 cd07866 STKc_BUR1 Catalytic do 100.0 2.7E-34 5.8E-39 305.4 21.2 263 415-681 7-307 (311)
344 PHA03210 serine/threonine kina 100.0 1.7E-34 3.6E-39 325.0 20.6 265 414-682 146-454 (501)
345 cd05583 STKc_MSK_N N-terminal 100.0 3.5E-34 7.5E-39 301.1 21.6 254 417-685 1-266 (288)
346 KOG3653 Transforming growth fa 100.0 1.2E-34 2.7E-39 296.6 17.2 261 416-686 210-503 (534)
347 cd07838 STKc_CDK4_6_like Catal 100.0 1E-33 2.2E-38 297.2 24.6 258 418-681 1-283 (287)
348 cd06618 PKc_MKK7 Catalytic dom 100.0 4.4E-34 9.4E-39 301.6 21.9 252 415-682 14-273 (296)
349 KOG1035 eIF-2alpha kinase GCN2 100.0 7.1E-35 1.5E-39 327.8 16.4 253 414-682 477-871 (1351)
350 cd05613 STKc_MSK1_N N-terminal 100.0 6.4E-34 1.4E-38 299.4 22.7 250 417-681 1-267 (290)
351 cd07829 STKc_CDK_like Catalyti 100.0 5.6E-34 1.2E-38 298.4 21.7 260 418-682 1-279 (282)
352 cd05581 STKc_PDK1 Catalytic do 100.0 4.4E-34 9.6E-39 298.8 20.0 248 416-681 1-276 (280)
353 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-33 3.5E-38 294.3 24.2 241 423-681 1-254 (278)
354 KOG0666 Cyclin C-dependent kin 100.0 3.1E-35 6.8E-40 285.2 10.0 201 415-619 23-242 (438)
355 KOG0200 Fibroblast/platelet-de 100.0 6.8E-34 1.5E-38 324.7 22.8 254 416-685 296-578 (609)
356 cd08216 PK_STRAD Pseudokinase 100.0 1.4E-33 3.1E-38 300.3 23.9 255 422-682 8-295 (314)
357 cd08226 PK_STRAD_beta Pseudoki 100.0 1.5E-33 3.3E-38 301.9 24.1 256 422-682 4-308 (328)
358 cd07834 STKc_MAPK Catalytic do 100.0 5.8E-34 1.3E-38 305.6 20.3 261 417-682 1-289 (330)
359 PTZ00024 cyclin-dependent prot 100.0 1.4E-33 3.1E-38 303.2 23.0 261 417-682 9-313 (335)
360 cd07830 STKc_MAK_like Catalyti 100.0 5.3E-34 1.2E-38 298.8 19.0 259 418-682 1-280 (283)
361 cd07879 STKc_p38delta_MAPK13 C 100.0 9.7E-34 2.1E-38 305.1 21.3 263 415-688 14-305 (342)
362 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.8E-34 1.7E-38 305.8 19.6 261 416-682 5-300 (342)
363 cd08222 STKc_Nek11 Catalytic d 100.0 1.5E-33 3.4E-38 291.5 20.5 248 417-682 1-257 (260)
364 KOG2052 Activin A type IB rece 100.0 8.3E-34 1.8E-38 288.4 17.7 264 414-688 209-505 (513)
365 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.9E-33 1.1E-37 299.9 24.7 263 410-682 11-300 (345)
366 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.7E-33 5.8E-38 301.7 22.4 258 414-681 13-297 (343)
367 cd07857 STKc_MPK1 Catalytic do 100.0 3.9E-33 8.4E-38 299.3 23.0 261 417-682 1-292 (332)
368 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.2E-33 6.9E-38 299.1 22.2 260 413-682 7-288 (328)
369 KOG0696 Serine/threonine prote 100.0 1.5E-34 3.3E-39 289.5 10.6 242 415-675 348-594 (683)
370 KOG0607 MAP kinase-interacting 100.0 5.4E-34 1.2E-38 277.4 13.2 254 421-681 83-360 (463)
371 KOG1151 Tousled-like protein k 100.0 2.8E-34 6E-39 289.8 11.5 255 414-679 461-738 (775)
372 KOG4236 Serine/threonine prote 100.0 4.2E-34 9.1E-39 294.1 12.8 244 420-680 568-817 (888)
373 KOG0662 Cyclin-dependent kinas 100.0 2.5E-33 5.5E-38 251.3 15.7 260 417-681 3-282 (292)
374 cd07851 STKc_p38 Catalytic dom 100.0 2.5E-33 5.5E-38 302.0 18.4 259 414-682 13-298 (343)
375 KOG1006 Mitogen-activated prot 100.0 7.1E-35 1.5E-39 277.1 5.5 254 417-682 65-327 (361)
376 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-32 2.6E-37 282.9 21.5 236 424-678 1-240 (250)
377 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-32 2.9E-37 319.1 24.1 145 416-564 4-152 (669)
378 KOG0603 Ribosomal protein S6 k 100.0 3.1E-33 6.8E-38 298.0 13.6 240 414-682 320-563 (612)
379 KOG0614 cGMP-dependent protein 100.0 4.1E-34 8.8E-39 293.6 5.2 243 415-675 419-665 (732)
380 KOG0604 MAP kinase-activated p 100.0 9.8E-33 2.1E-37 266.8 14.0 252 415-682 60-322 (400)
381 cd05576 STKc_RPK118_like Catal 100.0 3.6E-32 7.8E-37 277.1 18.3 220 427-677 4-224 (237)
382 KOG0587 Traf2- and Nck-interac 100.0 4.6E-32 1E-36 296.3 18.6 256 410-682 13-282 (953)
383 KOG0608 Warts/lats-like serine 100.0 3.3E-32 7.2E-37 285.7 16.7 209 408-620 618-874 (1034)
384 KOG0669 Cyclin T-dependent kin 100.0 1E-33 2.2E-38 267.0 4.8 264 415-682 16-315 (376)
385 KOG1024 Receptor-like protein 100.0 5E-32 1.1E-36 270.3 14.6 261 408-684 276-553 (563)
386 KOG0695 Serine/threonine prote 100.0 6.5E-32 1.4E-36 264.0 14.6 247 414-675 248-503 (593)
387 PLN03224 probable serine/threo 100.0 2.1E-31 4.5E-36 293.4 20.2 257 413-682 142-500 (507)
388 PLN00113 leucine-rich repeat r 100.0 8.9E-32 1.9E-36 329.2 18.2 277 16-292 139-443 (968)
389 smart00220 S_TKc Serine/Threon 100.0 6.5E-31 1.4E-35 268.0 21.5 237 428-681 1-240 (244)
390 PLN03225 Serine/threonine-prot 100.0 2.2E-31 4.8E-36 301.1 19.4 258 414-682 130-450 (566)
391 KOG0984 Mitogen-activated prot 100.0 2.3E-31 5E-36 244.3 11.6 201 414-619 44-254 (282)
392 KOG0671 LAMMER dual specificit 100.0 4E-31 8.7E-36 264.7 11.1 258 414-681 87-405 (415)
393 KOG0664 Nemo-like MAPK-related 100.0 2.8E-32 6.1E-37 259.9 1.7 262 417-683 54-344 (449)
394 KOG0668 Casein kinase II, alph 100.0 4.9E-30 1.1E-34 238.9 12.6 255 415-681 37-321 (338)
395 KOG1027 Serine/threonine prote 100.0 3.1E-30 6.7E-35 280.8 11.7 244 417-681 510-766 (903)
396 cd00180 PKc Catalytic domain o 100.0 4.7E-28 1E-32 240.9 23.1 211 424-683 1-215 (215)
397 KOG0576 Mitogen-activated prot 100.0 8.3E-30 1.8E-34 270.3 5.7 253 414-680 13-269 (829)
398 KOG4194 Membrane glycoprotein 100.0 2.2E-30 4.7E-35 270.4 1.2 309 13-323 145-461 (873)
399 KOG1290 Serine/threonine prote 100.0 5.1E-28 1.1E-32 248.6 18.0 260 415-682 77-550 (590)
400 KOG1152 Signal transduction se 100.0 4.8E-29 1E-33 260.3 9.5 196 416-618 561-770 (772)
401 smart00221 STYKc Protein kinas 100.0 2E-27 4.2E-32 239.6 20.0 199 418-619 1-202 (225)
402 KOG0665 Jun-N-terminal kinase 100.0 2E-28 4.3E-33 239.8 12.0 255 416-682 17-310 (369)
403 KOG1345 Serine/threonine kinas 99.9 6.7E-28 1.5E-32 230.3 11.5 255 414-684 22-286 (378)
404 KOG4194 Membrane glycoprotein 99.9 2.9E-29 6.3E-34 262.0 -0.0 294 12-306 97-421 (873)
405 KOG1167 Serine/threonine prote 99.9 5.1E-27 1.1E-31 238.8 13.6 200 410-618 30-279 (418)
406 KOG0670 U4/U6-associated splic 99.9 3.4E-27 7.3E-32 243.5 10.3 261 413-681 429-745 (752)
407 KOG0444 Cytoskeletal regulator 99.9 6.5E-28 1.4E-32 253.1 -3.0 274 11-290 72-375 (1255)
408 PLN00181 protein SPA1-RELATED; 99.9 1.9E-26 4.1E-31 274.5 8.5 196 468-682 28-265 (793)
409 smart00750 KIND kinase non-cat 99.9 7.5E-25 1.6E-29 212.2 14.9 166 497-685 1-168 (176)
410 KOG0444 Cytoskeletal regulator 99.9 2.2E-27 4.7E-32 249.2 -6.8 269 16-291 54-353 (1255)
411 KOG1164 Casein kinase (serine/ 99.9 1.6E-23 3.5E-28 222.7 20.8 259 417-688 19-299 (322)
412 PRK09188 serine/threonine prot 99.9 3.1E-24 6.8E-29 226.9 13.0 167 411-591 13-194 (365)
413 KOG0195 Integrin-linked kinase 99.9 1.6E-24 3.4E-29 207.0 6.4 246 419-686 193-446 (448)
414 KOG0472 Leucine-rich repeat pr 99.9 4.9E-26 1.1E-30 228.5 -5.3 271 10-290 153-541 (565)
415 KOG1163 Casein kinase (serine/ 99.9 8.4E-23 1.8E-27 192.4 14.6 265 414-690 13-288 (341)
416 KOG1165 Casein kinase (serine/ 99.9 2E-22 4.4E-27 198.3 16.0 257 417-685 29-298 (449)
417 KOG0472 Leucine-rich repeat pr 99.9 1.1E-25 2.3E-30 226.2 -8.8 274 8-292 36-312 (565)
418 COG0515 SPS1 Serine/threonine 99.9 3.3E-21 7.2E-26 205.8 25.3 255 418-682 2-275 (384)
419 KOG0590 Checkpoint kinase and 99.9 1.2E-22 2.6E-27 229.1 4.7 254 419-682 321-585 (601)
420 PRK10359 lipopolysaccharide co 99.9 9.3E-22 2E-26 193.2 10.2 171 414-611 29-216 (232)
421 cd05147 RIO1_euk RIO kinase fa 99.8 3.3E-21 7.2E-26 187.7 11.5 140 421-567 2-168 (190)
422 KOG1023 Natriuretic peptide re 99.8 4.6E-21 9.9E-26 206.0 11.4 216 466-688 1-226 (484)
423 KOG1240 Protein kinase contain 99.8 1.3E-21 2.8E-26 218.9 6.0 250 417-685 24-294 (1431)
424 PRK12274 serine/threonine prot 99.8 4E-20 8.6E-25 177.5 14.7 187 419-621 5-211 (218)
425 KOG0603 Ribosomal protein S6 k 99.8 1.7E-21 3.6E-26 208.7 5.0 225 423-676 1-232 (612)
426 cd05145 RIO1_like RIO kinase f 99.8 6.8E-20 1.5E-24 179.3 14.5 141 421-568 2-169 (190)
427 KOG4237 Extracellular matrix p 99.8 9.1E-23 2E-27 205.1 -6.5 251 43-293 69-362 (498)
428 KOG4237 Extracellular matrix p 99.8 1.8E-22 3.8E-27 203.0 -5.9 279 44-325 49-370 (498)
429 PRK15387 E3 ubiquitin-protein 99.8 2.3E-19 5E-24 204.8 15.8 239 19-293 203-461 (788)
430 PRK15370 E3 ubiquitin-protein 99.8 1E-19 2.3E-24 209.1 12.3 244 18-291 179-429 (754)
431 PRK10345 hypothetical protein; 99.8 6.5E-19 1.4E-23 173.0 14.5 136 419-563 5-156 (210)
432 PF14531 Kinase-like: Kinase-l 99.8 2.7E-19 5.8E-24 181.2 11.9 231 417-673 13-288 (288)
433 KOG1166 Mitotic checkpoint ser 99.8 3.3E-19 7.1E-24 204.5 12.9 251 410-686 692-953 (974)
434 PRK15387 E3 ubiquitin-protein 99.8 4.5E-19 9.8E-24 202.4 13.2 226 18-275 223-465 (788)
435 PLN03210 Resistant to P. syrin 99.8 3.5E-18 7.7E-23 209.9 18.7 260 15-287 609-903 (1153)
436 PRK15370 E3 ubiquitin-protein 99.8 1.7E-18 3.7E-23 199.2 12.8 226 41-293 178-404 (754)
437 KOG0618 Serine/threonine phosp 99.8 1.2E-20 2.5E-25 208.4 -4.8 262 18-288 220-487 (1081)
438 PLN03210 Resistant to P. syrin 99.8 9.9E-18 2.1E-22 206.0 20.1 271 12-292 553-861 (1153)
439 PRK14879 serine/threonine prot 99.8 1.1E-17 2.4E-22 167.1 14.8 134 422-565 2-143 (211)
440 KOG0617 Ras suppressor protein 99.7 2.7E-20 5.9E-25 166.6 -4.5 161 84-273 29-190 (264)
441 KOG0618 Serine/threonine phosp 99.7 6.3E-20 1.4E-24 202.7 -3.6 269 16-293 240-516 (1081)
442 cd00116 LRR_RI Leucine-rich re 99.7 6.8E-20 1.5E-24 195.5 -4.1 269 21-289 2-319 (319)
443 smart00090 RIO RIO-like kinase 99.7 1E-17 2.2E-22 168.8 11.7 144 417-568 29-200 (237)
444 TIGR03724 arch_bud32 Kae1-asso 99.7 2.3E-17 4.9E-22 163.2 13.4 130 423-565 1-138 (199)
445 KOG4158 BRPK/PTEN-induced prot 99.7 3E-17 6.5E-22 165.5 13.5 196 470-683 274-511 (598)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.7E-18 8.1E-23 179.7 6.1 172 485-678 329-508 (516)
447 KOG0617 Ras suppressor protein 99.7 1.3E-19 2.8E-24 162.3 -4.2 161 108-295 29-191 (264)
448 cd05144 RIO2_C RIO kinase fami 99.7 3.4E-17 7.4E-22 161.6 12.4 140 415-568 14-177 (198)
449 PRK09605 bifunctional UGMP fam 99.7 5.1E-17 1.1E-21 184.7 14.1 138 415-565 332-476 (535)
450 KOG0606 Microtubule-associated 99.7 1.6E-17 3.4E-22 186.7 9.3 212 414-677 81-307 (1205)
451 cd00116 LRR_RI Leucine-rich re 99.7 7.3E-19 1.6E-23 187.6 -2.4 255 13-267 19-319 (319)
452 cd05120 APH_ChoK_like Aminogly 99.6 2.2E-15 4.8E-20 141.5 12.2 135 420-565 2-138 (155)
453 cd05119 RIO RIO kinase family, 99.6 2.3E-15 5.1E-20 147.1 11.4 136 421-567 2-165 (187)
454 PRK01723 3-deoxy-D-manno-octul 99.6 1.2E-14 2.6E-19 146.8 14.1 135 421-565 36-191 (239)
455 KOG0590 Checkpoint kinase and 99.6 3.1E-16 6.8E-21 177.3 -0.0 251 416-680 20-284 (601)
456 KOG0532 Leucine-rich repeat (L 99.5 1.6E-15 3.6E-20 159.8 -4.2 168 69-268 80-247 (722)
457 TIGR01982 UbiB 2-polyprenylphe 99.5 1.9E-13 4.1E-18 150.1 11.7 145 417-568 119-309 (437)
458 KOG0532 Leucine-rich repeat (L 99.4 3.9E-15 8.5E-20 156.9 -3.2 184 85-301 72-257 (722)
459 KOG1266 Protein kinase [Signal 99.4 5.6E-13 1.2E-17 132.1 7.2 198 464-680 119-329 (458)
460 cd05151 ChoK Choline Kinase (C 99.4 2.1E-12 4.6E-17 124.0 10.1 130 422-565 4-136 (170)
461 COG4886 Leucine-rich repeat (L 99.3 9.9E-13 2.1E-17 144.6 7.4 184 84-274 112-296 (394)
462 KOG0601 Cyclin-dependent kinas 99.3 4E-12 8.8E-17 137.3 8.7 247 417-681 115-378 (524)
463 COG4886 Leucine-rich repeat (L 99.3 1.9E-12 4.2E-17 142.2 6.0 200 21-228 97-298 (394)
464 PRK04750 ubiB putative ubiquin 99.3 2.7E-11 5.9E-16 134.5 13.1 148 415-569 119-317 (537)
465 KOG1243 Protein kinase [Genera 99.3 7.1E-11 1.5E-15 128.7 14.9 228 437-686 34-263 (690)
466 cd05146 RIO3_euk RIO kinase fa 99.2 1.1E-10 2.3E-15 112.7 13.1 136 422-567 3-175 (197)
467 COG3642 Mn2+-dependent serine/ 99.2 1.4E-10 3.1E-15 107.4 11.8 131 422-565 2-140 (204)
468 PLN03150 hypothetical protein; 99.2 4E-11 8.7E-16 138.0 8.5 93 90-182 420-512 (623)
469 KOG1909 Ran GTPase-activating 99.2 9.2E-13 2E-17 132.0 -4.8 166 35-200 24-229 (382)
470 KOG0601 Cyclin-dependent kinas 99.1 4.4E-11 9.5E-16 129.4 6.7 246 414-684 263-516 (524)
471 cd05154 ACAD10_11_like Acyl-Co 99.1 2E-10 4.4E-15 115.4 11.1 142 422-565 4-206 (223)
472 KOG3087 Serine/threonine prote 99.1 3.3E-10 7.1E-15 104.4 11.2 142 420-565 11-165 (229)
473 PLN03150 hypothetical protein; 99.1 6.8E-11 1.5E-15 136.2 8.4 106 68-173 422-528 (623)
474 KOG3741 Poly(A) ribonuclease s 99.1 1.6E-09 3.4E-14 114.6 15.3 168 428-616 288-475 (655)
475 KOG1259 Nischarin, modulator o 99.1 1.8E-11 3.9E-16 119.8 0.4 128 89-269 285-413 (490)
476 KOG3207 Beta-tubulin folding c 99.1 2.4E-11 5.2E-16 125.2 0.3 116 83-198 141-260 (505)
477 KOG1259 Nischarin, modulator o 99.1 2.4E-11 5.2E-16 118.9 -0.0 212 74-293 200-415 (490)
478 KOG0606 Microtubule-associated 99.0 1.1E-10 2.4E-15 132.4 4.5 249 414-677 802-1084(1205)
479 PF14580 LRR_9: Leucine-rich r 99.0 1.2E-10 2.7E-15 110.0 3.4 104 86-192 40-148 (175)
480 KOG3207 Beta-tubulin folding c 99.0 4.5E-11 9.7E-16 123.2 -0.1 205 85-291 118-340 (505)
481 KOG0531 Protein phosphatase 1, 99.0 5E-11 1.1E-15 131.4 -0.6 218 39-268 70-290 (414)
482 COG4248 Uncharacterized protei 99.0 2.1E-08 4.5E-13 103.5 16.6 258 420-688 15-302 (637)
483 PF14580 LRR_9: Leucine-rich r 99.0 6.2E-10 1.3E-14 105.3 4.8 106 84-194 15-123 (175)
484 KOG1909 Ran GTPase-activating 98.9 5E-11 1.1E-15 119.7 -4.8 236 14-268 27-311 (382)
485 PRK15123 lipopolysaccharide co 98.9 2E-08 4.4E-13 102.6 13.7 139 423-565 29-194 (268)
486 KOG0531 Protein phosphatase 1, 98.9 1.4E-10 3.1E-15 127.7 -2.4 238 41-290 49-290 (414)
487 PF01163 RIO1: RIO1 family; I 98.9 8.3E-09 1.8E-13 99.3 9.7 125 431-566 1-156 (188)
488 PF13855 LRR_8: Leucine rich r 98.8 2.5E-09 5.5E-14 83.1 3.8 59 89-147 2-60 (61)
489 PF13855 LRR_8: Leucine rich r 98.8 4.3E-09 9.3E-14 81.8 4.1 61 112-172 1-61 (61)
490 COG0478 RIO-like serine/threon 98.8 3E-08 6.4E-13 97.8 10.6 135 418-565 93-251 (304)
491 KOG4658 Apoptotic ATPase [Sign 98.6 9.1E-09 2E-13 121.2 1.8 252 14-270 542-809 (889)
492 PF06293 Kdo: Lipopolysacchari 98.6 3.2E-07 6.9E-12 90.8 12.2 123 439-565 31-170 (206)
493 KOG4658 Apoptotic ATPase [Sign 98.6 2.4E-08 5.2E-13 117.6 4.8 250 39-292 521-785 (889)
494 KOG1859 Leucine-rich repeat pr 98.6 5.6E-10 1.2E-14 121.4 -8.3 180 81-269 102-293 (1096)
495 PRK09902 hypothetical protein; 98.6 7E-07 1.5E-11 86.4 13.2 141 419-564 21-178 (216)
496 KOG2137 Protein kinase [Signal 98.5 3.5E-08 7.5E-13 108.5 3.1 150 520-681 106-264 (700)
497 KOG1859 Leucine-rich repeat pr 98.5 2E-09 4.4E-14 117.2 -8.0 177 34-220 102-292 (1096)
498 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.1E-06 4.6E-11 86.0 14.1 138 422-565 7-182 (226)
499 KOG4579 Leucine-rich repeat (L 98.5 5.6E-09 1.2E-13 91.2 -4.1 109 90-202 29-141 (177)
500 KOG0576 Mitogen-activated prot 98.4 2.4E-08 5.2E-13 108.3 -1.2 190 413-617 239-430 (829)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-72 Score=687.42 Aligned_cols=660 Identities=27% Similarity=0.422 Sum_probs=412.5
Q ss_pred eeccceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcCCC
Q 004400 12 FWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTL 90 (756)
Q Consensus 12 ~~~~~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L 90 (756)
.+.+++.++.|+|++|++++.+|..+.++++|+.|+|++|.+++.+|..+..++.|+ +++.+|.+.+.+|..+.++++|
T Consensus 255 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 334 (968)
T PLN00113 255 SLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRL 334 (968)
T ss_pred hHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCC
Confidence 355566666666666666666666666666666666666666666666665555553 5555565555555555555556
Q ss_pred cEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCcc------------------------ccCCCCCCEEEeeCC
Q 004400 91 VNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKT------------------------FAKLTNMKDFRISDN 146 (756)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~------------------------~~~l~~L~~L~L~~N 146 (756)
+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|.. +..+++|+.|+|++|
T Consensus 335 ~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n 414 (968)
T PLN00113 335 QVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414 (968)
T ss_pred CEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCC
Confidence 66666555555555555555555555555555555544444 444555555555555
Q ss_pred cccccCChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCcc
Q 004400 147 QFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRY 226 (756)
Q Consensus 147 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~ 226 (756)
++++.+|..|.++++|+.|+|++|++++.+|..+..+++|+.|++++|.+....+..+...+|+.|+|++|++++.+|..
T Consensus 415 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~ 494 (968)
T PLN00113 415 SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRK 494 (968)
T ss_pred EeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChh
Confidence 55555555555555555555555555555555555555666666666655554444444456778888888888888888
Q ss_pred ccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCCCCCCcccccccCcc
Q 004400 227 LGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAESSCQKRSVT 304 (756)
Q Consensus 227 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~~~~~~~~~~~~~~~ 304 (756)
|..+++|+.|+|++|.+.+.+|..+..+++|+.|++++|.+++.+|..+ ++.|+.|++++|++++..+........+.
T Consensus 495 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 574 (968)
T PLN00113 495 LGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574 (968)
T ss_pred hhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccC
Confidence 8888888888888888888888888888888888888888888888776 67788888888888776655544444343
Q ss_pred cccccccccccCCccccccccccCcceeecCcccccC-CCCCC-CCCccccCCceeEE---cchhhhhh-hcccccccee
Q 004400 305 GIVSCLRSVQCPKTYYSLHINCGGKQVTANGNTTFEE-DTSEA-GPSTFSQSGTNWVL---SSTGHFLE-NGLKLGPYIQ 378 (756)
Q Consensus 305 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~ 378 (756)
.+....+...+........... ......|+..... ..... .+.........|.. ...+..+. ..+....++.
T Consensus 575 ~l~ls~N~l~~~~p~~~~~~~~--~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (968)
T PLN00113 575 QVNISHNHLHGSLPSTGAFLAI--NASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFI 652 (968)
T ss_pred EEeccCCcceeeCCCcchhccc--ChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHH
Confidence 3333222222110000000000 0000001100000 00000 00000000111211 11111111 0000001111
Q ss_pred ccccccccccchh-hhhhhcccccchhhhhhhhHHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccH
Q 004400 379 TNTSRLLMNDYQL-YTTARLSAISLTYYGFYLQIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGN 456 (756)
Q Consensus 379 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~ 456 (756)
....+........ ........... ..............|...+.||+|+||.||+|+. .++..||||++......
T Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-- 729 (968)
T PLN00113 653 RGRNNLELKRVENEDGTWELQFFDS-KVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-- 729 (968)
T ss_pred Hhhhccccccccccccccccccccc-ccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc--
Confidence 1100000000000 00000000000 0000112233345678889999999999999995 68899999998643221
Q ss_pred HHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 004400 457 REFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIK 536 (756)
Q Consensus 457 ~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~ 536 (756)
...|++++++++|||||+++++|.+++..++|||||++|+|.++++ .++|..+.+++.|+|+||+|||+.+.++
T Consensus 730 --~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 730 --PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred --cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 2346889999999999999999999999999999999999999985 4899999999999999999999776667
Q ss_pred eEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCC
Q 004400 537 VVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSN 616 (756)
Q Consensus 537 iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p 616 (756)
|+||||||+||+++.++.+++. ||.+...... ....||+.|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p 877 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSP 877 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCC
Confidence 9999999999999999888875 6655432211 223688999999999999999999999999999999999999
Q ss_pred CCcc--chhhHHHHHHHHHhcCccccccccCCCC--CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 617 VTKE--DMFYLLDWALVLKEQGKLMELVDTNPGS--NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 617 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
|... .......|+............+++.... ....++...+.+++.+||+.+|++||+|.||++.|++...
T Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 878 ADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 8533 2234556665544444344444443322 3345667788999999999999999999999999996544
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-54 Score=462.23 Aligned_cols=280 Identities=53% Similarity=0.883 Sum_probs=248.7
Q ss_pred hhhhHHHhhcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-
Q 004400 407 FYLQIKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN- 485 (756)
Q Consensus 407 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 485 (756)
.|.+++.||++|...+.||+|+||.||+|.+.+|+.||||++........++|.+|++++.+++|||+|+++|||.+.+
T Consensus 66 s~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~ 145 (361)
T KOG1187|consen 66 SYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE 145 (361)
T ss_pred eHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc
Confidence 3789999999999999999999999999999999999999887643321567999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRL-KLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
..+||||||++|+|.++|+.... .++|..|.+||.++|+||+|||+.+.++||||||||+|||+|+++.+||+|||+|+
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~ 225 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAK 225 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcc
Confidence 59999999999999999997665 89999999999999999999999998899999999999999999999999999997
Q ss_pred cCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCc---cchhhHHHHHHHHHhcCccccc
Q 004400 565 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTK---EDMFYLLDWALVLKEQGKLMEL 641 (756)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~---~~~~~~~~~~~~~~~~~~~~~~ 641 (756)
..........+...||.+|+|||++..+..+.|+|||||||+++|++||+.|... .....+.+|+......+++.++
T Consensus 226 ~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~ei 305 (361)
T KOG1187|consen 226 LGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREI 305 (361)
T ss_pred cCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhhe
Confidence 6554222222211799999999999999999999999999999999999988853 2345589999888888899999
Q ss_pred cccCCC-CCCCH-HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 642 VDTNPG-SNFDK-EQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 642 ~~~~~~-~~~~~-~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+|+... ..++. ++...+..++.+|++.+|++||+|.||+++|+..
T Consensus 306 iD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 306 VDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred eCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 999976 55664 6888899999999999999999999999999654
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-47 Score=404.25 Aligned_cols=256 Identities=34% Similarity=0.529 Sum_probs=212.8
Q ss_pred cccCcccCCCCccEEEeeccCCcEEEEEEccccCccc--HHHHHHHHHHHHhCCCCceeeEeeEEEeCC-eEEEEEEecC
Q 004400 419 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQG--NREFINEIGMISALQHPNLVKLYGCCIEGN-QLLLIYEYLE 495 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~~~ 495 (756)
...+.||+|+||+||+|.+.....||||++....... .+.|.+|+.+|++++|||||+++|+|.++. ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3445699999999999999866669999997653322 458999999999999999999999999988 7999999999
Q ss_pred CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccCCccccCcccCcce
Q 004400 496 NNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 496 ~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGla~~~~~~~~~~ 573 (756)
+|+|.++++. ....+++..+.+++.|||+||+|||+++ +||||||||+|||++.++ ++||+|||+++...... ..
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~--~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~ 200 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG--PIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TS 200 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC--CeeecccChhhEEEcCCCCEEEECCCccceeecccc-cc
Confidence 9999999987 4778999999999999999999999985 299999999999999998 99999999998655432 22
Q ss_pred eeccccCccCCchHhhh--cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 574 STRVAGTIGYMAPEYAM--RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
.+...||+.|||||++. ...|+.|+|||||||++|||+||+.||.......... .....+.+..+...
T Consensus 201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~---~v~~~~~Rp~~p~~------- 270 (362)
T KOG0192|consen 201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVAS---AVVVGGLRPPIPKE------- 270 (362)
T ss_pred ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHH---HHHhcCCCCCCCcc-------
Confidence 33368999999999999 6689999999999999999999999997765522222 22223333332222
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 689 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 689 (756)
....+..++.+||+.||++||++.+++..|+.+...
T Consensus 271 --~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 271 --CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred --CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 233488899999999999999999999999976553
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-47 Score=382.13 Aligned_cols=247 Identities=29% Similarity=0.479 Sum_probs=207.2
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-eEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN-QLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~ 493 (756)
+.+..+.||+|..|+||++++ .+++.+|+|.+... .....+++.+|++++++.+||+||.+||+|..+. .++++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 455678999999999999995 47889999999544 3344578999999999999999999999999998 59999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
|++|+|++.+... .++++....+|+.+|++||.|||+.. +||||||||+|||++..|.|||||||.++...+. .
T Consensus 160 MDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~ 233 (364)
T KOG0581|consen 160 MDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---I 233 (364)
T ss_pred cCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh---h
Confidence 9999999998755 47999999999999999999999632 5999999999999999999999999999876554 4
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCcc-----chhhHHHHHHHHHhcCccccccccCCCC
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKE-----DMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
..+++||..|||||.+++..|+.++||||||+.++|+.+|+.|+... +.+.++.+ +++..+ .
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~------------Iv~~pp-P 300 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCA------------IVDEPP-P 300 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHH------------HhcCCC-C
Confidence 45688999999999999999999999999999999999999999664 23333322 111111 1
Q ss_pred CCCH-HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 649 NFDK-EQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 649 ~~~~-~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+. ....++..++..|+++||.+||++.|+++.
T Consensus 301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 301 RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1122 234459999999999999999999998764
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-47 Score=380.40 Aligned_cols=207 Identities=30% Similarity=0.537 Sum_probs=187.0
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
..+|...+.||+|+||+||+|++ .++..||||.+..+ .+...+.+..|+.+|+.++|||||.+++++..++.+|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 45788888999999999999994 56899999999776 4555667889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC------CCEEEccCCcccc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD------LNSKISDFGLAKL 565 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~------~~~kl~DFGla~~ 565 (756)
|||.||+|.++++..+ .+++.+++.++.|+|.||++||+++ ||||||||.|||++.. -.+||+|||+|+.
T Consensus 89 EyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999998665 8999999999999999999999996 9999999999999865 4589999999998
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHH
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLD 627 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 627 (756)
..+. ....+.+|++-|||||+++..+|+.|+|+||+|+++|+|++|+.||...+..++..
T Consensus 165 L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~ 224 (429)
T KOG0595|consen 165 LQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL 224 (429)
T ss_pred CCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH
Confidence 7743 33466899999999999999999999999999999999999999998887776665
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-46 Score=390.38 Aligned_cols=252 Identities=31% Similarity=0.476 Sum_probs=217.4
Q ss_pred ccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 418 FATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+...+.||+|-||.||.|.+.....||+|.++.. ....+.|.+|+++|++|+|++||+++|+|..++.++||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 4456899999999999999998889999999764 344578999999999999999999999999999999999999999
Q ss_pred CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 498 SLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 498 sL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
+|.++|+. .+..+...+.+.++.|||+||+||+++. +|||||.++||||+++..+||+|||+|+...++.......
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 99999986 6678999999999999999999999985 9999999999999999999999999999666655555555
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
..-++.|.|||.+..+.++.|+|||||||+||||+| |+.|+......+.+. ..+.+.++..++.+ +
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~----~le~GyRlp~P~~C---------P 430 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE----LLERGYRLPRPEGC---------P 430 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH----HHhccCcCCCCCCC---------C
Confidence 556789999999999999999999999999999999 889987666544333 23445554444333 3
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 656 MVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
..+.+++..||+.+|++|||+..+...|+..
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 3488999999999999999999998888854
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-46 Score=391.04 Aligned_cols=247 Identities=28% Similarity=0.443 Sum_probs=213.1
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
..|...+.||+|||+.||+++. .+|..||+|++.++ .....+...+|+++.+.++|||||+++++|++.+++|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688899999999999999995 88999999999764 4445677899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
|+|++|+|..++. .++.+++.+++.++.||+.||.|||+.+ |||||||..|++++++.++||+|||+|.....+..
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 9999999999886 5669999999999999999999999996 99999999999999999999999999997764422
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
...+.+|||.|+|||++.+..++..+||||+|||||-|++|++||...+..+..... +..... +|
T Consensus 174 -rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I---k~~~Y~-----------~P 238 (592)
T KOG0575|consen 174 -RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI---KLNEYS-----------MP 238 (592)
T ss_pred -ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH---HhcCcc-----------cc
Confidence 235689999999999999999999999999999999999999999777655444321 111111 11
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
........++|.++++.+|.+|||+++|++
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 122334789999999999999999999985
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-46 Score=371.10 Aligned_cols=244 Identities=27% Similarity=0.401 Sum_probs=205.7
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
..++|+..+.||+|+||+||.++ ..+++.+|+|+++++ .....+...+|..+|.+++||+||+++..|++.+.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 34689999999999999999999 557899999999875 23345678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|+||+.||.|..+|.+.+ .+++..+..++..|+.||.|||+.| |||||+||+|||+|++|+++|+|||+++..-..
T Consensus 103 Vld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 999999999999997554 7999999999999999999999997 999999999999999999999999999854433
Q ss_pred CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
. ..+.+++||+.|||||++.+..|+.++|.||+|+++|||++|.+||...+.....+. +...+ . ..+
T Consensus 179 ~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~---I~~~k-~-----~~~--- 245 (357)
T KOG0598|consen 179 G-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK---ILKGK-L-----PLP--- 245 (357)
T ss_pred C-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH---HhcCc-C-----CCC---
Confidence 2 234558999999999999999999999999999999999999999988875544332 11111 0 011
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCC
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPS 675 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt 675 (756)
+.-.....++++.+.+..||++|--
T Consensus 246 -p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 246 -PGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred -CccCCHHHHHHHHHHhccCHHHhcC
Confidence 1112234788999999999999963
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-46 Score=374.03 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=206.6
Q ss_pred HhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcc-------cHHHHHHHHHHHHhCCCCceeeEeeEEEeC
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ-------GNREFINEIGMISALQHPNLVKLYGCCIEG 484 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 484 (756)
...+.|...+.||+|+||.|-+|. .++|+.||||++++..-. ......+|+++|++++|||||+++++|..+
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 345677888999999999999998 778999999999764211 123457899999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC---CCEEEccCC
Q 004400 485 NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD---LNSKISDFG 561 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~---~~~kl~DFG 561 (756)
+..|||||||+||+|.+.+..++ .+.+.....++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred CceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999999997654 6888889999999999999999998 9999999999999766 679999999
Q ss_pred ccccCcccCcceeeccccCccCCchHhhhcCC---CCcccchhhHHHHHHHHHhCCCCCCccchhh-HHHHHHHHHhcCc
Q 004400 562 LAKLDEEENTHISTRVAGTIGYMAPEYAMRGH---LTEKADVYSFGIVALEIVSGRSNVTKEDMFY-LLDWALVLKEQGK 637 (756)
Q Consensus 562 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGv~l~elltg~~p~~~~~~~~-~~~~~~~~~~~~~ 637 (756)
+|+..++ .....+.+||+.|.|||++.+.. +..++|+||+||++|-+++|.+||..+.... +.+ .+. .+.
T Consensus 325 lAK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e---QI~-~G~ 398 (475)
T KOG0615|consen 325 LAKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE---QIL-KGR 398 (475)
T ss_pred hhhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHH---HHh-cCc
Confidence 9998763 33456789999999999998754 3348899999999999999999996543221 111 111 111
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 638 LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
.. .......+...+..+++.+++..||++||++.|+++.-
T Consensus 399 y~------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 399 YA------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred cc------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 10 01112334556788999999999999999999998753
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-46 Score=358.64 Aligned_cols=253 Identities=26% Similarity=0.451 Sum_probs=210.2
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEee-EEEeCCe-EEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYG-CCIEGNQ-LLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lV 490 (756)
.+|.+.++||+|.||+||++. ..+|..||.|.+.-. .....+....|+.+|++++|||||++++ .|.++.+ +++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 367788999999999999998 789999999988643 3344567899999999999999999999 5666666 8999
Q ss_pred EEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 491 YEYLENNSLARALF---EHRLKLDWPTRRRICLGIARGLAYLHGESRIK--VVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 491 ~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~--iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
||||..|+|...+. +.++.+++.++++++.|++.||.++|+.- ++ |+||||||.||+++.+|.|||+|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999999999986 45668999999999999999999999842 23 89999999999999999999999999998
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
+....+ .....+|||.||+||.+....|+.|+||||+||++|||+.-+.||.+.+...+.... ..++.
T Consensus 178 l~s~~t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI----~qgd~------- 245 (375)
T KOG0591|consen 178 LSSKTT-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI----EQGDY------- 245 (375)
T ss_pred hcchhH-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH----HcCCC-------
Confidence 776443 345678999999999999999999999999999999999999999988655544311 11211
Q ss_pred CCCCCC-HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 646 PGSNFD-KEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 646 ~~~~~~-~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
...+ .-.+..+..++..|+..||+.||+...+++.+
T Consensus 246 --~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 246 --PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred --CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 1122 33456689999999999999999855554443
No 11
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-43 Score=368.68 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=213.8
Q ss_pred HhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeE
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 487 (756)
...++|...+.||+|+|++||+|+ ..+++.||||++.+. .....+.+.+|-.+|.+| .||.||+++..|+++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 345789999999999999999999 668999999999764 222335567899999999 899999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
|+|+||+++|+|.++|... ..+++...+.++.+|+.||+|||++| ||||||||+|||+|+||++||+|||-|+.+.
T Consensus 150 YFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 9999999999999999766 48999999999999999999999997 9999999999999999999999999999775
Q ss_pred ccCcc----------ee--eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc
Q 004400 568 EENTH----------IS--TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ 635 (756)
Q Consensus 568 ~~~~~----------~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 635 (756)
+.... .+ ..++||..|.+||++..+..+..+|+|+||||+|+|+.|++||.+.+++.++..+. .-
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~--~l- 302 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ--AL- 302 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH--Hh-
Confidence 43211 12 45899999999999999999999999999999999999999999888766654321 11
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 636 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+-.....++ ..+.+|+.+.+..||.+|++..||-+.
T Consensus 303 -------~y~fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 303 -------DYEFPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -------cccCCCCCC----HHHHHHHHHHHccCccccccHHHHhhC
Confidence 111122333 348899999999999999999888654
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.7e-44 Score=345.05 Aligned_cols=261 Identities=21% Similarity=0.312 Sum_probs=206.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
+.|+....+|+|+||.||+++. .+|+.||||++.... +...+-.++|+++|++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 3577788999999999999995 569999999986542 2334567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
||+..-|.+ |......++.....+++.|+++|+.|+|++. +|||||||+|||++.++.+||||||+|+..... ..
T Consensus 82 ~~dhTvL~e-Le~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-gd 156 (396)
T KOG0593|consen 82 YCDHTVLHE-LERYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP-GD 156 (396)
T ss_pred ecchHHHHH-HHhccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC-cc
Confidence 999865554 4455567899999999999999999999985 999999999999999999999999999987642 22
Q ss_pred eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHH------------HHhcCccc
Q 004400 573 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALV------------LKEQGKLM 639 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~------------~~~~~~~~ 639 (756)
..+..+.|.+|.|||.+.+ .+|+..+||||+||++.||++|.+-|.+....+.+-.... +....-..
T Consensus 157 ~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~ 236 (396)
T KOG0593|consen 157 NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFH 236 (396)
T ss_pred hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence 3355678999999999988 7899999999999999999999999977765543321111 11111111
Q ss_pred ccc-----ccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 640 ELV-----DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 640 ~~~-----~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.+. +..+.+...+....-++++++.|++.||.+|++-+|++.
T Consensus 237 Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 237 GVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111 111111112233446889999999999999999999863
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-43 Score=359.02 Aligned_cols=264 Identities=26% Similarity=0.392 Sum_probs=215.7
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 489 (756)
.+.|+.+++||+|.||.||+|+ ..+|+.||+|++.... ........+|+.+|++++||||+++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 4567788999999999999999 7789999999987653 33445678999999999999999999998876 78999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|+|||+. +|.-++.....+++..++..++.|++.||+|+|++| |+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999987 888888887889999999999999999999999997 999999999999999999999999999988776
Q ss_pred CcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccc-----cccc
Q 004400 570 NTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM-----ELVD 643 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 643 (756)
.....+..+-|.+|.|||.+.+ ..|+.++|+||.|||+.||++|+..|.+.++...+..+..+....... .+..
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence 6555566677999999999987 469999999999999999999999998887766555444333221110 1110
Q ss_pred ---cCCCCCCCH-------HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 644 ---TNPGSNFDK-------EQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 644 ---~~~~~~~~~-------~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+...+.. ......++|+..++..||.+|.|+.++++.
T Consensus 352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 011111111 112257788999999999999999998753
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6e-43 Score=357.50 Aligned_cols=255 Identities=30% Similarity=0.460 Sum_probs=205.3
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC--eEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN--QLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~e 492 (756)
.+|...+.||+|+||+||.+... +|...|||.+........+.+.+|+.+|++++|||||+++|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35667789999999999999954 59999999987653333567899999999999999999999855444 6999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-CCCEEEccCCccccCcc--c
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFGLAKLDEE--E 569 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-~~~~kl~DFGla~~~~~--~ 569 (756)
|+++|+|.+++...+..+++..+.+++.||++||+|||++| ||||||||+|||++. ++.+||+|||+++.... .
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 99999999999876658999999999999999999999997 999999999999999 79999999999987663 2
Q ss_pred CcceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.......+.||+.|||||++..+ ....++||||+||++.||+||+.||... .....+...........
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~~P--------- 242 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGREDSLP--------- 242 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccCCCC---------
Confidence 22223457899999999999864 3445999999999999999999999653 12222222222222222
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.++...+....+++.+|+..+|++|||++++++..-
T Consensus 243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 243 EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 222223445889999999999999999999987643
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-43 Score=367.96 Aligned_cols=251 Identities=27% Similarity=0.480 Sum_probs=213.6
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
...|..-..||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||++++.|..++++|.||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 3467778899999999999998 678899999999876555566789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
|+||+|.|.+... .+++.++..|+.++++||+|||.+| |+|||||.+|||++.+|.+||+|||++..+..... .
T Consensus 352 m~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-K 425 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-K 425 (550)
T ss_pred cCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC-c
Confidence 9999999998544 5999999999999999999999997 99999999999999999999999999987665544 3
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
..+.+||+.|||||+.....|++|+||||||++++||+.|.+||..++...... .+...+ .+....+..
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly---LIa~ng--------~P~lk~~~k 494 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNG--------TPKLKNPEK 494 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH---HHhhcC--------CCCcCCccc
Confidence 456789999999999999999999999999999999999999997765533211 111111 111222334
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.+++.+|++.||++||++.|+++.
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 45569999999999999999999999864
No 16
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-43 Score=385.95 Aligned_cols=258 Identities=30% Similarity=0.506 Sum_probs=216.5
Q ss_pred hcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 487 (756)
..+....+.||+|+||+||+|+.. +...||||.++.+... ..++|++|++.++.++|||||+++|+|.+++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 355667789999999999999842 3567999999887555 678999999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhc---------CC----CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC
Q 004400 488 LLIYEYLENNSLARALFEH---------RL----KLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 554 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~---------~~----~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~ 554 (756)
++|+|||..|+|.++|..+ +. .++..+.+.||.|||.||+||-++. +|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceE
Confidence 9999999999999999732 12 2888999999999999999999885 999999999999999999
Q ss_pred EEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHH
Q 004400 555 SKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVL 632 (756)
Q Consensus 555 ~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 632 (756)
|||+|||++|..-..+.+. .....-+++|||||.++.++|++++|||||||+|||+++ |+.|+.+....+..+ .
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe----~ 717 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE----C 717 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH----H
Confidence 9999999999654444433 224456789999999999999999999999999999998 999997665433322 3
Q ss_pred HhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 633 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
.+++.+.+..+.+| .++.+|+..||+.+|.+||+++||-..|+.+..
T Consensus 718 i~~g~lL~~Pe~CP---------~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 718 IRAGQLLSCPENCP---------TEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHcCCcccCCCCCC---------HHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 34555544443333 359999999999999999999999999997754
No 17
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.8e-42 Score=328.17 Aligned_cols=262 Identities=23% Similarity=0.343 Sum_probs=213.4
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcc--cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ--GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.+|...+.+|+|.||.||+|+ ..+|+.||||+++..... -.....+|+..|+.++|+||+.++++|-..+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 357778899999999999999 678999999999765322 24568999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
||+. +|+..++.....++..++..++.++++|++|||++. |+||||||.|+|++++|.+||+|||+|+.+......
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9976 899999988889999999999999999999999996 999999999999999999999999999988765544
Q ss_pred eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccc------c--
Q 004400 573 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV------D-- 643 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 643 (756)
... .+-|.+|.|||.+.+ +.|+..+||||.|||+.||+-|.+-|.+++..+.+.............+.. |
T Consensus 158 ~~~-~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~ 236 (318)
T KOG0659|consen 158 QTH-QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYV 236 (318)
T ss_pred ccc-ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHH
Confidence 333 256899999999987 569999999999999999999887777777665554433333222111111 1
Q ss_pred ------cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 644 ------TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 644 ------~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+....-........+++..++..||.+|.+++|++++
T Consensus 237 ~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 237 KIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111111222233456899999999999999999998764
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-42 Score=330.09 Aligned_cols=238 Identities=26% Similarity=0.381 Sum_probs=203.0
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
..++|+..+.||.|+||+|..++ ..+|..+|+|.+.+.. -...+...+|..+|+.+.||+++++++.|.+.+..||
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 34688999999999999999999 4568899999997652 2234557789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||++||.|..++++.+ ++++..++.++.||+.||+|||+.+ |++||+||+|||+|.+|.+||+|||+|+.....
T Consensus 122 vmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 999999999999997654 8999999999999999999999996 999999999999999999999999999875543
Q ss_pred CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
.-+.+||+.|+|||+++...|..++|.|||||++|||+.|..||...+...+.+ ++...+- .
T Consensus 198 ----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~--KI~~~~v------------~ 259 (355)
T KOG0616|consen 198 ----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYE--KILEGKV------------K 259 (355)
T ss_pred ----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHH--HHHhCcc------------c
Confidence 345899999999999999999999999999999999999999998877654432 1121111 1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCC
Q 004400 650 FDKEQVMVMINVALLCANASPTIR 673 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~R 673 (756)
++.-....+.+++...++.|-.+|
T Consensus 260 fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 260 FPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CCcccCHHHHHHHHHHHhhhhHhh
Confidence 222223348889999999999988
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=355.64 Aligned_cols=261 Identities=22% Similarity=0.315 Sum_probs=211.1
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccH-HHHHHHHHHHHhCC-CCceeeEeeEEEeCC-eEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGN-REFINEIGMISALQ-HPNLVKLYGCCIEGN-QLLLI 490 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lV 490 (756)
.++|...+.||.|.||.||+|+ ..+|..||||+++++..... -.=.||+..|++++ |||||++.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4577888999999999999999 67899999999987644322 23478999999998 999999999999988 99999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
||||+. +|.+.+..+++.+++.+++.|+.||++||+|+|.+| +.|||+||+|||+.....+||+|||+||-.....
T Consensus 89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp 164 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRSKP 164 (538)
T ss_pred HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccccCC
Confidence 999976 899999988889999999999999999999999998 9999999999999988899999999999655433
Q ss_pred cceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccc---------
Q 004400 571 THISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME--------- 640 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 640 (756)
. .+..+.|.+|.|||++.+ +.|+.+.|+||+|||++|+.+-++-|.+.++.+..-..-.+.......+
T Consensus 165 P--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 165 P--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred C--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence 3 355778999999999865 6799999999999999999999999988776554322211111111111
Q ss_pred --------ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 641 --------LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 641 --------~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+...... ..-+....+.++++.+|+..||.+|||+.|.++.
T Consensus 243 ~mnf~~P~~~~~~l~-~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLK-DLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HhccCCCcCCCCChH-HhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1000110 1111245568899999999999999999999876
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=343.57 Aligned_cols=260 Identities=25% Similarity=0.385 Sum_probs=206.6
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.++|+....||.|..++||+|+ .+.+..||||++.... ......+.+|++.|+.++||||++++..|..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3578889999999999999999 6778999999997643 2335788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 493 YLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 493 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||.+|++.+.+... ...+++..+..|.+++++||.|||.+| .||||||+.|||++++|.|||+|||.+........
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999743 346899999999999999999999998 99999999999999999999999999865433222
Q ss_pred c---eeeccccCccCCchHhhhc--CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 572 H---ISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 572 ~---~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
. ....+.||++|||||+++. ..|+.|+||||||+...|+.+|..||..-.....+- +.-.+......-...
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl----~tLqn~pp~~~t~~~ 257 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL----LTLQNDPPTLLTSGL 257 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH----HHhcCCCCCcccccC
Confidence 1 1255789999999999654 469999999999999999999999995444332211 111122111110000
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
...-.......+.+++..|++.||++|||++++++
T Consensus 258 ~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 258 DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00001112336889999999999999999999964
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=358.12 Aligned_cols=249 Identities=23% Similarity=0.389 Sum_probs=208.0
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc----Cc-ccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK----SK-QGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 486 (756)
..+.|...+.||+|+||+||.|. ..++..||+|++.+. .. ...+.+.+|+.+++.++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45688999999999999999998 567899999977653 11 23456678999999999 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC-CCEEEccCCcccc
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFGLAKL 565 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~-~~~kl~DFGla~~ 565 (756)
.++||||+.||+|.+++.+ ..++.+..+.++++|++.|++|||++| |+||||||+|||+|.+ +.+||+|||++..
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999988 668999999999999999999999997 9999999999999999 9999999999997
Q ss_pred CcccCcceeeccccCccCCchHhhhcCC-CC-cccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccc
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGH-LT-EKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 643 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (756)
.. .......+.+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||...+...+... .....-.+...
T Consensus 171 ~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k--i~~~~~~~p~~-- 245 (370)
T KOG0583|consen 171 SP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK--IRKGEFKIPSY-- 245 (370)
T ss_pred cC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH--HhcCCccCCCC--
Confidence 74 2223345689999999999999877 75 789999999999999999999977654433321 11111111111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004400 644 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVL 680 (756)
Q Consensus 644 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~ 680 (756)
.. ...+..++.+|+..+|.+|+++.+|+
T Consensus 246 ------~~---S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 246 ------LL---SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ------cC---CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 10 34488999999999999999999998
No 22
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.5e-41 Score=351.70 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=207.2
Q ss_pred hHHHhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN 485 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 485 (756)
+.+...++|+....||+|+||.||.|+ ..+|..+|+|++++. .....+.+..|-.+|...++|.||++|..|++.+
T Consensus 135 R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~ 214 (550)
T KOG0605|consen 135 RTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE 214 (550)
T ss_pred cccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC
Confidence 345567899999999999999999999 567999999999875 3445567888999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
++||||||++||++..+|...+ .|++..+..++.+++.|++.+|+.| +|||||||+|+|||..|++||+|||++.-
T Consensus 215 ~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 215 YLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred eeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccch
Confidence 9999999999999999997654 8999999999999999999999997 99999999999999999999999999852
Q ss_pred Ccc-----------------------cCc----ce-------------------eeccccCccCCchHhhhcCCCCcccc
Q 004400 566 DEE-----------------------ENT----HI-------------------STRVAGTIGYMAPEYAMRGHLTEKAD 599 (756)
Q Consensus 566 ~~~-----------------------~~~----~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 599 (756)
... +.. .. ...++|||.|||||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 211 000 00 01257999999999999999999999
Q ss_pred hhhHHHHHHHHHhCCCCCCccchhhHH----HHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC
Q 004400 600 VYSFGIVALEIVSGRSNVTKEDMFYLL----DWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPS 675 (756)
Q Consensus 600 v~slGv~l~elltg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt 675 (756)
.||+|||+|||+.|-+||.+++..... .|..... .++ ..... .+..++|.+|+. ||++|--
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~-------fP~---~~~~s----~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK-------FPE---EVDLS----DEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc-------CCC---cCccc----HHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999999888765433 2321111 111 11111 347889999999 9999985
Q ss_pred ---HHHHH
Q 004400 676 ---MSSVL 680 (756)
Q Consensus 676 ---~~ev~ 680 (756)
+.||-
T Consensus 436 ~~G~~EIK 443 (550)
T KOG0605|consen 436 SKGAEEIK 443 (550)
T ss_pred cccHHHHh
Confidence 55553
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.9e-41 Score=362.41 Aligned_cols=258 Identities=26% Similarity=0.421 Sum_probs=203.2
Q ss_pred hhcCccccCcccCCCCccEEEeec------cCCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC-
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEG- 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 484 (756)
..++|...+.||+|+||.||+|.. .+++.||||.+.... ......+.+|+.+++++ +|||||+++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 346788999999999999999973 235689999987542 23346789999999999 899999999998764
Q ss_pred CeEEEEEEecCCCCHHHHHHhcC---------------------------------------------------------
Q 004400 485 NQLLLIYEYLENNSLARALFEHR--------------------------------------------------------- 507 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~--------------------------------------------------------- 507 (756)
+..++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 46899999999999999987431
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc-eeeccccCcc
Q 004400 508 ----LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH-ISTRVAGTIG 582 (756)
Q Consensus 508 ----~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~ 582 (756)
..+++.++..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++........ ......+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 24788899999999999999999986 999999999999999999999999999865332221 1223456788
Q ss_pred CCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHH
Q 004400 583 YMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINV 661 (756)
Q Consensus 583 y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 661 (756)
|+|||++.+..++.++|||||||++|||++ |+.||......... .... ..+.... .... ....+.++
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~--~~~~-~~~~~~~-----~~~~----~~~~l~~l 309 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEF--CQRL-KDGTRMR-----APEN----ATPEIYRI 309 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHH--HHHH-hcCCCCC-----CCCC----CCHHHHHH
Confidence 999999999899999999999999999997 99999654322111 1111 1111111 1111 22348899
Q ss_pred HHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 662 ALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 662 ~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+.+||+.||++||++.|+++.|+.+
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999999864
No 24
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=363.39 Aligned_cols=261 Identities=31% Similarity=0.475 Sum_probs=214.1
Q ss_pred hhcCccccCcccCCCCccEEEeeccC--C--cE-EEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLAD--G--TA-IAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN 485 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~--~~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 485 (756)
..++....+.||+|+||.||+|++.. + .. ||||..+.. ......+|++|+++|++++|||||++||++..+.
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34555666999999999999999543 2 23 899998853 4566788999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
.+++|||+|.||+|.++|......++..++.+++.+.|.||+|||++. +|||||.++|+|++.++.+||+|||+++.
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999999987778999999999999999999999995 99999999999999999999999999986
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcccccccc
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (756)
........ ....-+..|+|||.+..+.|+.++|||||||++||+++ |..||.+........++ ...+..+....
T Consensus 312 ~~~~~~~~-~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI---~~~~~r~~~~~- 386 (474)
T KOG0194|consen 312 GSQYVMKK-FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKI---VKNGYRMPIPS- 386 (474)
T ss_pred Ccceeecc-ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHH---HhcCccCCCCC-
Confidence 44211111 11124679999999999999999999999999999999 88899887766544432 12222222222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 690 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 690 (756)
..+..+..++..||..+|++||+|.++.+.++.+....
T Consensus 387 --------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 387 --------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred --------CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 23345778888999999999999999999999765543
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.9e-41 Score=351.47 Aligned_cols=246 Identities=27% Similarity=0.413 Sum_probs=211.3
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
++|...+.||+|.||+||||+. .+.+.||+|.+.+. .+...+.+.+|+++++.++|||||.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4667778999999999999994 56889999999764 23345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+.| +|..+|... ..++++.+..++.++..||.|||+.+ |+|||+||.|||++..+.+|+||||+|+.... ++.
T Consensus 82 ~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~ 155 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTS 155 (808)
T ss_pred hhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhccc-Cce
Confidence 9988 999999654 58999999999999999999999986 99999999999999999999999999997665 455
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
..+.+.||+-|||||...++.|+..+|.||+||++||+.+|++||.......++... ..+ + ..++.
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I---~~d----------~-v~~p~ 221 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI---LKD----------P-VKPPS 221 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH---hcC----------C-CCCcc
Confidence 567788999999999999999999999999999999999999999877655544321 111 1 12233
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.....++.++...+.+||.+|-+..+++.
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 45566999999999999999999999864
No 26
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-42 Score=359.42 Aligned_cols=259 Identities=28% Similarity=0.464 Sum_probs=208.3
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.+.+.....||+|.||+||+|+|. ..||||.+... .....+.|+.|+.++++-+|.||+-+.|||..+.. .+|+.
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq 467 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ 467 (678)
T ss_pred HHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence 345667889999999999999975 35999999765 34456789999999999999999999999999888 99999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC-c
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN-T 571 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~-~ 571 (756)
||+|-+|..+++..+.+++..+.+.|++|||+|+.|||.++ |||||||..||++.+++.|||+|||++....... .
T Consensus 468 wCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~ 544 (678)
T KOG0193|consen 468 WCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE 544 (678)
T ss_pred hccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeeeccc
Confidence 99999999999988889999999999999999999999996 9999999999999999999999999997432211 1
Q ss_pred ceeeccccCccCCchHhhhc---CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.....--|...|||||+++. ..|+..+||||||+++|||+||..||.......+ ..+...+..+.-..
T Consensus 545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI----ifmVGrG~l~pd~s----- 615 (678)
T KOG0193|consen 545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI----IFMVGRGYLMPDLS----- 615 (678)
T ss_pred cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe----EEEecccccCccch-----
Confidence 11122347789999999975 4689999999999999999999999974332211 11222222211110
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
.........+.+|+..||..++++||.+.+|+..|+....
T Consensus 616 ~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 616 KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1122334468899999999999999999999998886644
No 27
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-41 Score=342.53 Aligned_cols=254 Identities=25% Similarity=0.335 Sum_probs=205.3
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc--------------ccHHHHHHHHHHHHhCCCCceeeEe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK--------------QGNREFINEIGMISALQHPNLVKLY 478 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~ 478 (756)
..++|++.+.||+|.||.|-+|+ ..+++.||||++.+... ...+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 45789999999999999999999 56899999999976411 1125788999999999999999999
Q ss_pred eEEEeC--CeEEEEEEecCCCCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCE
Q 004400 479 GCCIEG--NQLLLIYEYLENNSLARALFEHRLK-LDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNS 555 (756)
Q Consensus 479 ~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~ 555 (756)
.+..+. +.+|||+|||..|.+... ..... +++.++++|+.++..||+|||.+| ||||||||+|+|++++|+|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~--p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC--PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC--CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcE
Confidence 998864 689999999999977432 22334 899999999999999999999997 9999999999999999999
Q ss_pred EEccCCccccCccc----CcceeeccccCccCCchHhhhcCC----CCcccchhhHHHHHHHHHhCCCCCCccchhhHHH
Q 004400 556 KISDFGLAKLDEEE----NTHISTRVAGTIGYMAPEYAMRGH----LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLD 627 (756)
Q Consensus 556 kl~DFGla~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 627 (756)
||+|||.+...... ........+||+.|+|||.+.++. .+.+.||||+||+||.|+.|+.||.++..+.+.+
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~ 329 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD 329 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence 99999999865322 111123468999999999998732 4678999999999999999999998877666554
Q ss_pred HHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 628 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.. +...+.....++....+.+++++++++||++|.+..+|.....
T Consensus 330 KI------------vn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 330 KI------------VNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HH------------hcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 21 2222222222344556899999999999999999999976654
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=346.20 Aligned_cols=246 Identities=20% Similarity=0.301 Sum_probs=200.3
Q ss_pred cCcccCCCCccEEEeeccCCcEEEEEEccccCccc---HHHHHHHHHHHHhCCCCceeeEeeEEEe----CCeEEEEEEe
Q 004400 421 DNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQG---NREFINEIGMISALQHPNLVKLYGCCIE----GNQLLLIYEY 493 (756)
Q Consensus 421 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~ 493 (756)
...||+|++|.||+|.+ +|+.||||.++...... .+.|.+|+.++++++|||||++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36899999999999998 68899999997643332 4667899999999999999999999977 3578999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++|+|.+++... ..+++..+.+++.|++.||+|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 104 CTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred CCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 9999999999754 47899999999999999999999742 37899999999999999999999999998644321
Q ss_pred eeccccCccCCchHhhhc--CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 574 STRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...+....... ......... .+
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~---i~~~~~~~~---------~~ 244 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDL---IINKNNSLK---------LP 244 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHH---HHhcCCCCC---------CC
Confidence 23458899999999976 6799999999999999999999999976554333221 111111111 11
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
......+.+++.+||+.||++|||+.|+++.|+..
T Consensus 245 ~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 245 LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 12234588999999999999999999999999864
No 29
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-41 Score=380.58 Aligned_cols=259 Identities=31% Similarity=0.483 Sum_probs=213.8
Q ss_pred hcCccccCcccCCCCccEEEeeccC--Cc----EEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLAD--GT----AIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 487 (756)
....+..+.||+|+||.||+|...+ |. .||||.+++. +.....+|.+|..+|++++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3455677899999999999999543 43 4999999775 445567899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCC
Q 004400 488 LLIYEYLENNSLARALFEH------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFG 561 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFG 561 (756)
++++|||++|+|..+|++. ...++..+.+.++.|||+|+.|||+++ +|||||..+|+||++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999999976 567999999999999999999999985 9999999999999999999999999
Q ss_pred ccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccc
Q 004400 562 LAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLM 639 (756)
Q Consensus 562 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (756)
+|+........ ......-+..|||||.++.+.++.|+|||||||++||++| |..||...+..+.... ..+.+ +.
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~---~~~gg-RL 923 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD---VLEGG-RL 923 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH---HHhCC-cc
Confidence 99944333322 2222234579999999999999999999999999999999 8899977666554431 11223 22
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004400 640 ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 689 (756)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 689 (756)
+.+ ..++..+.+++..||+.+|++||++..|++.++++...
T Consensus 924 ~~P---------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 924 DPP---------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCC---------CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 221 12333488999999999999999999999988876553
No 30
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.6e-40 Score=346.93 Aligned_cols=260 Identities=27% Similarity=0.425 Sum_probs=203.6
Q ss_pred cCccccCcccCCCCccEEEeeccC-----------------CcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLAD-----------------GTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKL 477 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 477 (756)
++|...+.||+|+||.||+|.+.+ +..||+|.+.... .....+|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 577888999999999999997532 3469999987542 3344679999999999999999999
Q ss_pred eeEEEeCCeEEEEEEecCCCCHHHHHHhcC------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEc
Q 004400 478 YGCCIEGNQLLLIYEYLENNSLARALFEHR------------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVH 539 (756)
Q Consensus 478 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH 539 (756)
++++.+.+..++||||+++|+|.+++.... ..+++..+.+++.||+.||+|||+.| |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 999999999999999999999999986421 24688899999999999999999986 999
Q ss_pred CCCCCCceEecCCCCEEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh--CCCC
Q 004400 540 RDIKATNVLLDKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS--GRSN 616 (756)
Q Consensus 540 ~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt--g~~p 616 (756)
|||||+||+++.++.+||+|||+++....... .......++..|+|||++..+.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986543322 12233456789999999998899999999999999999987 5667
Q ss_pred CCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 617 VTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
|..........+................ ... .+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDEQVIENAGEFFRDQGRQVYLFR--PPP----CPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHHHHHHHHHHHhhhccccccccC--CCC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7554433333332222111111111110 111 2234889999999999999999999999886
No 31
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.4e-40 Score=342.51 Aligned_cols=256 Identities=25% Similarity=0.393 Sum_probs=207.1
Q ss_pred hcCccccCcccCCCCccEEEeecc----CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
.++|+..+.||+|+||.||+|.+. .+..||+|.++... ......|.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888899999999999999743 35689999987643 2334578999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||+++|+|.+++......+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+|++|||.+......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 99999999999999876668999999999999999999999986 999999999999999999999999987654322
Q ss_pred CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.........++..|+|||.+.+..++.++|||||||++||+++ |+.||........... . ..+.... .
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~---~-~~~~~~~-----~-- 229 (266)
T cd05064 161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA---V-EDGFRLP-----A-- 229 (266)
T ss_pred chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH---H-HCCCCCC-----C--
Confidence 2221222345678999999999999999999999999999775 9999976554333221 1 1111111 1
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+...+..+.+++.+||+.+|++||++.+|++.|+..
T Consensus 230 --~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 230 --PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 112233488999999999999999999999998753
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=344.97 Aligned_cols=248 Identities=29% Similarity=0.456 Sum_probs=208.7
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
..|...+.||+|.||.||+|. ...++.||+|++... .....+++.+|+.++..++++||.++|+.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 456777899999999999999 567899999999765 344567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
|.||++.+.+... ..+++..+.-+++++..|+.|||.++ .+|||||+.||++..+|.+|++|||.+..........
T Consensus 93 ~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred hcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 9999999998644 35588888999999999999999996 9999999999999999999999999997655443333
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.+++||+.|||||++....|+.|+||||||++.+||++|.+|+.....+ ...-.+.+.........
T Consensus 169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-------------rvlflIpk~~PP~L~~~ 234 (467)
T KOG0201|consen 169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-------------RVLFLIPKSAPPRLDGD 234 (467)
T ss_pred -ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-------------eEEEeccCCCCCccccc
Confidence 5689999999999999889999999999999999999999999544331 12222333332333334
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....+.+++..|++.+|+.||++.++++
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 4455999999999999999999999964
No 33
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8.2e-40 Score=337.63 Aligned_cols=252 Identities=26% Similarity=0.474 Sum_probs=207.0
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
++|+..+.||+|+||.||+|.+.++..+|+|.+... ......+.+|++++++++||||++++++|.+++..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457788899999999999999888889999988643 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++...........
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 99999999765557899999999999999999999986 999999999999999999999999999865433222222
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
...++..|+|||.+....++.++||||||+++|||++ |+.||...+........ .. ..... . +...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i---~~-~~~~~--~-------~~~~ 226 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI---SR-GFRLY--R-------PKLA 226 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HC-CCCCC--C-------CCCC
Confidence 3345678999999988889999999999999999999 89999766544433322 11 11110 0 1111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
...+.+++.+||+.+|++||++.++++.|.
T Consensus 227 ~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 227 SMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 235889999999999999999999998863
No 34
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-41 Score=348.28 Aligned_cols=241 Identities=28% Similarity=0.422 Sum_probs=198.8
Q ss_pred cccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCC
Q 004400 419 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNS 498 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 498 (756)
...+-||.|+.|.||.|++. ++.||||+++.-. ..++.-|++|+||||+.+.|+|.....+|+|||||..|-
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 45678999999999999986 5789999885321 347888999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccc
Q 004400 499 LARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVA 578 (756)
Q Consensus 499 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 578 (756)
|..+|+.. ..+.......+..+||.|+.|||.+ +|||||||.-||||..+..|||+|||-++...+. .....++
T Consensus 199 L~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFa 272 (904)
T KOG4721|consen 199 LYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFA 272 (904)
T ss_pred HHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhh
Confidence 99999654 4788888999999999999999988 4999999999999999999999999999866554 2235689
Q ss_pred cCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHH
Q 004400 579 GTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVM 658 (756)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 658 (756)
||..|||||++.+...++|+|||||||+||||+||..||...+..-+ +..-+ ...+.-..+..++.-+
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI------IwGVG------sNsL~LpvPstcP~Gf 340 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI------IWGVG------SNSLHLPVPSTCPDGF 340 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee------EEecc------CCcccccCcccCchHH
Confidence 99999999999999999999999999999999999999954332111 00000 0111112223334447
Q ss_pred HHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 659 INVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 659 ~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
.-|++.||+..|..||+|++++..|+-
T Consensus 341 klL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 341 KLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 888999999999999999999999883
No 35
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=353.65 Aligned_cols=245 Identities=24% Similarity=0.381 Sum_probs=208.2
Q ss_pred HHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCe
Q 004400 412 KAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 412 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 486 (756)
+...++|...++||+|.||+|+.|.. .+++.+|||.+++. ..+..+..+.|.+++... +||++++++.+|+..++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 34567899999999999999999994 56889999999876 345567788899988877 59999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
+|+||||+.||++..+ .+...+++..+..++..|+.||.|||++| |||||||.+|||+|.+|.+||+|||+++..
T Consensus 444 l~fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc
Confidence 9999999999994333 44568999999999999999999999997 999999999999999999999999999853
Q ss_pred cccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
-.. ...+++++||+.|||||++....|+.++|.|||||+||||+.|..||.++++.++.+... .|.
T Consensus 519 m~~-g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~-----------~d~-- 584 (694)
T KOG0694|consen 519 MGQ-GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV-----------NDE-- 584 (694)
T ss_pred CCC-CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh-----------cCC--
Confidence 322 224567999999999999999999999999999999999999999999888777665321 111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 676 (756)
..|+.-.+.+.+.++++.+..+|++|--+
T Consensus 585 -~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 -VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 12344445568899999999999999976
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.5e-39 Score=341.13 Aligned_cols=249 Identities=24% Similarity=0.316 Sum_probs=199.7
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
|...+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|+.++++++|+||+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66778999999999999984 679999999986532 22334678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET- 157 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe-
Confidence 9999999888643 346899999999999999999999986 99999999999999999999999999986533221
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....||..|+|||++.+..++.++|||||||++|||++|+.||................... ...++.
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~~~~ 226 (285)
T cd05631 158 -VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED----------QEEYSE 226 (285)
T ss_pred -ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc----------cccCCc
Confidence 234578999999999999999999999999999999999999996543321111110000000 011112
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 004400 653 EQVMVMINVALLCANASPTIRPS-----MSSVLR 681 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt-----~~ev~~ 681 (756)
.....+.+++.+||+.||++||+ ++++++
T Consensus 227 ~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 22335889999999999999997 677765
No 37
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=345.40 Aligned_cols=257 Identities=27% Similarity=0.453 Sum_probs=216.4
Q ss_pred hcCccccCcccCCCCccEEEeeccC---C--cEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLAD---G--TAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
.+.....++||+|-||.||+|++.+ | -.||||..+.+ .....+.|.+|..+|++++|||||+++|+|.+ ...|
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 3445567899999999999998532 3 36889998874 44556789999999999999999999999976 5789
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+|||.++-|.|..+|......++..+...++.||+.||+|||+. ++|||||..+|||+.....||++|||++|....
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999999999998888999999999999999999999988 499999999999999999999999999999988
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
+.....+...-++.|||||.+.-++++.++|||.|||.+||++. |..||.+....+ ....+.....
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-------------VI~~iEnGeR 610 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-------------VIGHIENGER 610 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-------------eEEEecCCCC
Confidence 87777776677889999999999999999999999999999987 999996543322 1122222222
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
...++.++..+..++.+||..+|.+||.+.|+...|+.+..
T Consensus 611 lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 23334444558899999999999999999999999986543
No 38
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-40 Score=347.17 Aligned_cols=247 Identities=25% Similarity=0.398 Sum_probs=210.7
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
+-|+..+.||.|+-|.|-.|+ ..+|+.+|||++.+.. ......+.+|+.+|+-++|||++++|+++.+..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 467888999999999999999 5689999999997652 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|.|.+++..++ .+++.++.+++.||+.|+.|+|..+ |+|||+||+|+|+|..+.+||+|||+|.+..++.-
T Consensus 92 Eyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred EecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 9999999999997665 7999999999999999999999986 99999999999999999999999999987554433
Q ss_pred ceeeccccCccCCchHhhhcCCC-CcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
-.+.||++.|.|||++++..| +.++||||+|||+|.|+||+.||..++...++..+ ..+.. ++. ...
T Consensus 168 --LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV----~~G~f-~MP-----s~I 235 (786)
T KOG0588|consen 168 --LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKV----QRGVF-EMP-----SNI 235 (786)
T ss_pred --ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHH----HcCcc-cCC-----CcC
Confidence 345799999999999999887 56999999999999999999999877766655432 12221 121 122
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+..+|+.+|+..||++|.|+.||++.
T Consensus 236 ----s~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 236 ----SSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ----CHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2348899999999999999999999875
No 39
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-40 Score=309.37 Aligned_cols=250 Identities=25% Similarity=0.357 Sum_probs=210.3
Q ss_pred HhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
.+.++|+..+.||+|.||.||.|+ .+++-.||+|++.+. ......++.+|+++-+.|+||||+++|++|.+....|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 456799999999999999999999 557788999998764 2334567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 489 LIYEYLENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
+++||..+|++...|.+ ...++++.....++.|+|.|+.|+|... ||||||||+|+|++..+..||+|||-+....
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999999983 3456999999999999999999999885 9999999999999999999999999986433
Q ss_pred ccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 568 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
.....+.+||+.|.+||...+..++.++|+|++|++.||++.|..||.......... ..... +...
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYk--rI~k~-----~~~~---- 241 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYK--RIRKV-----DLKF---- 241 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHH--HHHHc-----cccC----
Confidence 333456899999999999999999999999999999999999999997665433222 11111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+........+++.+|+..+|.+|.+..|+++.
T Consensus 242 ---p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 242 ---PSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ---CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 12223348899999999999999999998764
No 40
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.2e-39 Score=334.23 Aligned_cols=254 Identities=29% Similarity=0.446 Sum_probs=209.2
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.++|+..+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 3578889999999999999999888889999998653 234578899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 999999999743 456899999999999999999999986 9999999999999999999999999998765433222
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||++....++.++|||||||++|+|++ |+.||..........+. . ..... .....++
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~---~-~~~~~-----~~~~~~~- 230 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL---Q-RGYRM-----PRMENCP- 230 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH---H-cCCCC-----CCCCCCC-
Confidence 233446778999999988889999999999999999998 99999655443332221 1 11110 0111222
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 231 ---~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 231 ---DELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 348899999999999999999999999985
No 41
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=319.55 Aligned_cols=263 Identities=22% Similarity=0.299 Sum_probs=209.9
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCccc--HHHHHHHHHHHHhCCCCceeeEeeEEE--eCCeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQG--NREFINEIGMISALQHPNLVKLYGCCI--EGNQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 489 (756)
.++|+..+.|++|+||.||+|+ .+++..||+|+++...... --...+|+.+|.+.+|||||.+-.+.. +-+.+|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 4578899999999999999999 5678999999997653221 234689999999999999999988875 3467999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|||||+. +|..++..-..++...++..++.|+++|++|||..+ |+|||||++|+|+...|.+||+|||+||.++..
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999987 899999887789999999999999999999999997 999999999999999999999999999987765
Q ss_pred CcceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccc-------
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMEL------- 641 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 641 (756)
.. ..+..+-|.+|.|||.+.+. .|+++.|+||+|||+.|++++++-|.+....+.++..........-...
T Consensus 231 ~k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 231 LK-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred cc-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence 33 23456679999999999874 5999999999999999999999999888777666544433322111100
Q ss_pred ----------cccCCCCCCCHH-HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 642 ----------VDTNPGSNFDKE-QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 642 ----------~~~~~~~~~~~~-~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
........|... ....-.+++...+..||.+|-|++|.++.
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 001111111111 22345688889999999999999998764
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.5e-39 Score=344.97 Aligned_cols=262 Identities=22% Similarity=0.346 Sum_probs=205.1
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.++|+..+.||+|+||.||+|+. .++..||+|.+.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 46889999999999999999995 478899999987542 2334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 158 (331)
T cd06649 84 HMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 158 (331)
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc--
Confidence 99999999999754 36899999999999999999999863 49999999999999999999999999997553321
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh---cCccc----------
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE---QGKLM---------- 639 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~---------- 639 (756)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...+...+......... .+...
T Consensus 159 -~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 159 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred -cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccc
Confidence 2345689999999999988999999999999999999999999965443322111100000 00000
Q ss_pred --------------------c-ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 --------------------E-LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 --------------------~-~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+ +................+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 000000000011123458899999999999999999999865
No 43
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.7e-39 Score=353.71 Aligned_cols=255 Identities=28% Similarity=0.448 Sum_probs=202.4
Q ss_pred hcCccccCcccCCCCccEEEeec------cCCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 486 (756)
.++|+..+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+.+++.+ +|||||+++++|.+++.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45788899999999999999963 245689999986542 23346788999999999 89999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC-----------------------------------------------------------
Q 004400 487 LLLIYEYLENNSLARALFEHR----------------------------------------------------------- 507 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------------- 507 (756)
.++|||||++|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999986422
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 508 ---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 508 ---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
..+++..+.+++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 24788999999999999999999986 999999999999999999999999999865433221
Q ss_pred -eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchh-hHHHHHHHHHhcCccccccccCCCCC
Q 004400 573 -ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMF-YLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 573 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
......++..|+|||++.+..++.++|||||||++|||++ |..||...... .... ... .+..... ...
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~---~~~-~~~~~~~-----~~~ 341 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYK---MIK-EGYRMLS-----PEC 341 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHH---HHH-hCccCCC-----CCC
Confidence 1222345678999999999999999999999999999998 88888543221 1111 111 1111110 011
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
....+.+++.+||+.||++||++.||++.|++
T Consensus 342 ----~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 342 ----APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ----CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 12348899999999999999999999999985
No 44
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.4e-39 Score=353.87 Aligned_cols=258 Identities=28% Similarity=0.436 Sum_probs=203.2
Q ss_pred hhcCccccCcccCCCCccEEEeec------cCCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCC
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGN 485 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 485 (756)
..++|+..+.||+|+||.||+|+. .++..||+|.+.... ......+.+|+++++.+ +|+|||+++++|.+.+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 345788999999999999999873 234579999997542 23345688999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcC----------------------------------------------------------
Q 004400 486 QLLLIYEYLENNSLARALFEHR---------------------------------------------------------- 507 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------------------- 507 (756)
..++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999986321
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc-eee
Q 004400 508 -----------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH-IST 575 (756)
Q Consensus 508 -----------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~-~~~ 575 (756)
..+++..+.+++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++........ ...
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 24788899999999999999999986 999999999999999999999999999754432221 122
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......... .... ..+..... ....
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~--~~~~-~~~~~~~~-----~~~~---- 340 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF--YKMV-KRGYQMSR-----PDFA---- 340 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH--HHHH-HcccCccC-----CCCC----
Confidence 2345678999999998899999999999999999997 99999654321111 1111 11110000 0111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
...+.+++.+||+.||.+||++.+|+++|+++
T Consensus 341 ~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 341 PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 23488999999999999999999999999864
No 45
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.1e-39 Score=348.04 Aligned_cols=253 Identities=20% Similarity=0.227 Sum_probs=205.1
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999954 68999999987542 223456888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 999999999999654 46899999999999999999999986 99999999999999999999999999985443
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... ......... ......
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~~~~~~---~~~~~~ 226 (333)
T cd05600 154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK---YWKETLQRP---VYDDPR 226 (333)
T ss_pred -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH---hccccccCC---CCCccc
Confidence 2234579999999999999899999999999999999999999997655433322111 101110100 000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
......+.+++.+|+..+|.+||++.++++.
T Consensus 227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1123458899999999999999999999865
No 46
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.3e-39 Score=331.00 Aligned_cols=252 Identities=25% Similarity=0.434 Sum_probs=205.9
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
++|...+.||+|+||.||+|...++..+|+|.+.... .....+.+|+.++++++||||+++++++.+.+..++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3577888999999999999998777789999987532 345679999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+|+|.+++......+++..++.++.||+.||+|||+.+ ++|+||||+||+++.++.+||+|||.++...........
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV 159 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence 99999999765557899999999999999999999986 999999999999999999999999999865433222222
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
...++..|+|||......++.++|||||||++|||++ |+.||...+........ ..+..... ....
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~~-----~~~~---- 226 (256)
T cd05113 160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV----SQGLRLYR-----PHLA---- 226 (256)
T ss_pred CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH----hcCCCCCC-----CCCC----
Confidence 2346678999999988889999999999999999998 99998654433222211 11111110 0111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
...+.+++.+||+.+|.+||++.++++.|+
T Consensus 227 ~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 227 SEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 245889999999999999999999998764
No 47
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.2e-39 Score=346.13 Aligned_cols=242 Identities=25% Similarity=0.321 Sum_probs=198.2
Q ss_pred CcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 422 NNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.||+|+||.||+|. ..+|+.||+|++.... ......+.+|+.++++++||||+++++++.+++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999998 4578999999987532 223456788999999999999999999999999999999999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeecc
Q 004400 498 SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRV 577 (756)
Q Consensus 498 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 577 (756)
+|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+||+++.++.+||+|||+++....... .....
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~ 155 (323)
T cd05571 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTF 155 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC-cccce
Confidence 999998754 47899999999999999999999997 99999999999999999999999999875322211 12345
Q ss_pred ccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHH
Q 004400 578 AGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMV 657 (756)
Q Consensus 578 ~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (756)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...+........ .. ... .++......
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~---~~-~~~----------~~p~~~~~~ 221 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---LM-EEI----------RFPRTLSPE 221 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHH---Hc-CCC----------CCCCCCCHH
Confidence 7999999999999989999999999999999999999999765543332211 10 100 111122334
Q ss_pred HHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 658 MINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 658 l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
+.+++.+|++.||++|| ++.++++.
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 88999999999999999 78888653
No 48
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.6e-39 Score=333.05 Aligned_cols=255 Identities=29% Similarity=0.466 Sum_probs=208.3
Q ss_pred hhcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
..++|+..+.||+|++|.||+|...+++.||+|.++... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 345788899999999999999998788899999986543 3456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++++|.+++.... ..+++..+..++.|++.|++|||+.| |+||||||+||++++++.+||+|||+++........
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 99999999997543 56899999999999999999999987 999999999999999999999999999866533222
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......++..|+|||++.+..++.++||||||+++|||++ |+.||............ .. .... ..+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~---~~-~~~~---------~~~ 226 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV---DQ-GYRM---------PCP 226 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---Hc-CCCC---------CCC
Confidence 1222233468999999988889999999999999999999 99998665433322211 11 1100 011
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
......+.+++.+|++.+|++||++.++++.||.
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1123458899999999999999999999999984
No 49
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.5e-39 Score=338.89 Aligned_cols=262 Identities=22% Similarity=0.285 Sum_probs=203.3
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
++|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 4688899999999999999995 468899999986542 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|++++.+..+. .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 81 YVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccccc
Confidence 99998776554 44457899999999999999999999986 999999999999999999999999999865443332
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHH------------HhcCcccc
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVL------------KEQGKLME 640 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~------------~~~~~~~~ 640 (756)
......||+.|+|||++.+..++.++|||||||++|||++|+.||............... ........
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 333457899999999999888999999999999999999999999765432221111100 00000000
Q ss_pred ccccCCCC------CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 641 LVDTNPGS------NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 641 ~~~~~~~~------~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
...+.... .+.......+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 001112345899999999999999999999875
No 50
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.7e-40 Score=326.39 Aligned_cols=248 Identities=23% Similarity=0.379 Sum_probs=210.5
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcc---cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ---GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
..+|++.+.||+|.||.|-+|. ...|+.||||.+++..-. +.-.+.+|++||+.++||||+.+|.+|...+.+.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3578888999999999999999 688999999999875433 334578899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||..+|.|.|++.+. ..+++.+++.++.||..|+.|+|.++ ++|||+|.+|||+|.++.+||+|||++-++....
T Consensus 132 MEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 132 MEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 9999999999999765 48999999999999999999999986 9999999999999999999999999998776544
Q ss_pred cceeeccccCccCCchHhhhcCCC-CcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
. .++++|++-|.+||+..+..| ++.+|.||+||++|-++.|..||.+.+...++... . .+...+
T Consensus 208 f--LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQI---s-~GaYrE--------- 272 (668)
T KOG0611|consen 208 F--LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQI---S-RGAYRE--------- 272 (668)
T ss_pred H--HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHh---h-cccccC---------
Confidence 3 467899999999999998876 67899999999999999999999887765554322 1 111111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
++.+....-+|++|+..+|++|.|+.+|....
T Consensus 273 --P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 273 --PETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred --CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 11112256788899999999999999996654
No 51
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.5e-39 Score=336.94 Aligned_cols=261 Identities=21% Similarity=0.322 Sum_probs=202.5
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|...+.||+|+||.||+|+. .+++.||+|.++... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 4688899999999999999984 578999999986542 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++ +|.+++......+++..+..++.||+.||+|||++| |+||||||+|||++.++.+||+|||+++........
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~- 159 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT- 159 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc-
Confidence 985 899988766667899999999999999999999986 999999999999999999999999999754332221
Q ss_pred eeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC------------cccc
Q 004400 574 STRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG------------KLME 640 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------------~~~~ 640 (756)
.....|++.|+|||++.+ ..++.++||||+||++|||++|+.||...+............... +...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 233468999999999875 568999999999999999999999997665443332221111100 0000
Q ss_pred ccccCCCC----CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 641 LVDTNPGS----NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 641 ~~~~~~~~----~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
...+.... ...+.......+++.+|++.||.+|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 000112235789999999999999999999975
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2e-39 Score=341.22 Aligned_cols=245 Identities=23% Similarity=0.326 Sum_probs=201.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 3688889999999999999995 478999999986432 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||++| |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 999999999999754 47899999999999999999999987 999999999999999999999999999865432
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. ... .++
T Consensus 155 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i---~~-~~~----------~~~ 218 (291)
T cd05612 155 --TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKI---LA-GKL----------EFP 218 (291)
T ss_pred --cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-CCc----------CCC
Confidence 12356899999999999888999999999999999999999999766543332211 11 110 011
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPS-----MSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt-----~~ev~~~ 682 (756)
......+.+++.+|++.||.+||+ ++++++.
T Consensus 219 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 219 RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 111234889999999999999995 7776643
No 53
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.7e-39 Score=336.04 Aligned_cols=255 Identities=30% Similarity=0.496 Sum_probs=206.5
Q ss_pred cCccccCcccCCCCccEEEeeccC------CcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLAD------GTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
++|+..+.||+|+||.||+|.... ...||+|.+.... ......|.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998532 2579999986543 233457899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC
Q 004400 489 LIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL 553 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~ 553 (756)
++|||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 9999999999999997432 45788999999999999999999986 99999999999999999
Q ss_pred CEEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHH
Q 004400 554 NSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALV 631 (756)
Q Consensus 554 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 631 (756)
.+||+|||+++....... .......+++.|+|||.+....++.++|||||||++|||++ |..||............
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i-- 239 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI-- 239 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--
Confidence 999999999986533222 12233456889999999998899999999999999999998 99999765443332211
Q ss_pred HHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 632 LKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
..+.... .+...+..+.+++.+||+.+|.+||++.||++.|+++
T Consensus 240 --~~~~~~~---------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 --RSRQLLP---------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred --HcCCcCC---------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111111 1222334589999999999999999999999999853
No 54
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-41 Score=358.45 Aligned_cols=257 Identities=27% Similarity=0.451 Sum_probs=216.4
Q ss_pred CccccCcccCCCCccEEEeecc----CCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
...+.++||.|.||.||+|+++ ....||||.++.. ......+|..|+.||.++.||||+++-|+.......++|.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 3456799999999999999964 2357999999875 3455678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
|||++|+|+.+|+.+...+++.+...+.++||.|++||-+.+ +|||||.++|||++.+..+||+|||++|...++..
T Consensus 710 EyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 999999999999988889999999999999999999999886 99999999999999999999999999997765543
Q ss_pred ceeecccc--CccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 572 HISTRVAG--TIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 572 ~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
...++.-| +++|.|||.+..++++.++|||||||+|||.++ |.+||+.....+.... +.+ ...-
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka---Ie~----------gyRL 853 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA---IEQ----------GYRL 853 (996)
T ss_pred ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH---HHh----------ccCC
Confidence 33333323 469999999999999999999999999999886 9999977655443321 111 1112
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 689 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 689 (756)
..+++++..+.+|+..||++|-.+||++.||+..|++....
T Consensus 854 PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 854 PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 22344555699999999999999999999999999976553
No 55
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=346.10 Aligned_cols=245 Identities=21% Similarity=0.347 Sum_probs=201.8
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 5788899999999999999995 468999999986531 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 98 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT- 172 (329)
T ss_pred cCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-
Confidence 999999999999754 47899999999999999999999986 9999999999999999999999999998654322
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........... .. .+.. .+ ...+
T Consensus 173 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~---i~-~~~~-~~-----p~~~- 238 (329)
T PTZ00263 173 ---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEK---IL-AGRL-KF-----PNWF- 238 (329)
T ss_pred ---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHH---Hh-cCCc-CC-----CCCC-
Confidence 235799999999999998899999999999999999999999976654332211 11 1110 00 1112
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPS-----MSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt-----~~ev~~~ 682 (756)
...+.+++.+||+.||++||+ +.++++.
T Consensus 239 ---~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 239 ---DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 234789999999999999997 5666543
No 56
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.8e-39 Score=331.75 Aligned_cols=254 Identities=26% Similarity=0.447 Sum_probs=206.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.+|...+.||+|+||.||+|.. .+++.||+|.+... ......+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4577889999999999999995 45889999998653 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++++|.+++... ...+++..+..++.|++.||+|||+.| ++||||||+||++++++.+||+|||+++.........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 999999999754 346899999999999999999999986 9999999999999999999999999998655433222
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||...+....... ... ..... .....
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~---~~~-~~~~~-----~~~~~-- 230 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL---LEK-GYRME-----RPEGC-- 230 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HHC-CCCCC-----CCCCC--
Confidence 222334678999999998899999999999999999998 8999865543322211 111 11111 11122
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+..+.+++.+||+.+|++||++.+++++|+.+
T Consensus 231 --~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 231 --PPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred --CHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 24488999999999999999999999999853
No 57
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-39 Score=339.08 Aligned_cols=250 Identities=27% Similarity=0.400 Sum_probs=213.3
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe-EEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ-LLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lV~ 491 (756)
++|...+.+|+|+||.++..++ .+++.|++|.+.... ....+...+|+.++++++|||||.+.+.|.+++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5788889999999999999984 467899999986542 3334567899999999999999999999999888 99999
Q ss_pred EecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 492 EYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
+||+||++.+.+...+ ..++++.+.+++.|++.|+.|||++. |+|||||+.||+++.+..|||+|||+|+......
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998554 77999999999999999999999774 9999999999999999999999999999887765
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
. ...++.||+.||+||.+.+..|+.|+||||+||++|||++-+.+|...+...+..... ... ....
T Consensus 161 ~-~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~---------~~~----~~Pl 226 (426)
T KOG0589|consen 161 S-LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN---------RGL----YSPL 226 (426)
T ss_pred h-hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHh---------hcc----CCCC
Confidence 3 3455789999999999999999999999999999999999999998887765543211 111 1112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+......+..++..|++.+|+.||++.+++.+
T Consensus 227 p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 23334458899999999999999999999876
No 58
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.7e-38 Score=329.85 Aligned_cols=255 Identities=29% Similarity=0.460 Sum_probs=207.4
Q ss_pred cCccccCcccCCCCccEEEeecc----CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
++|+..+.||+|+||.||+|.+. +...||||.+.... ......|.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 57889999999999999999864 24579999987543 33346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+++++|.+++......+++..+.+++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999999999876668999999999999999999999986 9999999999999999999999999998765222
Q ss_pred c-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 571 T-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 571 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
. .......++..|+|||.+.+..++.++||||||+++||+++ |..||............ ....... ...
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~-----~~~ 231 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV----EDGYRLP-----PPM 231 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH----HcCCCCC-----CCC
Confidence 2 12222345678999999998899999999999999999998 99998654433322211 1111100 011
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
. .+..+.+++.+||+.+|++||++.||++.|+++
T Consensus 232 ~----~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 232 D----CPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred C----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 223488999999999999999999999999854
No 59
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.3e-38 Score=328.79 Aligned_cols=250 Identities=26% Similarity=0.444 Sum_probs=203.8
Q ss_pred CccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 417 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+|+..+.||+|+||.||+|...++..+|+|.+.... .....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 577889999999999999998777889999986432 2345788999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++............
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 9999999866567899999999999999999999987 9999999999999999999999999998654322221222
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
..++..|+|||.+.+..++.++||||||+++||+++ |+.||........... .. ...... .+...+
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~---~~-~~~~~~---------~~~~~~ 227 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVES---VS-AGYRLY---------RPKLAP 227 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHH---HH-cCCcCC---------CCCCCC
Confidence 234568999999998899999999999999999999 7889865443322211 11 111000 011123
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 656 MVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
..+.+++.+||+.+|++||++.|+++.|
T Consensus 228 ~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 228 TEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 3588999999999999999999999876
No 60
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=310.63 Aligned_cols=252 Identities=22% Similarity=0.332 Sum_probs=207.5
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
+++|+..+.||+|+|+.||++. .++|+.+|+|++..+ +..+.+++.+|+.+-+.++|||||++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 4677888899999999999998 567999999988654 3446788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC---CCEEEccCCccccCcc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD---LNSKISDFGLAKLDEE 568 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~---~~~kl~DFGla~~~~~ 568 (756)
|+|.||+|..-+-.. ...++..+..+++||++||.|+|.++ |||||+||+|+++-.. .-+|++|||+|....
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~- 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN- 164 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence 999999998777544 36788899999999999999999997 9999999999999543 348999999998766
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
........+||++|||||++.+.+|+..+|||+.||++|-++.|..||++++...+.+... ...- -++.....
T Consensus 165 -~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~--~g~y----d~~~~~w~ 237 (355)
T KOG0033|consen 165 -DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIK--AGAY----DYPSPEWD 237 (355)
T ss_pred -CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHh--cccc----CCCCcccC
Confidence 3333455789999999999999999999999999999999999999999877665554221 1110 11111222
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
... ....+++.+|+..||.+|.|+.|.++.
T Consensus 238 ~is----~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 238 TVT----PEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred cCC----HHHHHHHHHHhccChhhhccHHHHhCC
Confidence 223 347889999999999999999998765
No 61
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6.7e-39 Score=340.74 Aligned_cols=241 Identities=22% Similarity=0.324 Sum_probs=194.8
Q ss_pred ccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 424 IGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 424 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
||+|+||.||+|+. .+++.||+|.+... .......+.+|+.++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999995 46889999998653 233345678899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeecccc
Q 004400 500 ARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAG 579 (756)
Q Consensus 500 ~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~g 579 (756)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... .......|
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g 155 (312)
T cd05585 81 FHHLQRE-GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCG 155 (312)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccC
Confidence 9999754 46899999999999999999999986 9999999999999999999999999998543222 22334679
Q ss_pred CccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHH
Q 004400 580 TIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMI 659 (756)
Q Consensus 580 t~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 659 (756)
|+.|+|||++.+..++.++|||||||++|||++|+.||...+...... ..... . . .++......+.
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~---~~~~~-~-~---------~~~~~~~~~~~ 221 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYR---KILQE-P-L---------RFPDGFDRDAK 221 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHH---HHHcC-C-C---------CCCCcCCHHHH
Confidence 999999999999899999999999999999999999997654432221 11110 0 0 11112223488
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 660 NVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 660 ~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
+++.+||+.||++||++..+.+.|
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHHH
Confidence 999999999999998654443333
No 62
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.6e-39 Score=333.29 Aligned_cols=248 Identities=35% Similarity=0.596 Sum_probs=194.9
Q ss_pred ccCcccCCCCccEEEeecc-----CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 420 TDNNIGEGGFGPVYKGLLA-----DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 420 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
..+.||.|.||.||+|.+. .+..|+||.++... ....+.|.+|++.+++++||||++++|+|...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999966 35689999996532 33467899999999999999999999999988889999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc-
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT- 571 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~- 571 (756)
+++|+|.+++... ...+++..+..|+.|||+||+|||+.+ ++||||+++||++++++.+||+|||+++.......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999876 668999999999999999999999986 99999999999999999999999999986632222
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.......+...|+|||.+....++.++||||||+++||+++ |+.||.......... .. .......... .+
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~---~~-~~~~~~~~~~-----~~ 230 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIE---KL-KQGQRLPIPD-----NC 230 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHH---HH-HTTEETTSBT-----TS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc-cccccceecc-----ch
Confidence 22233457789999999999999999999999999999999 678885544333222 12 2222211111 12
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
...+.+++..||+.+|++||++.++++.|
T Consensus 231 ----~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 231 ----PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 23488999999999999999999999876
No 63
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-38 Score=330.07 Aligned_cols=255 Identities=29% Similarity=0.472 Sum_probs=211.9
Q ss_pred hhcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+..+|+..+.||+|+||.||+|...+++.+|+|.+..........+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 44678889999999999999999888999999999876555567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++|+|.+++... ...+++..+.+++.|++.||+|||+.| |+||||||+||++++++.+||+|||.+.........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999999999753 446899999999999999999999987 999999999999999999999999999765433222
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
.....++..|+|||.+....++.++||||||+++|+|++ |+.||............. ...... .+
T Consensus 161 -~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~----~~~~~~---------~~ 226 (261)
T cd05148 161 -SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT----AGYRMP---------CP 226 (261)
T ss_pred -ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH----hCCcCC---------CC
Confidence 223346778999999988889999999999999999998 899996655433333221 111111 11
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
......+.+++.+||+.+|++|||+.++++.|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 227 AKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 1222348899999999999999999999999984
No 64
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.9e-39 Score=344.78 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=204.5
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|. ..+++.||+|.++... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 468889999999999999999 4578999999987542 223456888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999999999876568999999999999999999999986 99999999999999999999999999986654443
Q ss_pred ceeeccccCccCCchHhhh------cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 572 HISTRVAGTIGYMAPEYAM------RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||.......... .+...........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~---~i~~~~~~~~~~~-- 232 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYN---NIMNFQRFLKFPE-- 232 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHH---HHHcCCCccCCCC--
Confidence 3334457999999999987 4567899999999999999999999996654332211 1111111111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... ...+.+++..|++ +|.+||++.++++.
T Consensus 233 -~~~~----~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 233 -DPKV----SSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -CCCC----CHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 1112 2347888999998 99999999998753
No 65
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.3e-38 Score=338.27 Aligned_cols=261 Identities=21% Similarity=0.350 Sum_probs=202.6
Q ss_pred hcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.++|+..+.||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++||||++++++|.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468899999999999999999954 68899999886542 2334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-- 158 (333)
T cd06650 84 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 158 (333)
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc--
Confidence 99999999999754 36899999999999999999999753 49999999999999999999999999987543321
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccc-------------
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM------------- 639 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------------- 639 (756)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||............... ..+...
T Consensus 159 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (333)
T cd06650 159 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCP-VEGDPAESETSPRPRPPGR 236 (333)
T ss_pred -cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCc-ccCCccccccCcccCCccc
Confidence 22356899999999999888999999999999999999999999654332211100000 000000
Q ss_pred -------------------cccccCCCCCCC-HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 -------------------ELVDTNPGSNFD-KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 -------------------~~~~~~~~~~~~-~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+.+........+ ......+.+++.+||+.||++||++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 237 PLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred hhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 000000000000 0112347899999999999999999999753
No 66
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-38 Score=331.98 Aligned_cols=255 Identities=27% Similarity=0.458 Sum_probs=204.6
Q ss_pred cCccccCcccCCCCccEEEeec-----cCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-----ADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
++|+..+.||+|+||.||+|.. .++..||+|.+..... .....+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4677889999999999999973 3567899999975432 334678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC
Q 004400 490 IYEYLENNSLARALFEH----------------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL 553 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~----------------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~ 553 (756)
||||+++|+|.+++... ...+++.....++.|++.||+|||+++ |+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 99999999999998632 134788999999999999999999987 99999999999999999
Q ss_pred CEEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHH
Q 004400 554 NSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALV 631 (756)
Q Consensus 554 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 631 (756)
.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||............
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~-- 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV-- 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--
Confidence 999999999986533221 22233446778999999988889999999999999999998 88898665433222211
Q ss_pred HHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 632 LKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
....... ....++ ..+.+++.+||+.+|++||++.+|.+.|.+|
T Consensus 240 --~~~~~~~-----~~~~~~----~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 240 --RKRQLLP-----CSEDCP----PRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred --HcCCcCC-----CCCCCC----HHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 1111111 111222 3488899999999999999999999999865
No 67
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.8e-38 Score=326.95 Aligned_cols=253 Identities=29% Similarity=0.477 Sum_probs=205.9
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
++|+..+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46788899999999999999988888999999875432 3467999999999999999999999875 456899999999
Q ss_pred CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 496 NNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 496 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
+++|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++...........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 99999999753 346899999999999999999999986 99999999999999999999999999986544332222
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||...+......+. .. .... ..+..
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~---~~-~~~~---------~~~~~ 227 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV---ER-GYRM---------PCPQD 227 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---Hc-CCCC---------CCCCc
Confidence 23345678999999988889999999999999999999 88898665543333221 11 1010 11112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
....+.+++.+|++.+|++|||+.++.+.|+.+
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 260 (260)
T cd05070 228 CPISLHELMLQCWKKDPEERPTFEYLQSFLEDY 260 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 234588999999999999999999999998853
No 68
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-38 Score=342.48 Aligned_cols=252 Identities=25% Similarity=0.261 Sum_probs=198.6
Q ss_pred CccccCcccCCCCccEEEeec----cCCcEEEEEEccccC----cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKS----KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 487 (756)
+|+..+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|+++++.+ +||||+++++++.+++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999874 368899999986531 22335678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 9999999999999998754 46899999999999999999999987 9999999999999999999999999998654
Q ss_pred ccCcceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 568 EENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
...........||+.|+|||++.+. .++.++|||||||++|||++|+.||.................. .+...
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~------~~~~~ 230 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK------CDPPF 230 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc------CCCCC
Confidence 3333333346799999999999765 4789999999999999999999999543322111111100000 01111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
.... ...+.+++.+|++.||++|| +++++++.
T Consensus 231 ~~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 231 PSFI----GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCC----CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1122 23478999999999999999 67777654
No 69
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=356.14 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=203.3
Q ss_pred CccccCcccCCCCccEEEeec-cC-CcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-AD-GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.|...+.||+|+||.||+|.. .+ +..||+|.+..........+.+|+.+++.++|||||+++++|..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 478889999999999999984 34 6788889876555555567788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 495 ENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 495 ~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999998863 2446889999999999999999999986 99999999999999999999999999986543322
Q ss_pred -ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 572 -HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 572 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. +.... .
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~---~~-~~~~~---------~ 291 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV---LY-GKYDP---------F 291 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-CCCCC---------C
Confidence 2234567999999999999989999999999999999999999999765443322211 11 11110 1
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
+......+.+++.+||+.+|++||++.+++.
T Consensus 292 ~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1112234889999999999999999999864
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2e-38 Score=339.23 Aligned_cols=242 Identities=25% Similarity=0.316 Sum_probs=197.5
Q ss_pred CcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 422 NNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.||+|+||.||+|. ..+++.||+|++... .......+.+|+++++.++||||+++++++.+++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 468999999999998 457899999998754 2233467888999999999999999999999999999999999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeecc
Q 004400 498 SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRV 577 (756)
Q Consensus 498 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 577 (756)
+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....... .....
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~-~~~~~ 155 (328)
T cd05593 81 ELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA-TMKTF 155 (328)
T ss_pred CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCccc-ccccc
Confidence 999988654 47899999999999999999999986 99999999999999999999999999875322211 22345
Q ss_pred ccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHH
Q 004400 578 AGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMV 657 (756)
Q Consensus 578 ~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (756)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...+....... ... .. ......+ ...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~---~~~-~~------~~~p~~~----~~~ 221 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL---ILM-ED------IKFPRTL----SAD 221 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHH---hcc-CC------ccCCCCC----CHH
Confidence 799999999999988999999999999999999999999976544322211 100 00 0111122 334
Q ss_pred HHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 658 MINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 658 l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
+.+++.+|++.||++|| ++.|+++.
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 88999999999999997 88888764
No 71
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.3e-38 Score=339.23 Aligned_cols=255 Identities=25% Similarity=0.446 Sum_probs=204.4
Q ss_pred cCccccCcccCCCCccEEEeecc-CCc----EEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGT----AIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
.+|+..+.||+|+||.||+|++. ++. .||+|.++... ....+++.+|+.+++.++||||++++++|..+ ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 47889999999999999999853 343 38999986542 33456789999999999999999999999864 5789
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|+||+++|+|.+++......+++..+.+++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999999999877667899999999999999999999986 999999999999999999999999999876543
Q ss_pred Ccce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 570 NTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 570 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
.... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.......... ....+..... .
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~----~~~~~~~~~~-----~ 233 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS----ILEKGERLPQ-----P 233 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH----HHhCCCCCCC-----C
Confidence 3222 122334678999999999999999999999999999998 999986554332221 1111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 687 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 687 (756)
... ...+.+++.+||+.+|.+||++.+++..+....
T Consensus 234 ~~~----~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 234 PIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 112 234788999999999999999999999988653
No 72
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3e-38 Score=330.53 Aligned_cols=254 Identities=29% Similarity=0.506 Sum_probs=206.6
Q ss_pred hcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 487 (756)
.++|...+.||+|+||.||+|... +++.||||.++..... ..+.+.+|++++++++|+||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 346788899999999999999853 3478999998765433 457899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC
Q 004400 488 LLIYEYLENNSLARALFEHR-------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 554 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~ 554 (756)
++||||+++|+|.+++...+ ..+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence 99999999999999997432 35789999999999999999999986 999999999999999999
Q ss_pred EEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHH
Q 004400 555 SKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVL 632 (756)
Q Consensus 555 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 632 (756)
+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...+.........
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~-- 238 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT-- 238 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--
Confidence 99999999975432221 11233456788999999999999999999999999999998 999986554443332221
Q ss_pred HhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 633 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.+..... .... ...+.+++.+||+.+|++||++.||++.|+
T Consensus 239 --~~~~~~~-----~~~~----~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 --QGRLLQR-----PRTC----PSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --cCCcCCC-----CCCC----CHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111111 1112 234889999999999999999999999886
No 73
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4e-38 Score=333.51 Aligned_cols=262 Identities=21% Similarity=0.338 Sum_probs=199.9
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 46899999999999999999995 4789999999875432 223467889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+. ++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 158 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH- 158 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCCc-
Confidence 996 5788888766667899999999999999999999997 99999999999999999999999999975432221
Q ss_pred eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhcCcc---c---cc--c
Q 004400 573 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQGKL---M---EL--V 642 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~---~---~~--~ 642 (756)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ............... . .. .
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T cd07869 159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHF 238 (303)
T ss_pred cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccc
Confidence 1233568999999999875 45889999999999999999999999654321 111111111000000 0 00 0
Q ss_pred ccCCCCCCCH----------HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 643 DTNPGSNFDK----------EQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 643 ~~~~~~~~~~----------~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.+.......+ .....+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000000 01134778999999999999999999975
No 74
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2e-38 Score=338.57 Aligned_cols=242 Identities=26% Similarity=0.322 Sum_probs=196.8
Q ss_pred CcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 422 NNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.||+|+||.||+|. ..+|+.||+|.+... .......+.+|+++++.++||||++++++|...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 469999999999999 457899999998754 2233456788999999999999999999999999999999999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeecc
Q 004400 498 SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRV 577 (756)
Q Consensus 498 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 577 (756)
+|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+|||++.++.+||+|||+++....... .....
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~ 155 (323)
T cd05595 81 ELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTF 155 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-ccccc
Confidence 999888654 37899999999999999999999986 99999999999999999999999999875322211 12345
Q ss_pred ccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHH
Q 004400 578 AGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMV 657 (756)
Q Consensus 578 ~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (756)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ ..... .....+ ...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~--~~~~~--------~~p~~~----~~~ 221 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEI--------RFPRTL----SPE 221 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH--hcCCC--------CCCCCC----CHH
Confidence 7999999999999889999999999999999999999999765543322211 00000 011122 234
Q ss_pred HHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 658 MINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 658 l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
+.+++.+|++.||++|| ++.++++.
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 78999999999999998 78888653
No 75
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.1e-38 Score=323.63 Aligned_cols=247 Identities=28% Similarity=0.429 Sum_probs=201.4
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHH
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLA 500 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 500 (756)
+.||+|+||.||+|...+++.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999875432 23456889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccC
Q 004400 501 RALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGT 580 (756)
Q Consensus 501 ~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt 580 (756)
+++......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...............++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence 999766667899999999999999999999986 99999999999999999999999999975433222222223456
Q ss_pred ccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHH
Q 004400 581 IGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMI 659 (756)
Q Consensus 581 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 659 (756)
+.|+|||++.++.++.++||||||+++||+++ |..||............ ........ +......+.
T Consensus 158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~----~~~~~~~~---------~~~~~~~~~ 224 (250)
T cd05085 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV----EKGYRMSC---------PQKCPDDVY 224 (250)
T ss_pred ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH----HcCCCCCC---------CCCCCHHHH
Confidence 78999999998889999999999999999998 99999655433222111 11111111 111234588
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 660 NVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 660 ~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
+++.+|++.+|++||++.|+++.|.
T Consensus 225 ~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 225 KVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHcccCcccCCCHHHHHHHhc
Confidence 9999999999999999999999876
No 76
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=337.28 Aligned_cols=244 Identities=28% Similarity=0.453 Sum_probs=205.6
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
-|...+.||.|+||.||-|+ ..+...||||++.-.. .....++..|+..|++++|||+|.+-|+|..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 45667889999999999999 5678899999987543 3345789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
||-| +-.|.+.-+++++-+.++..|+.+.+.||+|||+.+ .||||||+.|||+++.|.|||+|||.|.+..+.
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA--- 179 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA--- 179 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch---
Confidence 9955 888888888889999999999999999999999986 999999999999999999999999999876553
Q ss_pred eeeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
..++|||.|||||++. .+.|+-|+||||+|+.+.|+...++|+...+-+..+-. +.. .+-+. -
T Consensus 180 --nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH---IAQ-NesPt--------L 245 (948)
T KOG0577|consen 180 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQ-NESPT--------L 245 (948)
T ss_pred --hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH---HHh-cCCCC--------C
Confidence 3478999999999986 47899999999999999999999999977765443211 111 11111 1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
-..+....+..++..|++.-|.+|||..++++
T Consensus 246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 246 QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 13345667999999999999999999999854
No 77
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=341.91 Aligned_cols=246 Identities=23% Similarity=0.316 Sum_probs=201.1
Q ss_pred hcCccccCcccCCCCccEEEeeccC--CcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLAD--GTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
.++|...+.||+|+||.||+|.... +..||+|.+... .......+.+|+.+++.++||||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3578889999999999999998543 368999998643 22334568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.| |+||||||+|||++.++.+||+|||+++.....
T Consensus 109 v~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 99999999999999754 36899999999999999999999997 999999999999999999999999999865432
Q ss_pred CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+....... ... +. .. ....
T Consensus 185 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~---i~~-~~-~~-----~p~~ 250 (340)
T PTZ00426 185 ----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK---ILE-GI-IY-----FPKF 250 (340)
T ss_pred ----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH---Hhc-CC-CC-----CCCC
Confidence 2245799999999999988899999999999999999999999976654322211 111 11 00 0111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
.+ ..+.+++.+|++.+|++|+ +++++++.
T Consensus 251 ~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 251 LD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 22 3478899999999999995 78887654
No 78
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.1e-38 Score=346.07 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=203.3
Q ss_pred hcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccC-cccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 486 (756)
.++|.+.+.||+|+||.||+|+.. .+..||||++.... ....+.+.+|+++++++. |||||+++++|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 467888999999999999999842 23469999996543 233467899999999996 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC-----------------------------------------------------------
Q 004400 487 LLLIYEYLENNSLARALFEHR----------------------------------------------------------- 507 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------------- 507 (756)
.++|||||++|+|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999886421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC
Q 004400 508 ------------------------------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK 551 (756)
Q Consensus 508 ------------------------------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~ 551 (756)
..+++..+..++.|+++||+|||+.+ |+||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence 24788889999999999999999986 999999999999999
Q ss_pred CCCEEEccCCccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHH
Q 004400 552 DLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWA 629 (756)
Q Consensus 552 ~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~ 629 (756)
++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......... +
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~-~- 350 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF-Y- 350 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH-H-
Confidence 999999999999865432221 1223457788999999998889999999999999999997 88998543221111 0
Q ss_pred HHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 630 LVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
... ..+.... .+......+.+++.+||+.+|++||++.+|.++|++.
T Consensus 351 ~~~-~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 351 NKI-KSGYRMA---------KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHH-hcCCCCC---------CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 011 1111111 1112234588999999999999999999999999864
No 79
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-39 Score=322.32 Aligned_cols=256 Identities=26% Similarity=0.347 Sum_probs=198.1
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-----eEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN-----QLLLI 490 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lV 490 (756)
.|...+++|.|+||.||+|. ..++..||||+...+... --+|+++|+++.|||||++..+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 46677899999999999999 456799999998654321 236999999999999999999887432 34689
Q ss_pred EEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC-CCEEEccCCccccC
Q 004400 491 YEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFGLAKLD 566 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~-~~~kl~DFGla~~~ 566 (756)
||||+. +|.+.++. .+..++.-.+.-+..||.+||+|||+.+ |+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999987 89888873 3567888899999999999999999986 9999999999999977 88999999999977
Q ss_pred cccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccc---
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV--- 642 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 642 (756)
....... ...-|..|.|||.+.+ ..|+.+.||||.||++.||+-|++-|.+++..+.+.....+.......++.
T Consensus 177 ~~~epni--SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 177 VKGEPNI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred ccCCCce--eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence 6544432 2345778999999988 569999999999999999999999998876655443333332221111111
Q ss_pred -----------ccCCCCC-CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 643 -----------DTNPGSN-FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 643 -----------~~~~~~~-~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.+.+... +......+..+++.++++.+|.+|.++.|++..
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0111101 222334468899999999999999999998643
No 80
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.5e-38 Score=330.63 Aligned_cols=258 Identities=28% Similarity=0.499 Sum_probs=208.9
Q ss_pred hcCccccCcccCCCCccEEEeec------cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
.++|...+.||+|+||.||++.. .++..+|+|.+..........+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 35788899999999999999974 234568999987665555678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEE
Q 004400 489 LIYEYLENNSLARALFEHR------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSK 556 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~k 556 (756)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+.| ++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999999997432 24899999999999999999999986 99999999999999999999
Q ss_pred EccCCccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHh
Q 004400 557 ISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKE 634 (756)
Q Consensus 557 l~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 634 (756)
|+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||............ .
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i----~ 236 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI----T 236 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----H
Confidence 9999999865432221 1223446788999999988889999999999999999998 89998655433322211 1
Q ss_pred cCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 635 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
.+..... ....+ ..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 237 ~~~~~~~-----~~~~~----~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 237 QGRVLQR-----PRTCP----KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred cCCcCCC-----CCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1111111 11222 348999999999999999999999999986643
No 81
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=318.19 Aligned_cols=262 Identities=24% Similarity=0.323 Sum_probs=205.5
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcc--cHHHHHHHHHHHHhCCCCc-eeeEeeEEEeCC------
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ--GNREFINEIGMISALQHPN-LVKLYGCCIEGN------ 485 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 485 (756)
..|...++||+|+||+||+|+ ..+|+.||+|++...... .-....+|+.++++++|+| ||++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 346666789999999999999 668899999999765432 3356789999999999999 999999999877
Q ss_pred eEEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCc
Q 004400 486 QLLLIYEYLENNSLARALFEHR---LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGL 562 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGl 562 (756)
..++|+||++. +|..++.... ..++...+..++.||++||+|||+++ |+||||||.|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence 88999999976 8999997655 45777899999999999999999997 99999999999999999999999999
Q ss_pred cccCcccCcceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc---c
Q 004400 563 AKLDEEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK---L 638 (756)
Q Consensus 563 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~ 638 (756)
|+........ .+..++|.+|.|||++.+. .|+...||||+|||++||++++.-|.+.................. .
T Consensus 167 Ara~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 167 ARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred HHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 9966533332 3445789999999999886 799999999999999999999998977766544332222222111 1
Q ss_pred c---cccccCC-------CCCCCHHH---HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 639 M---ELVDTNP-------GSNFDKEQ---VMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 639 ~---~~~~~~~-------~~~~~~~~---~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
. ...+-.. ........ .....+++.+|++.+|.+|.+++.++.+
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1 1111110 00111111 1267899999999999999999998775
No 82
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.1e-38 Score=333.49 Aligned_cols=260 Identities=25% Similarity=0.388 Sum_probs=197.4
Q ss_pred cCccccCcccCCCCccEEEeec-c-CCcEEEEEEccccC--cccHHHHHHHHHHHHhC---CCCceeeEeeEEEe-----
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-A-DGTAIAVKQLSSKS--KQGNREFINEIGMISAL---QHPNLVKLYGCCIE----- 483 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 483 (756)
++|...+.||+|+||.||+|+. . +++.||+|.+.... ......+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688889999999999999985 3 46889999886542 22234567788777766 69999999999863
Q ss_pred CCeEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCc
Q 004400 484 GNQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGL 562 (756)
Q Consensus 484 ~~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGl 562 (756)
....++||||++ ++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999997 5899888643 345899999999999999999999986 99999999999999999999999999
Q ss_pred cccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC---ccc
Q 004400 563 AKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG---KLM 639 (756)
Q Consensus 563 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~ 639 (756)
++..... .......||+.|+|||.+....++.++|||||||++|||++|+.||................... ...
T Consensus 157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 9865433 22334568999999999988899999999999999999999999997765544333222111100 000
Q ss_pred -------cccccCCCC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 640 -------ELVDTNPGS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 640 -------~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
......... ...+.....+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000000 001112335789999999999999999999975
No 83
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.2e-38 Score=343.96 Aligned_cols=253 Identities=21% Similarity=0.275 Sum_probs=196.6
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||+||+|. ..+++.||+|++.... ......+.+|+.++.+++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 478889999999999999998 4568999999986532 223356788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||++| |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 999999999999754 47899999999999999999999986 99999999999999999999999999875432110
Q ss_pred ----------------------------------ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCC
Q 004400 572 ----------------------------------HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 617 (756)
Q Consensus 572 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 617 (756)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0012357999999999999989999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhh--cCCCCCCCCHHHHHHH
Q 004400 618 TKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCA--NASPTIRPSMSSVLRM 682 (756)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~--~~~P~~RPt~~ev~~~ 682 (756)
...+........ ........+ + .....+. .+.+++.+++ ..++..||+++||++.
T Consensus 237 ~~~~~~~~~~~i---~~~~~~~~~--p-~~~~~s~----~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 237 CSETPQETYKKV---MNWKETLIF--P-PEVPISE----KAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCHHHHHHHH---HcCcCcccC--C-CcCCCCH----HHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 766543322211 110000111 1 1111232 2555555533 3344567999999764
No 84
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.3e-38 Score=345.98 Aligned_cols=252 Identities=20% Similarity=0.300 Sum_probs=197.6
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.|...+.||+|+||+||+|+ ..+++.||+|++.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 57788999999999999998 4578899999986532 2334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC--
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN-- 570 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~-- 570 (756)
|+++|+|.+++.... .+++..+..++.||+.||+|||+.| |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999987543 6899999999999999999999986 9999999999999999999999999976331100
Q ss_pred --------------------------------------------cceeeccccCccCCchHhhhcCCCCcccchhhHHHH
Q 004400 571 --------------------------------------------THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIV 606 (756)
Q Consensus 571 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~ 606 (756)
........||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 000123579999999999998889999999999999
Q ss_pred HHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHH--hhcCCCCCCCCHHHHHHH
Q 004400 607 ALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALL--CANASPTIRPSMSSVLRM 682 (756)
Q Consensus 607 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~~P~~RPt~~ev~~~ 682 (756)
+|||++|+.||...+....... .......... ......++ .+.+++.+ |+..+|..||++.++++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~---i~~~~~~~~~---~~~~~~s~----~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLK---VINWENTLHI---PPQVKLSP----EAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHH---HHccccccCC---CCCCCCCH----HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999999966543322111 1110000011 11112233 36677766 556677779999999764
No 85
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.1e-38 Score=332.36 Aligned_cols=257 Identities=27% Similarity=0.486 Sum_probs=208.8
Q ss_pred cCccccCcccCCCCccEEEeec------cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
++|...+.||+|+||.||+|.. .++..+++|.+........+.+.+|++++++++|+||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4677889999999999999973 2456799999876655555789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC
Q 004400 490 IYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 554 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~ 554 (756)
||||+++++|.+++.... ..+++..+++++.|++.||+|||++| |+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999997432 34899999999999999999999997 999999999999999999
Q ss_pred EEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHH
Q 004400 555 SKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVL 632 (756)
Q Consensus 555 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 632 (756)
+||+|||+++....... .......++..|+|||++....++.++|||||||++|||++ |+.||...........
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~---- 237 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC---- 237 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----
Confidence 99999999975543222 12233457889999999998899999999999999999999 9999865544332221
Q ss_pred HhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 633 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
...+..... +...+..+.+++.+||+.+|++||++.+|+++|+++..
T Consensus 238 ~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 238 ITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 111111111 11123358899999999999999999999999986633
No 86
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.2e-38 Score=324.06 Aligned_cols=247 Identities=27% Similarity=0.422 Sum_probs=198.1
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++||||++++++|..+...++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999995 578999999876542 33446789999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee-eccc
Q 004400 500 ARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS-TRVA 578 (756)
Q Consensus 500 ~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~-~~~~ 578 (756)
.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......... ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9999766667899999999999999999999986 99999999999999999999999999975443211111 1112
Q ss_pred cCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHH
Q 004400 579 GTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMV 657 (756)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (756)
++..|+|||.+.++.++.++||||||+++|||++ |..||........... . ...... ..+...+..
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~---~-~~~~~~---------~~~~~~~~~ 224 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREA---I-EQGVRL---------PCPELCPDA 224 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHH---H-HcCCCC---------CCcccCCHH
Confidence 3467999999998889999999999999999998 8888854433221111 1 111000 111122345
Q ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 658 MINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 658 l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
+.+++.+|++.+|++||++.++.++|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 889999999999999999999999886
No 87
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.4e-38 Score=325.24 Aligned_cols=254 Identities=29% Similarity=0.452 Sum_probs=205.4
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.++|...+.||+|+||.||+|...++..||+|.+.... ...+.+.+|++++++++||||+++++++. +...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 35688999999999999999997777789999997532 34467899999999999999999999875 45689999999
Q ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||.++.........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999999999753 346899999999999999999999986 9999999999999999999999999998655433322
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||+..+..++.++||||||+++||+++ |+.||.......... .. ..... ...+.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~---~~-~~~~~---------~~~~~ 226 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD---QV-ERGYR---------MPCPP 226 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH---HH-hcCCC---------CCCcc
Confidence 233456778999999988899999999999999999999 788886543322211 01 11100 01122
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+.+..+.+++.+|++.+|++||++.++++.|+.+
T Consensus 227 ~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 227 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 3344588999999999999999999999999864
No 88
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-39 Score=332.85 Aligned_cols=261 Identities=28% Similarity=0.439 Sum_probs=212.9
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
....+.++||+|-||.|..+....+..||||.++... +....+|.+|+++|.+++|||||+++|+|..++.+++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 4456778999999999999999888999999998764 344588999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc-cCcc
Q 004400 495 ENNSLARALFEHRLK-LDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE-ENTH 572 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~-~~~~ 572 (756)
++|+|.+++.++... ..-....+|+.|||.||+||.+. ++|||||.+.|+|+|.++++||+|||++|-.-. +...
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999999999876433 35566788999999999999987 599999999999999999999999999995443 3333
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh--CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS--GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
...+.+-+++|||||.+.-++++.++|||+||+.+||+++ ...||.........+-...+.........+..
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~------ 768 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSR------ 768 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccC------
Confidence 4445667889999999999999999999999999999875 77888655444444433333333322222221
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
++.++..+.+++.+||..|-++||+++++...|.+
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 22233458899999999999999999999988864
No 89
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.7e-39 Score=345.60 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=204.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 3688899999999999999995 478999999987532 234467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC-
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN- 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~- 570 (756)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999765 57899999999999999999999986 9999999999999999999999999998654432
Q ss_pred ---------------------------cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh
Q 004400 571 ---------------------------THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF 623 (756)
Q Consensus 571 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~ 623 (756)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 11223456999999999999999999999999999999999999999766533
Q ss_pred hHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHHH
Q 004400 624 YLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPS-MSSVLRM 682 (756)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-~~ev~~~ 682 (756)
.... . +.......... ....+ ...+.+++.+|+. +|.+||+ +.++++.
T Consensus 237 ~~~~--~-i~~~~~~~~~p---~~~~~----~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 ETYN--K-IINWKESLRFP---PDPPV----SPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHH--H-HhccCCcccCC---CCCCC----CHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 2211 1 11100000110 01112 3348889999997 9999999 9999874
No 90
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.8e-38 Score=340.25 Aligned_cols=261 Identities=22% Similarity=0.376 Sum_probs=197.7
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC-----CeEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG-----NQLL 488 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 488 (756)
+|+..+.||+|+||.||+|+ ..+++.||||.+... .......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 47788999999999999999 457899999998643 223345688999999999999999999998643 3589
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+||||+. ++|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 6898888654 36899999999999999999999997 99999999999999999999999999985432
Q ss_pred cCc--ceeeccccCccCCchHhhhc--CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC--------
Q 004400 569 ENT--HISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG-------- 636 (756)
Q Consensus 569 ~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-------- 636 (756)
... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||...+...............
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i 235 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRV 235 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 221 11234579999999999876 678999999999999999999999997655433222111110000
Q ss_pred ---c---cccccccCCCCCCC---HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 637 ---K---LMELVDTNPGSNFD---KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 637 ---~---~~~~~~~~~~~~~~---~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
. ....+.......+. +.....+.+++.+||+.+|++||+++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 236 RNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 00000000000000 0112347899999999999999999999864
No 91
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.7e-38 Score=328.85 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=202.9
Q ss_pred cCccccCcccCCCCccEEEeec-cCCc----EEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGT----AIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
++|...+.||+|+||.||+|.+ .+++ .|++|.+..... ....++..|+.++++++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 4778889999999999999985 3454 477787754322 23356778888999999999999999875 456789
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|+||+++|+|.+++......+++..+..++.||+.||+|||+.+ ++||||||+||++++++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999999877778999999999999999999999986 999999999999999999999999999865433
Q ss_pred Ccc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 570 NTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 570 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
... ......++..|+|||.+.++.++.++|||||||++||+++ |+.||.........+.. ..+......
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~~----- 233 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL----EKGERLAQP----- 233 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----HCCCcCCCC-----
Confidence 222 2234557789999999998899999999999999999998 99999665443332221 222211110
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 687 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 687 (756)
...+ ..+.+++.+||..+|.+||++.|+++.|+.+.
T Consensus 234 ~~~~----~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 234 QICT----IDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred CCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1112 23678899999999999999999999988654
No 92
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.4e-38 Score=345.88 Aligned_cols=255 Identities=18% Similarity=0.249 Sum_probs=204.3
Q ss_pred HhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
...++|+..+.||+|+||.||+|+. .+++.||+|.+... .......+.+|+.+++.++||||+++++++.+++..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3567899999999999999999994 57889999998643 2223355788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 120 lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999988653 5788899999999999999999986 99999999999999999999999999986544
Q ss_pred cCcceeeccccCccCCchHhhhcC----CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccccc
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRG----HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (756)
..........||+.|+|||++.+. .++.++|||||||++|||++|+.||...+....... +..........+
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~---i~~~~~~~~~~~- 270 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMDHKNSLTFPD- 270 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHH---HHcCCCcCCCCC-
Confidence 333233446799999999998653 478999999999999999999999977654332211 111111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTI--RPSMSSVLRM 682 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~ev~~~ 682 (756)
... ....+.+++.+|++.+|.+ ||++.|+++.
T Consensus 271 --~~~----~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 271 --DIE----ISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --cCC----CCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 011 2334888999999999988 9999999765
No 93
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.1e-38 Score=338.58 Aligned_cols=242 Identities=27% Similarity=0.382 Sum_probs=195.7
Q ss_pred CcccCCCCccEEEeec----cCCcEEEEEEccccC----cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 422 NNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKS----KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+.||+|+||.||+++. .+++.||+|.++... ......+.+|+++++.++||||++++++|.+++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999984 357899999986531 22335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++|+|.+++... ..+.+..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....... .
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (323)
T cd05584 82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT-V 156 (323)
T ss_pred CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-c
Confidence 9999999998654 36788899999999999999999986 99999999999999999999999999874332222 2
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+....... ... +. .. .+..
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~---~~~-~~-~~---------~~~~ 222 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK---ILK-GK-LN---------LPPY 222 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH---HHc-CC-CC---------CCCC
Confidence 2345799999999999988899999999999999999999999976554322211 111 11 01 1111
Q ss_pred HHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
....+.+++.+|++.+|++|| ++.++++.
T Consensus 223 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 223 LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 223488999999999999999 78887663
No 94
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-38 Score=343.21 Aligned_cols=256 Identities=22% Similarity=0.284 Sum_probs=197.8
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
.++|...+.||+|+||.||+|. ..+++.||+|.... ..+.+|++++++++|||||+++++|..+...++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 4679999999999999999999 46789999997532 3567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+. ++|..++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.........
T Consensus 165 ~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 239 (391)
T PHA03212 165 YK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK 239 (391)
T ss_pred CC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence 95 6888888654 46899999999999999999999986 9999999999999999999999999997543322223
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhh-----HHHHHHHHHhcCcc----------
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY-----LLDWALVLKEQGKL---------- 638 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~---------- 638 (756)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...........+..
T Consensus 240 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~ 319 (391)
T PHA03212 240 YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQA 319 (391)
T ss_pred cccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhH
Confidence 344679999999999998899999999999999999999998875432110 00000000000000
Q ss_pred --c-------cccccCCCCC--C--CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 639 --M-------ELVDTNPGSN--F--DKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 639 --~-------~~~~~~~~~~--~--~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
. ......+... + .......+.+++.+|++.||++|||+.|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 320 NLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 0000000000 0 0122446889999999999999999999985
No 95
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-38 Score=343.54 Aligned_cols=257 Identities=19% Similarity=0.288 Sum_probs=202.7
Q ss_pred HHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004400 411 IKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 411 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 486 (756)
+....++|+..+.||+|+||.||+|+. .+++.||+|.+.+. .......+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 344567899999999999999999995 46889999998642 22234567889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
.++||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceec
Confidence 99999999999999998643 5889999999999999999999986 999999999999999999999999999865
Q ss_pred cccCcceeeccccCccCCchHhhhcC----CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccc
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMRG----HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV 642 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (756)
............||+.|+|||++.+. .++.++||||+||++|||++|+.||...+...... . ...........
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~--~-i~~~~~~~~~p 269 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYS--K-IMDHKNSLNFP 269 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHH--H-HHhCCcccCCC
Confidence 44333233456799999999999764 37889999999999999999999997665433221 1 11111111111
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 004400 643 DTNPGSNFDKEQVMVMINVALLCANASPTI--RPSMSSVLRM 682 (756)
Q Consensus 643 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~ev~~~ 682 (756)
. .......+.+++..|+..++.+ ||++.|+++.
T Consensus 270 ~-------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 270 E-------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred C-------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0 0112334778888899755543 8899999875
No 96
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.9e-38 Score=324.08 Aligned_cols=253 Identities=31% Similarity=0.484 Sum_probs=206.6
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.++|...+.||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++|+||+++++++. ++..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 35788889999999999999998889999999987543 34568899999999999999999999874 56789999999
Q ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
.+|+|.+++.. ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence 99999999874 3457899999999999999999999986 9999999999999999999999999998655333222
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||++....++.++||||||+++||+++ |+.||...+........ . ....... ....
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~-~~~~~~~-----~~~~-- 228 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL---E-RGYRMPR-----PDNC-- 228 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHH---H-cCCCCCC-----CCCC--
Confidence 233456788999999988889999999999999999999 99999665543332211 1 1111111 1112
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
...+.+++.+|++.+|++||+++++++.|+.
T Consensus 229 --~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 229 --PEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2348999999999999999999999999874
No 97
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=315.95 Aligned_cols=272 Identities=24% Similarity=0.354 Sum_probs=208.3
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEe-----CCe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE-----GNQ 486 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 486 (756)
...|...+.||+|+||.|..|. ..+|..||||++... .....++..+|+..|+.++|+||+.+++.+.. -..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 4456667899999999999999 568899999999743 44456788999999999999999999999875 357
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
+|+|+|+| +.+|...++.. ..++...+..++.|+++||+|+|+.+ |+|||+||+|++++.+..+||+|||+|+..
T Consensus 101 vYiV~elM-etDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeec
Confidence 89999999 55888888644 46999999999999999999999986 999999999999999999999999999977
Q ss_pred cccC-cceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc---------
Q 004400 567 EEEN-THISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ--------- 635 (756)
Q Consensus 567 ~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~--------- 635 (756)
.... ....+..+-|.+|.|||++.. ..|+.+.||||.|||+.||++|+.-|.+.+......-.......
T Consensus 176 ~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i 255 (359)
T KOG0660|consen 176 DKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKI 255 (359)
T ss_pred cccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHh
Confidence 5431 112345678999999999875 57999999999999999999999999777654433221111110
Q ss_pred --Ccccccc---ccCCCCCC---CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--hccCccccc
Q 004400 636 --GKLMELV---DTNPGSNF---DKEQVMVMINVALLCANASPTIRPSMSSVLRM--LECGVDVLD 691 (756)
Q Consensus 636 --~~~~~~~---~~~~~~~~---~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~--L~~~~~~~~ 691 (756)
......+ ...+...+ -+......++++.+++..||.+|+|++|.++. |+.+-+..+
T Consensus 256 ~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d 321 (359)
T KOG0660|consen 256 RSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED 321 (359)
T ss_pred ccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence 0000011 11111111 11222357899999999999999999999864 555544443
No 98
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-38 Score=348.49 Aligned_cols=260 Identities=22% Similarity=0.284 Sum_probs=211.7
Q ss_pred hhcCccccCcccCCCCccEEEeeccCC-cEEEEEEccccCcccHHHHHHHHHHHHhCC-CCceeeEeeEE-Ee------C
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLADG-TAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCC-IE------G 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~-~~------~ 484 (756)
...++++.+.|.+|||+.||.|....+ ..||+|++-.......+...+|+++|++|+ |+|||.+++.. .. .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 455677889999999999999996555 999999998777777888999999999996 99999999942 21 2
Q ss_pred CeEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcc
Q 004400 485 NQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 563 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla 563 (756)
.+++|.||||.||.|-|++... ...|++.++++|+.++++|+++||.. .++|||||||-+||||+.++..||||||.|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 4689999999999999999732 33599999999999999999999998 578999999999999999999999999999
Q ss_pred ccCcccCcce--------eeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHH
Q 004400 564 KLDEEENTHI--------STRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVL 632 (756)
Q Consensus 564 ~~~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 632 (756)
.-.-...... .-...-|+.|+|||++. +..+++|+|||+|||+||-|+....||......
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------- 264 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------- 264 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------
Confidence 7332211110 01134689999999984 567999999999999999999999999655322
Q ss_pred HhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004400 633 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 690 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 690 (756)
.+++........+.+...|.+||..|++.+|.+||++-||+..+-.++...
T Consensus 265 -------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 265 -------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 233333322223456778999999999999999999999998887766544
No 99
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.6e-38 Score=345.59 Aligned_cols=252 Identities=22% Similarity=0.306 Sum_probs=200.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4788899999999999999994 578999999996531 233456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999999997544 6899999999999999999999997 99999999999999999999999999875422110
Q ss_pred c-------------------------------------eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCC
Q 004400 572 H-------------------------------------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGR 614 (756)
Q Consensus 572 ~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~ 614 (756)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0 011246999999999999989999999999999999999999
Q ss_pred CCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC---HHHHHHH
Q 004400 615 SNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPS---MSSVLRM 682 (756)
Q Consensus 615 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt---~~ev~~~ 682 (756)
.||...+........ ........... ...++ ..+.+++.+|+. +|.+|++ +.|+++.
T Consensus 237 ~Pf~~~~~~~~~~~i---~~~~~~~~~~~---~~~~s----~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 237 PPFCSDNPQETYRKI---INWKETLQFPD---EVPLS----PEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCHHHHHHHH---HcCCCccCCCC---CCCCC----HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999766543322211 11111111111 11122 347788889986 9999998 8888664
No 100
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.5e-38 Score=328.71 Aligned_cols=255 Identities=25% Similarity=0.442 Sum_probs=203.7
Q ss_pred hhcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 486 (756)
.+++|+..+.||+|+||.||+|... ++..||+|.+.... .....++.+|+.+++.++||||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999998743 35679999986432 2234568899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEE
Q 004400 487 LLLIYEYLENNSLARALFEHR---------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKI 557 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl 557 (756)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 999999999999999997432 23678899999999999999999986 999999999999999999999
Q ss_pred ccCCccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhc
Q 004400 558 SDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQ 635 (756)
Q Consensus 558 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 635 (756)
+|||+++........ ......+++.|+|||++.+..++.++|||||||++|||++ |..||............ ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~----~~ 236 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV----ME 236 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----Hc
Confidence 999999755432221 1122345788999999998889999999999999999999 68888655443322211 11
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 636 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
...... +......+.+++.+|++.+|++||++.|+++.|+
T Consensus 237 ~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 237 GGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCcCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111111 1112235889999999999999999999999886
No 101
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.2e-38 Score=338.69 Aligned_cols=257 Identities=26% Similarity=0.423 Sum_probs=202.0
Q ss_pred hcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEe-CC
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIE-GN 485 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 485 (756)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++.++ +|+||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357889999999999999999632 35789999987532 22345678899999999 89999999998865 46
Q ss_pred eEEEEEEecCCCCHHHHHHhcC----------------------------------------------------------
Q 004400 486 QLLLIYEYLENNSLARALFEHR---------------------------------------------------------- 507 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------------------- 507 (756)
..++||||+++|+|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 7899999999999999986421
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce-eeccccCccCC
Q 004400 508 --LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYM 584 (756)
Q Consensus 508 --~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~ 584 (756)
..++|..+.+++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 26799999999999999999999986 9999999999999999999999999998654332221 22345677899
Q ss_pred chHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHH
Q 004400 585 APEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVAL 663 (756)
Q Consensus 585 aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 663 (756)
|||++.+..++.++|||||||++|||++ |+.||......... .... ........ +......+.+++.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~--~~~~-~~~~~~~~---------~~~~~~~~~~l~~ 310 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEF--CRRL-KEGTRMRA---------PEYATPEIYSIML 310 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHH--HHHH-hccCCCCC---------CccCCHHHHHHHH
Confidence 9999999999999999999999999998 99998653322111 1111 11111111 1112235889999
Q ss_pred HhhcCCCCCCCCHHHHHHHhccC
Q 004400 664 LCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 664 ~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+||+.+|++||++.||++.|++.
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999864
No 102
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.8e-38 Score=341.94 Aligned_cols=248 Identities=26% Similarity=0.384 Sum_probs=193.4
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|+..+.||+|+||.||+|+. .+++.||||.+.... ......+.+|+++++.++|+||+++++++.+++..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4566778999999999999994 578999999986542 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++|+|.+. ...++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....... .
T Consensus 154 ~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~ 224 (353)
T PLN00034 154 MDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-P 224 (353)
T ss_pred CCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc-c
Confidence 999998643 24567788899999999999999986 99999999999999999999999999986543221 1
Q ss_pred eeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 574 STRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.....||..|+|||++.. ...+.++|||||||++|||++|+.||...... +|.......... . ..
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~~~~~~~~~~-~--~~---- 294 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG---DWASLMCAICMS-Q--PP---- 294 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc---cHHHHHHHHhcc-C--CC----
Confidence 233579999999998743 23456899999999999999999999633221 121111110000 0 00
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.........+.+++.+||+.||++||++.|+++.
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111223348899999999999999999999874
No 103
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.3e-38 Score=333.68 Aligned_cols=238 Identities=27% Similarity=0.380 Sum_probs=191.2
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|.. .+++.||+|.++... ....+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 568899999987532 22334556677777654 899999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~ 155 (316)
T cd05592 81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAST 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccc
Confidence 9999998654 37899999999999999999999986 9999999999999999999999999997543222 22334
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+....... ... .. . .++.....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~---i~~--~~-----~----~~~~~~~~ 221 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS---ILN--DR-----P----HFPRWISK 221 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH---HHc--CC-----C----CCCCCCCH
Confidence 6799999999999988899999999999999999999999976654332221 111 00 0 01111223
Q ss_pred HHHHHHHHhhcCCCCCCCCHHH
Q 004400 657 VMINVALLCANASPTIRPSMSS 678 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~e 678 (756)
.+.+++.+||+.+|++||++.+
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChH
Confidence 4788999999999999999764
No 104
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5.1e-38 Score=329.34 Aligned_cols=264 Identities=29% Similarity=0.388 Sum_probs=200.8
Q ss_pred ccccCcccCCCCccEEEee-----ccCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEE
Q 004400 418 FATDNNIGEGGFGPVYKGL-----LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLL 489 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 489 (756)
|...+.||+|+||+||.+. ..+++.||+|.+.... ......+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 3778999999999998764 2467899999987543 23456788999999999999999999998763 46899
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 86 v~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred EecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 99999999999998654 5899999999999999999999986 999999999999999999999999999865433
Q ss_pred Ccce--eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccch--hhHHHHHHHHHhcCccccccccC
Q 004400 570 NTHI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM--FYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 570 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
.... .....++..|+|||.+....++.++||||||+++|||++|+.|+..... .....+...........+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG 240 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC
Confidence 2211 1223456679999999888899999999999999999999999843221 11111100000000111111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.....+......+.+++.+||+.+|++||+++++++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 241 MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 11111222334588999999999999999999999999864
No 105
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.3e-38 Score=329.21 Aligned_cols=254 Identities=29% Similarity=0.424 Sum_probs=203.0
Q ss_pred CccccCcccCCCCccEEEeecc------CCcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
+|...+.||+|+||.||+|... +++.||+|.+...... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4667789999999999999853 3578999999754332 23568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC
Q 004400 490 IYEYLENNSLARALFEH---------------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 554 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~ 554 (756)
++||+.+++|.+++... ...+++..+.+++.|++.||+|||+.| |+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 99999999999998522 234788999999999999999999987 999999999999999999
Q ss_pred EEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHH
Q 004400 555 SKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVL 632 (756)
Q Consensus 555 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 632 (756)
+||+|||+++....... .......+++.|+|||.+..+.++.++|||||||++|||++ |..||........... .
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~---i 239 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM---I 239 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---H
Confidence 99999999886543222 11223456789999999988889999999999999999998 8888865544332221 1
Q ss_pred HhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 633 KEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
....... .+......+.+++.+||+.+|.+||++.+|++.|+.|
T Consensus 240 -~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 283 (283)
T cd05091 240 -RNRQVLP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW 283 (283)
T ss_pred -HcCCcCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence 1111111 1112234488999999999999999999999999854
No 106
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-37 Score=323.46 Aligned_cols=256 Identities=28% Similarity=0.479 Sum_probs=206.3
Q ss_pred hcCccccCcccCCCCccEEEeecc-CC---cEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DG---TAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
.++|+..+.||+|+||.||+|+.. ++ ..+|+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 357888899999999999999854 33 379999986542 3335678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||+++++|.+++......+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999999876668999999999999999999999986 999999999999999999999999999865433
Q ss_pred Ccceee--ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 570 NTHIST--RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 570 ~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
...... ....+..|+|||++....++.++|||||||++||+++ |+.||.......... ........ +
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~---~i~~~~~~-------~ 230 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMK---AINDGFRL-------P 230 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH---HHhcCCCC-------C
Confidence 222111 1223567999999998889999999999999999997 999996554332221 11111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
........+.+++.+||+.+|++||++.+|++.|+++
T Consensus 231 ---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 ---APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0111233588999999999999999999999999854
No 107
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.4e-37 Score=321.02 Aligned_cols=247 Identities=26% Similarity=0.411 Sum_probs=197.2
Q ss_pred cccCCCCccEEEeecc---CCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCC
Q 004400 423 NIGEGGFGPVYKGLLA---DGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNS 498 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 498 (756)
.||+|+||.||+|.+. ++..||+|.+..... ...+.+.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999753 456799999876532 23466899999999999999999999885 457899999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee--c
Q 004400 499 LARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST--R 576 (756)
Q Consensus 499 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~--~ 576 (756)
|.+++......+++..+.+++.|++.||+|||++| ++||||||+||+++.++.+||+|||+++........... .
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99999866668999999999999999999999986 999999999999999999999999999865433222111 1
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
..++..|+|||.+....++.++|||||||++||+++ |+.||........... . ..+.... .+....
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~---~-~~~~~~~---------~~~~~~ 224 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSF---I-EQGKRLD---------CPAECP 224 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH---H-HCCCCCC---------CCCCCC
Confidence 233578999999988889999999999999999996 9999965543332211 1 1111111 111223
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 656 MVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
..+.+++.+||..+|++||++.+|.+.|+.+
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 4588999999999999999999999998853
No 108
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-37 Score=321.42 Aligned_cols=252 Identities=30% Similarity=0.464 Sum_probs=203.8
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
++|.....||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|||++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4578889999999999999998777789999886532 34467899999999999999999999875 456899999999
Q ss_pred CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 496 NNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 496 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
+|+|.+++... ...+++..+..++.|++.||+|||+.| ++||||||+||++++++.++|+|||+++..........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 99999999753 345899999999999999999999986 99999999999999999999999999976543322222
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
....++..|+|||...+..++.++||||||+++|||++ |+.||..........+. .. .... ..+..
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~---~~-~~~~---------~~~~~ 227 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV---ER-GYRM---------PCPQG 227 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc-CCCC---------CCCcc
Confidence 23346778999999988889999999999999999999 89998665433322221 11 1100 11112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
.+..+.+++.+||+.+|++||++++|++.|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 33458899999999999999999999999874
No 109
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5e-38 Score=336.03 Aligned_cols=242 Identities=25% Similarity=0.316 Sum_probs=196.3
Q ss_pred CcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 422 NNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.||+|+||.||+|. ..+++.||+|.+... .......+..|+++++.++||||+++++++.+++..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999998 457899999998753 2233456788999999999999999999999999999999999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 498 SLARALFEHRLKLDWPTRRRICLGIARGLAYLHG-ESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 498 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
+|.+++... ..+++..+..++.||+.||+|||+ .| |+||||||+|||++.++.+||+|||+++....... ....
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~ 155 (325)
T cd05594 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKT 155 (325)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-cccc
Confidence 999888654 478999999999999999999997 55 99999999999999999999999999875332221 1234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. .. .. ....++ .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i---~~-~~-~~-----~p~~~~----~ 221 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---LM-EE-IR-----FPRTLS----P 221 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH---hc-CC-CC-----CCCCCC----H
Confidence 57999999999999989999999999999999999999999765543322211 00 00 00 111222 3
Q ss_pred HHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 657 VMINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
.+.+++.+|++.||++|+ ++.++++.
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 488999999999999996 89998754
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=8.3e-38 Score=328.02 Aligned_cols=251 Identities=24% Similarity=0.315 Sum_probs=200.7
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.|+..+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 367788999999999999994 578999999986532 2223457889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 493 YLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 493 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
|+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 99999999988653 346899999999999999999999987 99999999999999999999999999986543222
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
.....|+..|+|||++.+..++.++||||+||++||+++|+.||................... ...++
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~~~ 225 (285)
T cd05605 158 --IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED----------QEEYS 225 (285)
T ss_pred --cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc----------ccccC
Confidence 123468999999999998889999999999999999999999997654322211111110000 01112
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
......+.+++.+||+.||.+|| ++.++++.
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 226 EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 22334588999999999999999 67776543
No 111
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.4e-38 Score=330.90 Aligned_cols=260 Identities=26% Similarity=0.423 Sum_probs=207.7
Q ss_pred HHhhcCccccCcccCCCCccEEEeecc------CCcEEEEEEcccc-CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEe
Q 004400 412 KAATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIE 483 (756)
Q Consensus 412 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 483 (756)
+...++|+..+.||+|+||.||+|... ....+|+|.+... .......+.+|+++++++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 345567889999999999999999853 2368999998753 223345688999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceE
Q 004400 484 GNQLLLIYEYLENNSLARALFEH---------------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVL 548 (756)
Q Consensus 484 ~~~~~lV~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nil 548 (756)
++..++||||+++|+|.+++... ...+++..+++++.|++.||+|||+.+ |+||||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEE
Confidence 99999999999999999998632 346899999999999999999999886 999999999999
Q ss_pred ecCCCCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHH
Q 004400 549 LDKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLL 626 (756)
Q Consensus 549 l~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~ 626 (756)
++.++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++||+++ |..||.........
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 244 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 244 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH
Confidence 9999999999999998655432211 222345678999999988899999999999999999998 99998655433322
Q ss_pred HHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004400 627 DWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 687 (756)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 687 (756)
... ....... .+......+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus 245 ~~~----~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 KLL----KEGYRME---------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHH----HcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 211 1111111 11122335889999999999999999999999998653
No 112
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.4e-38 Score=344.51 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=197.3
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
+|+..+.||+|+||.||+|+ ..+++.||||.+.... ......+.+|++++++++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 68889999999999999999 4568999999986532 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc---
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE--- 569 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~--- 569 (756)
|+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|..+...
T Consensus 82 ~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 82 YIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 99999999999754 36889999999999999999999987 999999999999999999999999997532100
Q ss_pred ---------------------------------------CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHH
Q 004400 570 ---------------------------------------NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEI 610 (756)
Q Consensus 570 ---------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~el 610 (756)
.........||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 00001235799999999999998999999999999999999
Q ss_pred HhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCC---CHHHHHHH
Q 004400 611 VSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRP---SMSSVLRM 682 (756)
Q Consensus 611 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP---t~~ev~~~ 682 (756)
++|+.||...+....... .......... ......+. .+.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 238 l~G~~Pf~~~~~~~~~~~---i~~~~~~~~~---~~~~~~s~----~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQLK---VINWETTLHI---PSQAKLSR----EASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHHH---HhccCccccC---CCCCCCCH----HHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999976654322111 1110000011 11112233 3667777766 4999999 88888755
No 113
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.8e-38 Score=344.13 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=198.2
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 368888999999999999998 5578999999986532 223456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.| |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 999999999999754 46899999999999999999999997 99999999999999999999999999963221000
Q ss_pred c----------------------------------------------eeeccccCccCCchHhhhcCCCCcccchhhHHH
Q 004400 572 H----------------------------------------------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGI 605 (756)
Q Consensus 572 ~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv 605 (756)
. .....+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 001246999999999999989999999999999
Q ss_pred HHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCC---CCHHHHHHH
Q 004400 606 VALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIR---PSMSSVLRM 682 (756)
Q Consensus 606 ~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~R---Pt~~ev~~~ 682 (756)
++|||++|+.||........... ...........+ ....+ ..+.+++.+|+. +|.+| +++.|+++.
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~---i~~~~~~~~~p~---~~~~s----~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 237 IMFECLIGWPPFCSENSHETYRK---IINWRETLYFPD---DIHLS----VEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHH---HHccCCccCCCC---CCCCC----HHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999999999976554332211 111011111111 01122 347888999997 66665 599998765
No 114
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.1e-37 Score=325.82 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=203.3
Q ss_pred hhcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 486 (756)
.+++|...+.||+|+||.||+|... .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 4567899999999999999999864 35689999886543 3334578999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC---CEEE
Q 004400 487 LLLIYEYLENNSLARALFEHR------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---NSKI 557 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~---~~kl 557 (756)
.++||||+++|+|.+++.... ..+++..+.+++.||+.||+|||+.+ ++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 999999999999999997543 25899999999999999999999986 99999999999998754 5999
Q ss_pred ccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhc
Q 004400 558 SDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQ 635 (756)
Q Consensus 558 ~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 635 (756)
+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||........... ....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~---~~~~ 237 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF---VTGG 237 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HHcC
Confidence 9999998653322211 112234568999999999999999999999999999997 9999866544332221 1111
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 636 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.. . ..+...+..+.+++.+|++.+|++||++.+|++.|.
T Consensus 238 ~~-~---------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 238 GR-L---------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred Cc-C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11 1 111112345889999999999999999999999875
No 115
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1e-37 Score=327.20 Aligned_cols=264 Identities=28% Similarity=0.424 Sum_probs=203.2
Q ss_pred cCccccCcccCCCCccEEEeec-----cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-----ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE--GNQLL 488 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 488 (756)
.+|...+.||+|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999974 3578999999877665566789999999999999999999998754 34689
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+||||+++|+|.+++......+++..+..++.|++.||+|||+.| |+||||||+||++++++.+||+|||+++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 999999999999999766667999999999999999999999986 99999999999999999999999999986543
Q ss_pred cCcce--eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc-------cc
Q 004400 569 ENTHI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-------LM 639 (756)
Q Consensus 569 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 639 (756)
..... .....++..|+|||++.+..++.++|||||||++|||++|..|+...... +......... ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----FMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----hhhhcccccccccchHHHH
Confidence 32211 11223445699999998888999999999999999999987765322110 0000000000 00
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 640 ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+.+........+......+.+++.+||+.+|++|||+.||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000001111233588999999999999999999999999864
No 116
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.8e-38 Score=352.61 Aligned_cols=255 Identities=22% Similarity=0.323 Sum_probs=205.4
Q ss_pred HHhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC---
Q 004400 412 KAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN--- 485 (756)
Q Consensus 412 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 485 (756)
+...++|...+.||+|+||.||+|+ ..+|+.||||.+... .......+.+|+.++..++|+||+++++.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 3456799999999999999999998 567999999998654 2334456888999999999999999988775432
Q ss_pred -----eEEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEE
Q 004400 486 -----QLLLIYEYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKI 557 (756)
Q Consensus 486 -----~~~lV~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl 557 (756)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEE
Confidence 368999999999999998642 346899999999999999999999986 999999999999999999999
Q ss_pred ccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC
Q 004400 558 SDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 636 (756)
Q Consensus 558 ~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 636 (756)
+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+....... .. .+
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~---~~-~~ 260 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK---TL-AG 260 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---Hh-cC
Confidence 99999986543221 223446799999999999998999999999999999999999999976654332221 11 11
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 637 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... .+......+.+++.+||+.+|.+||++.++++.
T Consensus 261 ~~~~---------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 RYDP---------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 111223348899999999999999999999764
No 117
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.4e-37 Score=321.79 Aligned_cols=254 Identities=31% Similarity=0.498 Sum_probs=208.5
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.++|...+.||+|+||.||+|...+++.||||.+... ....+++.+|+.++++++|+||+++++++..+...++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 4678899999999999999999888889999998753 334567999999999999999999999999989999999999
Q ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++++|.+++.... ..+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||+|||.++.........
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA 160 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence 9999999997543 57899999999999999999999986 9999999999999999999999999998665432222
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||.+.+..++.++||||||+++||+++ |+.||...+........ .. .... . .+.
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~---~~-~~~~-----~----~~~ 227 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV---ER-GYRM-----P----RPP 227 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc-CCCC-----C----CCC
Confidence 222335678999999998889999999999999999998 99999655433322211 11 0000 0 011
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
..+..+.+++.+|++.+|++||+++++++.|+.
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 228 NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 113358899999999999999999999999874
No 118
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7.7e-38 Score=334.01 Aligned_cols=242 Identities=22% Similarity=0.354 Sum_probs=195.6
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+++.||+|.+... .......+..|.+++..+ +||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999985 46789999998753 223345677899998876 799999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++....... ....
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~~~ 155 (321)
T cd05591 81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV-TTTT 155 (321)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCCc-cccc
Confidence 9999988654 47899999999999999999999997 99999999999999999999999999875332222 2234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .... . . ..... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i---~~~~-~---~---~p~~~----~~ 221 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESI---LHDD-V---L---YPVWL----SK 221 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHH---HcCC-C---C---CCCCC----CH
Confidence 57999999999999889999999999999999999999999766554433211 1111 0 0 01112 23
Q ss_pred HHHHHHHHhhcCCCCCCC-------CHHHHHHH
Q 004400 657 VMINVALLCANASPTIRP-------SMSSVLRM 682 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RP-------t~~ev~~~ 682 (756)
.+.+++.+|++.||++|| ++.++++.
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 488999999999999999 67776543
No 119
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.6e-37 Score=325.13 Aligned_cols=254 Identities=28% Similarity=0.470 Sum_probs=204.9
Q ss_pred cCccccCcccCCCCccEEEeec------cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
++|...+.||+|+||.||+|.. .++..+|+|.+..........+.+|+++++.++|+||+++++++.+++..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4677789999999999999963 2466899999876666666789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCE
Q 004400 490 IYEYLENNSLARALFEHR--------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNS 555 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~ 555 (756)
||||+++|+|.+++.... ..+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 999999999999997543 25889999999999999999999986 9999999999999999999
Q ss_pred EEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHH
Q 004400 556 KISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLK 633 (756)
Q Consensus 556 kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 633 (756)
||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||............
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~---- 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI---- 237 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH----
Confidence 9999999975433221 11223345788999999998899999999999999999998 89998654433222111
Q ss_pred hcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 634 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
......... ...+ ..+.+++.+||+.||.+||++.+|++.|++
T Consensus 238 ~~~~~~~~~-----~~~~----~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 238 TQGRELERP-----RTCP----PEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HcCccCCCC-----CCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 111111111 1222 348899999999999999999999998863
No 120
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.2e-37 Score=327.87 Aligned_cols=255 Identities=32% Similarity=0.481 Sum_probs=203.7
Q ss_pred CccccCcccCCCCccEEEeecc------CCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
+|...+.||+|+||.||+|+.. ....+++|.+..... .....+.+|+.+++.++||||++++++|..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677899999999999999842 235789998865432 334678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCc
Q 004400 490 IYEYLENNSLARALFEHR-----------------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATN 546 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~N 546 (756)
|+||+.+|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999986421 34789999999999999999999986 9999999999
Q ss_pred eEecCCCCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhh
Q 004400 547 VLLDKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFY 624 (756)
Q Consensus 547 ill~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~ 624 (756)
|++++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999998654332221 222346778999999988889999999999999999998 999996655433
Q ss_pred HHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004400 625 LLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 687 (756)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 687 (756)
...+. ...... ...... ...+.+++.+||+.+|++||++.++++.|++..
T Consensus 238 ~~~~~----~~~~~~-----~~~~~~----~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 238 LFNLL----KTGYRM-----ERPENC----SEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHHH----hCCCCC-----CCCCCC----CHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 33221 111110 011122 234889999999999999999999999998653
No 121
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.9e-37 Score=322.08 Aligned_cols=257 Identities=23% Similarity=0.382 Sum_probs=206.7
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|+. .+++.||||.+... .......+.+|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5788999999999999999994 57899999987542 2233456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 492 EYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 492 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+++ ++||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988852 3345889999999999999999999986 99999999999999999999999999986543
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...+...... .....
T Consensus 159 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-~~~~~~~~~~-~~~~~-------- 227 (267)
T cd08228 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LFSLCQKIEQ-CDYPP-------- 227 (267)
T ss_pred hhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-HHHHHHHHhc-CCCCC--------
Confidence 3221 12346888999999999888999999999999999999999998554321 1122211111 11100
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.........+.+++.+||+.+|++||++.+|++.+++.
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 01112334588999999999999999999999998854
No 122
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7.2e-38 Score=333.83 Aligned_cols=237 Identities=24% Similarity=0.377 Sum_probs=192.8
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+++.||+|.+... .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 46889999998653 223345677888888876 699999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....... ....
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~-~~~~ 155 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK-TTST 155 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-cccc
Confidence 9999988655 47899999999999999999999986 99999999999999999999999999875322221 2234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. ... . ..... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i---~~-~~~-~-----~~~~~----~~ 221 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI---LN-DEV-V-----YPTWL----SQ 221 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH---hc-CCC-C-----CCCCC----CH
Confidence 57999999999999889999999999999999999999999766544333211 11 110 0 01112 23
Q ss_pred HHHHHHHHhhcCCCCCCCCHH
Q 004400 657 VMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~ 677 (756)
.+.+++.+|++.||++||++.
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCC
Confidence 478999999999999999983
No 123
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.3e-37 Score=326.58 Aligned_cols=261 Identities=26% Similarity=0.394 Sum_probs=206.0
Q ss_pred hcCccccCcccCCCCccEEEeeccC-----------------CcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceee
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLAD-----------------GTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVK 476 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 476 (756)
..+|+..+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578889999999999999987432 2468999987543 334567899999999999999999
Q ss_pred EeeEEEeCCeEEEEEEecCCCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCc
Q 004400 477 LYGCCIEGNQLLLIYEYLENNSLARALFEHR----------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATN 546 (756)
Q Consensus 477 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~N 546 (756)
++++|..++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999999999999999999999997543 26899999999999999999999986 9999999999
Q ss_pred eEecCCCCEEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh--CCCCCCccchh
Q 004400 547 VLLDKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS--GRSNVTKEDMF 623 (756)
Q Consensus 547 ill~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt--g~~p~~~~~~~ 623 (756)
|+++.++.++|+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999975433221 12233456789999999998889999999999999999998 67787554433
Q ss_pred hHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 624 YLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
..................... +...+..+.+++.+|++.+|++||++.||++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIYLPR------PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhccccccccccCCC------ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 333332222111111111111 1112245899999999999999999999999886
No 124
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.5e-37 Score=325.26 Aligned_cols=244 Identities=23% Similarity=0.311 Sum_probs=193.2
Q ss_pred ccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 424 IGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 424 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
||+|+||+||+|.. .+++.||+|.+..... ...+.+..|+++++.++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999984 5789999999865322 2235678899999999999999999999999999999999999999
Q ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 500 ARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 500 ~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 988753 3346899999999999999999999986 99999999999999999999999999976543322 1234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||............. . ..... ...++.....
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~---~-----~~~~~--~~~~~~~~~~ 226 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK---Q-----RILND--SVTYPDKFSP 226 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH---H-----hhccc--CCCCcccCCH
Confidence 578999999999999999999999999999999999999996543211110000 0 00000 0111222334
Q ss_pred HHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 004400 657 VMINVALLCANASPTIRP-----SMSSVLR 681 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RP-----t~~ev~~ 681 (756)
.+.+++.+|++.||++|| +++++++
T Consensus 227 ~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 227 ASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 588999999999999999 5566654
No 125
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.6e-37 Score=322.66 Aligned_cols=255 Identities=27% Similarity=0.446 Sum_probs=205.8
Q ss_pred cCccccCcccCCCCccEEEeecc----CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
.+|+..+.||+|+||.||+|... .+..+|+|.++... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999853 23479999986542 23346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+++++|.+++......+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999876667899999999999999999999986 9999999999999999999999999998665433
Q ss_pred cceee--ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 571 THIST--RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 571 ~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
..... ...++..|+|||++.+..++.++||||||+++||+++ |+.||..........+. .+ ..... ..
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~---~~-~~~~~-----~~ 231 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI---EE-GYRLP-----AP 231 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHH---hC-CCcCC-----CC
Confidence 22211 1233568999999998899999999999999999886 99999655433332221 11 11000 01
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.. .+..+.+++.+|++.+|.+||++.++++.|++.
T Consensus 232 ~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 232 MD----CPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CC----CCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11 223478999999999999999999999998853
No 126
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.9e-37 Score=320.11 Aligned_cols=245 Identities=27% Similarity=0.409 Sum_probs=197.0
Q ss_pred cccCCCCccEEEeec---cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 423 NIGEGGFGPVYKGLL---ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
.||+|+||.||+|.+ .++..+|+|+++.... ...+.+.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999964 3678999999865432 23467899999999999999999999885 45678999999999
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce--ee
Q 004400 498 SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI--ST 575 (756)
Q Consensus 498 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~--~~ 575 (756)
+|.+++... ..+++..+.+++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......... ..
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 999999654 46899999999999999999999986 9999999999999999999999999998654433221 12
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
...++..|+|||.+....++.++|||||||++|||++ |+.||........... . ..+..... ....+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~---i-~~~~~~~~-----~~~~~--- 224 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM---I-ESGERMEC-----PQRCP--- 224 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---H-HCCCCCCC-----CCCCC---
Confidence 2334678999999988889999999999999999998 9999966544333221 1 11111111 11222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 225 -~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 225 -PEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred -HHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 348899999999999999999999999985
No 127
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2e-37 Score=319.59 Aligned_cols=249 Identities=28% Similarity=0.426 Sum_probs=205.3
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|++|.||+|.. .+++.|++|.+... .......+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 467788999999999999995 57899999998643 334456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++++|.+++... ...+++..+..++.|++.||+|||+.| ++||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 9999999999764 457899999999999999999999986 999999999999999999999999998865543222
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....|++.|+|||+..+..++.++||||||+++|||++|+.||...+........ ..+.... .+.
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~---------~~~ 223 (256)
T cd08529 158 -ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI----IRGVFPP---------VSQ 223 (256)
T ss_pred -hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HcCCCCC---------Ccc
Confidence 23356889999999999988999999999999999999999999765533322211 1111111 111
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.....+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 223458899999999999999999999864
No 128
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2e-37 Score=326.90 Aligned_cols=261 Identities=24% Similarity=0.383 Sum_probs=202.0
Q ss_pred hcCccccCcccCCCCccEEEeeccC---------------CcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLAD---------------GTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLY 478 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 478 (756)
.++|...+.||+|+||.||+|+... ...||+|.++... ......|.+|++++++++|+||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578889999999999999987532 2358999987542 33345789999999999999999999
Q ss_pred eEEEeCCeEEEEEEecCCCCHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCce
Q 004400 479 GCCIEGNQLLLIYEYLENNSLARALFEHR-----------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNV 547 (756)
Q Consensus 479 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Ni 547 (756)
+++..++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence 99999999999999999999999986432 24688999999999999999999986 99999999999
Q ss_pred EecCCCCEEEccCCccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh--CCCCCCccchhh
Q 004400 548 LLDKDLNSKISDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS--GRSNVTKEDMFY 624 (756)
Q Consensus 548 ll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt--g~~p~~~~~~~~ 624 (756)
+++.++.+||+|||+++........ ......++..|+|||++..+.++.++|||||||++|||++ |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 9999999999999999754432211 1222345778999999998899999999999999999998 566775543333
Q ss_pred HHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 625 LLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.................... .... +..+.+++.+||+.+|++||++.+|++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~--~~~~----~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 VIENTGEFFRNQGRQIYLSQ--TPLC----PSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHhhhhccccccCCC--CCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 22221111111111111110 1112 235899999999999999999999999886
No 129
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.1e-37 Score=329.53 Aligned_cols=240 Identities=25% Similarity=0.378 Sum_probs=193.2
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+++.||||.++... ......+..|..++... +||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999995 467899999987542 23345567788888764 899999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....... ....
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 155 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-KTCT 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-ceee
Confidence 9999998654 47899999999999999999999986 99999999999999999999999999874322111 2234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+......... ... .. ++.....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~---~~~-------~~----~~~~~~~ 221 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR---MDN-------PC----YPRWLTR 221 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC-------CC----CCccCCH
Confidence 579999999999998899999999999999999999999997655433322211 000 00 1111223
Q ss_pred HHHHHHHHhhcCCCCCCCCHH-HHH
Q 004400 657 VMINVALLCANASPTIRPSMS-SVL 680 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~-ev~ 680 (756)
.+.+++.+|++.+|++||++. ++.
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHHH
Confidence 478899999999999999997 553
No 130
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.1e-37 Score=333.20 Aligned_cols=241 Identities=24% Similarity=0.344 Sum_probs=194.9
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCC-CceeeEeeEEEeCCeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQH-PNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~ 491 (756)
+|+..+.||+|+||.||+|.. .+++.||+|++... .....+.+..|.+++..++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 477889999999999999984 46789999998753 22344667889999999976 46888999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC
Confidence 999999999998654 36899999999999999999999986 99999999999999999999999999874322111
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+......... . .. . .++
T Consensus 157 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~---~-~~-~---------~~~ 221 (324)
T cd05587 157 -TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM---E-HN-V---------SYP 221 (324)
T ss_pred -ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH---c-CC-C---------CCC
Confidence 2234579999999999999899999999999999999999999997665433322111 1 00 0 011
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~ 676 (756)
......+.+++.+|++.+|.+|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1122347899999999999999986
No 131
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.2e-37 Score=318.21 Aligned_cols=251 Identities=28% Similarity=0.507 Sum_probs=205.4
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+.... .....|.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4677889999999999999998778899999986542 234678999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+++|.+++......+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||+++...........
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999999876667899999999999999999999986 999999999999999999999999998755433222222
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
...++.+|+|||.+.++.++.++||||||+++||+++ |+.||............ .. +. ....+ .. .
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~-~~--~~~~~---~~----~ 226 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI---NA-GF--RLYKP---RL----A 226 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH---hC-CC--CCCCC---CC----C
Confidence 2345678999999998889999999999999999998 99998655443322211 11 10 11111 11 1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
...+.+++.+||+.+|++||++.++++.|
T Consensus 227 ~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 227 SQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 24588999999999999999999999876
No 132
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=331.59 Aligned_cols=254 Identities=27% Similarity=0.440 Sum_probs=215.2
Q ss_pred cCccccCcccCCCCccEEEeeccC-CcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLAD-GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.+..-.++||-|-||.||.|+|+. .-.||||.++.+ ....++|..|+.+|+.++|||+|+++|+|..+..+|+|+|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence 345567899999999999999864 567999999754 456689999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
..|+|.++|++.. ..++.-..+.++.||+.|++||..+. +|||||..+|+|+.++..|||+|||+++++..+....
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA 422 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA 422 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence 9999999998654 34677778899999999999999884 9999999999999999999999999999887665544
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....-++.|.|||.+....++.|+|||+|||+|||+.| |..||.+-+... +..+.+.+.+++....++
T Consensus 423 HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq----VY~LLEkgyRM~~PeGCP------ 492 (1157)
T KOG4278|consen 423 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYGLLEKGYRMDGPEGCP------ 492 (1157)
T ss_pred ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH----HHHHHhccccccCCCCCC------
Confidence 433445779999999999999999999999999999998 889987665432 333445555555444433
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
..+.++++.||+.+|.+||++.|+.+.+|..
T Consensus 493 ---pkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 493 ---PKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred ---HHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 3589999999999999999999999998854
No 133
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-37 Score=334.16 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=199.5
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|+. .+++.||+|.+... .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688899999999999999994 56899999998642 2223456888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 999999999999766667999999999999999999999996 99999999999999999999999999876544333
Q ss_pred ceeeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 572 HISTRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||.......... ..........+...
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~---~i~~~~~~~~~~~~-- 232 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG---KIMNHKEHFQFPPD-- 232 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH---HHHcCCCcccCCCc--
Confidence 33334569999999999873 457889999999999999999999997654432221 11111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC--CCCCCCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANA--SPTIRPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~--~P~~RPt~~ev~~~ 682 (756)
....+ ..+.+++.+|+.. ++..||++.++++.
T Consensus 233 ~~~~~----~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 233 VTDVS----EEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred cCCCC----HHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 11122 3467777787654 33347899988765
No 134
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.1e-38 Score=342.60 Aligned_cols=250 Identities=20% Similarity=0.302 Sum_probs=194.6
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.|...+.||+|+||.||+|+ ..+++.||+|.+.... ......+.+|+.++++++|||||+++++|.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 57888999999999999999 4578899999986532 2234568889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC--
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN-- 570 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~-- 570 (756)
||++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 99999999998754 36889999999999999999999986 9999999999999999999999999975321000
Q ss_pred --------------------------------------------cceeeccccCccCCchHhhhcCCCCcccchhhHHHH
Q 004400 571 --------------------------------------------THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIV 606 (756)
Q Consensus 571 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~ 606 (756)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000123579999999999999899999999999999
Q ss_pred HHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC---HHHHHH
Q 004400 607 ALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPS---MSSVLR 681 (756)
Q Consensus 607 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt---~~ev~~ 681 (756)
+|||++|+.||...+....... .......... ......++ ...+++.++. .+|++|++ +.++++
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~---i~~~~~~~~~---p~~~~~s~----~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQMK---VINWQTSLHI---PPQAKLSP----EASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHHH---HHccCCCcCC---CCcccCCH----HHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 9999999999976554322111 1110000011 01112233 3566666654 59999997 777654
No 135
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=335.59 Aligned_cols=246 Identities=29% Similarity=0.402 Sum_probs=205.8
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHH
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLA 500 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 500 (756)
-+||+|.||+||-|+. .+...+|||.+..+.....+-+..|+..-+.++|.|||+++|.|.+++.+-+.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 3699999999999994 456789999998776666677899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-CCCEEEccCCccccCcccCcceeecc
Q 004400 501 RALFEHRLKL--DWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFGLAKLDEEENTHISTRV 577 (756)
Q Consensus 501 ~~l~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-~~~~kl~DFGla~~~~~~~~~~~~~~ 577 (756)
+.|.....++ .+.+.-.+..||++||.|||++. |||||||-+|||++. .|.+||+|||-++.... ....+.++
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TETF 736 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTETF 736 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhcc-CCcccccc
Confidence 9999877777 88899999999999999999985 999999999999964 68899999999986543 23345678
Q ss_pred ccCccCCchHhhhcC--CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 578 AGTIGYMAPEYAMRG--HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 578 ~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
.||..|||||++..+ .|+.++|||||||.+.||.||++||..-...... +.+- .+.... ...+.+..
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-----MFkV----GmyKvH--P~iPeels 805 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-----MFKV----GMYKVH--PPIPEELS 805 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-----hhhh----cceecC--CCCcHHHH
Confidence 899999999999875 4899999999999999999999999543322111 1111 111111 24567778
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 656 MVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.+...++.+|+..||.+||++.++++.
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccC
Confidence 889999999999999999999999753
No 136
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-37 Score=338.92 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=200.6
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-----eEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN-----QLL 488 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 488 (756)
+|+..+.||+|+||.||+|.. .+++.||||.+... .....+.+.+|+++++.++||||+++++++..++ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999994 57899999998653 2233467889999999999999999999998776 789
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+|+||+. ++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999997 5787777543 47899999999999999999999997 99999999999999999999999999986544
Q ss_pred cCcceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccc--------
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM-------- 639 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 639 (756)
..........+|..|+|||++.+. .++.++||||+||++|||++|+.||...+..................
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 333333345688999999998774 57999999999999999999999997665433222111110000000
Q ss_pred --cccccCCC--------CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 --ELVDTNPG--------SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 --~~~~~~~~--------~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+..... ..........+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 236 ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000 00111123458899999999999999999999864
No 137
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-37 Score=321.93 Aligned_cols=255 Identities=25% Similarity=0.364 Sum_probs=202.0
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
.++|+..+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35788999999999999999994 67889999998765444556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... .
T Consensus 88 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~ 162 (267)
T cd06646 88 CGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-K 162 (267)
T ss_pred CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeeccccc-c
Confidence 9999999998654 47899999999999999999999986 99999999999999999999999999986533221 1
Q ss_pred eeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 574 STRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.....|+..|+|||.+. ...++.++|||||||++|||++|+.||.......... .. .... ...... ..
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~---~~-~~~~---~~~~~~--~~ 233 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LM-SKSN---FQPPKL--KD 233 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe---ee-ecCC---CCCCCC--cc
Confidence 22346889999999985 3457889999999999999999999985433211100 00 0000 000000 00
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
.......+.+++.+||+.+|++||+++++++.+
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 234 KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 111234588999999999999999999998754
No 138
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7.8e-38 Score=339.86 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=203.8
Q ss_pred hHHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN 485 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 485 (756)
++....++|+..+.||+|+||.||+|+. .+++.||+|.+... .......+.+|+.+++.++||||+++++++.+++
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 4455668999999999999999999995 46889999998642 1223355788999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
..++||||+++|+|.+++... .++...+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 999999999999999998643 5788999999999999999999997 99999999999999999999999999986
Q ss_pred CcccCcceeeccccCccCCchHhhhcC----CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccc
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRG----HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMEL 641 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (756)
.............||+.|+|||++... .++.++|||||||++|||++|+.||...+...... .+.........
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~---~i~~~~~~~~~ 268 (371)
T cd05622 192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS---KIMNHKNSLTF 268 (371)
T ss_pred cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHH---HHHcCCCcccC
Confidence 554333333456799999999998753 37899999999999999999999997665433221 11111111111
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHHh
Q 004400 642 VDTNPGSNFDKEQVMVMINVALLCANASPTI--RPSMSSVLRML 683 (756)
Q Consensus 642 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~ev~~~L 683 (756)
.+. .. ....+.+++.+|+..++.+ ||++.|+++..
T Consensus 269 ~~~---~~----~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 269 PDD---ND----ISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCc---CC----CCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111 11 2334788899999844433 77899888754
No 139
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1e-37 Score=329.33 Aligned_cols=256 Identities=30% Similarity=0.448 Sum_probs=202.4
Q ss_pred cCccccCcccCCCCccEEEeecc-CCc--EEEEEEcccc-CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGT--AIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 490 (756)
++|...+.||+|+||.||+|... ++. .+++|.++.. .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57888999999999999999864 333 4788888643 233456789999999999 799999999999999999999
Q ss_pred EEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCE
Q 004400 491 YEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNS 555 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~ 555 (756)
+||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999997432 25889999999999999999999986 9999999999999999999
Q ss_pred EEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHh
Q 004400 556 KISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKE 634 (756)
Q Consensus 556 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 634 (756)
||+|||++........ ......+..|+|||++....++.++|||||||++|||++ |+.||........... ..
T Consensus 159 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~---~~- 232 (297)
T cd05089 159 KIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEK---LP- 232 (297)
T ss_pred EECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---Hh-
Confidence 9999999864322111 111223567999999988889999999999999999997 9999966544332221 11
Q ss_pred cCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCccc
Q 004400 635 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDV 689 (756)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 689 (756)
.+... .....+ ...+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus 233 ~~~~~-----~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 233 QGYRM-----EKPRNC----DDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred cCCCC-----CCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11110 011112 23488999999999999999999999999866543
No 140
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.2e-37 Score=333.02 Aligned_cols=244 Identities=24% Similarity=0.356 Sum_probs=194.1
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHH---HhCCCCceeeEeeEEEeCCeEEEE
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMI---SALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
|+..+.||+|+||.||+|.. .+++.||||.++... ....+.+.+|+.++ +.++||||+++++++.+++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56678999999999999984 578999999987532 22334566676654 566899999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+++|+|..++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 999999999988754 36899999999999999999999986 9999999999999999999999999987432222
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
. ......|++.|+|||.+.+..++.++|||||||++|||++|+.||...+....... .... .. ......
T Consensus 156 ~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~---i~~~-~~------~~p~~~ 224 (324)
T cd05589 156 D-RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDS---IVND-EV------RYPRFL 224 (324)
T ss_pred C-cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhC-CC------CCCCCC
Confidence 1 22346799999999999988999999999999999999999999976654333221 1111 00 011112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPS-----MSSVLR 681 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt-----~~ev~~ 681 (756)
...+.+++.+|++.||.+||+ +.++++
T Consensus 225 ----~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 225 ----SREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ----CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 234788999999999999994 555554
No 141
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.3e-37 Score=332.47 Aligned_cols=241 Identities=23% Similarity=0.341 Sum_probs=195.4
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 491 (756)
+|...+.||+|+||.||+|+. .+++.||+|.+.... ......+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 477889999999999999985 467899999987542 22334567788888877 5899999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.| |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCCC
Confidence 999999999988654 36899999999999999999999986 99999999999999999999999999975332221
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. ... .++
T Consensus 157 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i---~~-~~~----------~~p 221 (323)
T cd05616 157 -TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI---ME-HNV----------AYP 221 (323)
T ss_pred -ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-CCC----------CCC
Confidence 223467999999999999999999999999999999999999999766544333211 11 100 111
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~ 676 (756)
......+.+++.+|++.+|++|++.
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1223457899999999999999985
No 142
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-37 Score=333.29 Aligned_cols=255 Identities=20% Similarity=0.240 Sum_probs=200.1
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+++. .+++.||+|.+... .......+.+|..++..++|+||+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4788899999999999999994 46889999998642 1223345788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999999999875567899999999999999999999986 99999999999999999999999999986554433
Q ss_pred ceeeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 572 HISTRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
.......||+.|+|||++.+ +.++.++|||||||++|||++|+.||...+....... ............ .
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~---i~~~~~~~~~p~--~ 232 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHEERFQFPS--H 232 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHH---HHcCCCcccCCC--c
Confidence 33344679999999999875 4688899999999999999999999976554332211 111111111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTI--RPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~--RPt~~ev~~~ 682 (756)
.......+.+++.+|+..++++ |++++++++.
T Consensus 233 ----~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 233 ----ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ----cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0112335788888988865544 4578777654
No 143
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.9e-37 Score=328.56 Aligned_cols=240 Identities=25% Similarity=0.353 Sum_probs=193.1
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+|+.||+|.++... ......+..|..++... +||||+++++++.+++..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999995 468899999987532 23345567788888764 899999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 155 (316)
T cd05620 81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRAST 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cceec
Confidence 9999998654 46899999999999999999999986 9999999999999999999999999987432211 12344
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...+........ ... ........ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~---~~~-------~~~~~~~~----~~ 221 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI---RVD-------TPHYPRWI----TK 221 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---HhC-------CCCCCCCC----CH
Confidence 67999999999999999999999999999999999999999766543332211 100 00111112 23
Q ss_pred HHHHHHHHhhcCCCCCCCCHH-HHH
Q 004400 657 VMINVALLCANASPTIRPSMS-SVL 680 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~-ev~ 680 (756)
.+.+++.+|++.||++||++. ++.
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHH
Confidence 478999999999999999985 554
No 144
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.4e-37 Score=332.80 Aligned_cols=240 Identities=23% Similarity=0.323 Sum_probs=189.7
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+++.||+|.++... ......+.+|+.++.++ +||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999994 568899999987542 22335577898888877 899999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....... ....
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-~~~~ 155 (329)
T cd05618 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TTST 155 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-cccc
Confidence 9999888654 47899999999999999999999986 99999999999999999999999999975322211 2234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccch-----hhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM-----FYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....+.......... .++
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~p 225 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------RIP 225 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------CCC
Confidence 6799999999999999999999999999999999999999942111 1111111111111110 111
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~ 676 (756)
......+.+++.+|++.||++||+.
T Consensus 226 ~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 226 RSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 1223347899999999999999984
No 145
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=329.42 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=211.0
Q ss_pred hcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcc---cHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQ---GNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 489 (756)
...|+..+.||+|.||.||+++.+ +|+.+|+|.+.+.... ....+.+|+++|+++. |||||.++++|.+....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456778899999999999999954 5999999999776443 3458899999999998 9999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC----CCEEEccCCcccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD----LNSKISDFGLAKL 565 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~----~~~kl~DFGla~~ 565 (756)
|||++.||.|.+.+... .+++.++..++.|++.|++|||+.| |+|||+||+|+|+... +.+|++|||++..
T Consensus 114 vmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 99999999999999866 3999999999999999999999987 9999999999999643 4799999999998
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
... .......+||+.|+|||++....|+..+||||+||++|.|++|..||..+........ + ..++. -+..
T Consensus 189 ~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~---i-~~~~~--~f~~- 259 (382)
T KOG0032|consen 189 IKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLA---I-LRGDF--DFTS- 259 (382)
T ss_pred ccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHH---H-HcCCC--CCCC-
Confidence 766 3345668999999999999989999999999999999999999999988775443331 1 11111 1111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.....+.+++..++..||.+|+|+.++++.
T Consensus 260 ---~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 260 ---EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ---CCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1222334558899999999999999999999995
No 146
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.1e-37 Score=322.20 Aligned_cols=254 Identities=27% Similarity=0.468 Sum_probs=204.7
Q ss_pred CccccCcccCCCCccEEEeecc-CC---cEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-DG---TAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
+|+..+.||+|+||.||+|... ++ ..||||.+... .......|..|+.+++.++||||+++++++.++...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 5778899999999999999854 33 36999998754 3334568999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++......+++.+++.++.|++.||+|||+.| ++||||||+||+++.++.+||+|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999876667899999999999999999999986 99999999999999999999999999876543222
Q ss_pred ce--eeccc--cCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 572 HI--STRVA--GTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 572 ~~--~~~~~--gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
.. ..... .+..|+|||.+.+..++.++|||||||++||+++ |..||..........+.. ..... ..
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~---~~~~~------~~ 232 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE---QDYRL------PP 232 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH---cCCcC------CC
Confidence 11 11111 2457999999998899999999999999999886 999997655444333221 11000 01
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+.+.+..+.+++.+||+.+|.+||++.+|++.|++.
T Consensus 233 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 233 ----PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111233488999999999999999999999998854
No 147
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7.7e-37 Score=322.58 Aligned_cols=261 Identities=26% Similarity=0.409 Sum_probs=202.4
Q ss_pred hcCccccCcccCCCCccEEEeecc-----------------CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceee
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-----------------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVK 476 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 476 (756)
.++|+..+.||+|+||.||++... ++..||+|.+.... ......+.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356889999999999999998532 24478999987542 334467899999999999999999
Q ss_pred EeeEEEeCCeEEEEEEecCCCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCc
Q 004400 477 LYGCCIEGNQLLLIYEYLENNSLARALFEHR----------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATN 546 (756)
Q Consensus 477 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~N 546 (756)
+++++.+++..++||||+++|+|.+++.... ..+++.++.+++.|++.||+|||+.| ++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence 9999999999999999999999999997432 24778899999999999999999986 9999999999
Q ss_pred eEecCCCCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh--CCCCCCccchh
Q 004400 547 VLLDKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS--GRSNVTKEDMF 623 (756)
Q Consensus 547 ill~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt--g~~p~~~~~~~ 623 (756)
|+++.++.++|+|||+++......... .....++..|+|||....+.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 999999999999999998654332211 222345678999999988899999999999999999998 77888544333
Q ss_pred hHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 624 YLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
............... ....+.+ ... ...+.+++.+||+.||++||++.+|++.|+
T Consensus 241 ~~~~~~~~~~~~~~~-~~~~~~~-~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QVIENTGEFFRDQGR-QVYLPKP-ALC----PDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHHhhccc-cccCCCC-CCC----CHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 322211111111110 0111111 112 245889999999999999999999999886
No 148
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3e-37 Score=319.78 Aligned_cols=251 Identities=27% Similarity=0.363 Sum_probs=203.1
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc-----ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK-----QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
++|...+.||+|++|.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4788999999999999999984 5789999998864321 123568889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|+||+++++|.+++... ..+++..+.+++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++.....
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 99999999999998654 36889999999999999999999986 999999999999999999999999999765432
Q ss_pred Cccee--eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 570 NTHIS--TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 570 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
..... ....|+..|+|||.+.+..++.++||||+|+++||+++|+.||...+......+. .......
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~-------- 226 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI---ATQPTNP-------- 226 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH---hccCCCC--------
Confidence 22111 2356788999999999888999999999999999999999999655433222111 1111111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+......+.+++.+||..+|.+||++.++++.
T Consensus 227 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 227 -QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1111223348899999999999999999999875
No 149
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.3e-37 Score=322.09 Aligned_cols=244 Identities=26% Similarity=0.333 Sum_probs=193.0
Q ss_pred ccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 424 IGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 424 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
||+|+||.||+++. .+|+.||+|.+.... ......+..|++++++++||||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999984 568999999986432 12234566799999999999999999999999999999999999999
Q ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccc
Q 004400 500 ARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVA 578 (756)
Q Consensus 500 ~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 578 (756)
.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccC
Confidence 9888643 346899999999999999999999986 9999999999999999999999999997654322 123356
Q ss_pred cCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhcCccccccccCCCCCCCHHHHHH
Q 004400 579 GTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMV 657 (756)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (756)
|+..|+|||++.+..++.++||||+||++|||++|+.||...... ........... .. +.. ....+ ...
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~----~~~ 225 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE-DE----VKF-EHQNF----TEE 225 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc-cc----ccc-ccccC----CHH
Confidence 899999999999888999999999999999999999999643221 11111111100 00 000 01122 234
Q ss_pred HHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 658 MINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 658 l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+.+++.+|++.||++||++.|+++.
T Consensus 226 ~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 226 SKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHHHHhccCHhhCCCCccchhh
Confidence 8899999999999999999877643
No 150
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.9e-37 Score=330.43 Aligned_cols=242 Identities=24% Similarity=0.365 Sum_probs=195.8
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|.. .+++.||+|.++... ......+.+|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999985 467899999987542 23345677899999888 799999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....... ....
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 155 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV-TTST 155 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-cccc
Confidence 9999988654 37999999999999999999999986 99999999999999999999999999874322211 1234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+....... ... ... .++.....
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~---i~~-~~~----------~~~~~~~~ 221 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS---ILE-DEV----------RYPRWLSK 221 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH---HHc-CCC----------CCCCcCCH
Confidence 5789999999999999999999999999999999999999976554332221 111 100 01111233
Q ss_pred HHHHHHHHhhcCCCCCCCCH-----HHHHHH
Q 004400 657 VMINVALLCANASPTIRPSM-----SSVLRM 682 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~-----~ev~~~ 682 (756)
.+.+++.+||+.||.+||++ .++++.
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 48899999999999999999 777653
No 151
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.4e-37 Score=327.19 Aligned_cols=257 Identities=27% Similarity=0.420 Sum_probs=204.7
Q ss_pred hcCccccCcccCCCCccEEEeec------cCCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 486 (756)
.++|...+.||+|+||.||+|.. .++..||+|.++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 45788999999999999999973 235579999987543 23345788999999999 79999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 487 LLLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
.++||||+.+|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+|++|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999997543 34899999999999999999999986 99999999999999999999999999986
Q ss_pred CcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccc
Q 004400 566 DEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVD 643 (756)
Q Consensus 566 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (756)
....... ......++..|+|||.+....++.++|||||||++|||++ |+.||.......... . ....+....
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~--~-~~~~~~~~~--- 264 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFY--K-LIKEGYRMA--- 264 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHH--H-HHHcCCcCC---
Confidence 5433221 1222346788999999998899999999999999999998 999986543322110 0 111111100
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 644 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 644 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
..... ...+.+++.+|++.+|++||++.|+++.|++.
T Consensus 265 --~~~~~----~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 265 --QPEHA----PAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --CCCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 01111 23588999999999999999999999999853
No 152
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.9e-37 Score=331.32 Aligned_cols=237 Identities=27% Similarity=0.372 Sum_probs=189.9
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHH-HHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIG-MISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+|+.||+|++.... ......+..|.. +++.++||||+++++++.+++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999995 578999999986531 222344555555 56789999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 155 (323)
T cd05575 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KTTST 155 (323)
T ss_pred CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Ccccc
Confidence 9999998654 47899999999999999999999987 9999999999999999999999999987532221 12334
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+....... ... ... . ..... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~---i~~-~~~-~-----~~~~~----~~ 221 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDN---ILN-KPL-R-----LKPNI----SV 221 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHH---HHc-CCC-C-----CCCCC----CH
Confidence 5799999999999998999999999999999999999999976654332211 111 000 0 11112 33
Q ss_pred HHHHHHHHhhcCCCCCCCCHH
Q 004400 657 VMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~ 677 (756)
.+.+++.+|++.||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCC
Confidence 488999999999999999985
No 153
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-38 Score=298.30 Aligned_cols=260 Identities=23% Similarity=0.303 Sum_probs=206.3
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-----eE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGN-----QL 487 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 487 (756)
..++|.+.+.||+|||+-||.+. ..+++.||+|++.-.+.++.+..++|++.-++++|||+++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34678899999999999999999 7889999999997777777888999999999999999999999976544 48
Q ss_pred EEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 488 LLIYEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
|++++|...|+|.+.+.. .+..+++.++..|+.+|++||++||+.. ++.+||||||.|||+.+.+.++|.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 999999999999999973 3447899999999999999999999984 579999999999999999999999999987
Q ss_pred cCcccCcce--------eeccccCccCCchHhhhc---CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHH
Q 004400 565 LDEEENTHI--------STRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLK 633 (756)
Q Consensus 565 ~~~~~~~~~--------~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 633 (756)
...-..... ...-.-|..|.|||.+.- ...++++|||||||++|.|+.|..||...-.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------- 246 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------- 246 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-----------
Confidence 543211110 011235889999999853 4578999999999999999999999943211
Q ss_pred hcCcccc-ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 634 EQGKLME-LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
+.+.+.- +........-....+..+.+++++|++.||.+||++.+++..++.
T Consensus 247 ~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 247 QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 1111111 111111000011144569999999999999999999999988774
No 154
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.7e-37 Score=321.76 Aligned_cols=254 Identities=26% Similarity=0.452 Sum_probs=205.7
Q ss_pred hcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 487 (756)
.++|...+.||+|+||.||+|... .+..||+|.+.... ......+.+|+++++.++||||+++++++..+...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888899999999999999853 24689999986542 23345788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEc
Q 004400 488 LLIYEYLENNSLARALFEHR---------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKIS 558 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~ 558 (756)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 99999999999999996422 24788999999999999999999986 9999999999999999999999
Q ss_pred cCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcC
Q 004400 559 DFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQG 636 (756)
Q Consensus 559 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 636 (756)
|||+++....... .......++..|+|||.+..+.++.++|||||||++||+++ |+.||...+......+.. .+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~----~~ 237 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI----DG 237 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh----cC
Confidence 9999986543322 12233457889999999988889999999999999999998 899986555443333221 11
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 637 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
...... ..+ ...+.+++.+||+.+|++|||+.++++.|+
T Consensus 238 ~~~~~~-----~~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 GHLDLP-----ENC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCC-----CCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111 112 345889999999999999999999999887
No 155
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.9e-37 Score=320.64 Aligned_cols=251 Identities=26% Similarity=0.432 Sum_probs=197.3
Q ss_pred cccCcccCCCCccEEEeeccC-Cc--EEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------CeE
Q 004400 419 ATDNNIGEGGFGPVYKGLLAD-GT--AIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG------NQL 487 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 487 (756)
...+.||+|+||.||+|...+ +. .||+|.++.. .....+.+.+|+++++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456899999999999999654 33 6899988654 233456788999999999999999999987532 256
Q ss_pred EEEEEecCCCCHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCc
Q 004400 488 LLIYEYLENNSLARALFE-----HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGL 562 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGl 562 (756)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence 899999999999998852 2235899999999999999999999986 99999999999999999999999999
Q ss_pred cccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcccc
Q 004400 563 AKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLME 640 (756)
Q Consensus 563 a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (756)
++......... .....+++.|+|||...+..++.++||||||+++|||++ |+.||........... . ..+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~---~-~~~~~~~ 234 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY---L-RQGNRLK 234 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---H-HcCCCCC
Confidence 98654332211 122346778999999998899999999999999999999 7888865443332221 1 1111111
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 641 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 641 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
. ...+ ...+.+++.+||+.+|++||++.++++.|+.
T Consensus 235 ~-----~~~~----~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 235 Q-----PPDC----LDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred C-----CCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 0 1112 2348899999999999999999999999885
No 156
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.3e-37 Score=322.48 Aligned_cols=257 Identities=25% Similarity=0.439 Sum_probs=204.7
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCc----EEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGT----AIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
.++|+..+.||+|+||.||+|.+ .++. .||+|.+... .....+.+.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 35788889999999999999984 4454 4899998654 33345678899999999999999999999975 4578
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+++||+++|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999999876667999999999999999999999986 99999999999999999999999999986643
Q ss_pred cCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 569 ENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 569 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
..... .....++..|+|||...+..++.++|||||||++|||++ |..||..........+. ........
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~----- 232 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL----EKGERLPQ----- 232 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----HCCCcCCC-----
Confidence 32221 112335678999999998899999999999999999998 88998654433332221 11111110
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
...+ ...+.+++.+||+.||++||++.++++.|+....
T Consensus 233 ~~~~----~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 233 PPIC----TIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1112 2348899999999999999999999999876533
No 157
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.2e-37 Score=320.42 Aligned_cols=253 Identities=26% Similarity=0.447 Sum_probs=200.6
Q ss_pred ccccCcccCCCCccEEEeecc-C---CcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe-----
Q 004400 418 FATDNNIGEGGFGPVYKGLLA-D---GTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ----- 486 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 486 (756)
|...+.||+|+||.||+|... + +..||+|.++... ......+.+|++.++.++||||+++++++.+...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999999853 2 3679999987542 2334578999999999999999999999876554
Q ss_pred -EEEEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 487 -LLLIYEYLENNSLARALFEH-----RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 487 -~~lV~e~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
.++|+||+++|+|..++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 79999999999999998632 236899999999999999999999986 999999999999999999999999
Q ss_pred CccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcc
Q 004400 561 GLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKL 638 (756)
Q Consensus 561 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (756)
|+++......... .....++..|+|||++....++.++|||||||++|||++ |..||.........++. .. +..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~---~~-~~~ 233 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL---RH-GNR 233 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc-CCC
Confidence 9998654433221 122335678999999988889999999999999999999 88888655443333222 11 111
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 639 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.. .+......+.+++.+||+.||++||++.|+++.|+++
T Consensus 234 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 LK---------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC---------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1112233588999999999999999999999998854
No 158
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.1e-36 Score=316.87 Aligned_cols=251 Identities=27% Similarity=0.401 Sum_probs=192.6
Q ss_pred CcccCCCCccEEEeeccC---CcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 422 NNIGEGGFGPVYKGLLAD---GTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998543 45799998865432 23357889999999999999999999999999999999999999
Q ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 498 SLARALFEHR----LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 498 sL~~~l~~~~----~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+|.+++.... ...++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997432 24677888899999999999999986 9999999999999999999999999997543332211
Q ss_pred -eeccccCccCCchHhhhcC-------CCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcccccccc
Q 004400 574 -STRVAGTIGYMAPEYAMRG-------HLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 574 -~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (756)
.....|+..|+|||++... .++.++||||||+++|||++ |+.||............ . .........+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~--~--~~~~~~~~~~ 233 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYT--V--REQQLKLPKP 233 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHH--h--hcccCCCCCC
Confidence 2234578899999998642 35789999999999999996 99999654433322211 1 1111111122
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
...... ...+.+++..|| .+|++|||++||++.|+
T Consensus 234 ~~~~~~----~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 234 RLKLPL----SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ccCCCC----ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111112 223778889999 58999999999998875
No 159
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.3e-37 Score=320.24 Aligned_cols=257 Identities=25% Similarity=0.417 Sum_probs=206.7
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|. ..+++.||||.+.... .....++.+|+.+++.++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 467888999999999999999 4689999999876432 223457889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 492 EYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 492 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
||+++++|.+++.. ....+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998863 2446899999999999999999999986 99999999999999999999999999876543
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.... .....|+..|+|||.+.+..++.++||||||+++|+|++|..||...... ......... ....+..
T Consensus 159 ~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~------~~~~~~~-- 228 (267)
T cd08229 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIE------QCDYPPL-- 228 (267)
T ss_pred CCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhhhhh------cCCCCCC--
Confidence 3221 22346889999999998888999999999999999999999999644321 111111111 1111100
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
........+.+++.+||+.+|++|||+.+|++++++.
T Consensus 229 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 229 -PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred -CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 0112334588999999999999999999999998853
No 160
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.2e-37 Score=323.95 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=207.5
Q ss_pred hhcCccccCcccCCCCccEEEeeccC-----CcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEe-CCe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLAD-----GTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIE-GNQ 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 486 (756)
..++|...+.||+|+||.||+|...+ +..|++|.+... .......+.+|+.++++++|+||+++++++.+ +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35688899999999999999999665 788999988654 23335668899999999999999999999876 577
Q ss_pred EEEEEEecCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEcc
Q 004400 487 LLLIYEYLENNSLARALFEHR-------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISD 559 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~-------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~D 559 (756)
.++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 899999999999999997532 45899999999999999999999986 99999999999999999999999
Q ss_pred CCccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCc
Q 004400 560 FGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGK 637 (756)
Q Consensus 560 FGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 637 (756)
||+++........ ......++..|+|||++....++.++||||||+++||+++ |+.||...+......+. .....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~~~ 237 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL---KDGYR 237 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHH---HcCCC
Confidence 9999865433222 1223456778999999988889999999999999999999 99999765544433221 11111
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 638 LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
. . ....++ ..+.+++.+||+.+|++||++.++++.|+..
T Consensus 238 ~-~-----~~~~~~----~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 238 L-A-----QPINCP----DELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred C-C-----CCCcCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0 0 011122 3488999999999999999999999999854
No 161
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.7e-37 Score=327.09 Aligned_cols=261 Identities=22% Similarity=0.347 Sum_probs=201.0
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|...+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 5688899999999999999984 468899999986542 22335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++ +|.+++......+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++........
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 160 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT- 160 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCccc-
Confidence 985 888888766667899999999999999999999986 999999999999999999999999999754332221
Q ss_pred eeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC------------ccc-
Q 004400 574 STRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG------------KLM- 639 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------------~~~- 639 (756)
.....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...+............... ...
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 223467899999999865 468999999999999999999999997655433222111110000 000
Q ss_pred -cccccCCCC--CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 640 -ELVDTNPGS--NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 640 -~~~~~~~~~--~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
......+.. ...+.....+.+++.+|++.||.+|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000 000112335789999999999999999999976
No 162
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.2e-38 Score=334.97 Aligned_cols=238 Identities=25% Similarity=0.340 Sum_probs=194.0
Q ss_pred CcccCCCCccEEEeec----cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 422 NNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
+.||+|+||.||++.. .+|+.||+|++..... .....+.+|++++++++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3688999999875421 233457789999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... ...
T Consensus 82 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-~~~ 156 (318)
T cd05582 82 GGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KAY 156 (318)
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-cee
Confidence 99999998654 46899999999999999999999986 99999999999999999999999999976443322 223
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...+........ .. ... . .+....
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i---~~-~~~-~---------~p~~~~ 222 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI---LK-AKL-G---------MPQFLS 222 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH---Hc-CCC-C---------CCCCCC
Confidence 467999999999999888999999999999999999999999765543322211 11 100 0 111122
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHH
Q 004400 656 MVMINVALLCANASPTIRPSMSS 678 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~e 678 (756)
..+.+++.+||+.||++||++.+
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCC
Confidence 34789999999999999999655
No 163
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.9e-37 Score=324.69 Aligned_cols=251 Identities=27% Similarity=0.468 Sum_probs=205.5
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
..+|+..+.||+|+||.||+|. ..+++.||+|.+..........+.+|+.+++.++|+||++++++|..+...++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 3578889999999999999998 457899999998765555567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++... .+++.++..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~ 172 (296)
T cd06654 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (296)
T ss_pred cCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc-c
Confidence 9999999998643 5789999999999999999999987 99999999999999999999999999875433221 1
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+..... .. ..... ... ...+..
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~-~~~~~-~~~-------~~~~~~ 241 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YL-IATNG-TPE-------LQNPEK 241 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HH-HhcCC-CCC-------CCCccc
Confidence 22346889999999999888999999999999999999999999665432211 11 11100 000 011122
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.+++.+||..+|++||++.++++.
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred cCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 33458899999999999999999999874
No 164
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=314.57 Aligned_cols=252 Identities=23% Similarity=0.268 Sum_probs=205.3
Q ss_pred hcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
.+.|+..+.||+|.-|+||.++.. ++..+|+|++.+.. .....+...|.+||+.++||.++.+|..|+.+...|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 356778899999999999999965 46899999997752 33345677899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc-
Q 004400 491 YEYLENNSLARALF-EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE- 568 (756)
Q Consensus 491 ~e~~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~- 568 (756)
||||+||+|....+ +....+++..++.++..|+-||+|||-.| ||+|||||+||||-++|++.|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999999987 44667999999999999999999999998 99999999999999999999999998753210
Q ss_pred --------------------------------cCc----------------------ceeeccccCccCCchHhhhcCCC
Q 004400 569 --------------------------------ENT----------------------HISTRVAGTIGYMAPEYAMRGHL 594 (756)
Q Consensus 569 --------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~ 594 (756)
... ..+..++||-.|+|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 01223679999999999999999
Q ss_pred CcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCC
Q 004400 595 TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRP 674 (756)
Q Consensus 595 ~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP 674 (756)
+.++|+|+|||++|||+.|+.||.+.+....+. .++...+.-...+..+....+||++.+.+||++|-
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~------------NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl 380 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR------------NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL 380 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHH------------HHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence 999999999999999999999997766433221 11222221111223445689999999999999999
Q ss_pred C----HHHHHH
Q 004400 675 S----MSSVLR 681 (756)
Q Consensus 675 t----~~ev~~ 681 (756)
. +.||-+
T Consensus 381 g~~rGA~eIK~ 391 (459)
T KOG0610|consen 381 GSKRGAAEIKR 391 (459)
T ss_pred ccccchHHhhc
Confidence 8 777643
No 165
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.7e-37 Score=328.67 Aligned_cols=254 Identities=30% Similarity=0.445 Sum_probs=201.0
Q ss_pred hcCccccCcccCCCCccEEEeecc-CCc--EEEEEEcccc-CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DGT--AIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 489 (756)
.++|+..+.||+|+||.||+|... ++. .+|+|.+... .......+.+|++++.++ +||||+++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 457888899999999999999954 454 4677777643 233456788999999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC
Q 004400 490 IYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN 554 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~ 554 (756)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+.| |+||||||+|||++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence 999999999999997432 25789999999999999999999986 999999999999999999
Q ss_pred EEEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHH
Q 004400 555 SKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLK 633 (756)
Q Consensus 555 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 633 (756)
+||+|||+++...... ......++..|+|||++.+..++.++|||||||++|||+| |..||...+....... ..
T Consensus 163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~---~~ 237 (303)
T cd05088 163 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK---LP 237 (303)
T ss_pred EEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH---Hh
Confidence 9999999986422111 1111234668999999988889999999999999999998 9999965544332221 11
Q ss_pred hcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 634 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
. ..... ..... ...+.+++.+||+.+|++||++.++++.|+.+
T Consensus 238 ~-~~~~~-----~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 238 Q-GYRLE-----KPLNC----DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred c-CCcCC-----CCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1 00000 01112 23478999999999999999999999998854
No 166
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-39 Score=310.12 Aligned_cols=247 Identities=28% Similarity=0.420 Sum_probs=210.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
+-|++..+||+|+||.||+|.+ ..|..+|||.+... .+.+++..|+.++++.+.|++|++||.|.....+|+|||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 4577888999999999999995 57999999998653 45688999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
..|+..|.++.+++.+++.++..++...++||+|||.. +-||||||+.|||++.+|.+|++|||.|-...+... ..
T Consensus 111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA-KR 186 (502)
T KOG0574|consen 111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA-KR 186 (502)
T ss_pred CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH-hh
Confidence 99999999998888999999999999999999999987 479999999999999999999999999975443222 23
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC--CCCH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS--NFDK 652 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 652 (756)
.++.||+.|||||++..-.|+.++||||+|+...||..|++||..-... ...-++...+.. ..+.
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-------------RAIFMIPT~PPPTF~KPE 253 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-------------RAIFMIPTKPPPTFKKPE 253 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-------------ceeEeccCCCCCCCCChH
Confidence 4578999999999999999999999999999999999999998433221 112223333333 3355
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.....+-++++.|+-..|++|-|+.++.+
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 56778999999999999999999998854
No 167
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4e-37 Score=318.35 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=206.0
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.++|...+.||+|+||.||+|...++..+|+|.+... ......+.+|++++++++|+||+++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 3578889999999999999999878888999988653 2345678999999999999999999999887 7789999999
Q ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++|+|.+++... ...+++..+..++.|++.||+|||+.| ++||||||+||+++.++.+||+|||.+..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence 999999999753 446899999999999999999999986 9999999999999999999999999997654332222
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||++....++.++|||||||++|++++ |+.||...+......+. ..+..... ..
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~----~~~~~~~~---------~~ 226 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL----ERGYRMPR---------PE 226 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHH----hCCCCCCC---------cc
Confidence 223346678999999998889999999999999999999 89998665443333221 11111110 11
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
.....+.+++.+|++.+|++||++.++.+.|+.
T Consensus 227 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 227 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 123348899999999999999999999999874
No 168
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.9e-37 Score=332.53 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=199.4
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+++.. +++.||+|.+.+. .......+.+|+.++..++|++|+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999954 5788999998642 1222345788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999999999876667999999999999999999999986 99999999999999999999999999975543333
Q ss_pred ceeeccccCccCCchHhhh-----cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 572 HISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||...+....... ............ .
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~---i~~~~~~~~~p~--~ 232 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHKERFQFPA--Q 232 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHH---HhCCCccccCCC--c
Confidence 3334467999999999986 34688999999999999999999999976654332221 111111111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCC--CCCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPT--IRPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~--~RPt~~ev~~~ 682 (756)
.... ...+.+++.+|+..++. .|+++.|+++.
T Consensus 233 ~~~~----s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 233 VTDV----SEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cccC----CHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0112 23477888887755444 46889888765
No 169
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-37 Score=331.18 Aligned_cols=237 Identities=24% Similarity=0.365 Sum_probs=189.2
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHH-HHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIG-MISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999995 568899999986532 222344555654 57889999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 155 (321)
T cd05603 81 GELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTST 155 (321)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccccc
Confidence 9999888654 46888999999999999999999986 9999999999999999999999999987532221 12334
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. .. .. .+.....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~-~~-~~---------~~~~~~~ 221 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNI---LH-KP-LQ---------LPGGKTV 221 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHH---hc-CC-CC---------CCCCCCH
Confidence 67999999999999888999999999999999999999999776543322211 11 10 01 1111233
Q ss_pred HHHHHHHHhhcCCCCCCCCHH
Q 004400 657 VMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~ 677 (756)
.+.+++.+|++.+|.+||+..
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCC
Confidence 488999999999999999764
No 170
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2e-37 Score=338.05 Aligned_cols=257 Identities=26% Similarity=0.406 Sum_probs=202.7
Q ss_pred hcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccCc-ccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSK-QGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 486 (756)
.++|...+.||+|+||.||+|++. .++.||+|+++.... ...+.+.+|+.++.++. |||||+++++|...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 346778899999999999999853 346899999975432 22357889999999997 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC-----------------------------------------------------------
Q 004400 487 LLLIYEYLENNSLARALFEHR----------------------------------------------------------- 507 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------------- 507 (756)
.++||||+++|+|.++++...
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 999999999999999996432
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe
Q 004400 508 --------------------------------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL 549 (756)
Q Consensus 508 --------------------------------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill 549 (756)
..+++..+.+++.|++.||+|||+.+ |+||||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEE
Confidence 23677888999999999999999886 9999999999999
Q ss_pred cCCCCEEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHH
Q 004400 550 DKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLD 627 (756)
Q Consensus 550 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 627 (756)
++++.+||+|||+++....... .......++..|+|||.+....++.++|||||||++|||++ |+.||..........
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~ 352 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY 352 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH
Confidence 9999999999999986433221 11223457889999999998889999999999999999998 888985433222111
Q ss_pred HHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 628 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
... ..+.... .+......+.+++.+||+.+|.+||++++|++.|+..
T Consensus 353 --~~~-~~~~~~~---------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 353 --NAI-KRGYRMA---------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred --HHH-HcCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 111 1111111 1111223588999999999999999999999999864
No 171
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.9e-37 Score=316.95 Aligned_cols=247 Identities=30% Similarity=0.445 Sum_probs=200.5
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEE-eCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCI-EGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~ 494 (756)
++|...+.||+|+||.||+|... |..||+|.+... ...+.+.+|+.++++++|+|++++++++. +++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 47788899999999999999765 778999998643 23467899999999999999999999765 456789999999
Q ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++++|.+++.... ..+++..+..++.|++.||+|||++| |+||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999997543 35899999999999999999999986 9999999999999999999999999987543221
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
....++..|+|||++....++.++|||||||++|||++ |+.||...+......+. ..+..... ..
T Consensus 157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~~---------~~ 222 (256)
T cd05082 157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV----EKGYKMDA---------PD 222 (256)
T ss_pred -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----hcCCCCCC---------CC
Confidence 22345678999999988889999999999999999998 99998655443332221 11111111 11
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
.....+.+++.+||+.+|++|||+.++++.|+.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 123358899999999999999999999999874
No 172
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.7e-37 Score=319.31 Aligned_cols=257 Identities=26% Similarity=0.350 Sum_probs=205.1
Q ss_pred HHHhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 411 IKAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 411 ~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
++.+++++.....||+|+||.||+|. ..++..||+|.+........+.+.+|+.++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 44567778888899999999999999 45678899999877655566789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-CCCEEEccCCccccC
Q 004400 490 IYEYLENNSLARALFEHRLKL--DWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFGLAKLD 566 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-~~~~kl~DFGla~~~ 566 (756)
|+||+++++|.+++......+ ++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.++|+|||.+...
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 999999999999998654455 88899999999999999999986 999999999999986 678999999998765
Q ss_pred cccCcceeeccccCccCCchHhhhcCC--CCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccccc
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMRGH--LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (756)
...... .....|+..|+|||++.+.. ++.++||||||+++|+|++|+.||...+......+...... .
T Consensus 160 ~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~--~------- 229 (268)
T cd06624 160 AGINPC-TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK--I------- 229 (268)
T ss_pred ccCCCc-cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc--c-------
Confidence 432221 22345889999999987643 78899999999999999999999854332221111110000 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+......+.+++.+||+.+|++||++.|+++.
T Consensus 230 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 230 --HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred --CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 011122233458899999999999999999998763
No 173
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.9e-37 Score=318.24 Aligned_cols=257 Identities=25% Similarity=0.432 Sum_probs=207.5
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+|++++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999965 8999999988642 2233567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 492 EYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 492 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
||+++|+|.+++.. ....+++..+..++.+++.||+|||+.| |+||||||+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998863 2446899999999999999999999986 99999999999999999999999999876543
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||..... ...+...... .+... +.+.
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~-~~~~~----~~~~- 230 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIE-KCDYP----PLPA- 230 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHHhhhh-cCCCC----CCCh-
Confidence 3221 2234688899999999888899999999999999999999999854431 1111111111 11111 1111
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
......+.+++.+||+.+|++||++.+|+++|+.+
T Consensus 231 ---~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 231 ---DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred ---hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 12234588999999999999999999999999854
No 174
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.5e-37 Score=317.18 Aligned_cols=249 Identities=31% Similarity=0.501 Sum_probs=205.6
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.++|...+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++++++|+||+++++++.++...++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888899999999999999865 78899999976544 4678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999999997543 36899999999999999999999986 99999999999999999999999999986533221
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
...++..|+|||++..+.++.++||||||+++||+++ |+.||............ ..+..... ...+
T Consensus 158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~~-----~~~~-- 224 (256)
T cd05039 158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHV----EKGYRMEA-----PEGC-- 224 (256)
T ss_pred --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH----hcCCCCCC-----ccCC--
Confidence 2335678999999988889999999999999999997 99998655433322211 11111111 1112
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
+..+.+++.+|+..+|++||++.+++++|+.
T Consensus 225 --~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 225 --PPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --CHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 2348899999999999999999999999874
No 175
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.1e-37 Score=330.31 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=192.9
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|.. .+++.||+|+++... ......+.+|..++..+ +||||++++++|.+++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999994 578999999997532 22335578899999988 799999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||++| |+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 155 (329)
T cd05588 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DTTST 155 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC-Ccccc
Confidence 9999988654 47999999999999999999999987 9999999999999999999999999987422211 12234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh-----hHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-----YLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...++.......... . .....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~p~~~- 228 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-R-----IPRSL- 228 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-C-----CCCCC-
Confidence 67999999999999989999999999999999999999999532111 111111111111110 0 11112
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC------HHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPS------MSSVLR 681 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt------~~ev~~ 681 (756)
...+.+++.+|++.||.+||+ +.++++
T Consensus 229 ---~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 229 ---SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ---CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 234788999999999999998 556543
No 176
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-37 Score=327.68 Aligned_cols=259 Identities=27% Similarity=0.438 Sum_probs=206.5
Q ss_pred hhcCccccCcccCCCCccEEEeec--------cCCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL--------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIE 483 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 483 (756)
..++|...+.||+|+||.||+|+. .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 346788889999999999999963 134579999986542 33456789999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceE
Q 004400 484 GNQLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVL 548 (756)
Q Consensus 484 ~~~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nil 548 (756)
+...++||||+++|+|.+++.... ..+++.++..++.||+.||+|||+.| |+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEE
Confidence 999999999999999999997532 35788999999999999999999986 999999999999
Q ss_pred ecCCCCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHH
Q 004400 549 LDKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLL 626 (756)
Q Consensus 549 l~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~ 626 (756)
+++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++||+++ |..||.........
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 249 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 249 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 9999999999999998664432221 222346778999999988889999999999999999998 78888654433322
Q ss_pred HHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 627 DWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
.. .. ....... +......+.+++.+||+.+|.+||++.|+++.|+++..
T Consensus 250 ~~---~~-~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 250 KL---LK-EGHRMDK---------PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HH---HH-cCCcCCC---------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 21 11 1111111 11123458889999999999999999999999987644
No 177
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.9e-37 Score=316.11 Aligned_cols=250 Identities=27% Similarity=0.430 Sum_probs=206.3
Q ss_pred hcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
.++|+..+.||+|+||.||+|... +++.|++|.+..... .+.+.+|++++++++||||+++++++.++...++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 357888999999999999999965 488999999865432 67899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++......+++..+..++.|++.||+|||+.+ ++||||+|+||+++.++.+||+|||++........ .
T Consensus 80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (256)
T cd06612 80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-K 155 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-c
Confidence 9999999999876778999999999999999999999986 99999999999999999999999999986554322 2
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||........... . ... .......+..
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~---~-~~~-------~~~~~~~~~~ 224 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM---I-PNK-------PPPTLSDPEK 224 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh---h-ccC-------CCCCCCchhh
Confidence 2334588999999999988999999999999999999999999965433221110 0 000 0000111222
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....+.+++.+||+.+|++||++.||++
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 3345889999999999999999999976
No 178
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.4e-37 Score=314.55 Aligned_cols=247 Identities=30% Similarity=0.460 Sum_probs=201.2
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHH
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLA 500 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 500 (756)
+.||+|+||.||+|...+++.||+|.+...... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 479999999999999777999999998765333 4567899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee-ecccc
Q 004400 501 RALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS-TRVAG 579 (756)
Q Consensus 501 ~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~-~~~~g 579 (756)
+++......+++..+..++.+++.||+|||+++ ++||||||+||+++.++.+||+|||++........... ....+
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 999766667899999999999999999999986 99999999999999999999999999986542221111 12234
Q ss_pred CccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHH
Q 004400 580 TIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVM 658 (756)
Q Consensus 580 t~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 658 (756)
+..|+|||.+.++.++.++|||||||++|||++ |..||............ ..... ...+...+..+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~~ 224 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERI----ESGYR---------MPAPQLCPEEI 224 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHH----hcCCC---------CCCCccCCHHH
Confidence 667999999988899999999999999999999 78888655432222211 11100 01111223458
Q ss_pred HHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 659 INVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 659 ~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.+++.+|++.+|.+||++.|+++.|+
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHhh
Confidence 99999999999999999999999886
No 179
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.9e-37 Score=343.67 Aligned_cols=259 Identities=21% Similarity=0.287 Sum_probs=194.2
Q ss_pred hhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--------
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEG-------- 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 484 (756)
..++|...+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 346799999999999999999995 568899999885432 2345799999999999999999987532
Q ss_pred CeEEEEEEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccC
Q 004400 485 NQLLLIYEYLENNSLARALF---EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDF 560 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DF 560 (756)
...++||||+++ +|.+++. .....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence 246799999985 6766664 24457899999999999999999999997 99999999999999665 6999999
Q ss_pred CccccCcccCcceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc--
Q 004400 561 GLAKLDEEENTHISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-- 637 (756)
Q Consensus 561 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 637 (756)
|+|+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+..................
T Consensus 216 Gla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 216 GSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred ccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 99986543222 2335689999999998764 689999999999999999999999976654333222111111000
Q ss_pred --------cccc-----cccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 --------LMEL-----VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 --------~~~~-----~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... ........++......+.+++.+||+.||.+|||+.|+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000 00000000111123458899999999999999999999743
No 180
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.9e-37 Score=320.93 Aligned_cols=239 Identities=24% Similarity=0.368 Sum_probs=190.0
Q ss_pred cccCCCCccEEEeeccC-------------------------CcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeE
Q 004400 423 NIGEGGFGPVYKGLLAD-------------------------GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKL 477 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 477 (756)
.||+|+||.||+|.+.. ...||+|.+..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 13588999876544445678899999999999999999
Q ss_pred eeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC----
Q 004400 478 YGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---- 553 (756)
Q Consensus 478 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~---- 553 (756)
+++|.++...++||||+++|+|..++......+++..+.+++.|+++||+|||+++ |+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcccC
Confidence 99999999999999999999999999766668999999999999999999999986 99999999999997643
Q ss_pred ---CEEEccCCccccCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHH-hCCCCCCccchhhHHHH
Q 004400 554 ---NSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIV-SGRSNVTKEDMFYLLDW 628 (756)
Q Consensus 554 ---~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell-tg~~p~~~~~~~~~~~~ 628 (756)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||..........+
T Consensus 159 ~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 233 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF 233 (274)
T ss_pred ccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 3799999998643221 12357888999998875 56899999999999999985 68999865433222111
Q ss_pred HHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 629 ALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
. .... .. ..... ..+.+++.+||+.+|++||++.+|++.|+
T Consensus 234 ~----~~~~--~~-----~~~~~----~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 234 Y----EKKH--RL-----PEPSC----KELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H----Hhcc--CC-----CCCCC----hHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 1000 00 01111 24889999999999999999999998774
No 181
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-37 Score=327.61 Aligned_cols=258 Identities=28% Similarity=0.437 Sum_probs=204.2
Q ss_pred hcCccccCcccCCCCccEEEeecc--------CCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA--------DGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEG 484 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 484 (756)
.++|...+.||+|+||.||+|... ++..+|+|.+.... .....++.+|+++++++ +||||++++++|..+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357889999999999999999742 23579999997542 23345688899999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe
Q 004400 485 NQLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL 549 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill 549 (756)
+..++||||+++|+|.+++.... ..+++.++.+++.|++.||+|||+.| ++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 99999999999999999997532 25889999999999999999999986 9999999999999
Q ss_pred cCCCCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHH
Q 004400 550 DKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLD 627 (756)
Q Consensus 550 ~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 627 (756)
+.++.+||+|||.++......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||..........
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~ 253 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 253 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 999999999999997654322111 112234568999999998889999999999999999998 888885544322221
Q ss_pred HHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 628 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
.. ......+ .+......+.+++.+||+.+|++||++.+|++.|+++..
T Consensus 254 ---~~-~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 254 ---LL-KEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred ---HH-HcCCCCC---------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 11 1111111 111123358889999999999999999999999986543
No 182
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.7e-37 Score=323.67 Aligned_cols=255 Identities=29% Similarity=0.493 Sum_probs=204.3
Q ss_pred hhcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 486 (756)
..++|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.++++++||||+++++++.+++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3467899999999999999999853 46789999987542 2334678999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCC
Q 004400 487 LLLIYEYLENNSLARALFEHR---------------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKAT 545 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~---------------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~ 545 (756)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHh
Confidence 999999999999999997422 24788899999999999999999986 999999999
Q ss_pred ceEecCCCCEEEccCCccccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchh
Q 004400 546 NVLLDKDLNSKISDFGLAKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMF 623 (756)
Q Consensus 546 Nill~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~ 623 (756)
||++++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+....
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999875433221 11222345678999999998899999999999999999998 88888655433
Q ss_pred hHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 624 YLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
..... . ..+..... +......+.+++.+|++.+|++||++.|+++.|+
T Consensus 240 ~~~~~---~-~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 240 EVIYY---V-RDGNVLSC---------PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHH---H-hcCCCCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 32221 1 11111111 1112235889999999999999999999999987
No 183
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.5e-37 Score=320.63 Aligned_cols=255 Identities=27% Similarity=0.398 Sum_probs=205.6
Q ss_pred cCccccCcccCCCCccEEEeeccC----CcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLAD----GTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
++|...+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 467788999999999999998543 3478999887654 3445679999999999999999999999875 557899
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+++|+|.+++......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999999999876667899999999999999999999986 9999999999999999999999999998655443
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
........++..|+|||.+....++.++||||||+++||+++ |..||..........+. ........
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~----~~~~~~~~-------- 229 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI----ENGERLPM-------- 229 (270)
T ss_pred ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH----HcCCcCCC--------
Confidence 322233345678999999988889999999999999999986 99999665543333221 11111111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 687 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 687 (756)
+...+..+.+++.+|+..+|.+||++.++++.|+++.
T Consensus 230 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 230 -PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred -CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1112235889999999999999999999999998653
No 184
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.4e-37 Score=316.65 Aligned_cols=240 Identities=23% Similarity=0.395 Sum_probs=191.1
Q ss_pred CcccCCCCccEEEeeccC-------------CcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 422 NNIGEGGFGPVYKGLLAD-------------GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
+.||+|+||.||+|.+.+ ...|++|.+..........|.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2358899887655555567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC-------EEEccCC
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN-------SKISDFG 561 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~-------~kl~DFG 561 (756)
+||||+++|+|..++......+++..+.+++.||++||+|||+.+ |+||||||+|||++.++. +|++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999998766667999999999999999999999986 999999999999987664 8999999
Q ss_pred ccccCcccCcceeeccccCccCCchHhhh-cCCCCcccchhhHHHHHHHHH-hCCCCCCccchhhHHHHHHHHHhcCccc
Q 004400 562 LAKLDEEENTHISTRVAGTIGYMAPEYAM-RGHLTEKADVYSFGIVALEIV-SGRSNVTKEDMFYLLDWALVLKEQGKLM 639 (756)
Q Consensus 562 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGv~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (756)
++...... ....|+..|+|||.+. +..++.++|||||||++|||+ +|+.|+.......... ... ...
T Consensus 158 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~----~~~-~~~- 226 (262)
T cd05077 158 IPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER----FYE-GQC- 226 (262)
T ss_pred CCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH----HHh-cCc-
Confidence 98754321 2245788999999886 466899999999999999998 5888875443221110 000 100
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 640 ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.. ... ....+.+++.+||+.||++||++.+|++.++
T Consensus 227 ~~-----~~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 227 ML-----VTP----SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred cC-----CCC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 00 011 1234789999999999999999999998763
No 185
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=9.2e-37 Score=315.08 Aligned_cols=247 Identities=28% Similarity=0.469 Sum_probs=198.3
Q ss_pred CcccCCCCccEEEeecc--C--CcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLLA--D--GTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|.+. + +..||+|.+..... ...+++.+|+++++.+.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 47999999999999742 2 26899999875533 24567899999999999999999999876 4568999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee--
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS-- 574 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~-- 574 (756)
|+|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999997654 7899999999999999999999986 99999999999999999999999999986654332221
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
....++..|+|||.+....++.++|||||||++||+++ |+.||...+......+.. . ...... +..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~---~-~~~~~~---------~~~ 222 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE---S-GERLPR---------PEE 222 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH---c-CCcCCC---------CCC
Confidence 11234568999999988899999999999999999998 999996655433332221 1 111111 111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
....+.+++.+||..+|++||++.++++.|++.
T Consensus 223 ~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 223 CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 223588999999999999999999999999864
No 186
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.3e-37 Score=320.92 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=201.4
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
|+..+.||+|+||.||+|.. .++..+++|.+........+.+.+|+++++.++||||++++++|..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 56678899999999999995 45788999998765555567789999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........ ....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~ 162 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-RRDS 162 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccccccc-cccc
Confidence 9999988765667999999999999999999999986 99999999999999999999999999875433221 2233
Q ss_pred cccCccCCchHhhh-----cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 577 VAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 577 ~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
..|+..|+|||++. +..++.++|||||||++|||++|+.||...+....... .... ...... .+
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~-~~~~~~-------~~ 231 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLK---IAKS-EPPTLA-------QP 231 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHH---Hhhc-CCCCCC-------Cc
Confidence 56899999999984 34578899999999999999999999965543222111 1111 000110 11
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
......+.+++.+||+.+|.+||++.++++.
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122358899999999999999999998765
No 187
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.6e-37 Score=320.62 Aligned_cols=259 Identities=26% Similarity=0.415 Sum_probs=202.6
Q ss_pred cCccccCcccCCCCccEEEeec-----cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-----ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQL 487 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 487 (756)
+.|...+.||+|+||.||.|.. .++..||+|.++... ......+.+|++++++++||||+++++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467889999999999999973 357899999987543 33346789999999999999999999999875 578
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||+++++|.+++......+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccccc
Confidence 9999999999999999766557899999999999999999999987 9999999999999999999999999998654
Q ss_pred ccCcc--eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh-----------hHHHHHHHHHh
Q 004400 568 EENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-----------YLLDWALVLKE 634 (756)
Q Consensus 568 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-----------~~~~~~~~~~~ 634 (756)
..... ......|+..|+|||++.+..++.++|||||||++||+++++.|....... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE 240 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH
Confidence 33221 122345677899999998888999999999999999999987765221100 00010101111
Q ss_pred cCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 635 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
...... .... ....+.+++.+|++.+|++||++.++++.|+++
T Consensus 241 ~~~~~~-----~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 241 EGKRLP-----RPPN----CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCccCC-----CCCC----CCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111110 0111 234589999999999999999999999999864
No 188
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.6e-37 Score=353.65 Aligned_cols=259 Identities=23% Similarity=0.359 Sum_probs=203.3
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|+. .+|+.||+|++.... ....+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4788999999999999999994 468999999987532 223457899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCC
Q 004400 492 EYLENNSLARALFEH----------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFG 561 (756)
Q Consensus 492 e~~~~gsL~~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFG 561 (756)
||++||+|.+++... ....++..+.+++.||++||+|||+.| |+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998632 124567788999999999999999986 9999999999999999999999999
Q ss_pred ccccCcccC-----------------cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhh
Q 004400 562 LAKLDEEEN-----------------THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY 624 (756)
Q Consensus 562 la~~~~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 624 (756)
+++...... ........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998652110 001123569999999999999999999999999999999999999996543322
Q ss_pred HHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHhccCcc
Q 004400 625 LLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRP-SMSSVLRMLECGVD 688 (756)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-t~~ev~~~L~~~~~ 688 (756)
.... ..........+... .+..+.+++.+|++.||++|| +++++.+.|+.+..
T Consensus 239 i~~~-------~~i~~P~~~~p~~~----iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYR-------DVILSPIEVAPYRE----IPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhh-------hhccChhhcccccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1110 00000000011112 223478899999999999996 66777777776533
No 189
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.7e-37 Score=318.57 Aligned_cols=247 Identities=30% Similarity=0.452 Sum_probs=195.2
Q ss_pred CcccCCCCccEEEeecc-CCc--EEEEEEcccc-CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLLA-DGT--AIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|... ++. .+|+|.++.. .....+.+.+|++++.++ +||||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 46899999999999964 443 4688888643 234456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCC
Q 004400 497 NSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFG 561 (756)
Q Consensus 497 gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFG 561 (756)
|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999997432 24789999999999999999999986 9999999999999999999999999
Q ss_pred ccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcccc
Q 004400 562 LAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLME 640 (756)
Q Consensus 562 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (756)
++........ ......+..|+|||++....++.++|||||||++|||++ |+.||...+....... ... ....+
T Consensus 158 l~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~---~~~-~~~~~ 231 (270)
T cd05047 158 LSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK---LPQ-GYRLE 231 (270)
T ss_pred Cccccchhhh--ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHH---HhC-CCCCC
Confidence 9863221111 111234667999999988889999999999999999997 9999965543322211 111 11111
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 641 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 641 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
. +......+.+++.+||+.+|.+||++.++++.|+++
T Consensus 232 ~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 232 K---------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred C---------CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 1 111223488999999999999999999999999854
No 190
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-38 Score=299.60 Aligned_cols=253 Identities=23% Similarity=0.365 Sum_probs=203.9
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc----cc----HHHHHHHHHHHHhC-CCCceeeEeeEEEe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK----QG----NREFINEIGMISAL-QHPNLVKLYGCCIE 483 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----~~----~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 483 (756)
.-+.|...+.||+|..++|-++. ..+|+.+|+|++..... .. .+.-.+|+.+|+++ .||+|+++.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 34577888999999999999998 45789999999864311 11 23456799999998 69999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcc
Q 004400 484 GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 563 (756)
Q Consensus 484 ~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla 563 (756)
+...++|+|.|+.|.|.|+|.+. ..+++...++|+.|+.+|++|||... |||||+||+|||+|++.++||+|||+|
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecccee
Confidence 99999999999999999999654 58999999999999999999999984 999999999999999999999999999
Q ss_pred ccCcccCcceeeccccCccCCchHhhhc------CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc
Q 004400 564 KLDEEENTHISTRVAGTIGYMAPEYAMR------GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK 637 (756)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 637 (756)
....+... -...+||++|.|||.+.. ..|+..+|+||+|||||-++.|-.||+.....-.+... .+++
T Consensus 171 ~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~I----meGk 244 (411)
T KOG0599|consen 171 CQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMI----MEGK 244 (411)
T ss_pred eccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHH----Hhcc
Confidence 87665433 356899999999999864 45888999999999999999999999655433332211 1111
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. +. ..-..+......+++.+|++.||++|-|++|+++.
T Consensus 245 yq--F~----speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 245 YQ--FR----SPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred cc--cC----CcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 10 00 01112334458899999999999999999999653
No 191
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7.1e-37 Score=324.67 Aligned_cols=261 Identities=23% Similarity=0.352 Sum_probs=202.1
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|+..+.||+|+||.||+|.. .++..+|+|.+.... ......+.+|++++++++||||++++++|.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688899999999999999984 468889999886542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++... ..+++..+..++.|+++||+|||+.. +++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (308)
T cd06615 81 MDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 154 (308)
T ss_pred cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc---
Confidence 9999999999755 47899999999999999999999742 49999999999999999999999999987543321
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccc--------------
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM-------------- 639 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------------- 639 (756)
.....|+..|+|||.+.+..++.++|||||||++|||++|+.||...+......+...........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 233568999999999988889999999999999999999999996544322221110000000000
Q ss_pred ----------cccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 ----------ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 ----------~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..................+.+++.+|+..+|++||++.+|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000000123358899999999999999999999876
No 192
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.6e-37 Score=315.24 Aligned_cols=247 Identities=27% Similarity=0.440 Sum_probs=200.6
Q ss_pred CcccCCCCccEEEeeccC--Cc--EEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLLAD--GT--AIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|++|.||+|.+.+ ++ .||+|.+..... ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998543 33 689999987655 456789999999999999999999999988 899999999999
Q ss_pred CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce--
Q 004400 497 NSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI-- 573 (756)
Q Consensus 497 gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~-- 573 (756)
|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999997654 57899999999999999999999986 9999999999999999999999999998765432221
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||++....++.++|||||||++|||++ |+.||............. ....... .+.
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~---~~~~~~~---------~~~ 224 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKID---KEGERLE---------RPE 224 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---hcCCcCC---------CCc
Confidence 123457889999999998899999999999999999999 999996544433222111 1111110 011
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
..+..+.+++.+|++.+|++||++.++++.|.
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 12345889999999999999999999999875
No 193
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.6e-37 Score=328.07 Aligned_cols=241 Identities=23% Similarity=0.341 Sum_probs=194.8
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 491 (756)
+|+..+.||+|+||.||+|. ..+|+.||+|++.... ....+.+..|..+++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 46778899999999999998 4578999999987532 233456788999998885 577888999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||++| |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 81 EYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCCc
Confidence 999999999998654 36999999999999999999999987 99999999999999999999999999875432221
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+........ .. ... .++
T Consensus 157 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i---~~-~~~----------~~p 221 (323)
T cd05615 157 -TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI---ME-HNV----------SYP 221 (323)
T ss_pred -cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-CCC----------CCC
Confidence 223456999999999999888999999999999999999999999766543332211 11 000 011
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~ 676 (756)
......+.+++.+|++.+|.+|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1122347889999999999999985
No 194
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.3e-37 Score=315.39 Aligned_cols=249 Identities=21% Similarity=0.313 Sum_probs=203.2
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
+|+..+.||+|+||.||++.. .+++.||+|.+... .....+.+.+|+.+++.++|+||+++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 467789999999999999984 47899999988543 3334567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.++++|||.++....... .
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-Y 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc-c
Confidence 99999998864 3446899999999999999999999986 99999999999999999999999999976543322 2
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||...+...... .. ..+..... +..
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~---~~-~~~~~~~~---------~~~ 223 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLIL---KV-CQGSYKPL---------PSH 223 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHH---HH-hcCCCCCC---------Ccc
Confidence 234568899999999998889999999999999999999999997654332211 11 11111111 111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.+++.+||+.+|++||++.+++..
T Consensus 224 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 224 YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 22348899999999999999999999764
No 195
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.5e-37 Score=322.37 Aligned_cols=257 Identities=25% Similarity=0.423 Sum_probs=203.4
Q ss_pred hhcCccccCcccCCCCccEEEeecc------CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 486 (756)
..++|+..+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4568899999999999999999743 24589999886442 2234568889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEE
Q 004400 487 LLLIYEYLENNSLARALFEHR---------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKI 557 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl 557 (756)
.++||||+++|+|.+++.... ...++..+.+++.|++.||+|||+.+ |+||||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 999999999999999997421 34567788999999999999999986 999999999999999999999
Q ss_pred ccCCccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhc
Q 004400 558 SDFGLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQ 635 (756)
Q Consensus 558 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 635 (756)
+|||+++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||........... ...
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~---~~~- 236 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---VMD- 236 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---HHc-
Confidence 999999854332221 1222345778999999998899999999999999999998 7888865443332221 111
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 636 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
...... +......+.+++.+|++.+|++||++.++++.|+..
T Consensus 237 ~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 237 GGYLDQ---------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCCCCC---------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 111111 111124589999999999999999999999998853
No 196
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.9e-37 Score=330.16 Aligned_cols=242 Identities=26% Similarity=0.335 Sum_probs=191.7
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHH-HHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIG-MISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|+. .+++.||+|++.... ......+..|.. +++.++||||+++++++.+++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999995 467889999986532 122334455544 56788999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+.+..+..++.||++||+|||+.| |+||||||+|||++.++.+||+|||+++....... ....
T Consensus 81 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-~~~~ 155 (325)
T cd05602 81 GELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-TTST 155 (325)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-Cccc
Confidence 9999998754 46788899999999999999999997 99999999999999999999999999975322211 2334
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++||||+||++|||++|+.||...+........ .. ... . ..... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~-~~~-~-----~~~~~----~~ 221 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI---LN-KPL-Q-----LKPNI----TN 221 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHH---Hh-CCc-C-----CCCCC----CH
Confidence 67999999999999999999999999999999999999999766544333221 11 000 0 01112 23
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 657 VMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.+.+++.+|++.+|.+||++.+.+..
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 48899999999999999998754433
No 197
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-36 Score=314.01 Aligned_cols=247 Identities=33% Similarity=0.541 Sum_probs=203.6
Q ss_pred CcccCCCCccEEEeeccC----CcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLLAD----GTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|.... +..|++|.+...... ..+.+.+|+++++.++|+||+++++++.++...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999999643 789999999765333 257889999999999999999999999999999999999999
Q ss_pred CCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 497 NSLARALFEH--------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 497 gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999865 467999999999999999999999986 99999999999999999999999999987654
Q ss_pred cCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 569 ENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 569 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
... .......++..|+|||.+....++.++||||+|+++|||++ |+.||............ .. .....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~-~~~~~------ 227 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL---RK-GYRLP------ 227 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---Hc-CCCCC------
Confidence 321 12234567889999999988889999999999999999999 68998665443332221 11 11111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.+......+.+++.+||+.+|++||++.|+++.|+
T Consensus 228 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 ---KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11112345889999999999999999999998874
No 198
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.8e-37 Score=325.32 Aligned_cols=258 Identities=27% Similarity=0.437 Sum_probs=204.5
Q ss_pred hcCccccCcccCCCCccEEEeecc--------CCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA--------DGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEG 484 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 484 (756)
.++|...+.||+|+||.||+|... +...||+|.++... ......+.+|+++++++ +||||++++++|.++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357888999999999999999731 34579999987542 23345788999999999 699999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe
Q 004400 485 NQLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL 549 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill 549 (756)
+..++||||+++|+|.+++.... ..+++.++.+++.|++.||+|||++| |+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEE
Confidence 99999999999999999997532 35889999999999999999999986 9999999999999
Q ss_pred cCCCCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHH
Q 004400 550 DKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLD 627 (756)
Q Consensus 550 ~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 627 (756)
+.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||..........
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~ 247 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK 247 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999999999999998654322211 112234567999999998889999999999999999999 888886554333222
Q ss_pred HHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 628 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
.. ........ +......+.+++.+||+.+|++||++.++++.|++...
T Consensus 248 ~~----~~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 248 LL----REGHRMDK---------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HH----HcCCCCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11 11111111 11122348899999999999999999999999986543
No 199
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.3e-37 Score=318.58 Aligned_cols=252 Identities=27% Similarity=0.409 Sum_probs=200.0
Q ss_pred HhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC------
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEG------ 484 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------ 484 (756)
.+++.|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+|+.+++++ +||||++++++|...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 4567888899999999999999984 56889999998654 33456788999999998 799999999998753
Q ss_pred CeEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcc
Q 004400 485 NQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 563 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla 563 (756)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence 4689999999999999998753 346899999999999999999999986 999999999999999999999999999
Q ss_pred ccCcccCcceeeccccCccCCchHhhh-----cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcc
Q 004400 564 KLDEEENTHISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL 638 (756)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (756)
+....... ......|+..|+|||++. ...++.++|||||||++|||++|+.||........... ... ...
T Consensus 159 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~---~~~-~~~ 233 (272)
T cd06637 159 AQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL---IPR-NPA 233 (272)
T ss_pred eecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH---Hhc-CCC
Confidence 76543222 223457899999999986 34588899999999999999999999954432221110 001 100
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 639 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
... ....+ ...+.+++.+||..+|.+||++.++++
T Consensus 234 ~~~----~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 234 PRL----KSKKW----SKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCC----CCCCc----CHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 011 11112 234889999999999999999999875
No 200
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-36 Score=319.12 Aligned_cols=245 Identities=24% Similarity=0.305 Sum_probs=195.2
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
|...+.||+|+||+||+|.. .+++.||+|.+.... ......+.+|++++++++|+||+++++++.+++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678899999999999984 578999999986532 12234578899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 9999999988753 346999999999999999999999987 99999999999999999999999999975433221
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....|+..|+|||++.+..++.++|+|||||++|||++|+.||.................... . .+..
T Consensus 158 -~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~--------~~~~ 226 (285)
T cd05632 158 -IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--E--------VYSA 226 (285)
T ss_pred -ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--c--------ccCc
Confidence 2335789999999999988999999999999999999999999965433221111110001000 0 1111
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHH
Q 004400 653 EQVMVMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ 677 (756)
.....+.+++.+|++.+|++||++.
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 227 KFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred cCCHHHHHHHHHHccCCHhHcCCCc
Confidence 1223478899999999999999943
No 201
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=9.1e-37 Score=319.36 Aligned_cols=253 Identities=26% Similarity=0.430 Sum_probs=205.5
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
.++|++.+.||+|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++++.++...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 45788889999999999999995 46899999999766555667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++........ .
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~ 159 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-K 159 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhccccc-c
Confidence 9999999999876667999999999999999999999997 99999999999999999999999999875433222 1
Q ss_pred eeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 574 STRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
.....|++.|+|||.+.. ..++.++||||||+++|||++|+.||...+...... .. ........
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~---~~-~~~~~~~~------- 228 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLL---KI-LKSEPPTL------- 228 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHH---HH-hcCCCCCc-------
Confidence 233568999999999853 446789999999999999999999996654332111 11 11111000
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+......+.+++.+||+.+|.+||++.++++.
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0111122348899999999999999999999764
No 202
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.3e-37 Score=330.89 Aligned_cols=241 Identities=24% Similarity=0.334 Sum_probs=191.7
Q ss_pred CcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHH-HHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIG-MISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|. ..+|+.||+|++.... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 469999999999998 4578999999986531 223345566655 46778999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~ 155 (325)
T cd05604 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTTTT 155 (325)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCccc
Confidence 9999888654 47899999999999999999999987 9999999999999999999999999987432211 12234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+........ .. ... . .... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~---~~-~~~----~--~~~~----~~~ 221 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI---LH-KPL----V--LRPG----ASL 221 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH---Hc-CCc----c--CCCC----CCH
Confidence 67999999999999999999999999999999999999999766543332211 11 110 0 0011 223
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 657 VMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.+.+++.+|++.+|.+||++.+.++
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCCCHH
Confidence 4778999999999999998864433
No 203
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.1e-36 Score=315.46 Aligned_cols=249 Identities=27% Similarity=0.435 Sum_probs=194.9
Q ss_pred CcccCCCCccEEEeecc----CCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEE-eCCeEEEEEEecC
Q 004400 422 NNIGEGGFGPVYKGLLA----DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCI-EGNQLLLIYEYLE 495 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~~ 495 (756)
+.||+|+||.||+|... +...||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999998543 2334567889999999999999999999876 4566899999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc---
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH--- 572 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~--- 572 (756)
+|+|.+++.......++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999999866666788889999999999999999986 999999999999999999999999999754332111
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCC-CCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGR-SNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......++..|+|||.+.+..++.++|||||||++|||++|+ .||...+....... ... +.... .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~---~~~-~~~~~-----~~~~~- 227 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY---LLQ-GRRLL-----QPEYC- 227 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---Hhc-CCCCC-----CCCcC-
Confidence 112334677899999998889999999999999999999964 55554443332221 111 11100 01111
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
+..+.+++.+||+.+|++||++.+|++.|+.+
T Consensus 228 ---~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 228 ---PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred ---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 23488999999999999999999999999864
No 204
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-36 Score=321.16 Aligned_cols=251 Identities=28% Similarity=0.457 Sum_probs=205.3
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
..+|...+.||+|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++|+||++++++|..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 3688899999999999999999 467999999999765555556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++.+. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.........
T Consensus 98 ~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~- 171 (297)
T cd06656 98 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 171 (297)
T ss_pred cCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCccC-
Confidence 9999999998643 5789999999999999999999986 999999999999999999999999998765433221
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....|++.|+|||.+.+..++.++|||||||++|++++|+.||...+....... ......+....+..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 240 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----------IATNGTPELQNPER 240 (297)
T ss_pred cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-----------eccCCCCCCCCccc
Confidence 2234688999999999988899999999999999999999999965543211100 00000111111222
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.+++.+||+.+|++||++.++++.
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33457889999999999999999999873
No 205
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.1e-37 Score=334.76 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=196.2
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|+. .+++.||+|++... .......+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688889999999999999985 56899999998643 2233456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.| |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 999999999998754 46899999999999999999999987 99999999999999999999999999874422110
Q ss_pred ----------------------------------ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCC
Q 004400 572 ----------------------------------HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 617 (756)
Q Consensus 572 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 617 (756)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0012357999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC---HHHHHH
Q 004400 618 TKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPS---MSSVLR 681 (756)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt---~~ev~~ 681 (756)
...+....... .........+. .....+ ..+.+++.+++ .+|.+|++ +.|+++
T Consensus 237 ~~~~~~~~~~~---i~~~~~~~~~p---~~~~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 237 CSETPQETYRK---VMNWKETLVFP---PEVPIS----EKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCHHHHHHH---HHcCCCceecC---CCCCCC----HHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 76654332211 11101111111 111122 23667777765 49999996 555543
No 206
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.5e-36 Score=319.84 Aligned_cols=252 Identities=27% Similarity=0.425 Sum_probs=203.3
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
+.|+..+.||+|+||.||+|.. .+++.|++|.+........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 5688889999999999999995 468999999997766556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|..++.+....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........ ..
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-~~ 167 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ-RR 167 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccccc-cc
Confidence 999999988766667999999999999999999999986 99999999999999999999999999875432211 12
Q ss_pred eccccCccCCchHhhh-----cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 575 TRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
....++..|+|||++. ...++.++|||||||++|||++|+.||...+..... ..... ...... .
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~~-~~~~~~-------~ 236 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL---LKIAK-SEPPTL-------S 236 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH---HHHhc-CCCccC-------C
Confidence 3346888999999985 345788999999999999999999998654432211 11111 111000 0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.+......+.+++.+||+.+|++||++.++++.
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111223348889999999999999999999763
No 207
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.7e-36 Score=313.81 Aligned_cols=253 Identities=26% Similarity=0.417 Sum_probs=206.8
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
++|+..+.||+|+||.||+|.. .+++.+++|.+........+.+.+|++++++++||||+++++++.+++..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 5788889999999999999995 467899999997665556678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.+........ ..
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~ 158 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-KR 158 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhh-cc
Confidence 999999998776568999999999999999999999986 99999999999999999999999999976543221 12
Q ss_pred eccccCccCCchHhhhcC---CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 575 TRVAGTIGYMAPEYAMRG---HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
....++..|+|||.+.+. .++.++||||||+++|||++|+.||........... . ...... .......
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~---~-~~~~~~-----~~~~~~~ 229 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL---I-SKSNFP-----PPKLKDK 229 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---H-HhccCC-----Cccccch
Confidence 335688899999999776 789999999999999999999999965443221110 0 011000 0001112
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
......+.+++.+||+.+|.+||++.+|+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 233456889999999999999999999875
No 208
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.1e-36 Score=316.40 Aligned_cols=254 Identities=23% Similarity=0.353 Sum_probs=201.5
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
.++|...+.||+|+||.||+|. ..+++.||+|.++.........+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 3577888999999999999998 457899999998765444456688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++... ..+++.++..++.|++.||+|||+.| ++|+||||+||+++.++.+||+|||++....... ..
T Consensus 88 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~ 162 (267)
T cd06645 88 CGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AK 162 (267)
T ss_pred cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc-cc
Confidence 9999999988654 47899999999999999999999986 9999999999999999999999999987543322 12
Q ss_pred eeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 574 STRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||.......... ............. ....+
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~ 237 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMTKSNFQPPKLK--DKMKW 237 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH---hhhccCCCCCccc--ccCCC
Confidence 23456899999999975 4568899999999999999999999985443221110 0001100000000 00112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+ ..+.+++.+|++.+|++||++.+|++.
T Consensus 238 ~----~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 238 S----NSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred C----HHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 2 347899999999999999999998763
No 209
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-36 Score=318.57 Aligned_cols=246 Identities=23% Similarity=0.392 Sum_probs=196.8
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
+|+..+.||+|+||.||+|. ..+++.||+|.+... .....+.+.+|++++++++||||++++++|..++..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 57778899999999999998 467899999998654 2333467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|..+ ..+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---~ 150 (279)
T cd06619 82 DGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---A 150 (279)
T ss_pred CCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---c
Confidence 99999654 25788899999999999999999987 9999999999999999999999999997543321 2
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhh----HHHHHHHHHhcCccccccccCCCCCC
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY----LLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
....||..|+|||++.+..++.++||||||+++|+|++|+.||....... ...+........ ... .+....
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~ 225 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-PPV----LPVGQF 225 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-CCC----CCCCcC
Confidence 33578999999999998889999999999999999999999995422111 001111010000 000 011112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+|++.+|++||++.|+++.
T Consensus 226 ----~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 226 ----SEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ----CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 2348899999999999999999999875
No 210
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.9e-37 Score=326.86 Aligned_cols=241 Identities=23% Similarity=0.307 Sum_probs=190.3
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999994 567899999997542 22345678899999888 699999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.|++.||+|||++| |+||||||+|||++.++.+||+|||+++....... ....
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 155 (327)
T cd05617 81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD-TTST 155 (327)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-ceec
Confidence 9999888654 47999999999999999999999987 99999999999999999999999999874322211 2234
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccch---hhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM---FYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....+.......... ..+..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------~~p~~ 225 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI----------RIPRF 225 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC----------CCCCC
Confidence 6799999999999999999999999999999999999999953211 1111111111111100 01111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ 677 (756)
....+.+++.+|++.||++|+++.
T Consensus 226 ~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 226 LSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCC
Confidence 223478999999999999999853
No 211
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-36 Score=334.93 Aligned_cols=259 Identities=21% Similarity=0.277 Sum_probs=197.3
Q ss_pred hhcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
....|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+|||++++++..++..++|||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 3457999999999999999999954 578899996432 346789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc-
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT- 571 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~- 571 (756)
++. ++|.+++......+++..+..++.|++.||+|||+.| ||||||||+|||++.++.+||+|||+++.......
T Consensus 241 ~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 241 KYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred ccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 995 6898888766667999999999999999999999987 99999999999999999999999999986543222
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh-----hHHHHHHHHHhcCcc-ccccc--
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-----YLLDWALVLKEQGKL-MELVD-- 643 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~-- 643 (756)
.......||+.|+|||++.+..++.++|||||||++|||++|..|+...... ........+...... .+...
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 1223467999999999999999999999999999999999988765322100 000000111110000 00000
Q ss_pred ---------------cCCC---CCCC--HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 644 ---------------TNPG---SNFD--KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 644 ---------------~~~~---~~~~--~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+. ..+. ......+.+++.+|++.||.+|||+.|+++.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 0000 0112257889999999999999999999875
No 212
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.5e-36 Score=318.33 Aligned_cols=249 Identities=25% Similarity=0.324 Sum_probs=197.1
Q ss_pred ccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 418 FATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
|+..+.||+|+||.||+|. ..+++.||+|.+..... .....+.+|+.++++++|++|+++++.+.+++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 5667889999999999998 45789999999865322 2234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 9999999998643 346899999999999999999999986 99999999999999999999999999875443222
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||................. .... .....++
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~- 229 (285)
T cd05630 158 -IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVQE----EYSEKFS- 229 (285)
T ss_pred -ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh--hhhh----hcCccCC-
Confidence 1234689999999999998999999999999999999999999965332111000000000 0000 0111222
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 004400 653 EQVMVMINVALLCANASPTIRPS-----MSSVLR 681 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt-----~~ev~~ 681 (756)
..+.+++.+||+.||++||+ +.|+++
T Consensus 230 ---~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 230 ---PDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ---HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 34789999999999999999 777765
No 213
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.7e-37 Score=328.82 Aligned_cols=258 Identities=27% Similarity=0.412 Sum_probs=200.3
Q ss_pred hcCccccCcccCCCCccEEEeec------cCCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC-C
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL------ADGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEG-N 485 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 485 (756)
.++|...+.||+|+||.||+|.. .+++.||||.++... ......+.+|+.++.++ +||||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788999999999999999973 357899999997543 22345688999999999 689999999988654 5
Q ss_pred eEEEEEEecCCCCHHHHHHhcC----------------------------------------------------------
Q 004400 486 QLLLIYEYLENNSLARALFEHR---------------------------------------------------------- 507 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------------------- 507 (756)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6899999999999999986421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc-eeeccc
Q 004400 508 --------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH-ISTRVA 578 (756)
Q Consensus 508 --------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~-~~~~~~ 578 (756)
..+++..+.+++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++........ ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 23688889999999999999999986 999999999999999999999999999764332211 122234
Q ss_pred cCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHH
Q 004400 579 GTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMV 657 (756)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (756)
+++.|+|||.+.+..++.++||||||+++|||++ |..||......... .... ..+..... + ...+ ..
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~--~~~~-~~~~~~~~----~-~~~~----~~ 310 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL-KEGTRMRA----P-DYTT----PE 310 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH--HHHH-hccCCCCC----C-CCCC----HH
Confidence 5678999999988899999999999999999997 88898543321111 1111 11111111 0 1112 24
Q ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004400 658 MINVALLCANASPTIRPSMSSVLRMLECGV 687 (756)
Q Consensus 658 l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 687 (756)
+.+++.+||+.+|++||++.||++.|+...
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 889999999999999999999999998653
No 214
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.7e-36 Score=318.69 Aligned_cols=259 Identities=24% Similarity=0.330 Sum_probs=194.7
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhC---CCCceeeEeeEEEe-----CC
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISAL---QHPNLVKLYGCCIE-----GN 485 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 485 (756)
+|+..+.||+|+||.||+|+. .+++.||+|.+..... .....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 477889999999999999984 5789999999875422 2234566777777665 69999999999864 34
Q ss_pred eEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 486 QLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
..++||||+.+ +|.+++... ...+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 58999999985 888888643 345899999999999999999999997 9999999999999999999999999998
Q ss_pred cCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC---cccc-
Q 004400 565 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG---KLME- 640 (756)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~- 640 (756)
....... .....||..|+|||++.+..++.++||||+||++|||++|+.||................... ....
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 157 IYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred cccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 6543221 233568999999999998899999999999999999999999996554332221111111000 0000
Q ss_pred ------ccccCCC---CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 641 ------LVDTNPG---SNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 641 ------~~~~~~~---~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....... ....+.....+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000 0011122345789999999999999999999875
No 215
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.3e-36 Score=312.26 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=189.6
Q ss_pred CcccCCCCccEEEeeccC---CcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 422 NNIGEGGFGPVYKGLLAD---GTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+++++.++||||++++++|.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997433 35688888764332 23456889999999999999999999999999999999999999
Q ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc-
Q 004400 498 SLARALFEHR----LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH- 572 (756)
Q Consensus 498 sL~~~l~~~~----~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~- 572 (756)
+|.+++.... ...++.....++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 9999997543 23467888999999999999999986 999999999999999999999999998754332211
Q ss_pred eeeccccCccCCchHhhhc-------CCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcccccccc
Q 004400 573 ISTRVAGTIGYMAPEYAMR-------GHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (756)
......+++.|+|||+... ..++.++|||||||++|||++ |..||............ . .. .......+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~--~-~~-~~~~~~~~ 233 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV--V-RE-QDIKLPKP 233 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH--h-hc-cCccCCCC
Confidence 1223346778999999753 356889999999999999999 77788554433222111 1 11 11111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.. +......+.+++..|| .||++||++++|++.|.
T Consensus 234 ~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 QL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11 1122334677888999 59999999999999874
No 216
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.3e-36 Score=312.33 Aligned_cols=238 Identities=27% Similarity=0.453 Sum_probs=190.5
Q ss_pred CcccCCCCccEEEeeccCCc-----------EEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 422 NNIGEGGFGPVYKGLLADGT-----------AIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
+.||+|+||.||+|...+.. .|++|.+...... ...|.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46899999999999965433 5788877654332 6789999999999999999999999988 778999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-------CEEEccCCcc
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-------NSKISDFGLA 563 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-------~~kl~DFGla 563 (756)
|||+++|+|.+++......+++..+..++.||+.||+|||+++ |+||||||+||+++.++ .+||+|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999999866557899999999999999999999986 99999999999999887 7999999999
Q ss_pred ccCcccCcceeeccccCccCCchHhhhcC--CCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcccc
Q 004400 564 KLDEEENTHISTRVAGTIGYMAPEYAMRG--HLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLME 640 (756)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (756)
..... .....++..|+|||++... .++.++|||||||++||+++ |..|+..........+ ... .....
T Consensus 156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~---~~~-~~~~~ 226 (259)
T cd05037 156 ITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERF---YQD-QHRLP 226 (259)
T ss_pred ccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHH---Hhc-CCCCC
Confidence 86443 1223567789999999876 78999999999999999999 5667644322111111 111 10000
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 641 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 641 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.+ ....+.+++.+||..+|++||++.++++.|+
T Consensus 227 ----~~-------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 227 ----MP-------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ----CC-------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 0145889999999999999999999998874
No 217
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.9e-36 Score=312.16 Aligned_cols=248 Identities=27% Similarity=0.449 Sum_probs=199.6
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcc---------cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQ---------GNREFINEIGMISALQHPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 486 (756)
+|.....||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 366778999999999999984 56889999988654222 12467889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||.++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 99999999999999999754 46899999999999999999999986 999999999999999999999999999865
Q ss_pred cccCcc-----eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccc
Q 004400 567 EEENTH-----ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMEL 641 (756)
Q Consensus 567 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (756)
...... ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||...+...... .. ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~-~~~----- 227 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF---KI-GEN----- 227 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH---HH-hcc-----
Confidence 422111 1123458899999999998889999999999999999999999996543322111 00 000
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 642 VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 642 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
..+. .+......+.+++.+||+.+|.+||++.|+++
T Consensus 228 ~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 ASPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111 11122345889999999999999999999876
No 218
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6.9e-37 Score=316.33 Aligned_cols=253 Identities=30% Similarity=0.453 Sum_probs=199.8
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccH--HHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGN--REFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
|+..+.||+|+||+||+|.. .+++.||+|.+........ ....+|+.++++++||||+++++++.++...++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 56678999999999999994 4667899999977643322 23456999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|.+++. ....+++..+..++.|+++||+|||+.+ |+||||||+||++++++.++|+|||.+..... .....
T Consensus 81 ~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-~~~~~ 155 (260)
T PF00069_consen 81 PGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSE-NNENF 155 (260)
T ss_dssp TTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTS-TTSEB
T ss_pred cccccccccc-cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccccc
Confidence 9999999997 3347899999999999999999999996 99999999999999999999999999975421 12233
Q ss_pred eccccCccCCchHhhh-cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 575 TRVAGTIGYMAPEYAM-RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
....++..|+|||++. ...++.++||||+|+++|+|++|+.||................. ..... .... ...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~---~~~~---~~~ 228 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK-RPLPS---SSQQ---SRE 228 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH-THHHH---HTTS---HTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc-ccccc---cccc---cch
Confidence 4467899999999998 78899999999999999999999999976522221111111110 00000 0000 000
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.+++.+|++.||++||++.++++.
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01458999999999999999999999763
No 219
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.4e-36 Score=329.59 Aligned_cols=259 Identities=24% Similarity=0.325 Sum_probs=196.6
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC------
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN------ 485 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 485 (756)
.++|...+.||+|+||.||+|.. .+|+.||+|.+... .......+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46889999999999999999984 56899999998653 2233467889999999999999999999986543
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 57999999976 5655553 25788999999999999999999997 99999999999999999999999999975
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHH--------------
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALV-------------- 631 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~-------------- 631 (756)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+..........
T Consensus 173 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (359)
T cd07876 173 ACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQ 250 (359)
T ss_pred cccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 43221 12345689999999999998999999999999999999999999976543321110000
Q ss_pred -----HHhc-Cccc-----cccccC---CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 632 -----LKEQ-GKLM-----ELVDTN---PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 632 -----~~~~-~~~~-----~~~~~~---~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... .... +....- ............+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 251 PTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 0000 000000 0000011123357899999999999999999999874
No 220
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.7e-37 Score=316.81 Aligned_cols=240 Identities=25% Similarity=0.436 Sum_probs=191.2
Q ss_pred CcccCCCCccEEEeeccC--------CcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 422 NNIGEGGFGPVYKGLLAD--------GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998532 234888887655444556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC--------EEEccCCcccc
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN--------SKISDFGLAKL 565 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~--------~kl~DFGla~~ 565 (756)
+++|+|.+++......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. ++++|||++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999999876667899999999999999999999986 999999999999987765 69999999875
Q ss_pred CcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCC-CCCCccchhhHHHHHHHHHhcCccccccc
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGR-SNVTKEDMFYLLDWALVLKEQGKLMELVD 643 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (756)
.... ....+++.|+|||++.+ ..++.++|||||||++|||++|. .|+...+...... ..... ...
T Consensus 158 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~---~~~~~---~~~-- 224 (258)
T cd05078 158 VLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ---FYEDR---HQL-- 224 (258)
T ss_pred cCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH---HHHcc---ccC--
Confidence 4321 23467889999999986 45899999999999999999995 5554333221111 11110 111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 644 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 644 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
+......+.+++.+||+.+|++|||++++++.|+
T Consensus 225 -------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 225 -------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111234889999999999999999999999874
No 221
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-36 Score=327.07 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=204.6
Q ss_pred hcCccccCcccCCCCccEEEeecc--------CCcEEEEEEccccC-cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA--------DGTAIAVKQLSSKS-KQGNREFINEIGMISAL-QHPNLVKLYGCCIEG 484 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 484 (756)
..+|...+.||+|+||.||+|... .+..||+|.+.... ....+.+.+|+++++++ +||||++++++|.++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 346888999999999999999732 12368999887542 33456789999999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe
Q 004400 485 NQLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL 549 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill 549 (756)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+.| |+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEE
Confidence 99999999999999999997432 35789999999999999999999986 9999999999999
Q ss_pred cCCCCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHH
Q 004400 550 DKDLNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLD 627 (756)
Q Consensus 550 ~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 627 (756)
+.++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||..........
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 247 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 247 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 999999999999998654322211 122234568999999999899999999999999999998 888886554333222
Q ss_pred HHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 628 WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
. .. ........ ... ...+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 248 ~---~~-~~~~~~~~-----~~~----~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 248 L---LK-EGHRMDKP-----ANC----THELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred H---HH-cCCCCCCC-----CCC----CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 1 11 11111111 112 2348899999999999999999999999987654
No 222
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3e-36 Score=311.02 Aligned_cols=250 Identities=25% Similarity=0.396 Sum_probs=205.4
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|+..+.||+|+||.||.+. ..+++.+++|.+... .......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 47788999999999999998 567899999987654 234456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999754 456899999999999999999999986 99999999999999999999999999986544332
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
......|++.|+|||...+..++.++||||||+++|||++|+.||...+....... .. .+..... +.
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~---~~-~~~~~~~---------~~ 223 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK---IV-QGNYTPV---------VS 223 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HH-cCCCCCC---------cc
Confidence 22345689999999999888899999999999999999999999966544332211 11 1111111 11
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
.....+.+++.+||+.+|.+||++.++++.+
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 2233488999999999999999999998753
No 223
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=328.88 Aligned_cols=246 Identities=26% Similarity=0.402 Sum_probs=203.7
Q ss_pred cccCcccCCCCccEEEeecc--CCc--EEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 419 ATDNNIGEGGFGPVYKGLLA--DGT--AIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
...++||+|.||.|++|.|. .|+ .||||.+...... ...+|.+|+.+|.+|+|||+|++||+..+ ....||+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 34578999999999999975 344 5899999876554 55789999999999999999999999887 788999999
Q ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
++.|+|.+.|++ ....|-......++.|||.||.||..++ +||||+..+|+++-....|||+|||+.+-.+.....
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 999999999986 5556888899999999999999999986 999999999999999889999999999977654333
Q ss_pred e-ee-ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 573 I-ST-RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 573 ~-~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
. .. ...-.+.|+|||.+..+.++.++|||+|||.+|||+| |..||.+.....++... +++++. .
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i----D~~erL---------p 335 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI----DAGERL---------P 335 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc----cccccC---------C
Confidence 2 11 1223568999999999999999999999999999998 78899877766555321 112111 1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
-++.+.+.+.++++.||..+|.+||||..|++
T Consensus 336 RPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 336 RPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred CCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 23334556999999999999999999999973
No 224
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.1e-36 Score=317.18 Aligned_cols=258 Identities=28% Similarity=0.428 Sum_probs=205.1
Q ss_pred cCccccCcccCCCCccEEEeecc-----CCcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-----DGTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIE--GNQL 487 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 487 (756)
++|...+.||+|+||.||+|.+. +++.||||.+...... ..+.|.+|+++++.++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35677789999999999999853 3689999999765443 45789999999999999999999999987 5678
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||+++++|.+++......+++..+..++.|++.||+|||+.| ++||||||+||+++.++.++|+|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999999876667999999999999999999999986 9999999999999999999999999998765
Q ss_pred ccCcce--eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhh------------HHHHHHHHH
Q 004400 568 EENTHI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY------------LLDWALVLK 633 (756)
Q Consensus 568 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~------------~~~~~~~~~ 633 (756)
...... .....++..|+|||......++.++||||||+++|||++|+.|+....... ...+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 322211 112345667999999988889999999999999999999999984432111 001111111
Q ss_pred hcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 634 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.... ...+......+.+++.+||+.+|++||++.||+++|+.+
T Consensus 241 -~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 -EGER---------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred -cCCc---------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1110 001111224588999999999999999999999999864
No 225
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.2e-36 Score=320.01 Aligned_cols=262 Identities=20% Similarity=0.325 Sum_probs=201.3
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++.+++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 4688899999999999999985 468899999986542 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
++ ++|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.........
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~- 160 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT- 160 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc-
Confidence 97 5899988776667899999999999999999999986 999999999999999999999999999754332221
Q ss_pred eeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc---Cccccccc------
Q 004400 574 STRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ---GKLMELVD------ 643 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~------ 643 (756)
.....+++.|+|||.+.+. .++.++|||||||++|||++|+.||...+.............. ........
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 1234578899999998754 5788999999999999999999999765543222211111000 00000000
Q ss_pred ---cCCCCC----CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 644 ---TNPGSN----FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 644 ---~~~~~~----~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+..... ........+.+++.+|++.||.+|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000 001122357899999999999999999999863
No 226
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.8e-36 Score=316.12 Aligned_cols=254 Identities=26% Similarity=0.383 Sum_probs=203.2
Q ss_pred cCccccCcccCCCCccEEEeecc------CCcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
++|...+.||+|+||.||+|+.. +.+.|++|.+...... ....+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46788899999999999999853 3467999988654333 3467999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 489 LIYEYLENNSLARALFEHR--------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997433 15899999999999999999999986 999999999999999999999999
Q ss_pred CccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccc
Q 004400 561 GLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLM 639 (756)
Q Consensus 561 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (756)
|+++..............++..|+|||.+.+..++.++||||||+++|++++ |..||............ ..+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~----~~~~~~ 237 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL----QAGKLE 237 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH----HcCCcC
Confidence 9987543322222233456788999999988889999999999999999999 78888543332222211 111111
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 640 ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.. ....++ ..+.+++.+||+.+|++||++.|+++.|.
T Consensus 238 -~~---~~~~~~----~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 238 -LP---VPEGCP----SRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -CC---CCCCCC----HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 011222 34889999999999999999999999876
No 227
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.2e-36 Score=310.81 Aligned_cols=250 Identities=34% Similarity=0.555 Sum_probs=202.8
Q ss_pred ccccCcccCCCCccEEEeeccC-----CcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 418 FATDNNIGEGGFGPVYKGLLAD-----GTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
|+..+.||+|+||.||+|...+ +..||+|.+...... ..+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456899999999999999543 388999999765333 5678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 492 EYLENNSLARALFEHRLK-LDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
||+++++|.+++...... +++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999755434 899999999999999999999996 9999999999999999999999999998665443
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
........+++.|+|||.+....++.++||||+|+++|+|++ |+.||............ ........ ...
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~~-----~~~ 228 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYL----KKGYRLPK-----PEN 228 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----hcCCCCCC-----CCc
Confidence 322222347789999999988889999999999999999998 78888654433332221 11111111 111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
....+.+++.+|+..+|++|||+.|+++.|
T Consensus 229 ----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 229 ----CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 233588899999999999999999998864
No 228
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.1e-36 Score=314.65 Aligned_cols=247 Identities=30% Similarity=0.492 Sum_probs=197.4
Q ss_pred CcccCCCCccEEEeeccC-------CcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 422 NNIGEGGFGPVYKGLLAD-------GTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+++++.++||||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 469999999999998542 2579999886543 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-----CEEEccCCc
Q 004400 494 LENNSLARALFEH------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-----NSKISDFGL 562 (756)
Q Consensus 494 ~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-----~~kl~DFGl 562 (756)
+++|+|.+++... ...+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999742 234789999999999999999999986 99999999999999887 899999999
Q ss_pred cccCcccCc-ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcccc
Q 004400 563 AKLDEEENT-HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLME 640 (756)
Q Consensus 563 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (756)
++....... .......++..|+|||++.++.++.++|||||||++|||++ |+.||...+........ ..+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~----~~~~~~~ 233 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV----TAGGRLQ 233 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH----hcCCccC
Confidence 975433221 11222345788999999999999999999999999999998 99998655443332211 1111111
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 641 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 641 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.+...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 234 ---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 234 ---------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11122345889999999999999999999999886
No 229
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.6e-36 Score=328.69 Aligned_cols=260 Identities=22% Similarity=0.299 Sum_probs=198.2
Q ss_pred hhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEG------ 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 484 (756)
..++|...+.||+|+||.||+|.. ..++.||||.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 356899999999999999999984 568899999987542 23346778899999999999999999998654
Q ss_pred CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 485 NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
...++||||+++ ++.+.+. ..+++..+..++.|+++||+|||+.| |+||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcccc
Confidence 357999999976 5666654 25889999999999999999999987 9999999999999999999999999998
Q ss_pred cCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHH------------
Q 004400 565 LDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVL------------ 632 (756)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~------------ 632 (756)
...... ......||..|+|||++.+..++.++|||||||++|||++|+.||...+...........
T Consensus 168 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 168 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 644322 223457899999999999889999999999999999999999999765533221111000
Q ss_pred -------Hhc-Ccccccc-----ccCC---CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 633 -------KEQ-GKLMELV-----DTNP---GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 633 -------~~~-~~~~~~~-----~~~~---~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
... ....... .... ...........+.+++.+|++.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000 0000000 0000 000111123457899999999999999999999875
No 230
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-36 Score=321.25 Aligned_cols=255 Identities=27% Similarity=0.462 Sum_probs=202.5
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCc----EEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGT----AIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
.++|+..+.||+|+||.||+|.. .+|. .||+|.+..... ....++.+|+.+++.++||||++++++|..+ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 35778889999999999999985 3444 478888865422 2234688999999999999999999998754 467
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+|+||+++|+|.+++......+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccC
Confidence 999999999999999877667899999999999999999999986 99999999999999999999999999986543
Q ss_pred cCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 569 ENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 569 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
..... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||..........+. ..+.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~----- 232 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL----EKGERLPQ----- 232 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HCCCCCCC-----
Confidence 32211 222345778999999988889999999999999999997 89998655433332221 11111100
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.... ...+.+++.+||..+|++||++.++++.|+.+
T Consensus 233 ~~~~----~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 233 PPIC----TIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred CCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0111 23478899999999999999999999999865
No 231
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.8e-36 Score=314.59 Aligned_cols=249 Identities=30% Similarity=0.467 Sum_probs=203.4
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|...+.||.|+||.||+|.. .+++.||+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 3677889999999999999994 478999999986543 33346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++... .+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||+++....... .
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~ 154 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS-K 154 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccc-c
Confidence 9999999998754 7899999999999999999999986 99999999999999999999999999986654322 2
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....|+..|+|||++.+..++.++||||||+++|||++|+.||...+...... .. .......... ..+
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~---~~-~~~~~~~~~~----~~~--- 223 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF---LI-PKNNPPSLEG----NKF--- 223 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH---Hh-hhcCCCCCcc----ccc---
Confidence 233568889999999998889999999999999999999999996544222111 01 1111111111 012
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||..+|++||+++++++.
T Consensus 224 -~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 224 -SKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 2348899999999999999999999774
No 232
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-37 Score=313.41 Aligned_cols=248 Identities=22% Similarity=0.361 Sum_probs=210.2
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcc--cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ--GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
+-|+..+.||+|.|+.|-.|+ .-+|..||||++.+..-+ ....+.+|++.|+.++|||||++|.+...+..+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 357788999999999999999 458999999999765322 34568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe-cCCCCEEEccCCccccCcccCc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL-DKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill-~~~~~~kl~DFGla~~~~~~~~ 571 (756)
.-++|+|.|++..+...+.+.-+.+++.||+.|+.|+|+.. +|||||||+||.+ .+-|-|||+|||++-.+.+...
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 99999999999999889999999999999999999999885 9999999999766 5567899999999976655433
Q ss_pred ceeeccccCccCCchHhhhcCCCC-cccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLT-EKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
-++.+|+..|.|||++.+..|+ +++||||+|||+|.+++|+.||...+....+. .++|-. -..
T Consensus 175 --L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT------------mImDCK--Ytv 238 (864)
T KOG4717|consen 175 --LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT------------MIMDCK--YTV 238 (864)
T ss_pred --hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh------------hhhccc--ccC
Confidence 3567999999999999998886 58999999999999999999997665443322 222211 123
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+.....+..++|..|+..||.+|.+.+||+..
T Consensus 239 PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 239 PSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred chhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 44566679999999999999999999999653
No 233
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.9e-36 Score=315.36 Aligned_cols=255 Identities=27% Similarity=0.466 Sum_probs=204.7
Q ss_pred cCccccCcccCCCCccEEEeecc-CCc----EEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGT----AIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
.+|...+.||+|+||.||+|... +|. .||+|.+..... .....+.+|+.++++++||||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999854 333 589998865532 344678899999999999999999999987 78899
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||+++|+|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999877667999999999999999999999986 999999999999999999999999999866533
Q ss_pred Cccee-eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 570 NTHIS-TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 570 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
..... ....++..|+|||.+....++.++||||||+++||+++ |+.||........... ... ...... .
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~~-~~~~~~-----~ 233 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDL---LEK-GERLPQ-----P 233 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH---HhC-CCCCCC-----C
Confidence 22211 12234568999999988889999999999999999998 9999966543332221 111 111000 0
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCc
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGV 687 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 687 (756)
...+ ..+.+++.+||..+|.+||++.++++.|+.+.
T Consensus 234 ~~~~----~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 234 PICT----IDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred CCCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1122 34788999999999999999999999998653
No 234
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-36 Score=317.20 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=203.8
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 35778889999999999999994 568899999876542 3345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+++++|.+++... ..+++..+..++.+++.||.|||+.. +++||||||+||++++++.++|+|||++.......
T Consensus 84 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-- 158 (284)
T cd06620 84 FMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-- 158 (284)
T ss_pred cCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--
Confidence 99999999988654 46899999999999999999999742 49999999999999999999999999987543221
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh--------hHHHHHHHHHhcCcccccccc
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF--------YLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 644 (756)
.....|+..|+|||++.+..++.++|||||||++|++++|+.||...... ...++........ . .
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~ 231 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-P-----P 231 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-C-----C
Confidence 12356899999999998888999999999999999999999999654321 1112211111110 0 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
... .......+.+++.+|++.||++||++.|++++..
T Consensus 232 ~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 232 RLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred CCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 000 1112345889999999999999999999998743
No 235
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-36 Score=318.35 Aligned_cols=250 Identities=28% Similarity=0.475 Sum_probs=205.0
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.+|+..+.||.|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++||||+++++++.+++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 468899999999999999998 4678999999987655555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|.+++... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......... .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~ 172 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK-R 172 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccccc-C
Confidence 999999988643 5899999999999999999999986 999999999999999999999999998765433221 2
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
....|+..|+|||.+.+..++.++|||||||++|++++|+.||...+........ .. ....... ....+
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~---~~-~~~~~~~---~~~~~---- 241 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---AT-NGTPELQ---NPEKL---- 241 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-cCCcccC---CcccC----
Confidence 2346889999999998888999999999999999999999999765543222111 11 1110000 01112
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||..+|++||++.++++.
T Consensus 242 ~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 242 SPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 2348889999999999999999999754
No 236
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=349.91 Aligned_cols=256 Identities=25% Similarity=0.376 Sum_probs=199.7
Q ss_pred HHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEe--CC
Q 004400 411 IKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE--GN 485 (756)
Q Consensus 411 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 485 (756)
-....++|.+.+.||+|+||+||+|.. .++..||+|.+... .......|..|+.++++++|||||+++++|.+ ..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 344567899999999999999999994 56788999988643 22334678999999999999999999999865 45
Q ss_pred eEEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCC----CCeEcCCCCCCceEecCC------
Q 004400 486 QLLLIYEYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESR----IKVVHRDIKATNVLLDKD------ 552 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~g~----~~iiH~Dikp~Nill~~~------ 552 (756)
.+|+||||+++|+|.++|... ...+++..++.|+.||+.||+|||+.+. .+||||||||+|||++.+
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 789999999999999999742 3469999999999999999999998541 249999999999999642
Q ss_pred -----------CCEEEccCCccccCcccCcceeeccccCccCCchHhhhc--CCCCcccchhhHHHHHHHHHhCCCCCCc
Q 004400 553 -----------LNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTK 619 (756)
Q Consensus 553 -----------~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~ 619 (756)
+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 348999999998654322 2234579999999999864 4589999999999999999999999965
Q ss_pred cchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 620 EDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....... ...... . ... +...++ ..+.+++..||+.+|.+||++.|++.
T Consensus 246 ~~~~~ql--i~~lk~-~--p~l----pi~~~S----~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANNFSQL--ISELKR-G--PDL----PIKGKS----KELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcHHHH--HHHHhc-C--CCC----CcCCCC----HHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 4432211 111111 1 010 111122 34889999999999999999999984
No 237
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.6e-36 Score=328.15 Aligned_cols=259 Identities=20% Similarity=0.279 Sum_probs=197.7
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------C
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEG------N 485 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 485 (756)
.++|...+.||+|+||.||+|. ...++.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 4688899999999999999998 4568899999987532 23346788999999999999999999987643 3
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
..|+||||+++ +|.+.+.. .+++..+..++.|++.||+|||++| |+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 57999999976 67776642 4789999999999999999999986 99999999999999999999999999986
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh-----------
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE----------- 634 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~----------- 634 (756)
..... ......||..|+|||++.+..++.++|||||||++|||++|+.||...+.............
T Consensus 176 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (364)
T cd07875 176 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253 (364)
T ss_pred cCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhh
Confidence 54322 12345689999999999999999999999999999999999999976554332221110000
Q ss_pred ---------cCcccc-----ccccCC---CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 635 ---------QGKLME-----LVDTNP---GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 635 ---------~~~~~~-----~~~~~~---~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...... ...... ...........+.+++.+|++.||.+|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 000000 000011122357899999999999999999999874
No 238
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.3e-36 Score=310.88 Aligned_cols=250 Identities=28% Similarity=0.463 Sum_probs=200.8
Q ss_pred CccccCcccCCCCccEEEeeccCCcEEEEEEccccCc------ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK------QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
+|...+.||+|+||.||+|...+++.+|+|.+..... .....+.+|++++++++|+||++++++|.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677889999999999999988899999998864321 1235688899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
+||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 9999999999999654 36889999999999999999999986 9999999999999999999999999987543211
Q ss_pred -----cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 571 -----THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 571 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
........|+..|+|||++.+..++.++||||||+++|++++|+.||...+....... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~----- 229 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY--IGAHRGLMPR----- 229 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH--hhhccCCCCC-----
Confidence 1112235689999999999988899999999999999999999999965443221110 0001011111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....+ ...+.+++.+||+.+|.+||++.|+++
T Consensus 230 ~~~~~----~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 230 LPDSF----SAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCC----CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11122 334889999999999999999999875
No 239
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-36 Score=326.54 Aligned_cols=192 Identities=23% Similarity=0.341 Sum_probs=167.3
Q ss_pred hhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
...+|...+.||+|+||.||+|.. .+++.||+|..... ....|+.++++++||||+++++++.+++..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 456899999999999999999995 45788999975432 23569999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+. ++|.+++......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 211 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-- 211 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCc--
Confidence 995 5888888776678999999999999999999999986 9999999999999999999999999997533221
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 617 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 617 (756)
......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 123456999999999999989999999999999999999976655
No 240
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.3e-36 Score=311.42 Aligned_cols=251 Identities=24% Similarity=0.408 Sum_probs=189.1
Q ss_pred CcccCCCCccEEEeeccCC---cEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 422 NNIGEGGFGPVYKGLLADG---TAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.||+|+||.||+|...++ ..+++|.+.... ....+.|.+|+.+++.++||||++++++|.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999975433 346677665432 234568999999999999999999999999999999999999999
Q ss_pred CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC-cce
Q 004400 498 SLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN-THI 573 (756)
Q Consensus 498 sL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~-~~~ 573 (756)
+|.+++.+. ....++..+..++.||+.||+|||+.+ ++||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 999999753 234667778899999999999999986 9999999999999999999999999986432211 112
Q ss_pred eeccccCccCCchHhhhc-------CCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 574 STRVAGTIGYMAPEYAMR-------GHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
.....|+..|+|||++.. ..++.++|||||||++|||++ |..||............ .. +......++.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~--~~--~~~~~~~~~~ 233 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHV--IK--DQQVKLFKPQ 233 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH--Hh--hcccccCCCc
Confidence 234568899999999753 245789999999999999997 46677544433222211 11 1112222222
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
....++ ..+.+++..|| .+|++||++.+|++.|-
T Consensus 234 ~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 234 LELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 222233 34778888999 67999999999998873
No 241
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-36 Score=331.24 Aligned_cols=258 Identities=18% Similarity=0.224 Sum_probs=197.8
Q ss_pred hcCccccCcccCCCCccEEEeecc---CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA---DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
..+|...+.||+|+||.||+|... .++.||+|.+... ..+.+|++++++++|||||++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357899999999999999999743 4578999988543 34568999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+. ++|.+++. ....+++..+..++.||+.||+|||+.| |+||||||+|||++.++.+||+|||+++.......
T Consensus 166 e~~~-~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9996 58888884 4457999999999999999999999987 99999999999999999999999999976544322
Q ss_pred c-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc-Cc-cccc-------
Q 004400 572 H-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ-GK-LMEL------- 641 (756)
Q Consensus 572 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-~~~~------- 641 (756)
. ......||+.|+|||++....++.++|||||||++|||++|+.||.+............+... +. ..+.
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 2 223467999999999999889999999999999999999999999654321111000000000 00 0000
Q ss_pred -------cc--cCCCCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 642 -------VD--TNPGSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 642 -------~~--~~~~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. ..+....+ ......+.+++.+|+..||++||++.|++..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 00000000 0112357789999999999999999999875
No 242
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.5e-36 Score=315.85 Aligned_cols=262 Identities=24% Similarity=0.346 Sum_probs=204.7
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 477888999999999999995 578999999987643 23346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+ +++|.+++......+++..+..++.||++||+|||+.+ ++|+||||+||+++.++.++|+|||++..........
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL 156 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCc
Confidence 9 99999999866678999999999999999999999986 9999999999999999999999999998665433222
Q ss_pred eeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcc------cc------
Q 004400 574 STRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL------ME------ 640 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~------ 640 (756)
.....|+..|+|||.+.+. .++.++||||+|+++|||++|+.||..........+.......... .+
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07832 157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNK 236 (286)
T ss_pred cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhc
Confidence 3345689999999998654 4689999999999999999998888655443332222111110000 00
Q ss_pred cc-ccCCCC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 641 LV-DTNPGS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 641 ~~-~~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. ...... ...++....+.+++.+|++.+|++||+++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred ccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000 0001123568899999999999999999999764
No 243
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8.3e-36 Score=309.62 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=195.5
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-----cccHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-----KQGNREFINEIGMISALQHPNLVKLYGCCIE--GNQL 487 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 487 (756)
.+|...+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++.+ +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999985 568999999886432 1223568889999999999999999999875 3678
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++++||+++++|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 99999999999999997543 5899999999999999999999886 9999999999999999999999999997543
Q ss_pred ccCcc--eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 568 EENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 568 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
..... ......++..|+|||.+.+..++.++|||||||++||+++|+.||.......... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~---~~~~~~~-------- 226 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF---KIATQPT-------- 226 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH---HHhcCCC--------
Confidence 32111 1123458899999999998889999999999999999999999996543221111 1111000
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
...++......+.+++ +||..+|++||+++||++
T Consensus 227 -~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 -NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0111222233456666 788899999999999975
No 244
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8.9e-36 Score=311.33 Aligned_cols=247 Identities=30% Similarity=0.459 Sum_probs=203.2
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.|+..+.||+|+||.||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 466778999999999999995 468899999986542 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++|+|.+++.. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 85 ~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~ 158 (277)
T cd06640 85 GGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KR 158 (277)
T ss_pred CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-cc
Confidence 99999998864 36889999999999999999999986 99999999999999999999999999976543322 12
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
....++..|+|||++.+..++.++|||||||++|||++|+.||........... .............
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 225 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-------------IPKNNPPTLTGEF 225 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-------------hhcCCCCCCchhh
Confidence 334688899999999888899999999999999999999999965543221110 0001111223344
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||+.+|++||++.++++.
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 5668899999999999999999999775
No 245
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.3e-36 Score=309.25 Aligned_cols=249 Identities=26% Similarity=0.390 Sum_probs=201.0
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEe-CCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIE-GNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV~e 492 (756)
+|+..+.||+|++|.||++.. .+++.||+|.+.... ....+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 477889999999999999994 467899999986532 2344568899999999999999999998764 456899999
Q ss_pred ecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 493 YLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 493 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
|+++++|.+++... ...+++.++..++.|++.|++|||+.| ++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999753 346899999999999999999999987 99999999999999999999999999976543222
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......|++.|+|||++.+..++.++||||||+++|++++|+.||...+..... .... .+.... .+
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~---~~~~-~~~~~~---------~~ 223 (257)
T cd08223 158 -MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLV---YRII-EGKLPP---------MP 223 (257)
T ss_pred -ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHH-hcCCCC---------Cc
Confidence 223456889999999999999999999999999999999999999655432211 1111 111111 11
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
......+.+++.+|++.+|++||++.++++.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 2233458899999999999999999999764
No 246
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.4e-36 Score=315.84 Aligned_cols=260 Identities=25% Similarity=0.332 Sum_probs=196.3
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|+..+.||+|++|.||+|+. .++..||+|.+.... ......+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477888999999999999995 478999999986532 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 494 LENNSLARALFEH--RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 494 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
++ ++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 98 5888888643 256899999999999999999999986 99999999999999999999999999975443221
Q ss_pred ceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHH-HHHHhc-----------Ccc
Q 004400 572 HISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWA-LVLKEQ-----------GKL 638 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~-~~~~~~-----------~~~ 638 (756)
......+++.|+|||.+.+. .++.++|||||||++|||++|+.||............ ...... ...
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 157 -VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred -cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 12234578899999988654 4789999999999999999999999655432211100 000000 000
Q ss_pred ccccccCCCC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 639 MELVDTNPGS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 639 ~~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.......... .........+.+++.+|++.||++|||+.+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 000011234779999999999999999999875
No 247
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.8e-36 Score=314.17 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=201.1
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999954 68999999886432 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+++++|..++.. ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 9999988877653 346899999999999999999999986 99999999999999999999999999986544322
Q ss_pred eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHH-HHh----------cCcc-c
Q 004400 573 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALV-LKE----------QGKL-M 639 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~-~~~----------~~~~-~ 639 (756)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||.............. ... .... .
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 1223457889999999876 4588999999999999999999999965543322111110 000 0000 0
Q ss_pred cccccCCCCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 ELVDTNPGSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 ~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.+....+ +.....+.+++.+||+.+|++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000011100000 1123458899999999999999999998753
No 248
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.6e-36 Score=310.87 Aligned_cols=252 Identities=27% Similarity=0.481 Sum_probs=201.3
Q ss_pred CccccCcccCCCCccEEEeeccC--CcEEEEEEccccC----------cccHHHHHHHHHHHHh-CCCCceeeEeeEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLLAD--GTAIAVKQLSSKS----------KQGNREFINEIGMISA-LQHPNLVKLYGCCIE 483 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 483 (756)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999654 7889999875321 1223457788888875 799999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 484 GNQLLLIYEYLENNSLARALF---EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 484 ~~~~~lV~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
++..++||||+++++|.+++. .....+++..+++++.|++.||.|||+.+ +++||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 999999999999999999875 34457899999999999999999999632 4999999999999999999999999
Q ss_pred CccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccc
Q 004400 561 GLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME 640 (756)
Q Consensus 561 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (756)
|.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...+....... ... .....
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~---~~~-~~~~~ 232 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATK---IVE-AVYEP 232 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHH---Hhh-ccCCc
Confidence 9998654432 22345689999999999988899999999999999999999999965543322211 111 11111
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 641 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 641 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.....++ ..+.+++.+||+.||++||++.|+..+++
T Consensus 233 ----~~~~~~~----~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 233 ----LPEGMYS----EDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ----CCcccCC----HHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111222 34889999999999999999999999886
No 249
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.1e-36 Score=322.62 Aligned_cols=193 Identities=27% Similarity=0.442 Sum_probs=160.3
Q ss_pred cCcccCCCCccEEEeecc---CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeEEEEEEecC
Q 004400 421 DNNIGEGGFGPVYKGLLA---DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE--GNQLLLIYEYLE 495 (756)
Q Consensus 421 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~ 495 (756)
.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999854 56789999986532 23567889999999999999999999864 456899999986
Q ss_pred CCCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe----cCCCCEEEccCCcc
Q 004400 496 NNSLARALFEH--------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL----DKDLNSKISDFGLA 563 (756)
Q Consensus 496 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill----~~~~~~kl~DFGla 563 (756)
+ +|.+++... ...+++..+..++.||+.||+|||++| |+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5 788777522 225889999999999999999999997 9999999999999 45678999999999
Q ss_pred ccCcccCcc--eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCc
Q 004400 564 KLDEEENTH--ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTK 619 (756)
Q Consensus 564 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~ 619 (756)
+........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 865433221 1234678999999999977 4589999999999999999999999953
No 250
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.4e-36 Score=315.63 Aligned_cols=247 Identities=29% Similarity=0.465 Sum_probs=200.0
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 355667899999999999984 567899999986442 334467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|.+++.. ..+++..+..++.|+++|+.|||+.+ ++|+||+|+||++++++.++|+|||++......... .
T Consensus 85 ~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~ 158 (277)
T cd06642 85 GGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-R 158 (277)
T ss_pred CCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcchh-h
Confidence 99999998854 36899999999999999999999986 999999999999999999999999999765433221 2
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
....|+..|+|||++.+..++.++|||||||++|||++|+.|+..........+ . .... . .......
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~---~-~~~~-----~----~~~~~~~ 225 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL---I-PKNS-----P----PTLEGQY 225 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh---h-hcCC-----C----CCCCccc
Confidence 234688899999999988899999999999999999999999854432221111 0 0010 0 1111123
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||+.+|++||++.++++.
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 226 SKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 3458899999999999999999999884
No 251
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-37 Score=318.59 Aligned_cols=256 Identities=25% Similarity=0.348 Sum_probs=203.4
Q ss_pred HHHhhcCccccCcccCCCCccEEEeeccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeE
Q 004400 411 IKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 411 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 487 (756)
++...+.|++.+.||+||.+.||++...+.+.||+|++... +......|.+|+..|.++ .|.+||++|+|-..++++
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 34456788999999999999999999988899999887543 444567799999999999 499999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
||||||= ..+|..+|.+.........++.+..|++.|+.+.|.+| |||.||||.|+|+-. |.+||+|||+|..+.
T Consensus 436 YmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred EEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 9999974 55999999876655553488999999999999999997 999999999999875 589999999999877
Q ss_pred ccCcce-eeccccCccCCchHhhhcC-----------CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc
Q 004400 568 EENTHI-STRVAGTIGYMAPEYAMRG-----------HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ 635 (756)
Q Consensus 568 ~~~~~~-~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 635 (756)
.+.+.. ....+||+.||+||.+... +.++++||||+|||+|+|+.|+.||..-. ..|++.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~----n~~aKl---- 582 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII----NQIAKL---- 582 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH----HHHHHH----
Confidence 665544 4457899999999998643 25689999999999999999999994211 122221
Q ss_pred CccccccccCCCCCCCHH-HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 636 GKLMELVDTNPGSNFDKE-QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+.+++-...|+.- ....++++++.|++.||.+||+..|+++.
T Consensus 583 ---~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 583 ---HAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ---HhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 122222221112111 01128999999999999999999999864
No 252
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.1e-36 Score=320.33 Aligned_cols=256 Identities=20% Similarity=0.292 Sum_probs=193.6
Q ss_pred ccCcccCC--CCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 420 TDNNIGEG--GFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 420 ~~~~lg~G--~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
..++||+| +||+||++. ..+|+.||+|++.... ....+.+.+|+++++.++||||++++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 688999998 4678999999986542 223356778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc--
Q 004400 495 ENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT-- 571 (756)
Q Consensus 495 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~-- 571 (756)
++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++|||.+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999753 345899999999999999999999986 99999999999999999999999986543211110
Q ss_pred ----ceeeccccCccCCchHhhhc--CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccccc-
Q 004400 572 ----HISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDT- 644 (756)
Q Consensus 572 ----~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 644 (756)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||............ .........+.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~----~~~~~~~~~~~~ 234 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK----LNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH----hcCCcccccccc
Confidence 01122356778999999976 45899999999999999999999999643322111100 00000000000
Q ss_pred -----------------------------------CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 645 -----------------------------------NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 645 -----------------------------------~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.............+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00000111233468899999999999999999999763
No 253
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.6e-36 Score=336.44 Aligned_cols=263 Identities=18% Similarity=0.212 Sum_probs=195.6
Q ss_pred hHHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCC------CceeeEeeEEE
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQH------PNLVKLYGCCI 482 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~ 482 (756)
++...+++|.+.+.||+|+||+||+|.. .+++.||||+++... .....+..|+++++.++| .++++++++|.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3445678999999999999999999984 568899999986432 223456678877777755 45899999987
Q ss_pred eC-CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCCeEcCCCCCCceEecCCC-------
Q 004400 483 EG-NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE-SRIKVVHRDIKATNVLLDKDL------- 553 (756)
Q Consensus 483 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-g~~~iiH~Dikp~Nill~~~~------- 553 (756)
.+ ...++|||++ +++|.+++... ..+++..+..|+.||+.||+|||++ | ||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccccc
Confidence 65 5788999988 67888888654 4799999999999999999999974 5 99999999999998765
Q ss_pred ---------CEEEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhh
Q 004400 554 ---------NSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFY 624 (756)
Q Consensus 554 ---------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 624 (756)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+...
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred ccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 499999998864322 2234679999999999999999999999999999999999999997655433
Q ss_pred HHHHHHHHHhc-----------CccccccccC--CCCCCC---------------HHHHHHHHHHHHHhhcCCCCCCCCH
Q 004400 625 LLDWALVLKEQ-----------GKLMELVDTN--PGSNFD---------------KEQVMVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 625 ~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~---------------~~~~~~l~~l~~~c~~~~P~~RPt~ 676 (756)
........... .+...+.+.. ...... ......+.+|+.+|++.||++|||+
T Consensus 353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta 432 (467)
T PTZ00284 353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA 432 (467)
T ss_pred HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH
Confidence 22211110000 0000000000 000000 0112357799999999999999999
Q ss_pred HHHHHH
Q 004400 677 SSVLRM 682 (756)
Q Consensus 677 ~ev~~~ 682 (756)
.|+++.
T Consensus 433 ~e~L~H 438 (467)
T PTZ00284 433 RQMTTH 438 (467)
T ss_pred HHHhcC
Confidence 999863
No 254
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.5e-36 Score=325.43 Aligned_cols=240 Identities=25% Similarity=0.332 Sum_probs=187.9
Q ss_pred ccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHHHHHhC---CCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 424 IGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIGMISAL---QHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 424 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
||+|+||+||+|+. .+++.||||++..... .....+..|..++... +||||+++++++.++...++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999994 5689999999865321 2223455677777665 699999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....... ....
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 155 (330)
T cd05586 81 GELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDNK-TTNT 155 (330)
T ss_pred ChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-CccC
Confidence 9999988654 47899999999999999999999987 99999999999999999999999999975332221 1234
Q ss_pred cccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 577 VAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
..||+.|+|||++.+. .++.++|||||||++|||++|+.||...+....... ... +.. .. +.... .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~---i~~-~~~-~~----~~~~~----~ 222 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN---IAF-GKV-RF----PKNVL----S 222 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH---HHc-CCC-CC----CCccC----C
Confidence 6799999999998764 489999999999999999999999976654332211 111 110 11 11112 2
Q ss_pred HHHHHHHHHhhcCCCCCCC----CHHHHHH
Q 004400 656 MVMINVALLCANASPTIRP----SMSSVLR 681 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RP----t~~ev~~ 681 (756)
..+.+++.+|++.+|.+|| ++.++++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 3477899999999999998 4566554
No 255
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.3e-36 Score=308.82 Aligned_cols=246 Identities=29% Similarity=0.487 Sum_probs=198.7
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
++|+..+.||+|+||.||+|.. +++.||+|.+.... ....+.+|+.++++++|||++++++++..+ ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4678889999999999999975 57889999986532 346789999999999999999999998765 4799999999
Q ss_pred CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 496 NNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 496 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
+|+|.+++... ...+++..+..++.|++.||+|||+.| ++||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence 99999999754 346899999999999999999999986 9999999999999999999999999987543221
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....+..|+|||.+.+..++.++|||||||++|||++ |+.||........... . ..+.... +...+
T Consensus 155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~---~-~~~~~~~-----~~~~~--- 222 (254)
T cd05083 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC---V-EKGYRME-----PPEGC--- 222 (254)
T ss_pred CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHH---H-hCCCCCC-----CCCcC---
Confidence 12234568999999988899999999999999999998 9999865544332211 1 1111111 11112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 223 -~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 223 -PADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 2448899999999999999999999998873
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.2e-36 Score=314.59 Aligned_cols=257 Identities=26% Similarity=0.376 Sum_probs=201.1
Q ss_pred hHHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEE-----
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCI----- 482 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~----- 482 (756)
.+..++++|+..+.||+|+||.||+|.. .+++.+|+|.+... ......+.+|+.+++++ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 3456788999999999999999999984 56889999987643 22345688899999999 6999999999984
Q ss_pred eCCeEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEcc
Q 004400 483 EGNQLLLIYEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISD 559 (756)
Q Consensus 483 ~~~~~~lV~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~D 559 (756)
.++..++||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEcc
Confidence 34578999999999999998752 3356889999999999999999999986 99999999999999999999999
Q ss_pred CCccccCcccCcceeeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh
Q 004400 560 FGLAKLDEEENTHISTRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE 634 (756)
Q Consensus 560 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 634 (756)
||+++....... ......|+..|+|||++.. ..++.++||||+||++|||++|+.||........... . .
T Consensus 168 fg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~---~-~ 242 (286)
T cd06638 168 FGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK---I-P 242 (286)
T ss_pred CCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh---c-c
Confidence 999976543222 1223468999999999753 4578899999999999999999999965443221110 0 0
Q ss_pred cCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 635 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.........+ .. ....+.+++.+||+.+|++||++.|+++.
T Consensus 243 ~~~~~~~~~~---~~----~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 243 RNPPPTLHQP---EL----WSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccCCCcccCC---CC----cCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0000111111 11 12348899999999999999999999874
No 257
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.2e-36 Score=317.43 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=200.1
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
++|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36788899999999999999964 689999999865422 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+++++|.++.... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07846 81 FVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 155 (286)
T ss_pred cCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc-
Confidence 99999998876543 35899999999999999999999986 99999999999999999999999999986544332
Q ss_pred eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc-----------Cccc-
Q 004400 573 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ-----------GKLM- 639 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~~~~- 639 (756)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||.................. ....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 2233467899999999875 45788999999999999999999998655432211110000000 0000
Q ss_pred cccccCCCC-----CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 640 ELVDTNPGS-----NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 640 ~~~~~~~~~-----~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....+.... ...+.....+.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000 001122345889999999999999999999876
No 258
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.2e-35 Score=306.57 Aligned_cols=249 Identities=24% Similarity=0.373 Sum_probs=203.5
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|+..+.||+|+||.||++. ..+|+.||+|.+... .....+++.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 47788999999999999998 457899999998643 233346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+.+++|.+++... ...+++..+.+++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 9999999998754 346889999999999999999999986 999999999999999999999999999765433221
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....|++.|+|||++.+..++.++|||||||++|++++|+.||...+....... .. .+.... .+.
T Consensus 158 -~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~---~~-~~~~~~---------~~~ 223 (256)
T cd08218 158 -ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK---II-RGSYPP---------VSS 223 (256)
T ss_pred -hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH---Hh-cCCCCC---------Ccc
Confidence 2234688899999999888899999999999999999999999976544332221 11 111111 111
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.....+.+++.+||+.+|.+||++.+|++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 223348899999999999999999999873
No 259
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=9.9e-36 Score=308.48 Aligned_cols=251 Identities=31% Similarity=0.500 Sum_probs=201.7
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 477789999999999999984 5789999999876533 2567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++... ..+++..+..++.|+++||+|||+.| |+||||+|+||++++++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 9999999998754 35899999999999999999999987 9999999999999999999999999998765433322
Q ss_pred ee---ccccCccCCchHhhhcCC---CCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 574 ST---RVAGTIGYMAPEYAMRGH---LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 574 ~~---~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
.. ...++..|+|||++.... ++.++||||||+++||+++|+.||...+......+. ... ........
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~--~~~-~~~~~~~~---- 229 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH--VGA-GHKPPIPD---- 229 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH--Hhc-CCCCCCCc----
Confidence 22 356788999999998766 889999999999999999999999654321111111 111 11111111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.......+.+++.+||+.+|++||++.+++.
T Consensus 230 ---~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 230 ---SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0111334789999999999999999999865
No 260
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.1e-36 Score=315.93 Aligned_cols=260 Identities=22% Similarity=0.317 Sum_probs=197.2
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|+..+.||+|+||.||+|+. .+|+.||+|.+.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 467788999999999999995 578999999986532 22235678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++ +|.+++......+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~- 155 (284)
T cd07839 81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC- 155 (284)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC-
Confidence 974 788888765667999999999999999999999986 999999999999999999999999999865432221
Q ss_pred eeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccch-hhHHHHHHHHHhcC------ccccccccC
Q 004400 574 STRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDM-FYLLDWALVLKEQG------KLMELVDTN 645 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~ 645 (756)
.....++..|+|||.+.+. .++.++|||||||++|||++|+.|+..... .............. ......+..
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccc
Confidence 2234578899999998764 478999999999999999999998743322 11111110000000 000000000
Q ss_pred CCC---------CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 646 PGS---------NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 646 ~~~---------~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
... ...+.....+.+++.+|++.||.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000 001112345789999999999999999999876
No 261
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.9e-36 Score=307.28 Aligned_cols=248 Identities=30% Similarity=0.468 Sum_probs=201.1
Q ss_pred CccccCcccCCCCccEEEeecc-CCcEEEEEEccccC-----cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS-----KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
+|...+.||+|+||.||+|... +++.|++|.+.... ....+.+.+|+++++.++|+||+++++++.++...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999965 78999999886532 22446788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
+||+++++|.+++... ..+++..+..++.|++.||+|||+.| |+||||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 9999999999998755 36899999999999999999999986 9999999999999999999999999987654332
Q ss_pred cceeeccccCccCCchHhhhcCC-CCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGH-LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
......|+..|+|||.+.... ++.++|+||||+++|++++|+.||......... ...........
T Consensus 157 --~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~--------- 222 (258)
T cd06632 157 --FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV---FKIGRSKELPP--------- 222 (258)
T ss_pred --cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH---HHHHhcccCCC---------
Confidence 223456889999999998766 899999999999999999999999654422111 11111111111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.+......+.+++.+||+.+|.+||++.++++.
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 111123447889999999999999999998763
No 262
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.6e-36 Score=316.57 Aligned_cols=249 Identities=27% Similarity=0.446 Sum_probs=200.4
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
.|.....||+|+||.||++.. .++..||||.+........+.+.+|+.+++.++|+||+++++.+..++..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 344456799999999999984 5688999999866554555678999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++......... ..
T Consensus 103 ~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~ 176 (292)
T cd06658 103 GGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RK 176 (292)
T ss_pred CCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccccc-Cc
Confidence 9999998853 36899999999999999999999986 999999999999999999999999998754332221 22
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
...|+..|+|||...+..++.++||||||+++|||++|+.||........... ... .....+. ......
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~--~~~~~~~------~~~~~~ 245 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR---IRD--NLPPRVK------DSHKVS 245 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHh--cCCCccc------cccccC
Confidence 35689999999999888899999999999999999999999976544322211 100 0001000 011122
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 656 MVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+.+++.+||..+|.+|||+.++++.
T Consensus 246 ~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 246 SVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 347889999999999999999999874
No 263
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.7e-35 Score=307.02 Aligned_cols=250 Identities=26% Similarity=0.345 Sum_probs=197.8
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-----cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-----KQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQL 487 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 487 (756)
++|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.++ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4788899999999999999985 568999999875321 12235788899999999999999999998764 568
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||+++++|.+++... ..+++..+.+++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 8999999999999998754 36889999999999999999999986 9999999999999999999999999998544
Q ss_pred ccCcc--eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 568 EENTH--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 568 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
..... ......|+..|+|||.+.+..++.++|||||||++|||++|+.||.......... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~--------- 225 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF---KIATQP--------- 225 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHH---HHhcCC---------
Confidence 32111 1223568899999999988889999999999999999999999996443221111 011000
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.....+......+.+++.+|+. +|.+||+++||++.
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 226 TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0111233344557888899995 99999999998763
No 264
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.7e-36 Score=313.59 Aligned_cols=263 Identities=21% Similarity=0.326 Sum_probs=204.1
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
++|+..+.||+|+||.||+|... +++.||+|.++.. .......+.+|++++++++|+||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888899999999999999954 6889999998653 23334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|++++.+..+.. ....+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 81 YVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCccc
Confidence 999877766554 3456899999999999999999999986 999999999999999999999999999876554432
Q ss_pred eeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh------------cCccc
Q 004400 573 ISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE------------QGKLM 639 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~------------~~~~~ 639 (756)
......++..|+|||++... .++.++||||||+++|+|++|+.||................. .....
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence 33445688999999999887 789999999999999999999999965543322211111000 00000
Q ss_pred --cccccCCC----CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 --ELVDTNPG----SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 --~~~~~~~~----~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+....... ..++......+.+++.+||..+|++||+++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000000 00111124568999999999999999999998763
No 265
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.8e-36 Score=313.32 Aligned_cols=252 Identities=25% Similarity=0.426 Sum_probs=200.3
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|+..+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999954 7899999988654 223346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 494 LENNSLARALFEH--RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 494 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
+++++|..++... ...+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999999988653 236899999999999999999999742 49999999999999999999999999987543221
Q ss_pred ceeeccccCccCCchHhhhcC------CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 572 HISTRVAGTIGYMAPEYAMRG------HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
.....|+..|+|||.+.+. .++.++|||||||++|+|++|+.||................ ....
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~------- 227 (286)
T cd06622 158 --AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIV-DGDP------- 227 (286)
T ss_pred --cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHh-hcCC-------
Confidence 2234578899999998543 35889999999999999999999996543322221111111 1111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+......+.+++.+||+.+|++||++.++++.
T Consensus 228 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 228 --PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred --CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11122234458899999999999999999999874
No 266
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.7e-35 Score=305.67 Aligned_cols=255 Identities=29% Similarity=0.462 Sum_probs=203.8
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|+..+.||.|+||+||+|.. .++..+|+|++.... ......+.+|+++++.++|+||+++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4688899999999999999994 468899999986532 23457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 494 LENNSLARALFEH--RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 494 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
+++++|.+++... ...+++..+..++.|++.||+|||+.| |+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999999999753 246899999999999999999999986 99999999999999999999999999876544322
Q ss_pred c---eeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 572 H---ISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 572 ~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
. ......|+..|+|||++... .++.++|||||||++|||++|+.||.......... ..... .. .......
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~--~~~~~--~~-~~~~~~~- 231 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLM--LTLQN--DP-PSLETGA- 231 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHH--HHhcC--CC-CCcCCcc-
Confidence 2 22335689999999999877 78999999999999999999999996544322111 00101 00 0000000
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
........+.+++.+||+.+|++||++.++++
T Consensus 232 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 232 --DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 01122345889999999999999999999976
No 267
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.2e-35 Score=308.62 Aligned_cols=252 Identities=25% Similarity=0.425 Sum_probs=201.8
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc------ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK------QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
+|+..+.||+|+||.||+|. ..+++.||+|.+..... ...+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47788999999999999998 46789999999865321 124678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccCCccccCcc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDEE 568 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGla~~~~~ 568 (756)
|+||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++ .+||+|||.+.....
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 99999999999998754 36899999999999999999999996 99999999999998776 599999999976543
Q ss_pred cCcc---eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 569 ENTH---ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 569 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
.... ......|+..|+|||.+.+..++.++||||+|+++|++++|+.||...................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 227 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT--------- 227 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC---------
Confidence 3211 1223568899999999988889999999999999999999999995443322211111111100
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.....+......+.+++.+|++.+|.+||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 011222333455889999999999999999999875
No 268
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-35 Score=315.26 Aligned_cols=255 Identities=21% Similarity=0.302 Sum_probs=202.2
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 3688889999999999999995 467899999986542 223456789999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC-
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN- 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~- 570 (756)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 999999999999655 46899999999999999999999986 9999999999999999999999999987421100
Q ss_pred -------------cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc
Q 004400 571 -------------THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK 637 (756)
Q Consensus 571 -------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 637 (756)
........|+..|+|||.+....++.++|||||||++||+++|+.||.+........ .... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~---~~~~-~~ 232 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG---QVIS-DD 232 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHh-cc
Confidence 001122457889999999988889999999999999999999999997654332221 1111 11
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 638 LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
...+.....++ ..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 233 ---~~~~~~~~~~~----~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 233 ---IEWPEGDEALP----ADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ---cCCCCccccCC----HHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 01111111122 347899999999999999998777777663
No 269
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.9e-36 Score=314.83 Aligned_cols=248 Identities=25% Similarity=0.405 Sum_probs=200.5
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
|+....||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 33445799999999999984 57899999998665444556788999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
++|.+++.. ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........ ....
T Consensus 103 ~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~ 176 (297)
T cd06659 103 GALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKS 176 (297)
T ss_pred CCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc-cccc
Confidence 999987754 36899999999999999999999986 99999999999999999999999999875443222 1233
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..|+..|+|||++.+..++.++|||||||++|||++|+.||...+........ .. ..... .. ....+ ..
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~---~~-~~~~~--~~-~~~~~----~~ 245 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL---RD-SPPPK--LK-NAHKI----SP 245 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hc-cCCCC--cc-ccCCC----CH
Confidence 56899999999999888999999999999999999999999655433322111 11 10000 00 00112 23
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 657 VMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.+.+++.+|++.+|++||++.++++.
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 47889999999999999999999884
No 270
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-35 Score=313.14 Aligned_cols=250 Identities=28% Similarity=0.469 Sum_probs=204.5
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
++|...+.||+|+||.||+|. ..+++.||+|.+........+.+.+|+.++++++||||++++++|..++..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 578889999999999999998 4578899999986554455577899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|.+++.+. .+++..+..++.|++.||+|||+.| ++||||||+||+++.++.+||+|||++......... .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~-~ 172 (293)
T cd06647 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-R 172 (293)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccccc-c
Confidence 999999998643 5789999999999999999999986 999999999999999999999999998755433222 2
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
....|++.|+|||.+....++.++||||||+++|++++|+.||...+........ .. ...+....+...
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~---~~--------~~~~~~~~~~~~ 241 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---AT--------NGTPELQNPEKL 241 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh---hc--------CCCCCCCCcccc
Confidence 2346889999999998888999999999999999999999999655432211100 00 000111111223
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||+.+|++||++.+++..
T Consensus 242 ~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 242 SAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3458899999999999999999999865
No 271
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.3e-35 Score=307.38 Aligned_cols=252 Identities=27% Similarity=0.442 Sum_probs=202.3
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE--GNQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 491 (756)
+|+..+.||.|+||.||+|. ..+++.||+|.+... .....+.+..|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 47788999999999999998 457889999998643 23334578889999999999999999998864 45689999
Q ss_pred EecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 492 EYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGES--RIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 492 e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~g--~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
||+++++|.+++... ...+++..++.++.|++.||+|||..| ..+++||||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999743 457899999999999999999999332 235999999999999999999999999999876
Q ss_pred cccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
...... .....|+..|+|||.+....++.++||||||+++|+|++|+.||...+........ ..+..
T Consensus 161 ~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~-------- 227 (265)
T cd08217 161 GHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI----KEGKF-------- 227 (265)
T ss_pred cCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH----hcCCC--------
Confidence 543321 23346899999999999888999999999999999999999999765532222111 11111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+......+.+++.+|++.+|++||++.+|++.
T Consensus 228 -~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 -RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11222233458899999999999999999999874
No 272
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.5e-36 Score=318.84 Aligned_cols=193 Identities=27% Similarity=0.446 Sum_probs=159.5
Q ss_pred cCcccCCCCccEEEeecc---CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEe--CCeEEEEEEecC
Q 004400 421 DNNIGEGGFGPVYKGLLA---DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE--GNQLLLIYEYLE 495 (756)
Q Consensus 421 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~ 495 (756)
...||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 358999999999999854 45789999986532 23567899999999999999999999854 567899999987
Q ss_pred CCCHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe----cCCCCEEEccCCcc
Q 004400 496 NNSLARALFEH--------RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL----DKDLNSKISDFGLA 563 (756)
Q Consensus 496 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill----~~~~~~kl~DFGla 563 (756)
+ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 677776421 235889999999999999999999986 9999999999999 56678999999999
Q ss_pred ccCcccCcc--eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCc
Q 004400 564 KLDEEENTH--ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTK 619 (756)
Q Consensus 564 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~ 619 (756)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 865443221 1234568999999999876 4589999999999999999999999954
No 273
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.3e-35 Score=313.47 Aligned_cols=261 Identities=23% Similarity=0.332 Sum_probs=201.0
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcc-----cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQ-----GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
+|+..+.||+|+||.||+|.. .+++.||||.+...... ....+..|++++++++|+||+++++++.+++..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 467788999999999999995 57899999999754322 335677899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+ +|+|.+++......+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 89999999765457999999999999999999999997 9999999999999999999999999998654432
Q ss_pred cceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc---------Ccccc
Q 004400 571 THISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ---------GKLME 640 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~---------~~~~~ 640 (756)
.. .....+++.|+|||.+.+ ..++.++|||||||++|||++|..||...+.............. .....
T Consensus 157 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 157 RK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred cc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 21 222356788999999865 45789999999999999999998777655443322111100000 00000
Q ss_pred ccccCCCCCC-----CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 641 LVDTNPGSNF-----DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 641 ~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.......... .......+.+++.+||+.+|++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000001 11223468899999999999999999999874
No 274
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.9e-36 Score=323.34 Aligned_cols=259 Identities=22% Similarity=0.347 Sum_probs=196.5
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEG------ 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 484 (756)
..++|...+.||+|+||.||+|. ..+++.||||.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 34678899999999999999998 4578899999986532 22345678899999999999999999988643
Q ss_pred CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 485 NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
...+++++++ +++|.+++.. ..+++..+..++.||+.||+|||+.| |+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccce
Confidence 4578999988 7799887743 36899999999999999999999997 9999999999999999999999999998
Q ss_pred cCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc------
Q 004400 565 LDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK------ 637 (756)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 637 (756)
..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...+................
T Consensus 167 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 167 QADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 65432 233568999999999877 5689999999999999999999999966543322211111000000
Q ss_pred --------cccccccCCCCCC---CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 --------LMELVDTNPGSNF---DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 --------~~~~~~~~~~~~~---~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+...+.... .......+.+++.+|++.||.+|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000 00011247799999999999999999999864
No 275
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.3e-35 Score=307.34 Aligned_cols=254 Identities=27% Similarity=0.436 Sum_probs=199.2
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc----------ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK----------QGNREFINEIGMISALQHPNLVKLYGCCIEGN 485 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 485 (756)
+|...+.||+|+||.||+|. ..+|+.||+|.+..... ...+.+.+|+.+++.++|||++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 46778899999999999998 45789999998753211 01245788999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccccc
Confidence 999999999999999999765 47899999999999999999999986 99999999999999999999999999976
Q ss_pred CcccCcc-eeeccccCccCCchHhhhcCC--CCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccc
Q 004400 566 DEEENTH-ISTRVAGTIGYMAPEYAMRGH--LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV 642 (756)
Q Consensus 566 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (756)
....... ......|+..|+|||.+.... ++.++||||||+++||+++|+.||...+...... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~- 233 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF---KLGNKRSAPPI- 233 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH---HhhccccCCcC-
Confidence 5432211 123356889999999987654 8899999999999999999999995443321110 00011111111
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 643 DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 643 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. .........+.+++.+||..+|++||++.+|++.
T Consensus 234 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 234 PP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred Cc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11 1111223458899999999999999999999864
No 276
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.8e-36 Score=320.57 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=203.7
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCC-C-----CceeeEeeEEEeCCeEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-H-----PNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 489 (756)
+|.+.+.||+|+||.|.+|. ..+++.||||+++.. +.-..+-..|+.+|..++ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 78899999999999999999 677999999999764 333455577999999997 4 489999999999999999
Q ss_pred EEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC--CEEEccCCccccC
Q 004400 490 IYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL--NSKISDFGLAKLD 566 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~--~~kl~DFGla~~~ 566 (756)
|+|.++. +|.+++..+ ...++...++.++.||+.||.+||+.+ |||+||||+||||.+-. .+||+|||.|...
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999865 999999843 456899999999999999999999986 99999999999997543 5999999999865
Q ss_pred cccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh---------cCc
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE---------QGK 637 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~---------~~~ 637 (756)
.+... ...-+..|.|||++.+..|+.+.||||||||++||++|.+-|.++++.+.+........ ..+
T Consensus 342 ~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~ 417 (586)
T KOG0667|consen 342 SQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK 417 (586)
T ss_pred CCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 54322 34557789999999999999999999999999999999888888887665443322211 000
Q ss_pred ccccccc----------------------------------CC-----CC-CCCHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 004400 638 LMELVDT----------------------------------NP-----GS-NFDKEQVMVMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 638 ~~~~~~~----------------------------------~~-----~~-~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ 677 (756)
....++. .+ .. .........+++++++|+..||.+|+|..
T Consensus 418 ~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~ 497 (586)
T KOG0667|consen 418 AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA 497 (586)
T ss_pred cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence 0000000 00 00 01113344789999999999999999999
Q ss_pred HHHHH
Q 004400 678 SVLRM 682 (756)
Q Consensus 678 ev~~~ 682 (756)
|.++.
T Consensus 498 qal~H 502 (586)
T KOG0667|consen 498 QALNH 502 (586)
T ss_pred HHhcC
Confidence 99765
No 277
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.8e-35 Score=311.42 Aligned_cols=258 Identities=27% Similarity=0.383 Sum_probs=202.6
Q ss_pred hhHHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC--
Q 004400 409 LQIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEG-- 484 (756)
Q Consensus 409 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-- 484 (756)
.++..++++|...+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.+++++ +|||+++++++|...
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 34556788999999999999999999995 578899999986532 2345678899999999 899999999998754
Q ss_pred ---CeEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEc
Q 004400 485 ---NQLLLIYEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKIS 558 (756)
Q Consensus 485 ---~~~~lV~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~ 558 (756)
+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEe
Confidence 358999999999999998863 3457899999999999999999999986 9999999999999999999999
Q ss_pred cCCccccCcccCcceeeccccCccCCchHhhhcC-----CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHH
Q 004400 559 DFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRG-----HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLK 633 (756)
Q Consensus 559 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 633 (756)
|||+++........ .....|+..|+|||.+... .++.++|||||||++|||++|+.||........... .
T Consensus 171 dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~---~- 245 (291)
T cd06639 171 DFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK---I- 245 (291)
T ss_pred ecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH---H-
Confidence 99998865432211 2234688999999998643 368899999999999999999999965543221110 0
Q ss_pred hcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 634 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.........+ +......+.+++.+||+.+|++||++.|+++.
T Consensus 246 ~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 246 PRNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred hcCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0111111111 11223358899999999999999999999763
No 278
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.3e-35 Score=307.93 Aligned_cols=251 Identities=24% Similarity=0.409 Sum_probs=203.5
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999954 78999999987653 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHG-ESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++++|.+++......+++..+..++.|++.||+|||+ .+ ++||||||+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 99999999998665688999999999999999999999 75 999999999999999999999999998755432221
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccch--hhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM--FYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
...|+..|+|||.+.+..++.++||||||+++|+|++|+.||..... ....+........ .. ...
T Consensus 158 ---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~---------~~~ 224 (265)
T cd06605 158 ---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PP---------PRL 224 (265)
T ss_pred ---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CC---------CCC
Confidence 25688999999999988999999999999999999999999955421 1111111111111 00 011
Q ss_pred CHH-HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKE-QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~-~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+.. ....+.+++.+||..+|++||++.++++.
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 225 PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 111 33448899999999999999999999764
No 279
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.6e-35 Score=315.65 Aligned_cols=249 Identities=24% Similarity=0.293 Sum_probs=198.9
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcc---cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQ---GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|+..+.||+|+||.||+|... +++.||+|.+...... ..+.+..|+++++.++||||+++++.+.++...++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999954 5899999998754322 3456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 492 EYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
||+.+++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999998743 357899999999999999999999986 9999999999999999999999999987543211
Q ss_pred cc----------------------------eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccch
Q 004400 571 TH----------------------------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM 622 (756)
Q Consensus 571 ~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~ 622 (756)
.. ......||..|+|||++.+..++.++||||||+++|+|++|+.||...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 11134688999999999988899999999999999999999999965543
Q ss_pred hhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q 004400 623 FYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSV 679 (756)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev 679 (756)
..... ....... .. .........+.+++.+|++.+|++||++...
T Consensus 238 ~~~~~--~~~~~~~---~~-------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~ 282 (316)
T cd05574 238 DETFS--NILKKEV---TF-------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRG 282 (316)
T ss_pred HHHHH--HHhcCCc---cC-------CCccccCHHHHHHHHHHccCCHhHCCCchhh
Confidence 32211 1110000 00 0011133458999999999999999994333
No 280
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.6e-35 Score=309.13 Aligned_cols=248 Identities=26% Similarity=0.426 Sum_probs=201.7
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
.|...+.||+|++|.||+|.. .+++.|++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 344557999999999999984 5789999999865544455678899999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+++|.+++.. ..+++..+..++.|++.||+|||+.| |+||||+|+||+++.++.++|+|||.+........ ...
T Consensus 100 ~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~ 173 (285)
T cd06648 100 GGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRK 173 (285)
T ss_pred CCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc-ccc
Confidence 9999999876 46899999999999999999999987 99999999999999999999999999875443222 123
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||...+...... ..... ...... ......
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~---~~~~~-~~~~~~-------~~~~~~ 242 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK---RIRDN-LPPKLK-------NLHKVS 242 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH---HHHhc-CCCCCc-------ccccCC
Confidence 3568999999999988889999999999999999999999997655432221 11111 100000 011122
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 656 MVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
..+.+++.+||+.+|++||++.++++
T Consensus 243 ~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 243 PRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHcc
Confidence 35889999999999999999999986
No 281
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.2e-35 Score=308.70 Aligned_cols=254 Identities=29% Similarity=0.499 Sum_probs=207.7
Q ss_pred HhhcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
..++.|+..+.||+|+||.||+|... +++.|++|.+..... ..+.+.+|+++++.++|+|++++++++..++..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 45677888999999999999999965 789999999976544 4577899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++++|.+++......+++..+..++.|++.||+|||+.| |+|+||+|+||+++.++.++|+|||++........
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999999876557999999999999999999999986 99999999999999999999999999875443221
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||............ . ......... .
T Consensus 172 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~---~-~~~~~~~~~-------~ 239 (286)
T cd06614 172 -KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI---T-TKGIPPLKN-------P 239 (286)
T ss_pred -hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---H-hcCCCCCcc-------h
Confidence 122345788999999998888999999999999999999999999655443222111 1 111111100 1
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
......+.+++.+||+.+|.+||++.++++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1123358899999999999999999999763
No 282
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.1e-35 Score=307.71 Aligned_cols=253 Identities=24% Similarity=0.417 Sum_probs=198.7
Q ss_pred ccccCcccCCCCccEEEeecc----CCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC------
Q 004400 418 FATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGN------ 485 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 485 (756)
|...+.||+|+||.||+|... ++..||||.+.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456789999999999999843 36889999986542 234567889999999999999999999986542
Q ss_pred eEEEEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 486 QLLLIYEYLENNSLARALFEH-----RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
..++++||+.+|+|.+++... ...+++..+.+++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 347899999999999887532 225789999999999999999999986 999999999999999999999999
Q ss_pred CccccCcccCcc-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCcc
Q 004400 561 GLAKLDEEENTH-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKL 638 (756)
Q Consensus 561 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (756)
|+++........ ......++..|++||.+....++.++|||||||++|||++ |+.||...+......+.. .....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~~~~ 234 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI---KGNRL 234 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHH---cCCcC
Confidence 999865432211 1222345678999999998889999999999999999999 888886655443332211 11110
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 639 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
. . +......+.+++.+||+.+|++||++.++++.|+++
T Consensus 235 -~-----~----~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 235 -K-----Q----PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -C-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0 111223588999999999999999999999999854
No 283
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.2e-35 Score=312.59 Aligned_cols=261 Identities=23% Similarity=0.346 Sum_probs=197.5
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++|+||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999954 789999999865432 2234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+.+ +|.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~- 159 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT- 159 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCcc-
Confidence 985 999998876667899999999999999999999986 999999999999999999999999998754322111
Q ss_pred eeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccch-hhHHHHHHHHHhc---Ccccc--------
Q 004400 574 STRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDM-FYLLDWALVLKEQ---GKLME-------- 640 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~-~~~~~~~~~~~~~---~~~~~-------- 640 (756)
.....++..|+|||++.+ ..++.++||||+|+++|||++|+.||..... ............. .....
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 122346889999999875 4588999999999999999999999955431 1111100000000 00000
Q ss_pred -----ccccCC-CCCC-CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 641 -----LVDTNP-GSNF-DKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 641 -----~~~~~~-~~~~-~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
...... .... .......+.+++.+|++.+|++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000 0000 0001145778999999999999999999875
No 284
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.3e-35 Score=307.81 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=200.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 491 (756)
++|+..+.||.|++|.||+|.. .+++.+|+|.+..... .....+.+|++++++++||||++++++|.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3678889999999999999995 5688999999875422 3456789999999999999999999998654 4789999
Q ss_pred EecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 492 EYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 492 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
||+++++|.+++.. ....+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988752 3456889999999999999999999986 99999999999999999999999999875433
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccch--hhHHHHHHHHHhcCccccccccCC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM--FYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
... ....++..|+|||.+.+..++.++||||+||++|+|++|+.||..... ....+....... .......+ .+
T Consensus 158 ~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 232 (287)
T cd06621 158 SLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-MPNPELKD-EP 232 (287)
T ss_pred ccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-CCchhhcc-CC
Confidence 221 234578899999999988999999999999999999999999965421 111111111111 11111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. .......+.+++.+||+.+|++|||+.|+++.
T Consensus 233 ~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 233 GN--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CC--CCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 10 01123458899999999999999999999874
No 285
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2e-35 Score=307.99 Aligned_cols=254 Identities=28% Similarity=0.381 Sum_probs=201.2
Q ss_pred HhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCC-----
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGN----- 485 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~----- 485 (756)
.++++|+..+.||+|++|.||+|.. .+++.+++|.+..... ....+.+|+.+++++ +|+||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4578999999999999999999995 4678999999865433 346789999999999 7999999999997644
Q ss_pred -eEEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCC
Q 004400 486 -QLLLIYEYLENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFG 561 (756)
Q Consensus 486 -~~~lV~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFG 561 (756)
..++||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 489999999999999988642 357899999999999999999999986 9999999999999999999999999
Q ss_pred ccccCcccCcceeeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC
Q 004400 562 LAKLDEEENTHISTRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 636 (756)
Q Consensus 562 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 636 (756)
++........ ......|+..|+|||++.. ..++.++|||||||++|+|++|+.||.......... .... .
T Consensus 159 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~-~ 233 (275)
T cd06608 159 VSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF---KIPR-N 233 (275)
T ss_pred cceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH---Hhhc-c
Confidence 9875443222 1233568999999998753 347789999999999999999999996543221111 0000 0
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 637 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... ...+......+.+++.+||..||++|||+.++++.
T Consensus 234 ~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 234 PPPT-------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred CCCC-------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0000 11112234458899999999999999999999863
No 286
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.7e-35 Score=312.55 Aligned_cols=248 Identities=30% Similarity=0.458 Sum_probs=199.9
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
...|...+.||+|+||.||+|.. .+++.||+|.+..... ...+++.+|+++++.++||||++++++|.+++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 35688889999999999999985 4789999998864322 2335688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+. |++.+.+......+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 99997 5777777655567999999999999999999999986 999999999999999999999999998754432
Q ss_pred cceeeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 571 THISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
....|+..|+|||++. .+.++.++||||||+++|||++|+.||...+....... .. .....
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~---~~-~~~~~-------- 232 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IA-QNDSP-------- 232 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH---Hh-cCCCC--------
Confidence 2346788999999874 35688999999999999999999999966544332211 10 01100
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
..........+.+++.+||+.+|++||++.+|++..
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 233 TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 001112334588999999999999999999998753
No 287
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=309.32 Aligned_cols=249 Identities=25% Similarity=0.328 Sum_probs=203.4
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
..+.|..-++||+||||.||-++ ..+|+.||.|.+.++ ...+......|-++|.+++.++||.+-.+|+.++.+++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 34678889999999999999998 557999999998664 34455677889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 490 IYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
|+..|.||+|.-+|.+.+ ..+++..+..++.+|+.||++||.++ ||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999998554 46999999999999999999999986 99999999999999999999999999987766
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
..... ..+||.+|||||++.+..|+...|.||+||++|||+.|+.||....... .|. ++...+.. ...
T Consensus 340 g~~~~--~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--k~e-------Evdrr~~~-~~~ 407 (591)
T KOG0986|consen 340 GKPIR--GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--KRE-------EVDRRTLE-DPE 407 (591)
T ss_pred CCccc--cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh--hHH-------HHHHHHhc-chh
Confidence 54442 2379999999999999999999999999999999999999995432211 110 00000000 112
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ 677 (756)
.++.....+...+....++.||++|---.
T Consensus 408 ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 408 EYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 23334444578888899999999997433
No 288
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.5e-35 Score=310.62 Aligned_cols=261 Identities=23% Similarity=0.322 Sum_probs=200.6
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV 490 (756)
++|+..+.||+|+||.||+|... +++.+|+|.++.... .....+.+|+.++++++||||+++++++..+ ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 47888899999999999999954 688999999865422 2234567899999999999999999999887 899999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+++ +|.+++......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999985 999988766667999999999999999999999987 9999999999999999999999999998655432
Q ss_pred cceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh---------------
Q 004400 571 THISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE--------------- 634 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~--------------- 634 (756)
.. .....++..|+|||.+.+. .++.++|+||+|+++|||++|+.||.................
T Consensus 161 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 161 KP-YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred cc-cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 21 1234578899999998764 468999999999999999999999965543322211110000
Q ss_pred --cCccccccccCCCCCCCHH-HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 635 --QGKLMELVDTNPGSNFDKE-QVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 635 --~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
...............++.. ....+.+++.+|++.+|++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000000111111111 2445889999999999999999999975
No 289
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.5e-35 Score=303.92 Aligned_cols=248 Identities=26% Similarity=0.410 Sum_probs=201.4
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|+||.||+|.. .+++.+|+|.+... .......+.+|+++++.++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999984 57889999998654 223456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccCCccccCcccCc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDEEENT 571 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGla~~~~~~~~ 571 (756)
+++++|.+++... ...+++..+.+++.|++.||+|||+++ ++||||||+||++++++ .+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 9999999999754 345899999999999999999999986 99999999999998654 589999999986543321
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...+........ .. ....... ..+
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~-----~~~- 225 (256)
T cd08220 158 --AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKI---MS-GTFAPIS-----DRY- 225 (256)
T ss_pred --ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHH---Hh-cCCCCCC-----CCc-
Confidence 22356889999999998888999999999999999999999999665543322211 11 1111111 112
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||+.+|.+|||+.|+++.
T Consensus 226 ---~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 226 ---SPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ---CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 2348899999999999999999999864
No 290
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.5e-35 Score=306.85 Aligned_cols=248 Identities=28% Similarity=0.463 Sum_probs=200.1
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEcccc-CcccHHHHHHHHHHHHhCC---CCceeeEeeEEEeCCeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQ---HPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~ 491 (756)
.|+..+.||+|+||.||+|.. .+++.||+|.+... ......++.+|+.++++++ |||++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467778999999999999994 67899999998654 3334567889999999997 999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++++|.+++... .+++..+..++.|++.||+|||+.| |+||||+|+||+++.++.++|+|||++........
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 999999999988543 7899999999999999999999987 99999999999999999999999999986654332
Q ss_pred ceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
. .....|+..|+|||.+.++ .++.++|||||||++|+|++|+.||..........+ . ....... ....
T Consensus 157 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~---~-~~~~~~~-----~~~~- 225 (277)
T cd06917 157 K-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMML---I-PKSKPPR-----LEDN- 225 (277)
T ss_pred c-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhc---c-ccCCCCC-----CCcc-
Confidence 2 2334689999999998754 478999999999999999999999965543221111 0 0010001 1110
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.....+.+++.+||+.+|++||++.++++.
T Consensus 226 --~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 226 --GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred --cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 123358899999999999999999999764
No 291
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=297.74 Aligned_cols=242 Identities=26% Similarity=0.335 Sum_probs=201.5
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
..++|+..++||+|.||+|..++ ..+++.+|+|++++..- +....-..|-++|+..+||.+..+-..|+..+.+|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 34688899999999999999998 66899999999987532 233445678999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||..||.|.-+|... ..+++...+.+-..|..||.|||+++ ||.||+|.+|.|+|.+|++||+|||+++..- .
T Consensus 246 VMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-~ 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI-K 320 (516)
T ss_pred EEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc-c
Confidence 99999999999988654 47899999999999999999999985 9999999999999999999999999998422 2
Q ss_pred CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
......+++||+.|+|||++....|+.++|.|.+||++|||++|+.||+..+...++.... .+ +- .
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl--~e--------d~----k 386 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL--ME--------DL----K 386 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH--hh--------hc----c
Confidence 2233567899999999999999999999999999999999999999998877655543221 11 11 1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCC
Q 004400 650 FDKEQVMVMINVALLCANASPTIRP 674 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RP 674 (756)
++.....+...++...+..||.+|-
T Consensus 387 FPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 387 FPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred CCccCCHHHHHHHHHHhhcChHhhc
Confidence 2222223366777888999999996
No 292
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.7e-35 Score=309.86 Aligned_cols=244 Identities=27% Similarity=0.404 Sum_probs=200.0
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 3688889999999999999995 468999999986532 233466889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++++|.+++... ..+++..+..++.|++.||+|||+.| |+||||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 999999999999755 47899999999999999999999986 999999999999999999999999999865443
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
.....|++.|+|||.+.+...+.++||||||+++|+|++|+.||...+....... .. .+.. . ++
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~--~~~~-~---------~~ 218 (290)
T cd05580 155 --TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEK--IL--EGKV-R---------FP 218 (290)
T ss_pred --CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--Hh--cCCc-c---------CC
Confidence 2335689999999999888899999999999999999999999966553221111 11 1110 0 11
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRP-----SMSSVLR 681 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RP-----t~~ev~~ 681 (756)
......+.+++.+||..+|.+|| +++|+++
T Consensus 219 ~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 219 SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 11134588999999999999999 5666543
No 293
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=320.03 Aligned_cols=252 Identities=24% Similarity=0.411 Sum_probs=207.1
Q ss_pred cCccccCcccCCCCccEEEeeccCCc-EEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGT-AIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
+-|.++-.||-|+||.||+|..++.. ..|.|++..++....++|+-|++||+.+.||+||++++.|..++.+|+..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 45677788999999999999966544 45678888777778889999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
.||-.+..+.+-+..+.+.++..+++|++.||.|||++. |||||||+.|||++-+|.++|+|||.+...... ....
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~qkR 187 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQKR 187 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhH-Hhhh
Confidence 999999999888889999999999999999999999984 999999999999999999999999998643221 1223
Q ss_pred eccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 575 TRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
..+.||+.|||||+.+. ..|+.++||||||+.+.||..+.+|-..-+.+..+-. +. ..+.+.++-
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK--ia--KSePPTLlq------ 257 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK--IA--KSEPPTLLQ------ 257 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH--Hh--hcCCCcccC------
Confidence 45889999999999864 5799999999999999999999999765554332210 11 111111111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+......+.+++.+|+..+|..||++.++++.
T Consensus 258 -PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 258 -PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred -cchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 22334458999999999999999999999654
No 294
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.8e-35 Score=309.81 Aligned_cols=255 Identities=28% Similarity=0.419 Sum_probs=199.9
Q ss_pred hHHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEe----
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIE---- 483 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 483 (756)
++..+.+.|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+..|+.+++++ +|+||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 10 ALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP 88 (282)
T ss_pred hhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence 3445678899999999999999999994 578899999986542 3345688899999998 79999999999863
Q ss_pred --CCeEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 484 --GNQLLLIYEYLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 484 --~~~~~lV~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+||
T Consensus 89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l~df 165 (282)
T cd06636 89 GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKLVDF 165 (282)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeC
Confidence 46789999999999999998753 345888899999999999999999986 999999999999999999999999
Q ss_pred CccccCcccCcceeeccccCccCCchHhhh-----cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc
Q 004400 561 GLAKLDEEENTHISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ 635 (756)
Q Consensus 561 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 635 (756)
|++......... .....|+..|+|||.+. ...++.++|||||||++|||++|+.||.......... ....
T Consensus 166 g~~~~~~~~~~~-~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~---~~~~- 240 (282)
T cd06636 166 GVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF---LIPR- 240 (282)
T ss_pred cchhhhhccccC-CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh---hHhh-
Confidence 998754432211 23356899999999986 3467889999999999999999999996543221110 0000
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 636 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
. . ............+.+++.+||+.+|.+||++.|+++
T Consensus 241 ~-----~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 241 N-----P---PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred C-----C---CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 0 000001112335889999999999999999999875
No 295
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.7e-35 Score=310.07 Aligned_cols=263 Identities=23% Similarity=0.338 Sum_probs=198.1
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++++|...+.||+|+||.||+|. ..+++.||+|.+..... .....+.+|+++++.++|+||+++++++.+++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 45789999999999999999998 45789999999865432 22346788999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+. +++.+++......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 9996 6777777655556888999999999999999999986 99999999999999999999999999975433222
Q ss_pred ceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHh-------------cC
Q 004400 572 HISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKE-------------QG 636 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-~~~~~~~~~~~-------------~~ 636 (756)
. .....++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ........... ..
T Consensus 159 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 159 T-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred C-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccc
Confidence 1 1234578899999998754 5788999999999999999999999644321 11110000000 00
Q ss_pred ccccccccCCCCCCC-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 637 KLMELVDTNPGSNFD-----KEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 637 ~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
............... ......+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000 001235788999999999999999999865
No 296
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4e-35 Score=306.40 Aligned_cols=247 Identities=29% Similarity=0.460 Sum_probs=200.6
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
-|...+.||+|+||.||+|.. .++..||+|.+.... ......+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 356778999999999999984 578899999876432 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++++|.+++.. ..+++..+..++.|++.|++|||+.+ ++|+||||+||+++.++.++|+|||++......... .
T Consensus 85 ~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~-~ 158 (277)
T cd06641 85 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-R 158 (277)
T ss_pred CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchhh-h
Confidence 99999998854 36899999999999999999999986 999999999999999999999999998765432221 2
Q ss_pred eccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 575 TRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
....|+..|+|||.+.+..++.++|||||||++|+|++|..||........... . ...... ......
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~---~-~~~~~~---------~~~~~~ 225 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL---I-PKNNPP---------TLEGNY 225 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH---H-hcCCCC---------CCCccc
Confidence 234688899999999888899999999999999999999999965443222111 1 111110 111122
Q ss_pred HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 655 VMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||+.+|.+||++.++++.
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 226 SKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 3448899999999999999999999984
No 297
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=6.5e-35 Score=299.64 Aligned_cols=250 Identities=30% Similarity=0.485 Sum_probs=206.5
Q ss_pred CccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
+|...+.||+|++|.||+|... +++.+++|++..........+.+|++++++++|+|++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4677889999999999999964 789999999977654456789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+++|.+++......+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||.+........ ..
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~ 155 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RN 155 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--cc
Confidence 99999999766568999999999999999999999986 99999999999999999999999999986654332 23
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
...|+..|+|||.+....++.++||||||+++|+|++|+.||...+........ .. ........ .....
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~-~~~~~~~~-------~~~~~ 224 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKI---AT-NGPPGLRN-------PEKWS 224 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---Hh-cCCCCcCc-------ccccC
Confidence 456889999999998888999999999999999999999999665432222111 11 11111111 11113
Q ss_pred HHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 656 MVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+.+++.+||+.+|++|||+.++++.
T Consensus 225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 225 DEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 458899999999999999999998763
No 298
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2e-35 Score=309.65 Aligned_cols=250 Identities=26% Similarity=0.428 Sum_probs=193.0
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC-cccHHHHHHHHHH-HHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS-KQGNREFINEIGM-ISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
++|+..+.||+|+||.||+|+. .+|+.||+|++.... ......+..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 4688889999999999999995 479999999987542 2233456667665 666789999999999999999999999
Q ss_pred ecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 493 YLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 493 ~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|++ |+|.+++.. ....+++..+..++.|++.||+|||++. +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 688877753 3346899999999999999999999862 3999999999999999999999999999865432
Q ss_pred CcceeeccccCccCCchHhhhc----CCCCcccchhhHHHHHHHHHhCCCCCCccc-hhhHHHHHHHHHhcCcccccccc
Q 004400 570 NTHISTRVAGTIGYMAPEYAMR----GHLTEKADVYSFGIVALEIVSGRSNVTKED-MFYLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slGv~l~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 644 (756)
.. .....|+..|+|||.+.+ ..++.++|+|||||++|||++|+.||.... ....... ... ......
T Consensus 158 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~-~~~~~~--- 228 (283)
T cd06617 158 VA--KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ---VVE-EPSPQL--- 228 (283)
T ss_pred cc--cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH---HHh-cCCCCC---
Confidence 21 223468899999998864 456889999999999999999999985322 1111110 001 111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+...+ ...+.+++.+||..+|.+||++.++++.
T Consensus 229 -~~~~~----~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 229 -PAEKF----SPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred -Ccccc----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11112 2348899999999999999999999763
No 299
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.1e-35 Score=310.62 Aligned_cols=249 Identities=28% Similarity=0.438 Sum_probs=199.9
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
.|...+.||+|+||.||+|.. .++..||+|.+..... .....+.+|++++++++|||++++++++.++...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 377788999999999999994 5789999999864322 233568889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+.+ +|.+.+......+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 9974 788887766667999999999999999999999986 999999999999999999999999998754332
Q ss_pred eeeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
....|++.|+|||++. .+.++.++|||||||++|||++|+.||...+....... ..... ... ..
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~~-~~~----~~--- 245 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNE-SPT----LQ--- 245 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH---HHhcc-CCC----CC---
Confidence 2346888999999984 35688999999999999999999999865543222111 11111 000 00
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.......+.+++.+||+.+|.+||++.++++.+...
T Consensus 246 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 246 -SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred -CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 111233488999999999999999999999876544
No 300
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.2e-35 Score=306.95 Aligned_cols=258 Identities=22% Similarity=0.271 Sum_probs=198.0
Q ss_pred ccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCC-CCceeeEeeEEEeC--CeEEEEEE
Q 004400 418 FATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK-QGNREFINEIGMISALQ-HPNLVKLYGCCIEG--NQLLLIYE 492 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~e 492 (756)
|+..+.||+|+||.||+|. ..+++.||+|.++.... .......+|+.+++++. |+|++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 5567899999999999998 45789999999876422 22234567999999885 99999999999987 89999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|++ |+|.+.+......+++..+..++.|++.||+|||+.+ ++||||||+||+++. +.+||+|||+++........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~ 155 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY 155 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence 997 5888888765567999999999999999999999986 999999999999999 99999999999865433221
Q ss_pred eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc-----------ccc
Q 004400 573 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-----------LME 640 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~ 640 (756)
....++..|+|||.+.. ..++.++|||||||++|||++|+.||...+......+......... ...
T Consensus 156 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 156 --TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred --CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 23457889999997654 5578899999999999999999999977665544433322111000 000
Q ss_pred ccccC-CCC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 641 LVDTN-PGS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 641 ~~~~~-~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+. ... .........+.+++.+|++.+|++||++.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000 000 0011234568999999999999999999999763
No 301
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.8e-35 Score=309.88 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=202.4
Q ss_pred HhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC----
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGN---- 485 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 485 (756)
.+.++|+..+.||+|+||.||+|.. .+++.||+|.++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 4567899999999999999999995 468899999986542 223356788999999999999999999987655
Q ss_pred ------eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEcc
Q 004400 486 ------QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISD 559 (756)
Q Consensus 486 ------~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~D 559 (756)
..++|+||+++ ++.+.+......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCc
Confidence 78999999986 677777655557999999999999999999999986 99999999999999999999999
Q ss_pred CCccccCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcc
Q 004400 560 FGLAKLDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL 638 (756)
Q Consensus 560 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (756)
||++...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.................
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 99998655433222233456788999998865 35788999999999999999999999765544333222221111000
Q ss_pred ---ccccc--------cCCC--C---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 639 ---MELVD--------TNPG--S---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 639 ---~~~~~--------~~~~--~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+.. .... . ......+..+.+++.+||+.+|.+||++.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 0000 0 0000123458899999999999999999998753
No 302
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8.3e-35 Score=301.48 Aligned_cols=252 Identities=26% Similarity=0.436 Sum_probs=205.4
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++|+..+.||+|++|.||+|... +++.|++|++..... .....+.+|+.++.+++|+||+++++++..++..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999955 599999999876543 3457799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHG-ESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+++++|.+++... ..+++..+..++.|+++|++|||+ .+ ++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 9999999999755 578999999999999999999999 86 999999999999999999999999999865443322
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.....+....... ... ...+.
T Consensus 157 -~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~---------~~~~~ 225 (264)
T cd06623 157 -CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD-GPP---------PSLPA 225 (264)
T ss_pred -ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc-CCC---------CCCCc
Confidence 1234678899999999988899999999999999999999999965532111111111111 000 01111
Q ss_pred H-HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 653 E-QVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 653 ~-~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
. ....+.+++.+|++.+|++||++.++++.
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 226 EEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 23458899999999999999999999874
No 303
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.9e-35 Score=308.92 Aligned_cols=261 Identities=24% Similarity=0.365 Sum_probs=201.3
Q ss_pred ccccCcccCCCCccEEEeecc-CCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEEEEE
Q 004400 418 FATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLLIYE 492 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e 492 (756)
|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566789999999999999954 58899999997653 33346788999999999999999999999988 89999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+++ +|.+++......+++..+..++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++.........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence 9985 898888765568999999999999999999999986 999999999999999999999999999866544322
Q ss_pred eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc---cccccc-----
Q 004400 573 ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK---LMELVD----- 643 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 643 (756)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+................ .....+
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07840 157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFE 236 (287)
T ss_pred cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhh
Confidence 2233457889999998765 4578999999999999999999999976654333222211111000 000000
Q ss_pred -cCCCCC--------CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 644 -TNPGSN--------FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 644 -~~~~~~--------~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...... +.......+.+++.+||+.+|++||++.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000 000014468899999999999999999998763
No 304
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=8e-35 Score=315.06 Aligned_cols=259 Identities=22% Similarity=0.306 Sum_probs=198.0
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------C
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG------N 485 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 485 (756)
.++|+..+.||+|+||.||+|. ..+++.||+|.+... .......+.+|+.++++++||||++++++|... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 4689999999999999999999 457899999998643 223345677899999999999999999998644 3
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
..++||||+.+ +|.+.+... +++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++.
T Consensus 95 ~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 95 DVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred cEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 57999999965 888877532 889999999999999999999986 99999999999999999999999999986
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHH------------
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLK------------ 633 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~------------ 633 (756)
...... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...+............
T Consensus 168 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T cd07850 168 AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQ 245 (353)
T ss_pred CCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 543221 233467899999999999999999999999999999999999997654332211110000
Q ss_pred --------hcCc-----cccccccC----CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 634 --------EQGK-----LMELVDTN----PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 634 --------~~~~-----~~~~~~~~----~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... ..+..... ............+.+++.+|++.||++||++.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 246 PTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 00000000 0000011234457899999999999999999999864
No 305
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.8e-35 Score=308.68 Aligned_cols=260 Identities=25% Similarity=0.345 Sum_probs=197.5
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|+..+.||+|++|.||+|+. .+++.||||.+.... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478889999999999999985 578999999986542 22335788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+. ++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||+|+||+++.++.+||+|||+++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 96 5898888643 356899999999999999999999986 999999999999999999999999998765432221
Q ss_pred eeeccccCccCCchHhhhcCC-CCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC---------------
Q 004400 573 ISTRVAGTIGYMAPEYAMRGH-LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG--------------- 636 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~--------------- 636 (756)
.....++..|+|||.+.+.. ++.++||||||+++|||+||+.||...+...............
T Consensus 157 -~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 157 -YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred -cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 22335788999999886644 6889999999999999999999996654332211110000000
Q ss_pred -ccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 637 -KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 637 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.......... ....+.....+.+++.+|++.||++||++.++++.
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 236 PSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000000 00001122347789999999999999999998753
No 306
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.5e-35 Score=302.29 Aligned_cols=249 Identities=23% Similarity=0.420 Sum_probs=200.4
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|+||.||+|.. .+|..||+|.+.... ....+.+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 467788999999999999995 468899999986531 23345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC-EEEccCCccccCcccCc
Q 004400 494 LENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN-SKISDFGLAKLDEEENT 571 (756)
Q Consensus 494 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~-~kl~DFGla~~~~~~~~ 571 (756)
+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+||++++++. +||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999999999753 335899999999999999999999986 999999999999998854 69999999986543322
Q ss_pred ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFD 651 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (756)
......|++.|+|||+..+..++.++||||||+++||+++|+.||...+.... ...... ...... .
T Consensus 158 -~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~-~~~~~~---------~ 223 (257)
T cd08225 158 -LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL---VLKICQ-GYFAPI---------S 223 (257)
T ss_pred -cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHhc-ccCCCC---------C
Confidence 22234689999999999888899999999999999999999999965443221 111111 111111 1
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 652 KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 652 ~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+.....+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1122348899999999999999999999764
No 307
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.3e-36 Score=316.95 Aligned_cols=245 Identities=25% Similarity=0.440 Sum_probs=194.7
Q ss_pred cccCcccCCCCccEEEeec-cCCcEEEEEEccc----cCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe--EEEEE
Q 004400 419 ATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSS----KSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ--LLLIY 491 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lV~ 491 (756)
....+||+|+|-+||+|.. .+|..||=-.++. .+....++|..|+.+|+.|+|||||++|+++.+... +-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4457899999999999995 4577776432221 133445789999999999999999999999987655 88999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC-CCEEEccCCccccCcccC
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~-~~~kl~DFGla~~~~~~~ 570 (756)
|.|..|+|..++.+.+ .++......|++||++||.|||++ .|||||||||-+||+|+.+ |.|||+|.|+|+......
T Consensus 123 EL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 9999999999997664 789999999999999999999998 6899999999999999865 789999999998765432
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCcc-chhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKE-DMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
...+.|||.|||||+.. ..|++.+||||||+.++||+|+..||..- +...+... ...+..+..+.+-
T Consensus 201 ---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKK----V~SGiKP~sl~kV---- 268 (632)
T KOG0584|consen 201 ---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKK----VTSGIKPAALSKV---- 268 (632)
T ss_pred ---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHH----HHcCCCHHHhhcc----
Confidence 23378999999999887 68999999999999999999999999433 22222221 1122222222111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.++|.+|+.. .++|||+.|+++.
T Consensus 269 ----~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 269 ----KDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ----CCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 112488999999998 9999999999753
No 308
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.5e-35 Score=307.84 Aligned_cols=253 Identities=27% Similarity=0.438 Sum_probs=193.4
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC-cccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|+||.||++. ..+++.||+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 55667899999999999999 4568999999987542 234457889999999996 99999999999999999999999
Q ss_pred cCCCCHHHHH---Hh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 494 LENNSLARAL---FE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 494 ~~~gsL~~~l---~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
+.. ++.++. .. ....+++..+.+++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 875 554433 22 2357899999999999999999999752 4999999999999999999999999999754332
Q ss_pred CcceeeccccCccCCchHhhhcC---CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRG---HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
.. .....|+..|+|||++.+. .++.++|||||||++|||++|+.||..... .......... ......
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~-~~~~~~----- 231 (288)
T cd06616 162 IA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVK-GDPPIL----- 231 (288)
T ss_pred Cc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcC-CCCCcC-----
Confidence 21 1234688999999999876 689999999999999999999999954431 1111110000 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...........+.+++.+||+.+|++||++.+|++.
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 232 SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111233458899999999999999999999764
No 309
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.1e-35 Score=302.88 Aligned_cols=247 Identities=26% Similarity=0.348 Sum_probs=201.3
Q ss_pred CccccCcccCCCCccEEEeecc-CCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999954 68999999987542 2345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
|+.+++|.+++... ..+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999998755 57899999999999999999999986 9999999999999999999999999998654432
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||........ .+....... .. ...+.
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~-~~---------~~~~~ 223 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRAKQET-AD---------VLYPA 223 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH-HHHHHHhcc-cc---------ccCcc
Confidence 12335688899999999888899999999999999999999999965543211 111111110 11 11112
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCH--HHHH
Q 004400 653 EQVMVMINVALLCANASPTIRPSM--SSVL 680 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~--~ev~ 680 (756)
.....+.+++.+||+.+|.+||++ +|++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 223458899999999999999999 6654
No 310
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.3e-34 Score=307.63 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=200.4
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 489 (756)
.++|+..+.||+|+||.||+|.. .+|+.||+|.+..... .....+.+|+.++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 46789999999999999999995 5689999999864422 2233567899999999999999999998765 56899
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||+.+ +|.+++......+++..+..++.|++.||+|||+.| ++||||||+||+++.++.+||+|||++......
T Consensus 86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999975 888888766667999999999999999999999997 999999999999999999999999999865433
Q ss_pred CcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc--cc-------
Q 004400 570 NTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK--LM------- 639 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~------- 639 (756)
... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+................ ..
T Consensus 162 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 162 AKP-MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred cCC-CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 211 122345788999999875 4588999999999999999999999976655443322221111000 00
Q ss_pred --cc--cccCCCCCCC---HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 --EL--VDTNPGSNFD---KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 --~~--~~~~~~~~~~---~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. .......... ......+.+++.+|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0000000000 0123457789999999999999999999864
No 311
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7.1e-35 Score=313.32 Aligned_cols=268 Identities=24% Similarity=0.351 Sum_probs=201.3
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC-cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-----eE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISALQHPNLVKLYGCCIEGN-----QL 487 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 487 (756)
+++|...+.||+|+||.||+|. ..+|+.||+|.+.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 4689999999999999999998 4578999999986432 223456888999999999999999999876543 57
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++|+||+.+ +|.+.+.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~lv~e~~~~-~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELMET-DLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhccc-CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 999999975 78777643 36899999999999999999999996 9999999999999999999999999997654
Q ss_pred ccCcc--eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcc---cc-
Q 004400 568 EENTH--ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL---ME- 640 (756)
Q Consensus 568 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~- 640 (756)
..... ......||..|+|||.+.+ ..++.++||||+||++|+|++|+.||...+......+.......... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 32221 1223568999999998765 46899999999999999999999999665443322221111110000 00
Q ss_pred -------c---cccCCCCCC---CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--hccCcc
Q 004400 641 -------L---VDTNPGSNF---DKEQVMVMINVALLCANASPTIRPSMSSVLRM--LECGVD 688 (756)
Q Consensus 641 -------~---~~~~~~~~~---~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~--L~~~~~ 688 (756)
. ......... .+.....+.+++.+||+.+|++||++.|+++. ++.+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 0 000000000 01123458899999999999999999999876 555433
No 312
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.4e-34 Score=299.73 Aligned_cols=242 Identities=23% Similarity=0.322 Sum_probs=194.8
Q ss_pred ccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 424 IGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 424 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|+++++.++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999995 458999999986532 23346789999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeecccc
Q 004400 500 ARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAG 579 (756)
Q Consensus 500 ~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~g 579 (756)
.+++... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||+++...... ......|
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~ 154 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCG 154 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccC
Confidence 9999754 36899999999999999999999986 9999999999999999999999999998665432 1223468
Q ss_pred CccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHH
Q 004400 580 TIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMI 659 (756)
Q Consensus 580 t~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 659 (756)
+..|+|||.+....++.++|+||+|+++|+|++|+.||...... .............. ..++......+.
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 224 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED-PMEIYNDILKGNGK---------LEFPNYIDKAAK 224 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC-HHHHHHHHhccCCC---------CCCCcccCHHHH
Confidence 89999999998888999999999999999999999999655421 11111111110111 111111234589
Q ss_pred HHHHHhhcCCCCCCCC-----HHHHHH
Q 004400 660 NVALLCANASPTIRPS-----MSSVLR 681 (756)
Q Consensus 660 ~l~~~c~~~~P~~RPt-----~~ev~~ 681 (756)
+++.+||+.+|++||+ +.|+++
T Consensus 225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 225 DLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHccCChhhCcCCcccCHHHHhc
Confidence 9999999999999999 666655
No 313
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-34 Score=305.18 Aligned_cols=262 Identities=23% Similarity=0.275 Sum_probs=195.7
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCe-----
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQ----- 486 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 486 (756)
++|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688899999999999999994 5789999998765422 23457888999999995 6999999999987665
Q ss_pred EEEEEEecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-CCCEEEccCC
Q 004400 487 LLLIYEYLENNSLARALFEH----RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFG 561 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-~~~~kl~DFG 561 (756)
.++||||+++ +|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 788888643 235899999999999999999999986 999999999999998 8899999999
Q ss_pred ccccCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccc-
Q 004400 562 LAKLDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM- 639 (756)
Q Consensus 562 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 639 (756)
+++........ .....+++.|+|||++.+ ..++.++||||||+++|+|++|..||...+..................
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 157 LGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred cceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 99754332111 122356889999998865 457999999999999999999999997654432211110000000000
Q ss_pred --cc---cc---cCCC-----CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 --EL---VD---TNPG-----SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 --~~---~~---~~~~-----~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. .+ .... ....+.....+.+++.+|++.+|.+||++.|++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 00 0000 00001123458899999999999999999998753
No 314
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.5e-35 Score=305.81 Aligned_cols=260 Identities=25% Similarity=0.364 Sum_probs=196.8
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
|+..+.||+|++|.||+|.. .+|+.||+|++.... ......+.+|+++++.++|||++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56678999999999999984 579999999986542 223357889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+ ++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||+++........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~- 155 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT- 155 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-
Confidence 5 68999886543 46899999999999999999999986 999999999999999999999999999765432221
Q ss_pred eeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhH-HHHHHHHHhcC--------ccccc--
Q 004400 574 STRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYL-LDWALVLKEQG--------KLMEL-- 641 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~--------~~~~~-- 641 (756)
.....++..|+|||++.+. .++.++||||||+++|+|++|+.||...+.... ........... ...+.
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 1223568899999987654 578999999999999999999999965543221 11100000000 00000
Q ss_pred -ccc---CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 642 -VDT---NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 642 -~~~---~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
... .......+.....+.+++.+|++.+|++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 00000011122358899999999999999999999753
No 315
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.5e-34 Score=303.17 Aligned_cols=260 Identities=26% Similarity=0.389 Sum_probs=199.0
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
+|+..+.||+|++|.||+|+. .+|+.||||.+..... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 477889999999999999995 4689999999875432 23466788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 495 ENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 495 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
++ +|.+++.... ..+++..+.+++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 85 8888886443 46899999999999999999999986 999999999999999999999999999754432221
Q ss_pred eeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC---------cccccc
Q 004400 573 ISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG---------KLMELV 642 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 642 (756)
.....++..|++||.+.+. .++.++|||||||++|++++|+.||...+............... ......
T Consensus 157 -~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 157 -FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred -cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 1234578899999998664 57889999999999999999999996554332222111100000 000000
Q ss_pred ccCCC------CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 643 DTNPG------SNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 643 ~~~~~------~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
...+. ....+.....+.+++.+|++.+|.+||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0001122345789999999999999999999875
No 316
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-34 Score=301.51 Aligned_cols=240 Identities=25% Similarity=0.315 Sum_probs=189.6
Q ss_pred ccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 424 IGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 424 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
||+|+||+||+|. ..+|+.||+|.+.... ......+..|+++++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6999999999998 4578999999986532 22345677899999999999999999999999999999999999999
Q ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccc
Q 004400 500 ARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVA 578 (756)
Q Consensus 500 ~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 578 (756)
.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||.+....... ......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC--cccccc
Confidence 99997543 36899999999999999999999987 9999999999999999999999999987654321 122345
Q ss_pred cCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHH
Q 004400 579 GTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVM 658 (756)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 658 (756)
++..|+|||++.+..++.++|||||||++|+|++|+.||............ .. ... .. . ...+......+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~-~~~-~~-~----~~~~~~~~~~~ 225 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL---KR-RTL-EM-A----VEYPDKFSPEA 225 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH---Hh-ccc-cc-c----ccCCccCCHHH
Confidence 788999999998888999999999999999999999999654331111100 00 000 00 0 01111123348
Q ss_pred HHHHHHhhcCCCCCCCCHHH
Q 004400 659 INVALLCANASPTIRPSMSS 678 (756)
Q Consensus 659 ~~l~~~c~~~~P~~RPt~~e 678 (756)
.+++.+||+.+|++||++.+
T Consensus 226 ~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 226 KDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHccCChhHccCCCc
Confidence 89999999999999994444
No 317
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.2e-34 Score=302.96 Aligned_cols=242 Identities=26% Similarity=0.299 Sum_probs=186.3
Q ss_pred cccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHHHHHh---CCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 423 NIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIGMISA---LQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
.||+|+||.||+|.. .+++.||+|.+..... .....+.+|..+++. .+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 5689999998865321 122334555544443 479999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........ .
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~---~ 153 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP---H 153 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccCc---c
Confidence 999999886543 6999999999999999999999987 99999999999999999999999999875433221 2
Q ss_pred ccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 576 RVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
...|+..|+|||.+.+ ..++.++||||+||++|||++|+.||............. ... .... ..+...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~-~~~------~~~~----~~~~~~ 222 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-MTL------TVNV----ELPDSF 222 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH-Hhh------cCCc----CCcccc
Confidence 3468999999999874 458999999999999999999999995432211111100 000 0011 112222
Q ss_pred HHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 004400 655 VMVMINVALLCANASPTIRP-----SMSSVLRM 682 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RP-----t~~ev~~~ 682 (756)
...+.+++.+|++.||.+|| +++|+++.
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 34588999999999999999 58888664
No 318
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3e-34 Score=296.02 Aligned_cols=251 Identities=30% Similarity=0.457 Sum_probs=205.0
Q ss_pred CccccCcccCCCCccEEEeecc-CCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLLLIY 491 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 491 (756)
+|...+.||+|++|.||+|... +++.|++|.+..... ...+.+.+|++++++++||||+++++.+.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677789999999999999955 789999999876532 3457889999999999999999999999988 8999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999997654 8999999999999999999999986 99999999999999999999999999986654432
Q ss_pred c-eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 572 H-ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 572 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
. ......++..|+|||.......+.++||||||+++|+|++|+.||...+......+. ........ ..
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~---------~~ 225 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYK--IGSSGEPP---------EI 225 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHh--ccccCCCc---------CC
Confidence 1 123356889999999998888999999999999999999999999665421111111 00001111 11
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+......+.+++.+|++.+|++||++.++++.
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 22223458999999999999999999999863
No 319
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.8e-34 Score=303.53 Aligned_cols=244 Identities=26% Similarity=0.432 Sum_probs=197.7
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHH
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLA 500 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 500 (756)
..||+|+||.||+|.. .++..||||.+..........+.+|+.+++.++|+||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999985 578999999986554445567899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccC
Q 004400 501 RALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGT 580 (756)
Q Consensus 501 ~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt 580 (756)
+++.. ..+++..+..++.|++.||+|||+.| ++||||+|+||++++++.++|+|||++........ ......|+
T Consensus 106 ~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~ 179 (292)
T cd06657 106 DIVTH--TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLVGT 179 (292)
T ss_pred HHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc-cccccccC
Confidence 98753 35899999999999999999999986 99999999999999999999999999875443221 12335688
Q ss_pred ccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHH
Q 004400 581 IGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMIN 660 (756)
Q Consensus 581 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 660 (756)
..|+|||.+.+..++.++||||+|+++|||++|+.||............. . . ...... .. .. ....+.+
T Consensus 180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~---~-~-~~~~~~-~~-~~----~~~~l~~ 248 (292)
T cd06657 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR---D-N-LPPKLK-NL-HK----VSPSLKG 248 (292)
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---h-h-CCcccC-Cc-cc----CCHHHHH
Confidence 99999999988889999999999999999999999997654433222111 1 0 000000 00 11 1234788
Q ss_pred HHHHhhcCCCCCCCCHHHHHHH
Q 004400 661 VALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 661 l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
++.+||+.+|.+||++.++++.
T Consensus 249 li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 249 FLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHhCCcccCcCHHHHhcC
Confidence 9999999999999999998873
No 320
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=283.43 Aligned_cols=253 Identities=25% Similarity=0.414 Sum_probs=200.6
Q ss_pred hhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc-CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 490 (756)
..++.+....||.|.-|.|++++. .+|..+|||.+.+. .++..+++...+.++.+- .+|.||+.+|||..+...++.
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 345556677899999999999994 56899999999765 444556777788876665 489999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
||.|.. -++.++..-...+++..+-++...+.+||.||.+++ .|||||+||+|||+|+.|.+|+||||++-..-+..
T Consensus 170 MelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 170 MELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 999854 466667666678999999999999999999998875 69999999999999999999999999997655443
Q ss_pred cceeeccccCccCCchHhhhc---CCCCcccchhhHHHHHHHHHhCCCCCCccc-hhhHHHHHHHHHhcCccccccccCC
Q 004400 571 THISTRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKED-MFYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
.+ +..+|-+.|||||.+.- ..|+.++||||||+.++|+.||+.||.+.+ .++.+..+ .. .+ ...++..
T Consensus 247 Ah--trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkv---ln-~e-PP~L~~~- 318 (391)
T KOG0983|consen 247 AH--TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKV---LN-EE-PPLLPGH- 318 (391)
T ss_pred cc--ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHH---Hh-cC-CCCCCcc-
Confidence 33 45678999999999864 468999999999999999999999997643 33333221 11 11 1122111
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..|++ .+.+++..|+..|+.+||...++++.
T Consensus 319 -~gFSp----~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 319 -MGFSP----DFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred -cCcCH----HHHHHHHHHhhcCcccCcchHHHhcC
Confidence 12444 48999999999999999999998764
No 321
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.6e-34 Score=295.27 Aligned_cols=249 Identities=24% Similarity=0.423 Sum_probs=205.4
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|+||.||+|.. .++..||+|++..... .....+.+|+++++.++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 477788999999999999995 4689999999876432 4556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 494 LENNSLARALFEH---RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 494 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
+++++|.+++... ...+++..+..++.+++.||+|||+.| ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999764 367999999999999999999999986 9999999999999999999999999998655443
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.......|++.|+|||......++.++||||+|+++|+|++|+.||...+....... .. .......
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~---~~-~~~~~~~--------- 223 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALK---IL-KGQYPPI--------- 223 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHH---Hh-cCCCCCC---------
Confidence 223345688999999999888899999999999999999999999966543322211 11 1111111
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+......+.+++.+||..+|++||++.++++.
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11122348899999999999999999998763
No 322
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.1e-34 Score=303.77 Aligned_cols=261 Identities=25% Similarity=0.341 Sum_probs=195.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
++|+..+.||+|++|.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++.++...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4688889999999999999995 4789999999865422 233578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-CCCEEEccCCccccCcccC
Q 004400 493 YLENNSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 493 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-~~~~kl~DFGla~~~~~~~ 570 (756)
|++ ++|.+++... ...+++..+..++.||+.||+|||+++ ++||||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 4787777543 334688889999999999999999986 999999999999985 5579999999997654322
Q ss_pred cceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccc-------c
Q 004400 571 THISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMEL-------V 642 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 642 (756)
. ......+++.|+|||++.+. .++.++|||||||++|+|+||+.||...+.............. ..... .
T Consensus 158 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 235 (294)
T PLN00009 158 R-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGT-PNEETWPGVTSLP 235 (294)
T ss_pred c-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CChhhccccccch
Confidence 1 12234578899999998764 5789999999999999999999999655433221111000000 00000 0
Q ss_pred c---cCC---CC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 643 D---TNP---GS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 643 ~---~~~---~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+ ..+ .. ...+.....+.+++.+|++.+|++||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 00 0011123347899999999999999999999863
No 323
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.9e-34 Score=307.33 Aligned_cols=200 Identities=28% Similarity=0.444 Sum_probs=168.1
Q ss_pred CccccCcccCCCCccEEEeecc---CCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA---DGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQLL 488 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 488 (756)
+|...+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677889999999999999954 57899999997632 33346778899999999999999999999988 8899
Q ss_pred EEEEecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC----CCCEEEccC
Q 004400 489 LIYEYLENNSLARALFEH----RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK----DLNSKISDF 560 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~----~~~~kl~DF 560 (756)
+||||+++ ++.+.+... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 676666422 236889999999999999999999986 999999999999999 899999999
Q ss_pred CccccCcccCc--ceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCcc
Q 004400 561 GLAKLDEEENT--HISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKE 620 (756)
Q Consensus 561 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~ 620 (756)
|+++....... .......+++.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 99986543322 112335688999999988764 5889999999999999999999999544
No 324
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.6e-34 Score=296.19 Aligned_cols=249 Identities=26% Similarity=0.358 Sum_probs=197.5
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc-----CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--CeE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-----SKQGNREFINEIGMISALQHPNLVKLYGCCIEG--NQL 487 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 487 (756)
.+|...+.||+|+||.||+|.. .+++.||+|.+... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999994 56899999987432 122345788999999999999999999998764 568
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++|+||+++++|.+++.... .+++..+..++.|++.||+|||+.| ++||||||+||+++.++.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 89999999999999987543 5889999999999999999999987 9999999999999999999999999998643
Q ss_pred ccCc--ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 568 EENT--HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 568 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
.... .......|+..|+|||.+.+..++.++|||||||++||+++|+.||.......... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~-------- 226 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF---KIATQPT-------- 226 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH---HHHcCCC--------
Confidence 2111 11223568999999999988889999999999999999999999996543322111 0111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....+......+.+++.+|++ +|..||+..+++.
T Consensus 227 -~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 227 -KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 111222333458899999999 5799999998765
No 325
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.7e-34 Score=304.85 Aligned_cols=249 Identities=28% Similarity=0.436 Sum_probs=198.5
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
.+.|+..+.||+|+||.||+|+. .++..||+|.+... ......++.+|+++++.++|+|++++++++..+...++|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 34577778999999999999994 56889999988642 223345688899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+. |++.+.+......+++.++..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 99997 5888887666667899999999999999999999986 999999999999999999999999998754332
Q ss_pred cceeeccccCccCCchHhhhc---CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...+...... ... ....... .
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~-~~~~~~~----~- 235 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIA-QNESPAL----Q- 235 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH---HHh-hcCCCCc----C-
Confidence 23468889999999853 467889999999999999999999986543322111 111 1111110 0
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.......+.+++.+||+.+|++||++.++++...
T Consensus 236 ---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 236 ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 1122344889999999999999999999987744
No 326
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.7e-34 Score=305.18 Aligned_cols=264 Identities=22% Similarity=0.305 Sum_probs=197.7
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC------
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGN------ 485 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 485 (756)
.++|+..+.||+|+||.||+|.. .+++.||||.+.... ......+.+|++++++++||||++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 35788999999999999999994 578999999886432 222345678999999999999999999987654
Q ss_pred --eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcc
Q 004400 486 --QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 563 (756)
Q Consensus 486 --~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla 563 (756)
..++||||+.+ +|.+.+......+++.++..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCc
Confidence 45999999975 888888766567899999999999999999999986 999999999999999999999999999
Q ss_pred ccCcccCcc---eeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc--
Q 004400 564 KLDEEENTH---ISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-- 637 (756)
Q Consensus 564 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 637 (756)
......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||...+..............-.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 765432211 12234578899999988664 478899999999999999999999976654333222211111000
Q ss_pred ------cccccc-----cCCCCCC-----CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 ------LMELVD-----TNPGSNF-----DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 ------~~~~~~-----~~~~~~~-----~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.....+ ....... .......+.+++.+||+.+|.+||+++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000000 0000000 00012346789999999999999999998753
No 327
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.1e-34 Score=297.00 Aligned_cols=247 Identities=27% Similarity=0.425 Sum_probs=203.8
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|+..+.||+|+||.||++. ..+++.+|+|.+.... ......+.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 47788999999999999998 4578899999987542 23345778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 494 LENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 494 ~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
+++++|.+++.. ....+++..+..++.|++.||+|||+.| ++||||+|+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 999999999864 2356899999999999999999999987 9999999999999999999999999998765441
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.....|+..|+|||...+..++.++|+||+|+++||+++|+.||...+........ ...... ..
T Consensus 158 ---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~----~~~~~~---------~~ 221 (256)
T cd08530 158 ---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKV----QRGKYP---------PI 221 (256)
T ss_pred ---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----hcCCCC---------CC
Confidence 22345788999999999888999999999999999999999999766543322211 111111 11
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+......+.+++.+|++.+|.+||++.++++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred chhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 12334458999999999999999999999764
No 328
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=330.97 Aligned_cols=256 Identities=22% Similarity=0.284 Sum_probs=211.7
Q ss_pred hHHHhhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGN 485 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 485 (756)
+++...++|.+.++||+|+||.|..++. .+++.||+|++.+- ......-|+.|-.+|..-+.+=||++...|+++.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 4455568999999999999999999995 57899999999762 2334467899999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
++|+|||||+||+|-..+.... .+++..++.++..|.-||.-+|+.| +|||||||+|||+|..|++||+|||.+-.
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHh
Confidence 9999999999999999997766 8999999999999999999999997 99999999999999999999999999988
Q ss_pred CcccCcceeeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccc
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLME 640 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (756)
+..++...+...+|||.|++||++.. +.|++.+|.||+||++|||+.|..||+.+.......... ...+...
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm---~hk~~l~ 301 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIM---NHKESLS 301 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHh---chhhhcC
Confidence 88777777778899999999999963 579999999999999999999999998876554333221 1112222
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC---HHHHH
Q 004400 641 LVDTNPGSNFDKEQVMVMINVALLCANASPTIRPS---MSSVL 680 (756)
Q Consensus 641 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt---~~ev~ 680 (756)
+++. .+.+....++|++.+. +|+.|-. +.++-
T Consensus 302 FP~~-------~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 302 FPDE-------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred CCcc-------cccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 2211 1123346777777765 7888887 66664
No 329
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.9e-34 Score=301.43 Aligned_cols=253 Identities=20% Similarity=0.246 Sum_probs=183.9
Q ss_pred hcCccccCcccCCCCccEEEeeccC----CcEEEEEEccccCcccH-----------HHHHHHHHHHHhCCCCceeeEee
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLAD----GTAIAVKQLSSKSKQGN-----------REFINEIGMISALQHPNLVKLYG 479 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~ 479 (756)
.++|.+.+.||+|+||.||+|...+ +..+|+|.......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578999999999999999999544 45666665432221110 11223444566778999999999
Q ss_pred EEEeCC----eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCE
Q 004400 480 CCIEGN----QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNS 555 (756)
Q Consensus 480 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~ 555 (756)
++.... ..++++|++.. ++.+.+... ...++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcE
Confidence 876543 45778887754 566555432 34678889999999999999999986 9999999999999999999
Q ss_pred EEccCCccccCcccCcc------eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccch-hhHHH-
Q 004400 556 KISDFGLAKLDEEENTH------ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDM-FYLLD- 627 (756)
Q Consensus 556 kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~-~~~~~- 627 (756)
+|+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 99999999865432211 11234699999999999999999999999999999999999999965422 11111
Q ss_pred ----HHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 628 ----WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 628 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
+...... ++. . .... ...+.+++..||+.+|++||++.++++.++
T Consensus 246 ~~~~~~~~~~~-~~~-~------~~~~----~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 246 AKCDFIKRLHE-GKI-K------IKNA----NKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hHHHHHHHhhh-hhh-c------cCCC----CHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111110 000 0 0111 234889999999999999999999998764
No 330
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.2e-34 Score=301.66 Aligned_cols=260 Identities=22% Similarity=0.322 Sum_probs=202.6
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcc--cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQ--GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
|+..+.||+|++|.||+|.. .+++.+++|.+...... ....+.+|++++++++|+||+++++++.+++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 45668899999999999985 47899999998754322 3467888999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
++ ++.+++......+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||.+........ ..
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~-~~ 155 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR-PY 155 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-cc
Confidence 75 888888765568999999999999999999999986 99999999999999999999999999986654331 12
Q ss_pred eccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC------ccc--------
Q 004400 575 TRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG------KLM-------- 639 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------~~~-------- 639 (756)
....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...+............... ...
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF 235 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhh
Confidence 234578899999999876 78999999999999999999999996655433222111110000 000
Q ss_pred cccccCCC--CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 ELVDTNPG--SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 ~~~~~~~~--~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
........ ....+.....+.+++.+||+.||.+||++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000000 00112234578999999999999999999999763
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.7e-34 Score=299.18 Aligned_cols=245 Identities=26% Similarity=0.377 Sum_probs=197.9
Q ss_pred ccCCCCccEEEeecc-CCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 424 IGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 424 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
||+|+||.||+|+.. +|+.|++|.+..... ...+.+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999965 589999999865432 3456788999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc-------c
Q 004400 500 ARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT-------H 572 (756)
Q Consensus 500 ~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~-------~ 572 (756)
.+++.... .+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99997654 7899999999999999999999986 99999999999999999999999999875433211 1
Q ss_pred eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCH
Q 004400 573 ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDK 652 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (756)
......++..|+|||......++.++||||||+++|++++|+.||............ .. +.. ... ....
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~-~~~-~~~---~~~~--- 225 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI---LN-GKI-EWP---EDVE--- 225 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hc-CCc-CCC---cccc---
Confidence 223356888999999998888999999999999999999999999665543322211 11 110 000 0000
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 653 EQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 653 ~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
....+.+++.+||+.+|++||++.++.+.|+
T Consensus 226 -~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 226 -VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 1345889999999999999999966666655
No 332
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.9e-34 Score=293.80 Aligned_cols=247 Identities=30% Similarity=0.492 Sum_probs=203.1
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|...+.||+|++|.||+|.. .+++.|++|.+..... .....+.+|++++++++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 467789999999999999985 4688999999976543 3456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+++++|.+++... ..+++..+..++.|++.||.|||+.| |+||||||+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 9999999998755 57899999999999999999999986 999999999999999999999999999866543332
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
.....|+..|+|||...+..++.++||||+|+++|+|++|+.||......... |.. . ...... .+..
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~-~~~--~-~~~~~~---------~~~~ 222 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL-FRI--V-QDDHPP---------LPEG 222 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH-HHH--h-ccCCCC---------CCCC
Confidence 23356889999999998888899999999999999999999999654432211 111 0 111111 1111
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
....+.+++.+|+..+|++||++.+++.
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 2335889999999999999999999875
No 333
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=341.77 Aligned_cols=254 Identities=31% Similarity=0.458 Sum_probs=206.1
Q ss_pred HHhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEE
Q 004400 412 KAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 412 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 488 (756)
..-+-+|.....||.|.||.||.|. ..+|...|||.++.. .....+...+|..++..++|||+|++||+=.+.+..+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 3345577888999999999999999 677888999987654 2334456788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+.||||++|+|.+.+. ++...++.....+..|++.|++|||++| ||||||||.||+++.+|.+|++|||.|.....
T Consensus 1311 IFMEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecC
Confidence 9999999999999884 4456788888889999999999999998 99999999999999999999999999987655
Q ss_pred cCcce---eeccccCccCCchHhhhcC---CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHH-HhcCccccc
Q 004400 569 ENTHI---STRVAGTIGYMAPEYAMRG---HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVL-KEQGKLMEL 641 (756)
Q Consensus 569 ~~~~~---~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 641 (756)
..... ....+||+-|||||++.+. ....++||||+||++.||+||++||..-+. .|+... ...+..+++
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn----e~aIMy~V~~gh~Pq~ 1462 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN----EWAIMYHVAAGHKPQI 1462 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc----hhHHHhHHhccCCCCC
Confidence 43221 2346899999999999763 356789999999999999999999954432 233322 223333332
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 642 VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 642 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+......-.+++.+|+..||++|.++.|+++.
T Consensus 1463 ---------P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1463 ---------PERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ---------chhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 22344457789999999999999999887654
No 334
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-34 Score=311.58 Aligned_cols=263 Identities=20% Similarity=0.342 Sum_probs=200.5
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEe----CCeE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIE----GNQL 487 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 487 (756)
.++|+..+.||+|+||.||+|. ..+|+.||+|++.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 3688999999999999999999 4579999999987542 2334667889999999999999999998763 3568
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||+. |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999996 5898888644 45999999999999999999999986 9999999999999999999999999997554
Q ss_pred ccCcc---eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc--------
Q 004400 568 EENTH---ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ-------- 635 (756)
Q Consensus 568 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-------- 635 (756)
..... ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||...+..............
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence 32221 1234578999999999865 46899999999999999999999999665543322211111000
Q ss_pred ---CccccccccCC-CCCC-----CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 636 ---GKLMELVDTNP-GSNF-----DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 636 ---~~~~~~~~~~~-~~~~-----~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
........... .... .+.....+.+++.+|++.+|++||++.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000000000 0000 11224568999999999999999999999874
No 335
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.8e-35 Score=309.45 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=207.0
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcc--cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ--GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
....|.+...||+|.|++|..|+ ..++..||||.+.+.... ..+.+.+|+++|..++|||||+++.+...+..+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 35678899999999999999999 457999999999775332 335588999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+.+|.+.+++..++ ...+.++..++.|+.+|++|||+++ |||||||++||||+.+..+||+|||++..+..
T Consensus 134 ~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred EEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc--
Confidence 99999999999998776 4455899999999999999999996 99999999999999999999999999987663
Q ss_pred cceeeccccCccCCchHhhhcCCC-CcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
.....+.+|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||.+.+...+.. ..+.......
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~------------rvl~gk~rIp 275 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP------------RVLRGKYRIP 275 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccc------------hheeeeeccc
Confidence 333466899999999999998765 679999999999999999999997766543322 1111111111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+ -......+++++++-.+|.+|++++++.+.
T Consensus 276 ~--~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 276 F--YMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred c--eeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1 122246788889999999999999999654
No 336
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=314.84 Aligned_cols=265 Identities=24% Similarity=0.371 Sum_probs=202.5
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------CeEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEG------NQLL 488 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 488 (756)
.|...+.||+||||.||+|+ ..+|+.||||.+... .....+...+|+++|++++|+|||+++++=.+. ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 34566899999999999999 678999999999764 334456778999999999999999999985543 3568
Q ss_pred EEEEecCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEec--CCCC--EEEccCCc
Q 004400 489 LIYEYLENNSLARALF--EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD--KDLN--SKISDFGL 562 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~--~~~~--~kl~DFGl 562 (756)
+|||||.+|||...|. ++...+++.+.+.+..+++.||.|||++| ||||||||.||++- ++|+ -||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999998 44568999999999999999999999986 99999999999983 3344 69999999
Q ss_pred cccCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchh---hHHHHHHHHHhcCcc
Q 004400 563 AKLDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMF---YLLDWALVLKEQGKL 638 (756)
Q Consensus 563 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~ 638 (756)
|+-.++.. ....++||..|.+||.+.. +.|+..+|.|||||++||++||..||.+.... ....|..........
T Consensus 171 Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v 248 (732)
T KOG4250|consen 171 ARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV 248 (732)
T ss_pred cccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence 99776544 4566899999999999985 88999999999999999999999999544321 123333322222111
Q ss_pred ccccccC------------CCCCCCHHHHHHHHHHHHHhhcCCCCCCC--CHHHHHHHhccC
Q 004400 639 MELVDTN------------PGSNFDKEQVMVMINVALLCANASPTIRP--SMSSVLRMLECG 686 (756)
Q Consensus 639 ~~~~~~~------------~~~~~~~~~~~~l~~l~~~c~~~~P~~RP--t~~ev~~~L~~~ 686 (756)
.-..... ............+-..+..++..+|++|. .+.+....+..+
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 1111110 11122334444666777788888999998 666665555443
No 337
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6e-34 Score=302.85 Aligned_cols=244 Identities=30% Similarity=0.476 Sum_probs=196.2
Q ss_pred ccccCcccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 418 FATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
|...+.||+|+||.||+|.. .+++.|++|.+..... .....+.+|+++++.++|||++++++++.++...++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55667899999999999984 5688999999864322 2335688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+. |++.+.+......+++.++..++.|++.||+|||+.| ++||||||+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 96 5788888766667999999999999999999999987 99999999999999999999999999864322
Q ss_pred eeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 574 STRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||...+........ .. ...... ....+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~-~~~~~~----~~~~~ 245 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQ-NDSPTL----QSNEW 245 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---Hh-cCCCCC----Ccccc
Confidence 12356889999999984 356888999999999999999999999765543332211 11 111111 11112
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+++.+||+.+|.+||++.++++.
T Consensus 246 ----~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 246 ----TDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2348889999999999999999999864
No 338
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=320.31 Aligned_cols=253 Identities=29% Similarity=0.451 Sum_probs=209.2
Q ss_pred CccccCcccCCCCccEEEee-ccCCc----EEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGT----AIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
....+++||+|+||+||+|. .+.|. +||+|++... ..+...++.+|+-+|.+++|||+++++|+|.... ..||
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 34567899999999999998 45554 5888888654 3445678999999999999999999999998766 8899
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
++||+.|+|.|+++.++..+.-...+.|+.|||+||.|||++. +|||||..+|||+.+-..+||+|||+|+....+.
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999999999999999999999999999999999885 9999999999999999999999999999877655
Q ss_pred cceeec-cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcCccccccccCCCC
Q 004400 571 THISTR-VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGS 648 (756)
Q Consensus 571 ~~~~~~-~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (756)
...... ..-.+.|||-|.+..+.|+.++|||||||.+||++| |..|+.+....++.+ ..+.+++ -
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d----lle~geR---------L 919 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD----LLEKGER---------L 919 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH----HHhcccc---------C
Confidence 443322 233568999999999999999999999999999998 999986654433322 2222222 1
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 649 NFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 649 ~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
.-++.....+..++.+||..|+..||+++++...+...
T Consensus 920 sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 920 SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 22333445588889999999999999999998887654
No 339
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.7e-34 Score=306.95 Aligned_cols=266 Identities=23% Similarity=0.351 Sum_probs=200.7
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC-----Ce
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG-----NQ 486 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 486 (756)
.++|...+.||+|+||.||+|+ ..+++.||||.+... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 4578889999999999999999 457899999998653 233345678899999999999999999988654 34
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
.++|+||+. ++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999996 6888888644 47999999999999999999999986 999999999999999999999999999865
Q ss_pred cccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc----------
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ---------- 635 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~---------- 635 (756)
.... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...+..............
T Consensus 159 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 159 SEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred CCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence 4332 12233467889999999875 46899999999999999999999999655432211111100000
Q ss_pred -Cccccc---cccCCCC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--hccC
Q 004400 636 -GKLMEL---VDTNPGS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM--LECG 686 (756)
Q Consensus 636 -~~~~~~---~~~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~--L~~~ 686 (756)
...... ....... ...+.....+.+++.+|++.+|++||++.++++. ++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 238 NEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred chhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000 0000000 0011223458899999999999999999999876 5543
No 340
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.2e-34 Score=309.76 Aligned_cols=263 Identities=23% Similarity=0.386 Sum_probs=198.1
Q ss_pred hhcCccccCcccCCCCccEEEeecc-CCcEEEEEEcccc--CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC--CeE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSK--SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEG--NQL 487 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 487 (756)
..++|+..+.||+|+||.||+|... +++.||+|++... .......+.+|+.+++++ +||||++++++|... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888899999999999999954 6889999988542 223345677899999999 999999999998654 468
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||++ ++|..++... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999997 5898888654 7899999999999999999999986 9999999999999999999999999998654
Q ss_pred ccCc----ceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh--------
Q 004400 568 EENT----HISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE-------- 634 (756)
Q Consensus 568 ~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~-------- 634 (756)
.... .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 3322 12234568999999998765 4578899999999999999999999965443322111100000
Q ss_pred ------cCccccccccCCC---CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 635 ------QGKLMELVDTNPG---SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 635 ------~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
............. ....+.....+.+++.+||+.+|++||++.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000000 00011123458899999999999999999999864
No 341
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=5.1e-34 Score=295.05 Aligned_cols=244 Identities=23% Similarity=0.298 Sum_probs=190.2
Q ss_pred CcccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHHHH-HhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIGMI-SALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
+.||+|+||.||+|.. .+++.||+|.+..... .....+..|..++ ...+|+|++++++++.+++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999985 5689999999865422 1223445555544 445899999999999999999999999999
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+++.... ...
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~ 152 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKK 152 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-----ccc
Confidence 9999998654 36899999999999999999999986 99999999999999999999999999875433 223
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..|+..|+|||.+.+..++.++||||||+++|||++|..||...+....... .. ..... . ... .......
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~-~~~~~-~-~~~----~~~~~~~ 222 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDN---IL-SRRIN-W-PEE----VKEFCSP 222 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HH-hcccC-C-CCc----ccccCCH
Confidence 4688999999999888899999999999999999999999966544332211 11 11100 0 000 0111233
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 657 VMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 657 ~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.+.+++.+||+.+|++||++.++.+.|+
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 4889999999999999998876655544
No 342
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.8e-34 Score=294.82 Aligned_cols=244 Identities=20% Similarity=0.273 Sum_probs=190.0
Q ss_pred HHhhcCccccCcc--cCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeE
Q 004400 412 KAATNNFATDNNI--GEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 412 ~~~~~~~~~~~~l--g~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 487 (756)
....++|+..+.+ |+|+||.||++. ..++..+|+|.+....... .|+.....+ +||||++++++|..++..
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3344566776666 999999999999 4578899999986532211 122222222 799999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccCCccccC
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLD 566 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGla~~~ 566 (756)
++||||+++|+|.+++.... .+++..+..++.|+++||+|||+.| ++||||||+||+++.++ .++|+|||+++..
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 99999999999999997654 8999999999999999999999997 99999999999999998 9999999998755
Q ss_pred cccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh--hHHHHHHHHHhcCcccccccc
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF--YLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 644 (756)
... ....|+..|+|||++.+..++.++||||||+++|||++|+.||...... ....+.... .....
T Consensus 161 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~---- 228 (267)
T PHA03390 161 GTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---QKKLP---- 228 (267)
T ss_pred CCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---cccCC----
Confidence 432 2245889999999999888999999999999999999999999643321 112221111 11001
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHH
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPS-MSSVLR 681 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt-~~ev~~ 681 (756)
........+.+++.+|++.+|.+||+ ++|+++
T Consensus 229 -----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 229 -----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11123345889999999999999996 688874
No 343
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.7e-34 Score=305.41 Aligned_cols=263 Identities=25% Similarity=0.357 Sum_probs=197.1
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcc--cHHHHHHHHHHHHhCCCCceeeEeeEEEeC-------
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQ--GNREFINEIGMISALQHPNLVKLYGCCIEG------- 484 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 484 (756)
.++|...+.||+|+||.||+|.. .+++.||+|.+...... ....+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 57899999999999999999994 57899999988654222 234678899999999999999999987543
Q ss_pred -CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcc
Q 004400 485 -NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 563 (756)
Q Consensus 485 -~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla 563 (756)
...++|+||+.+ ++...+......+++..+..++.|+++||+|||+.| |+||||||+||++++++.+||+|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccc
Confidence 356999999975 677777665668999999999999999999999997 999999999999999999999999999
Q ss_pred ccCcccCcc----------eeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHH
Q 004400 564 KLDEEENTH----------ISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVL 632 (756)
Q Consensus 564 ~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 632 (756)
+........ ..+...|++.|+|||.+.+. .++.++|||||||++|||++|+.||...+...........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 755432211 11234678899999988654 5889999999999999999999999665543322211111
Q ss_pred HhcC---------ccccccccCCCCCCC-------HHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 633 KEQG---------KLMELVDTNPGSNFD-------KEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 633 ~~~~---------~~~~~~~~~~~~~~~-------~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
.... ......+.......+ ......+.+++.+|++.+|++|||+.|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000 000000000000000 011235889999999999999999999875
No 344
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-34 Score=325.04 Aligned_cols=265 Identities=18% Similarity=0.250 Sum_probs=187.3
Q ss_pred hhcCccccCcccCCCCccEEEeeccC--CcEEEEEE--------------ccc---cCcccHHHHHHHHHHHHhCCCCce
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLAD--GTAIAVKQ--------------LSS---KSKQGNREFINEIGMISALQHPNL 474 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~--------------~~~---~~~~~~~~~~~E~~~l~~l~h~ni 474 (756)
..++|...+.||+|+||+||+|.... +..+++|. +.+ ........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999987432 22222221 111 111233567899999999999999
Q ss_pred eeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEec
Q 004400 475 VKLYGCCIEGNQLLLIYEYLENNSLARALFEHR----LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD 550 (756)
Q Consensus 475 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~ 550 (756)
|++++++.+++..|+|++++. ++|.+++.... .......+..++.||+.||+|||+++ ||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence 999999999999999999985 46777665321 22345667889999999999999986 99999999999999
Q ss_pred CCCCEEEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCcc-chhhHHHHH
Q 004400 551 KDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKE-DMFYLLDWA 629 (756)
Q Consensus 551 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~-~~~~~~~~~ 629 (756)
.++.+||+|||+++..............||..|+|||++.+..++.++|||||||++|||++|+.++... .........
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 9999999999999876554433344567999999999999999999999999999999999988654322 111111100
Q ss_pred HHHHhc----Cccc-------cccccC----CCCCCCH-----HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 630 LVLKEQ----GKLM-------ELVDTN----PGSNFDK-----EQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 630 ~~~~~~----~~~~-------~~~~~~----~~~~~~~-----~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+..- .+.. +.++.. .....+. .....+.+++.+|++.||.+|||+.|+++.
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000000 0000 000000 0000000 011246778899999999999999999864
No 345
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.5e-34 Score=301.11 Aligned_cols=254 Identities=23% Similarity=0.296 Sum_probs=200.1
Q ss_pred CccccCcccCCCCccEEEeec----cCCcEEEEEEccccC----cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKS----KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 487 (756)
+|...+.||+|+||.||+|+. .+++.||||.++... ....+.+.+|++++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367778999999999999873 357889999986432 22335678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 9999999999999998754 46899999999999999999999886 9999999999999999999999999998654
Q ss_pred ccCcceeeccccCccCCchHhhhcCC--CCcccchhhHHHHHHHHHhCCCCCCccchhh-HHHHHHHHHhcCcccccccc
Q 004400 568 EENTHISTRVAGTIGYMAPEYAMRGH--LTEKADVYSFGIVALEIVSGRSNVTKEDMFY-LLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 644 (756)
...........|+..|+|||...+.. .+.++||||||+++|||++|+.||...+... ........... ..
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~ 229 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-------KP 229 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-------CC
Confidence 43333333456899999999987654 7889999999999999999999995432211 11111111110 00
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
.....+ ...+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 230 ~~~~~~----~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 230 PFPKTM----SAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CCCccc----CHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 111112 2347889999999999999999988887773
No 346
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=296.64 Aligned_cols=261 Identities=28% Similarity=0.397 Sum_probs=197.1
Q ss_pred cCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHh--CCCCceeeEeeEEEeCC----eEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISA--LQHPNLVKLYGCCIEGN----QLLL 489 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 489 (756)
......+.||+|.||.||||.+.+ +.||||++.. ...+.|..|-++.+. ++|+||++++++-.... +.+|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhccC-ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 345567899999999999999864 8999999964 445678888887765 58999999999976555 8999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC------CCCCeEcCCCCCCceEecCCCCEEEccCCcc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE------SRIKVVHRDIKATNVLLDKDLNSKISDFGLA 563 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------g~~~iiH~Dikp~Nill~~~~~~kl~DFGla 563 (756)
|++|.+.|+|.++|..+ .++|....+|+.-+++||+|||+. ..++|+|||||++|||+..|+.+.|+|||+|
T Consensus 286 Vt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred EeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999999765 789999999999999999999975 2467999999999999999999999999999
Q ss_pred ccCcccCcc-eeeccccCccCCchHhhhcCC-CC-----cccchhhHHHHHHHHHhCCCCCCcc--c------------h
Q 004400 564 KLDEEENTH-ISTRVAGTIGYMAPEYAMRGH-LT-----EKADVYSFGIVALEIVSGRSNVTKE--D------------M 622 (756)
Q Consensus 564 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~-----~~~Dv~slGv~l~elltg~~p~~~~--~------------~ 622 (756)
..+...... .....+||.+|||||++.+.- +. .+.||||+|.++|||++.-..+.+. . .
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 877643322 223368999999999997632 22 3689999999999999854322110 0 0
Q ss_pred hhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 623 FYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
...-+......+++.+..+.+.=.. ...+..+.+.+..||+.||+.|-|+.=+-+.+.+.
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~----h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRK----HAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhc----CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 0011111122233333333322111 12344588999999999999999998877666543
No 347
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-33 Score=297.20 Aligned_cols=258 Identities=26% Similarity=0.362 Sum_probs=195.5
Q ss_pred ccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcc--cHHHHHHHHHHHHhC---CCCceeeEeeEEEeCCe-----
Q 004400 418 FATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQ--GNREFINEIGMISAL---QHPNLVKLYGCCIEGNQ----- 486 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 486 (756)
|+..+.||+|+||.||+|+.. +++.||+|.+...... ....+.+|+.+++++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566789999999999999965 5899999999754222 234566788777666 59999999999998776
Q ss_pred EEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 487 LLLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
.+++|||+.+ +|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 9999999975 8988886533 36899999999999999999999986 99999999999999999999999999976
Q ss_pred CcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc-Cc--cc---
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ-GK--LM--- 639 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~--~~--- 639 (756)
....... ....++..|+|||++.+..++.++|||||||++|||++|+.||.................. .. ..
T Consensus 157 ~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07838 157 YSFEMAL--TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV 234 (287)
T ss_pred ccCCccc--ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence 5433221 2335788999999999888999999999999999999999998665443222111100000 00 00
Q ss_pred ----cccccCCC---CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 640 ----ELVDTNPG---SNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 640 ----~~~~~~~~---~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
........ ....+.....+.+++.+||+.||.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 0111233456789999999999999999999875
No 348
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.4e-34 Score=301.60 Aligned_cols=252 Identities=27% Similarity=0.436 Sum_probs=195.0
Q ss_pred hcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC-cccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS-KQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 491 (756)
.++|+..+.||+|+||.||+|... +++.||||.++... ......+..|+.++.+.. ||||++++++|.++...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 467888999999999999999965 48999999987542 223456677887777764 999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT 571 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~ 571 (756)
||+.+ ++.+........+++..+..++.|++.||+|||+.. +|+||||+|+||++++++.+||+|||++........
T Consensus 94 e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 94 ELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 99854 777777655557999999999999999999999742 399999999999999999999999999976543222
Q ss_pred ceeeccccCccCCchHhhhcCC----CCcccchhhHHHHHHHHHhCCCCCCccch-hhHHHHHHHHHhcCccccccccCC
Q 004400 572 HISTRVAGTIGYMAPEYAMRGH----LTEKADVYSFGIVALEIVSGRSNVTKEDM-FYLLDWALVLKEQGKLMELVDTNP 646 (756)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slGv~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 646 (756)
. ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||..... ..... ..... .......
T Consensus 171 ~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~-~~~~~~~--- 241 (296)
T cd06618 171 K--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT---KILQE-EPPSLPP--- 241 (296)
T ss_pred c--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH---HHhcC-CCCCCCC---
Confidence 1 2335788999999987543 78899999999999999999999954321 11111 11111 1111100
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 647 GSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+ ...+.+++.+||+.+|++||++.++++.
T Consensus 242 ~~~~----~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 242 NEGF----SPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCC----CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0112 2348899999999999999999999865
No 349
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.1e-35 Score=327.77 Aligned_cols=253 Identities=29% Similarity=0.443 Sum_probs=190.8
Q ss_pred hhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC-------
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGCCIEG------- 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 484 (756)
...+|++...||+||||.||+++. -||+.||||++... +......+.+|+..+++++|||||+++..+.+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 456899999999999999999994 49999999998765 333456788999999999999999988442110
Q ss_pred --------------------------------------------------------------------------------
Q 004400 485 -------------------------------------------------------------------------------- 484 (756)
Q Consensus 485 -------------------------------------------------------------------------------- 484 (756)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred --------------------------------CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 004400 485 --------------------------------NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGE 532 (756)
Q Consensus 485 --------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~ 532 (756)
..+|+-||||+..++.+++..+...-.....++++++|++||+|+|++
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 125788999999888888765543325778899999999999999999
Q ss_pred CCCCeEcCCCCCCceEecCCCCEEEccCCccccCc-------c----------cCcceeeccccCccCCchHhhhcC---
Q 004400 533 SRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE-------E----------ENTHISTRVAGTIGYMAPEYAMRG--- 592 (756)
Q Consensus 533 g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~-------~----------~~~~~~~~~~gt~~y~aPE~~~~~--- 592 (756)
| ||||||||.||++|++..|||+|||+|+... . ......+..+||.-|+|||++.+.
T Consensus 717 g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 717 G---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred c---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 8 9999999999999999999999999998621 0 011123457899999999999764
Q ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcc-chhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCC
Q 004400 593 HLTEKADVYSFGIVALEIVSGRSNVTKE-DMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPT 671 (756)
Q Consensus 593 ~~~~~~Dv~slGv~l~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~ 671 (756)
.|+.|+|+||+|||++||+. ||... +-...+. -.+.+.++.- ..+.......=..++.++++.||.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~----~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSMERASILT----NLRKGSIPEP------ADFFDPEHPEEASLIRWLLSHDPS 860 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchHHHHHHHH----hcccCCCCCC------cccccccchHHHHHHHHHhcCCCc
Confidence 49999999999999999994 45322 1111111 1112222211 122223333456788899999999
Q ss_pred CCCCHHHHHHH
Q 004400 672 IRPSMSSVLRM 682 (756)
Q Consensus 672 ~RPt~~ev~~~ 682 (756)
+|||+.|+++.
T Consensus 861 kRPtA~eLL~s 871 (1351)
T KOG1035|consen 861 KRPTATELLNS 871 (1351)
T ss_pred cCCCHHHHhhc
Confidence 99999999753
No 350
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.4e-34 Score=299.42 Aligned_cols=250 Identities=23% Similarity=0.318 Sum_probs=195.5
Q ss_pred CccccCcccCCCCccEEEeec----cCCcEEEEEEccccC----cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL----ADGTAIAVKQLSSKS----KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 487 (756)
+|+..+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467788999999999999984 378999999986532 22345678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 9999999999999999754 46889999999999999999999986 9999999999999999999999999998654
Q ss_pred ccCcceeeccccCccCCchHhhhcC--CCCcccchhhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhcCcccccccc
Q 004400 568 EENTHISTRVAGTIGYMAPEYAMRG--HLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 644 (756)
...........|+..|+|||.+... .++.++||||||+++|+|++|+.||...... ............. .
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-------~ 229 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-------P 229 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC-------C
Confidence 4332223345689999999998753 4678999999999999999999998543221 1111111111100 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRP-----SMSSVLR 681 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP-----t~~ev~~ 681 (756)
.++......+.+++.+||+.+|++|| +..++++
T Consensus 230 ----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 ----PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 01112233488999999999999997 5565543
No 351
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=5.6e-34 Score=298.39 Aligned_cols=260 Identities=26% Similarity=0.362 Sum_probs=201.6
Q ss_pred ccccCcccCCCCccEEEeecc-CCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 418 FATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
|+..+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456688999999999999954 58999999987653 333467888999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCccee
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIS 574 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 574 (756)
+ ++|.+++......+++..+..++.|++.||+|||+.+ |+||||+|+||++++++.+||+|||.++........ .
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~-~ 155 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT-Y 155 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCccc-c
Confidence 8 5899999866557999999999999999999999996 999999999999999999999999999865443221 2
Q ss_pred eccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC---------cc---ccc
Q 004400 575 TRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG---------KL---MEL 641 (756)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~---------~~---~~~ 641 (756)
....++..|+|||.+.+. .++.++|||||||++||+++|+.||...+............... .. ...
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPT 235 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccc
Confidence 233467789999998776 78999999999999999999999997665433322211111000 00 000
Q ss_pred cccCCCC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 642 VDTNPGS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 642 ~~~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....... ...+.....+.+++.+||+.+|++||++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 236 FPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000000 0001113468999999999999999999999763
No 352
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.4e-34 Score=298.76 Aligned_cols=248 Identities=24% Similarity=0.390 Sum_probs=202.5
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 490 (756)
++|...+.||+|+||.||+|.. .+++.||+|.+... .....+.+.+|++++++++ ||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 3688889999999999999995 47999999998653 2233467888999999998 99999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999997654 7999999999999999999999986 9999999999999999999999999998654433
Q ss_pred c-------------------ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHH
Q 004400 571 T-------------------HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALV 631 (756)
Q Consensus 571 ~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 631 (756)
. .......|+..|+|||......++.++||||||++++++++|+.||.............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~- 235 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL- 235 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-
Confidence 2 12233568899999999988889999999999999999999999997655332221111
Q ss_pred HHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCH----HHHHH
Q 004400 632 LKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSM----SSVLR 681 (756)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~----~ev~~ 681 (756)
. . . ..++......+.+++.+||+.+|.+||++ .++++
T Consensus 236 --~---~----~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 --K---L----E----YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred --h---c----C----CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0 0 0 01111123448899999999999999999 77654
No 353
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.6e-33 Score=294.33 Aligned_cols=241 Identities=26% Similarity=0.299 Sum_probs=186.3
Q ss_pred cccCCCCccEEEeec-cCCcEEEEEEccccCc---ccHHHHHHHHH---HHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 423 NIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSK---QGNREFINEIG---MISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
.||+|+||.||+|.. .+++.||+|.+..... .....+..|.. .++...||+|+++++++.+++..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 5688999999865421 11223444443 3445579999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++........ .
T Consensus 81 g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~---~ 153 (278)
T cd05606 81 GGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP---H 153 (278)
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccCC---c
Confidence 99999988654 47999999999999999999999986 99999999999999999999999999875433221 2
Q ss_pred ccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHH
Q 004400 576 RVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQ 654 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (756)
...|+..|+|||.+.++ .++.++||||+||++|||++|+.||................ ..... .+...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~ 222 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-------TMAVE----LPDSF 222 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-------ccCCC----CCCcC
Confidence 34689999999999754 68999999999999999999999996542221111110000 00111 11112
Q ss_pred HHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 004400 655 VMVMINVALLCANASPTIRP-----SMSSVLR 681 (756)
Q Consensus 655 ~~~l~~l~~~c~~~~P~~RP-----t~~ev~~ 681 (756)
...+.+++.+|+..+|.+|| ++.++++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 33588999999999999999 8989875
No 354
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.1e-35 Score=285.20 Aligned_cols=201 Identities=28% Similarity=0.445 Sum_probs=170.1
Q ss_pred hcCccccCcccCCCCccEEEeecc---C--CcEEEEEEccccCc--ccHHHHHHHHHHHHhCCCCceeeEeeEEEe-CCe
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA---D--GTAIAVKQLSSKSK--QGNREFINEIGMISALQHPNLVKLYGCCIE-GNQ 486 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 486 (756)
...|+....||+|.||.||+|.-. + .+.+|+|.++...+ .......+|+..++.++|||+|.+..+|.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 357888899999999999999632 2 33799999976532 223678899999999999999999999887 889
Q ss_pred EEEEEEecCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC----CCEEEc
Q 004400 487 LLLIYEYLENNSLARALF----EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD----LNSKIS 558 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~----~~~kl~ 558 (756)
+++++||.+. +|...++ .....++......|+.||+.|+.|||++. |+|||+||.|||+..+ |.|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence 9999999987 7888776 22346889999999999999999999996 9999999999999888 899999
Q ss_pred cCCccccCcccCcce--eeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCc
Q 004400 559 DFGLAKLDEEENTHI--STRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTK 619 (756)
Q Consensus 559 DFGla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~ 619 (756)
|||++|++...-... ...++-|++|.|||.+.+. .|+.+.||||.|||+.||+|-++-|.+
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999887654332 3456779999999999884 699999999999999999998877743
No 355
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=324.71 Aligned_cols=254 Identities=33% Similarity=0.511 Sum_probs=207.7
Q ss_pred cCccccCcccCCCCccEEEeecc----C----CcEEEEEEcccc-CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCC
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA----D----GTAIAVKQLSSK-SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGN 485 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 485 (756)
++....+.||+|+||.|++|... . ...||||.++.. .....+.+..|+++|+.+ +|+||+.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34455669999999999999732 1 457999998764 334567899999999999 6999999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEec
Q 004400 486 QLLLIYEYLENNSLARALFEHR---------------LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD 550 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~ 550 (756)
..++|+||+..|+|.++++..+ ..++..+...++.|||.|++||++.. +||||+..+|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEec
Confidence 9999999999999999998766 34889999999999999999999884 99999999999999
Q ss_pred CCCCEEEccCCccccCcccCcceeecccc--CccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccc-hhhHH
Q 004400 551 KDLNSKISDFGLAKLDEEENTHISTRVAG--TIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKED-MFYLL 626 (756)
Q Consensus 551 ~~~~~kl~DFGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~-~~~~~ 626 (756)
++..+||+|||+|+..............| +..|||||.+....|+.|+|||||||++||++| |..|+.+.. ..++.
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~ 532 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELL 532 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHH
Confidence 99999999999999665554443332333 456999999999999999999999999999999 788886532 22222
Q ss_pred HHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 627 DWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
. ...++.+.+....+ ..++.++++.||+.+|++||++.++++.++.
T Consensus 533 ~----~l~~G~r~~~P~~c---------~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 533 E----FLKEGNRMEQPEHC---------SDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred H----HHhcCCCCCCCCCC---------CHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 1 33444444433332 2348899999999999999999999999986
No 356
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.4e-33 Score=300.31 Aligned_cols=255 Identities=21% Similarity=0.262 Sum_probs=190.7
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
+.+|.|+++.||++.. +++.||||++... .......+.+|+++++.++|+||+++++++.+++..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 4445555555555544 7899999998654 334456789999999999999999999999999999999999999999
Q ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc------c
Q 004400 500 ARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT------H 572 (756)
Q Consensus 500 ~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~------~ 572 (756)
.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+........ .
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 9999753 346899999999999999999999986 99999999999999999999999999864432111 1
Q ss_pred eeeccccCccCCchHhhhc--CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc-------C-------
Q 004400 573 ISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ-------G------- 636 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-------~------- 636 (756)
......++..|+|||++.. ..++.++|||||||++|||++|+.||.......... ...... .
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL--EKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhccCccccccCchhhhcC
Confidence 1223457889999999876 358899999999999999999999996543222110 000000 0
Q ss_pred cccc----cccc----CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 637 KLME----LVDT----NPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 637 ~~~~----~~~~----~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... ..+. .............+.+++.+||+.+|++|||+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 0000 00011122334568899999999999999999999764
No 357
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.5e-33 Score=301.87 Aligned_cols=256 Identities=23% Similarity=0.319 Sum_probs=190.9
Q ss_pred CcccCC--CCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 422 NNIGEG--GFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 422 ~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
..||+| +||+||+|.. .+|+.||+|.+.... ....+.+.+|+.+++.++||||++++++|..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 9999999995 579999999986532 22346788899999999999999999999999999999999999
Q ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce--
Q 004400 497 NSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI-- 573 (756)
Q Consensus 497 gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~-- 573 (756)
|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999998754 235899999999999999999999986 9999999999999999999999998654322111100
Q ss_pred ----eeccccCccCCchHhhhcC--CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc----------
Q 004400 574 ----STRVAGTIGYMAPEYAMRG--HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK---------- 637 (756)
Q Consensus 574 ----~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---------- 637 (756)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||.......... ........
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLL--QKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHH--HHhcCCCCCCccccccch
Confidence 1112356679999999763 47899999999999999999999996543221110 00000000
Q ss_pred ---------------cc----------cccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 ---------------LM----------ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 ---------------~~----------~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.. ..................+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 0000000111122345568999999999999999999999764
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.8e-34 Score=305.59 Aligned_cols=261 Identities=22% Similarity=0.340 Sum_probs=202.5
Q ss_pred CccccCcccCCCCccEEEeecc-CCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-----eEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGN-----QLL 488 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 488 (756)
+|...+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++.+.+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999954 58999999987643 334567899999999999999999999998875 789
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+||||+++ +|.+++.... .+++..+..++.|++.||+|||+.| |+||||||+||+++.++.++|+|||++.....
T Consensus 81 lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 99999984 8888886544 8999999999999999999999997 99999999999999999999999999986554
Q ss_pred cCc--ceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc--------
Q 004400 569 ENT--HISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-------- 637 (756)
Q Consensus 569 ~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 637 (756)
... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...+................
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 235 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFIT 235 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcc
Confidence 321 112334678899999999887 789999999999999999999999976654332221111110000
Q ss_pred ---cccccc---cCCCCC---CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 ---LMELVD---TNPGSN---FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 ---~~~~~~---~~~~~~---~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+. ...... ..+.....+.+++.+||+.+|.+||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 236 SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000 000000 011123458899999999999999999999874
No 359
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=303.15 Aligned_cols=261 Identities=21% Similarity=0.304 Sum_probs=196.5
Q ss_pred Ccc-ccCcccCCCCccEEEeec-cCCcEEEEEEccccCccc--------------HHHHHHHHHHHHhCCCCceeeEeeE
Q 004400 417 NFA-TDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQG--------------NREFINEIGMISALQHPNLVKLYGC 480 (756)
Q Consensus 417 ~~~-~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~~ 480 (756)
+|. ..+.||+|+||.||+|.. .+++.||||.+....... ...+.+|+++++.++|+||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 444 457799999999999994 578999999986532211 1257789999999999999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 481 CIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 481 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
+..++..++||||+. |+|.+++.. ...+++.....++.|++.||+|||+.| |+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCc
Confidence 999999999999997 589888864 346899999999999999999999987 999999999999999999999999
Q ss_pred CccccCcccC-------------cceeeccccCccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHH
Q 004400 561 GLAKLDEEEN-------------THISTRVAGTIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLL 626 (756)
Q Consensus 561 Gla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 626 (756)
|+++...... ........++..|+|||.+.+. .++.++|||||||++|||++|+.||...+.....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9997654111 1111223568899999998764 4789999999999999999999999766554433
Q ss_pred HHHHHHHhcCccc---ccc--------ccCCCCC---CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 627 DWALVLKEQGKLM---ELV--------DTNPGSN---FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 627 ~~~~~~~~~~~~~---~~~--------~~~~~~~---~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
............. ... ....... ........+.+++.+|++.+|++||++.|++..
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 2222111111000 000 0000000 001123458899999999999999999999864
No 360
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.3e-34 Score=298.84 Aligned_cols=259 Identities=25% Similarity=0.352 Sum_probs=197.1
Q ss_pred ccccCcccCCCCccEEEeecc-CCcEEEEEEccccCc-ccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEEec
Q 004400 418 FATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK-QGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
|...+.||+|+||.||+|... +++.|+||++..... .......+|+..+++++ |+||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566789999999999999964 578999999865432 22334567999999998 999999999999999999999999
Q ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 495 ENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 495 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
+|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 889999887543 57899999999999999999999986 99999999999999999999999999986543222
Q ss_pred eeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHH-------------HHHHHHhcCccc
Q 004400 574 STRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLD-------------WALVLKEQGKLM 639 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~-------------~~~~~~~~~~~~ 639 (756)
.....|+..|+|||++.+ ..++.++||||||+++|||++|+.||.......... |...........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 123457889999998754 457899999999999999999999996554332221 111110000110
Q ss_pred cccccCCCC---CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 640 ELVDTNPGS---NFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 640 ~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+...... ...+.....+.+++.+||+.+|++||++.|++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000 0000113458899999999999999999998763
No 361
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=9.7e-34 Score=305.08 Aligned_cols=263 Identities=21% Similarity=0.360 Sum_probs=197.4
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------C
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEG------N 485 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 485 (756)
.++|...+.||+|+||.||+|+. .+|+.||+|.+.... ......+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 36889999999999999999994 578999999986532 22335688999999999999999999998754 3
Q ss_pred eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 486 QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
..++|+||+.. +|.++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 46999999975 676654 236899999999999999999999986 99999999999999999999999999976
Q ss_pred CcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh----------
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE---------- 634 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~---------- 634 (756)
..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.............
T Consensus 167 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T cd07879 167 ADAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL 242 (342)
T ss_pred CCCCC----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 43321 23467889999999876 4688999999999999999999999976553322211111000
Q ss_pred -cCccc---cccccCCCCCC---CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--hccCcc
Q 004400 635 -QGKLM---ELVDTNPGSNF---DKEQVMVMINVALLCANASPTIRPSMSSVLRM--LECGVD 688 (756)
Q Consensus 635 -~~~~~---~~~~~~~~~~~---~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~--L~~~~~ 688 (756)
..... ......+.... .+.....+.+++.+||+.||++||++.++++. ++...+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 243 EDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000 00000000000 00122347899999999999999999999854 665544
No 362
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=7.8e-34 Score=305.84 Aligned_cols=261 Identities=23% Similarity=0.345 Sum_probs=194.6
Q ss_pred cCccccCcccCCCCccEEEeec-cCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC----------
Q 004400 416 NNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEG---------- 484 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---------- 484 (756)
.+|...+.||+|+||.||+|.. .+++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788999999999999999994 57899999998766555667789999999999999999999876543
Q ss_pred ----CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-CCCEEEcc
Q 004400 485 ----NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISD 559 (756)
Q Consensus 485 ----~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-~~~~kl~D 559 (756)
...++||||++ ++|.+++.. ..+++..+..++.||+.||+|||+.| |+||||||+||+++. ++.+||+|
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECC
Confidence 35799999997 588888753 36899999999999999999999987 999999999999974 55789999
Q ss_pred CCccccCcccCcc--eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHH---
Q 004400 560 FGLAKLDEEENTH--ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLK--- 633 (756)
Q Consensus 560 FGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~--- 633 (756)
||.++........ ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||...+............
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9999765332211 1122457889999998755 568889999999999999999999996554322211100000
Q ss_pred ---hcCc----cccccc-cCCCCC-----CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 634 ---EQGK----LMELVD-TNPGSN-----FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 634 ---~~~~----~~~~~~-~~~~~~-----~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.... ...... ...... ..+.....+.+++.+|++.||++||++.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 000000 000000 001123458899999999999999999999753
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.5e-33 Score=291.48 Aligned_cols=248 Identities=24% Similarity=0.375 Sum_probs=194.7
Q ss_pred CccccCcccCCCCccEEEeecc-CCcEEEEEEcccc-----CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSK-----SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
+|...+.||+|+||.||+|... .+..+++|.++.. .......+.+|+.++++++||||+++++++.++...++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4677899999999999999854 3445556655432 122334577899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 491 YEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
|||+++++|.+++.. ....+++..+..++.|++.||+|||+.| ++|+||||+||+++. +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998863 3457899999999999999999999986 999999999999986 569999999987654
Q ss_pred ccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 568 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
.... ......|+..|+|||...+..++.++||||||+++|+|++|+.||........... .. .+..
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~---~~-~~~~--------- 222 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR---IV-EGPT--------- 222 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH---HH-cCCC---------
Confidence 3222 22335688899999999888899999999999999999999999965443222211 11 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+......+.+++.+||+.+|++||++.|+++.
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11122334458899999999999999999999763
No 364
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-34 Score=288.41 Aligned_cols=264 Identities=28% Similarity=0.394 Sum_probs=201.4
Q ss_pred hhcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHh--CCCCceeeEeeEEEeC----CeE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISA--LQHPNLVKLYGCCIEG----NQL 487 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~ 487 (756)
..++....+.||+|.||.||+|.|. |..||||++... +++.+.+|.++.+. ++|+||+.+++.=..+ .++
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 3457778899999999999999997 788999999643 44677788887765 5999999999885433 368
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc-----CCCCCeEcCCCCCCceEecCCCCEEEccCCc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHG-----ESRIKVVHRDIKATNVLLDKDLNSKISDFGL 562 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~-----~g~~~iiH~Dikp~Nill~~~~~~kl~DFGl 562 (756)
|||.+|.+.|||.|+|.. ..++.....+++..+|.||++||. +|.|.|.|||||+.|||+.+++...|+|+|+
T Consensus 285 wLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 999999999999999976 479999999999999999999994 4788999999999999999999999999999
Q ss_pred cccCcccCcce---eeccccCccCCchHhhhcC----CC--CcccchhhHHHHHHHHHh----C------CCCCCccchh
Q 004400 563 AKLDEEENTHI---STRVAGTIGYMAPEYAMRG----HL--TEKADVYSFGIVALEIVS----G------RSNVTKEDMF 623 (756)
Q Consensus 563 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~----~~--~~~~Dv~slGv~l~ellt----g------~~p~~~~~~~ 623 (756)
|-......... ....+||-+|||||++... .+ -..+||||||.++||++. | +.||...-+.
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~ 442 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS 442 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC
Confidence 97655442221 3346899999999999642 12 236999999999999975 2 2465322111
Q ss_pred h--HHHHHHHHHhcCccccccccCCC-CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 624 Y--LLDWALVLKEQGKLMELVDTNPG-SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 624 ~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
+ .-+...++. .+.+.+... ...+.+.+..+.++++.||..+|..|-|+-.+-+.|.+..+
T Consensus 443 DPs~eeMrkVVC-----v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 443 DPSFEEMRKVVC-----VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCHHHHhccee-----ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1 001000011 111122222 23345677789999999999999999999999988886544
No 365
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.9e-33 Score=299.92 Aligned_cols=263 Identities=24% Similarity=0.366 Sum_probs=198.5
Q ss_pred hHHHhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeC--
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEG-- 484 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-- 484 (756)
.+...+++|...+.||+|+||.||+|. ..+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~ 90 (345)
T cd07877 11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 90 (345)
T ss_pred HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccc
Confidence 455577899999999999999999998 5678999999986532 22345688899999999999999999988643
Q ss_pred ----CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 485 ----NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 485 ----~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
...+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 91 ~~~~~~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 91 LEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred ccccccEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEecc
Confidence 3467888876 7799887753 36899999999999999999999987 999999999999999999999999
Q ss_pred CccccCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc----
Q 004400 561 GLAKLDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ---- 635 (756)
Q Consensus 561 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~---- 635 (756)
|+++..... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..............
T Consensus 165 g~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
T cd07877 165 GLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 240 (345)
T ss_pred ccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999754332 223467889999999876 46889999999999999999999999654432221111000000
Q ss_pred -------C---ccccccccCCCCCCC---HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 636 -------G---KLMELVDTNPGSNFD---KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 636 -------~---~~~~~~~~~~~~~~~---~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
. .........+...+. ......+.+++.+|++.+|.+||++.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 241 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 000000000000000 0123357899999999999999999998764
No 366
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.7e-33 Score=301.70 Aligned_cols=258 Identities=22% Similarity=0.345 Sum_probs=195.8
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCC-----
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGN----- 485 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 485 (756)
..++|...+.||+|+||.||+|. ..+++.||||++.... ......+.+|++++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 46789999999999999999998 5679999999986432 223356889999999999999999999987653
Q ss_pred -eEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 486 -QLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 486 -~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||++.
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~ 166 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 166 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccccc
Confidence 468999999 7799888753 36899999999999999999999986 9999999999999999999999999998
Q ss_pred cCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc--------
Q 004400 565 LDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ-------- 635 (756)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-------- 635 (756)
...... ....+++.|+|||.+.+ ..++.++||||+||++|++++|+.||...+..............
T Consensus 167 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 167 QTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred ccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 654321 23467889999999876 45889999999999999999999999755432211100000000
Q ss_pred ---CccccccccCCCC------CCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 636 ---GKLMELVDTNPGS------NFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 636 ---~~~~~~~~~~~~~------~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
..........+.. .........+.+++.+|++.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000 000112234789999999999999999999983
No 367
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.9e-33 Score=299.29 Aligned_cols=261 Identities=25% Similarity=0.325 Sum_probs=193.1
Q ss_pred CccccCcccCCCCccEEEeecc-C--CcEEEEEEcccc--CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC----Ce
Q 004400 417 NFATDNNIGEGGFGPVYKGLLA-D--GTAIAVKQLSSK--SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEG----NQ 486 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 486 (756)
+|+..+.||+|+||.||+|... + +..||+|.+... .....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677889999999999999954 4 789999998643 222346788899999999 599999999976432 45
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
.++++||+. ++|.+++... ..+++..+..++.||+.||+|||+.| |+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 788899886 5898888543 47899999999999999999999987 999999999999999999999999999865
Q ss_pred cccCcc---eeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhc-------
Q 004400 567 EEENTH---ISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQ------- 635 (756)
Q Consensus 567 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~------- 635 (756)
...... ......||..|+|||++.+ ..++.++||||+||++|++++|+.||...+..............
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 432211 1233568999999998866 46899999999999999999999999665433222111110000
Q ss_pred ----Ccc---ccccccCCCCC---CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 636 ----GKL---MELVDTNPGSN---FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 636 ----~~~---~~~~~~~~~~~---~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
... .......+... ..+.....+.+++.+|++.+|++|||+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 00000000000 001123458899999999999999999998643
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.2e-33 Score=299.06 Aligned_cols=260 Identities=24% Similarity=0.346 Sum_probs=198.0
Q ss_pred HhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEe-CCeEE
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIE-GNQLL 488 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~ 488 (756)
..+++|...+.||+|+||.||+|. ..+++.||+|++... .....+.+.+|++++++++||||++++++|.. ....+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 467889999999999999999998 558999999987543 22334678899999999999999999999876 56789
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||+|+||++++++.+||+|||.+.....
T Consensus 87 lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 87 FVTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 999998 5689888753 35788889999999999999999986 99999999999999999999999999975432
Q ss_pred cCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh-----------cC
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE-----------QG 636 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~-----------~~ 636 (756)
.. ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+............. ..
T Consensus 161 ~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 161 QM----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred Cc----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch
Confidence 21 23457889999998766 5689999999999999999999999965543222111110000 00
Q ss_pred ccccccccC-CCCCCCH-----HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 637 KLMELVDTN-PGSNFDK-----EQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 637 ~~~~~~~~~-~~~~~~~-----~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
...+.+... .....+. .....+.+++.+|++.+|++||++.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000111 123458899999999999999999999765
No 369
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=289.49 Aligned_cols=242 Identities=24% Similarity=0.352 Sum_probs=201.4
Q ss_pred hcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC---cccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS---KQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 489 (756)
..+|.....||+|+||.|..|..+ +...+|||+++++. .++.+--+.|-++|+.. +-|.++++..+|+.-+++|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 347888999999999999999854 56789999998762 22333445677787766 56899999999999999999
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
||||+.||+|--++++-+ ++.++.+..+|..||-||-+||++| ||+||||.+|||+|.+|.+||+|||+++.---+
T Consensus 428 VMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccccC
Confidence 999999999998887654 7899999999999999999999997 999999999999999999999999999843222
Q ss_pred CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
. ....+++||+.|+|||++....|+..+|.|||||++|||+.|+.||.++++..+.... .+.+ ..
T Consensus 504 ~-~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI------------~ehn--vs 568 (683)
T KOG0696|consen 504 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI------------MEHN--VS 568 (683)
T ss_pred C-cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH------------HHcc--Cc
Confidence 2 2245689999999999999999999999999999999999999999998877665422 1111 23
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCC
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPS 675 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt 675 (756)
++...+.+.+.++...+...|.+|--
T Consensus 569 yPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 569 YPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred CcccccHHHHHHHHHHhhcCCccccC
Confidence 44455566888899999999999964
No 370
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-34 Score=277.42 Aligned_cols=254 Identities=19% Similarity=0.298 Sum_probs=196.9
Q ss_pred cCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEecCCCC
Q 004400 421 DNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYLENNS 498 (756)
Q Consensus 421 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~gs 498 (756)
.+.||+|+|+.|--++ +.+|.+||||++.+.......++.+|++++... .|+||++++++|+++..+|||||-|.||+
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence 3689999999999998 789999999999887777778899999999998 59999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC---EEEccCCccccCcc--cC---
Q 004400 499 LARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN---SKISDFGLAKLDEE--EN--- 570 (756)
Q Consensus 499 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~---~kl~DFGla~~~~~--~~--- 570 (756)
|..+++++. .+++.++.++..+||.||.+||.+| |.|||+||+|||-..... +|||||.++.-... +-
T Consensus 163 lLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 163 LLSHIQKRK-HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred HHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 999997654 7999999999999999999999997 999999999999976544 79999988753321 11
Q ss_pred -cceeeccccCccCCchHhhh-----cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHH----HHhcCcccc
Q 004400 571 -THISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALV----LKEQGKLME 640 (756)
Q Consensus 571 -~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~ 640 (756)
+..-.+.+|+..|||||+.. ...|+.++|.||+|||+|-|++|..||.+.-.. ...|... ..+..-...
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~-dCGWdrGe~Cr~CQ~~LFes 317 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA-DCGWDRGEVCRVCQNKLFES 317 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC-cCCccCCCccHHHHHHHHHH
Confidence 11223457889999999874 246899999999999999999999999544321 1112110 000000000
Q ss_pred ccccCCCCCCCH----HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 641 LVDTNPGSNFDK----EQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 641 ~~~~~~~~~~~~----~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
+-+. .-.|+. .......+++...+..++.+|-++.+++.
T Consensus 318 IQEG--kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 318 IQEG--KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred Hhcc--CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0000 011222 22335667888888999999999999977
No 371
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=289.84 Aligned_cols=255 Identities=25% Similarity=0.393 Sum_probs=198.9
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcc-------cHHHHHHHHHHHHhCCCCceeeEeeEEE-eC
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQ-------GNREFINEIGMISALQHPNLVKLYGCCI-EG 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~ 484 (756)
..++|-..++||+|||+.||+|. +...+.||||+-.....+ -.+...+|..|-+.+.||-||++|+||. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 34567788999999999999998 677899999987543222 1245678999999999999999999997 55
Q ss_pred CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC---CCCEEEccCC
Q 004400 485 NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFG 561 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~---~~~~kl~DFG 561 (756)
+.+|-|+|||+|.+|+.+|..++ .+++.+++.|+.||..||.||.+. .++|||-||||.|||+.. -|.+||+|||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 77899999999999999997664 789999999999999999999988 578999999999999954 4679999999
Q ss_pred ccccCcccCcc------eeeccccCccCCchHhhhc----CCCCcccchhhHHHHHHHHHhCCCCCCccc-hhhHHHHHH
Q 004400 562 LAKLDEEENTH------ISTRVAGTIGYMAPEYAMR----GHLTEKADVYSFGIVALEIVSGRSNVTKED-MFYLLDWAL 630 (756)
Q Consensus 562 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slGv~l~elltg~~p~~~~~-~~~~~~~~~ 630 (756)
++++++.+... .....+||.+|++||.+.- ...+.|+||||.|||+|+++.|+.||.... ..+++....
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 99988754332 3456789999999998854 357899999999999999999999995442 223332221
Q ss_pred HHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q 004400 631 VLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSV 679 (756)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev 679 (756)
++.. .++ .+. +.. ........+|++|++..-++|....++
T Consensus 699 IlkA-tEV-qFP---~KP----vVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 699 ILKA-TEV-QFP---PKP----VVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred hhcc-eec-cCC---CCC----ccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 1111 000 111 111 122346788999999999999887765
No 372
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-34 Score=294.11 Aligned_cols=244 Identities=25% Similarity=0.362 Sum_probs=202.2
Q ss_pred ccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 420 TDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 420 ~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
.++.||+|-||+||-|. .++|+.||||++.+. .+.....+.+|+.||++++||.||.+--.|+..++++.|||-+.|
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 35799999999999999 568999999999764 344557889999999999999999999999999999999999987
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC---CCCEEEccCCccccCcccCcce
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~---~~~~kl~DFGla~~~~~~~~~~ 573 (756)
.=|+-.|.....++++.....++.||+.||.|||.++ |+|+|+||+|||+.+ ..++||||||+||++++....
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR- 723 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR- 723 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhhh-
Confidence 6666666677778999999999999999999999986 999999999999964 356999999999998875433
Q ss_pred eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHH
Q 004400 574 STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKE 653 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (756)
..++||+.|+|||+++.+.|...-|+||.|||+|.-++|..||..++..... . ....-+..+.++...++
T Consensus 724 -rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQ--I------QNAaFMyPp~PW~eis~- 793 (888)
T KOG4236|consen 724 -RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQ--I------QNAAFMYPPNPWSEISP- 793 (888)
T ss_pred -hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHH--h------hccccccCCCchhhcCH-
Confidence 4578999999999999999999999999999999999999999655432211 1 11222334444444443
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004400 654 QVMVMINVALLCANASPTIRPSMSSVL 680 (756)
Q Consensus 654 ~~~~l~~l~~~c~~~~P~~RPt~~ev~ 680 (756)
..+++|...++..-++|-+.++-+
T Consensus 794 ---~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 794 ---EAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ---HHHHHHHHHHHHHHHHhcchHhhc
Confidence 477888888999889999988764
No 373
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=251.28 Aligned_cols=260 Identities=23% Similarity=0.353 Sum_probs=201.7
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccC--cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS--KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+|+..++||+|.||+||+|+ +.++..||+|++..+. ...-....+|+.+++.++|+|||++++....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 46667899999999999999 6678899999987543 23346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI 573 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 573 (756)
|.. +|..+.......++.+.+..++.|+++||.++|++. +.|||+||.|.+++.+|..|++|||+++.++-.....
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvrcy 158 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY 158 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceEee
Confidence 965 788887777778999999999999999999999985 9999999999999999999999999999877655443
Q ss_pred eeccccCccCCchHhhhcCC-CCcccchhhHHHHHHHHHhC-CCCCCccchhhHHHHHHHHHh---cCc---cccccccC
Q 004400 574 STRVAGTIGYMAPEYAMRGH-LTEKADVYSFGIVALEIVSG-RSNVTKEDMFYLLDWALVLKE---QGK---LMELVDTN 645 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg-~~p~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~ 645 (756)
+.. +-|.+|.+|.++.+.+ |++..|+||-||++.|+... ++.|.+.+..+.+........ ++. ...+.|-.
T Consensus 159 sae-vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk 237 (292)
T KOG0662|consen 159 SAE-VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK 237 (292)
T ss_pred ece-eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence 333 4589999999999865 89999999999999999974 444555554443332222211 111 12233333
Q ss_pred CCCCCCHHH---------HHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 646 PGSNFDKEQ---------VMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 646 ~~~~~~~~~---------~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
+...+++.. ...=.++++..+.-+|.+|.++++.++
T Consensus 238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 333333221 113456777888888999998887665
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.5e-33 Score=301.98 Aligned_cols=259 Identities=23% Similarity=0.383 Sum_probs=198.4
Q ss_pred hhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCe----
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQ---- 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 486 (756)
..++|...+.||+|+||.||+|+. .+++.||+|.+... .......+.+|+.++++++||||+++++++..++.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 457899999999999999999995 46889999998653 22234567789999999999999999998876654
Q ss_pred --EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 487 --LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 487 --~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+.| |+||||||+||+++.++.+||+|||++.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999999 5699998864 36899999999999999999999986 9999999999999999999999999998
Q ss_pred cCcccCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc------
Q 004400 565 LDEEENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK------ 637 (756)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 637 (756)
..... .....++..|+|||.+.+ ..++.++|||||||++||+++|+.||...+................
T Consensus 167 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 167 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred ccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 65432 223467889999999875 3678999999999999999999999966554332221111100000
Q ss_pred --------cccccccCCCCCCC---HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 --------LMELVDTNPGSNFD---KEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 --------~~~~~~~~~~~~~~---~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
....+.......+. ......+.+++.+|++.+|++|||+.+|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000000000000 0123458899999999999999999999763
No 375
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-35 Score=277.12 Aligned_cols=254 Identities=26% Similarity=0.372 Sum_probs=193.5
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccCc-ccHHHHHHHHHHHH-hCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSK-QGNREFINEIGMIS-ALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+.+....||.|+||+|+|.. .+.|+..|||+++.... ...+++..|.+... .-+.||||++||++..++..|+.||.
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34455689999999999998 45799999999976543 45567888888654 45799999999999999999999999
Q ss_pred cCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 494 LENNSLARALF----EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 494 ~~~gsL~~~l~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|+- |++.+-. .....+++.-.-+|.....+||.||-+.- +|||||+||+|||+|..|.+||||||++-...+.
T Consensus 145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence 965 6654332 23457888888999999999999998764 7999999999999999999999999998654432
Q ss_pred CcceeeccccCccCCchHhhhc--CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 570 NTHISTRVAGTIGYMAPEYAMR--GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
...+.-+|-..|||||.+.. ..|+-++||||+|+.+||+.||+.|+...+. .++....... +....+....-
T Consensus 222 --iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~-gdpp~l~~~~~- 295 (361)
T KOG1006|consen 222 --IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVI-GDPPILLFDKE- 295 (361)
T ss_pred --HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHc-CCCCeecCccc-
Confidence 22344578889999999864 3489999999999999999999999965432 2222211111 11111111111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+....+..++..|+.+|-++||.+.++.++
T Consensus 296 ---~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 296 ---CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ---ccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11234458999999999999999999998654
No 376
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-32 Score=282.87 Aligned_cols=236 Identities=26% Similarity=0.352 Sum_probs=192.8
Q ss_pred ccCCCCccEEEeecc-CCcEEEEEEccccCc---ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCH
Q 004400 424 IGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK---QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSL 499 (756)
Q Consensus 424 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 499 (756)
||+|+||.||++... +++.||+|.+..... .....+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999954 689999999875422 2345788999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeecccc
Q 004400 500 ARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAG 579 (756)
Q Consensus 500 ~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~g 579 (756)
.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ ......+
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~ 155 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS-RTNTFCG 155 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCC-cccCCcC
Confidence 99997553 6899999999999999999999986 99999999999999999999999999976544321 2234568
Q ss_pred CccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHH
Q 004400 580 TIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMI 659 (756)
Q Consensus 580 t~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 659 (756)
+..|+|||...+...+.++|+||||+++|++++|+.||...+........ .. .. ..++......+.
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~-~~----------~~~~~~~~~~l~ 221 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKI---LK-DP----------LRFPEFLSPEAR 221 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---hc-CC----------CCCCCCCCHHHH
Confidence 88999999998888899999999999999999999999655432222211 11 00 011111134488
Q ss_pred HHHHHhhcCCCCCCCCHHH
Q 004400 660 NVALLCANASPTIRPSMSS 678 (756)
Q Consensus 660 ~l~~~c~~~~P~~RPt~~e 678 (756)
+++.+||..||++||++.+
T Consensus 222 ~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHhcCCHhhCCCccc
Confidence 9999999999999999943
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.3e-32 Score=319.09 Aligned_cols=145 Identities=28% Similarity=0.423 Sum_probs=130.6
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999954 78999999986542 222367888999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK 564 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~ 564 (756)
||+.+++|.+++... ..+++..++.++.||+.||+|||..+ ||||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998654 36889999999999999999999986 9999999999999999999999999986
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=297.95 Aligned_cols=240 Identities=23% Similarity=0.329 Sum_probs=194.0
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 491 (756)
.+..|.....+|.|+|+.|-.+. ..+++..+||++.+.. .+-.+|+.++... .||||+++.+.+.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 46778888889999999999998 5678999999997652 2334577666665 7999999999999999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe-cCCCCEEEccCCccccCcccC
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL-DKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill-~~~~~~kl~DFGla~~~~~~~ 570 (756)
|.+.||-+.+.+.... .+. ..+..|+.+|+.|+.|||++| |||||+||+|||+ ++.+.++|+|||.++.....
T Consensus 396 e~l~g~ell~ri~~~~-~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKP-EFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hhccccHHHHHHHhcc-hhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9999999888886543 222 778889999999999999997 9999999999999 58899999999999876554
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh-hHHHHHHHHHhcCccccccccCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF-YLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
..+.+-|..|.|||++....|++++|+||||++||+|++|+.||...... .+.. .+. ...
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~-------------~i~---~~~ 530 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT-------------RIQ---MPK 530 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH-------------hhc---CCc
Confidence 22335688999999999999999999999999999999999999543221 1111 111 111
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+....+....+++.+|++.||.+||+|.++...
T Consensus 531 ~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 531 FSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred cccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 223334458899999999999999999999764
No 379
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=293.59 Aligned_cols=243 Identities=22% Similarity=0.314 Sum_probs=202.4
Q ss_pred hcCccccCcccCCCCccEEEeeccCCc-EEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGT-AIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 490 (756)
..+++....||-||||.|=.+...... .+|+|.+++. .....+.+..|-.+|...+.|.||++|..|.+..++|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 456677788999999999998865443 4888888764 344556678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
||-|-||.+...|+.. ..++..++..++..+.+|++|||.+| ||+|||||+|.++|.+|.+||.|||+|+......
T Consensus 499 mEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 499 MEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 9999999999999655 47999999999999999999999997 9999999999999999999999999999877655
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
.. -+++||+.|.|||++..+..+.++|.||+|+++||+++|.+||.+.+.+..... +.+. -+.. .+
T Consensus 575 KT--wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~--ILkG-id~i---------~~ 640 (732)
T KOG0614|consen 575 KT--WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL--ILKG-IDKI---------EF 640 (732)
T ss_pred ce--eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH--HHhh-hhhh---------hc
Confidence 44 358999999999999999999999999999999999999999988776544322 2221 1111 22
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCC
Q 004400 651 DKEQVMVMINVALLCANASPTIRPS 675 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt 675 (756)
+........+++++....+|.+|--
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhc
Confidence 3333345778888888899999975
No 380
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-33 Score=266.81 Aligned_cols=252 Identities=20% Similarity=0.252 Sum_probs=192.9
Q ss_pred hcCccc-cCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHh-CCCCceeeEeeEEEe----CCeE
Q 004400 415 TNNFAT-DNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISA-LQHPNLVKLYGCCIE----GNQL 487 (756)
Q Consensus 415 ~~~~~~-~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~ 487 (756)
+++|.+ .++||-|-.|.|-.+. ..+|..+|+|++... ....+|++.--. -.|||||.++++|.. ...+
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 444544 2689999999999998 457899999998543 345778886433 479999999999864 4567
Q ss_pred EEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC---CCCEEEccCCcc
Q 004400 488 LLIYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---DLNSKISDFGLA 563 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~---~~~~kl~DFGla 563 (756)
.+|||.|+||.|...+.+++ ..+++.++..|+.||+.|+.|||+. +|.||||||+|+|... |..+||+|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccc
Confidence 89999999999999998554 4699999999999999999999988 5999999999999975 455899999999
Q ss_pred ccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccc
Q 004400 564 KLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 643 (756)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (756)
+....... ..+.+-|+.|.|||++-..+|+..+|+||+||++|-|++|.+||+......+--- +.......+.-
T Consensus 212 K~t~~~~~--L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispg---Mk~rI~~gqy~- 285 (400)
T KOG0604|consen 212 KETQEPGD--LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG---MKRRIRTGQYE- 285 (400)
T ss_pred cccCCCcc--ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChh---HHhHhhccCcc-
Confidence 96554222 2445779999999999999999999999999999999999999976543221110 00000000000
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 644 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 644 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
-+... ....++...++++..+..+|++|-|+.++++.
T Consensus 286 -FP~pE-Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 286 -FPEPE-WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -CCChh-HhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 01011 12345567889999999999999999999764
No 381
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.6e-32 Score=277.10 Aligned_cols=220 Identities=21% Similarity=0.197 Sum_probs=176.1
Q ss_pred CCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHHHHHHh
Q 004400 427 GGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFE 505 (756)
Q Consensus 427 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 505 (756)
|.+|.||+++ ..+++.||+|.+.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 8999999999 4678999999986542 234455566666799999999999999999999999999999999875
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccCccCCc
Q 004400 506 HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMA 585 (756)
Q Consensus 506 ~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a 585 (756)
.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++|||.+....... ....++..|+|
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~y~a 150 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----DGEAVENMYCA 150 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc----ccCCcCccccC
Confidence 43 6899999999999999999999986 9999999999999999999999999876544321 22345778999
Q ss_pred hHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHh
Q 004400 586 PEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLC 665 (756)
Q Consensus 586 PE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 665 (756)
||.+.+..++.++||||+|+++|||++|+.|+...... ....... ..+......+.+++.+|
T Consensus 151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------------~~~~~~~----~~~~~~~~~~~~li~~~ 212 (237)
T cd05576 151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--------------INTHTTL----NIPEWVSEEARSLLQQL 212 (237)
T ss_pred CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------------ccccccc----CCcccCCHHHHHHHHHH
Confidence 99998888999999999999999999999876422110 0000000 01111233488899999
Q ss_pred hcCCCCCCCCHH
Q 004400 666 ANASPTIRPSMS 677 (756)
Q Consensus 666 ~~~~P~~RPt~~ 677 (756)
++.||++||++.
T Consensus 213 l~~dp~~R~~~~ 224 (237)
T cd05576 213 LQFNPTERLGAG 224 (237)
T ss_pred ccCCHHHhcCCC
Confidence 999999999973
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.6e-32 Score=296.31 Aligned_cols=256 Identities=28% Similarity=0.414 Sum_probs=208.5
Q ss_pred hHHHhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEe----
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIE---- 483 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 483 (756)
.+...++-|++.+.||.|.+|.||+++ .++++.+|+|+..... ...+++..|.++++.+ .|||++.+||+|..
T Consensus 13 ~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 13 SLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred hCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 344567789999999999999999999 6678999999987653 3456788899999988 69999999999864
Q ss_pred -CCeEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCC
Q 004400 484 -GNQLLLIYEYLENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFG 561 (756)
Q Consensus 484 -~~~~~lV~e~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFG 561 (756)
++.+|||||||.+||..|++.. .+..+.|..+..|++.++.|+.+||... ++|||||-.|||++.++.||++|||
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeee
Confidence 5789999999999999999973 3668999999999999999999999884 9999999999999999999999999
Q ss_pred ccccCcccCcceeeccccCccCCchHhhhc-----CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcC
Q 004400 562 LAKLDEEENTHISTRVAGTIGYMAPEYAMR-----GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQG 636 (756)
Q Consensus 562 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 636 (756)
.+....... ....+..||+.|||||++.. ..|+..+|+||+|++..||.-|.+|+...-....
T Consensus 169 vSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra----------- 236 (953)
T KOG0587|consen 169 VSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA----------- 236 (953)
T ss_pred eeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-----------
Confidence 997544322 22345789999999999964 3477899999999999999999999854432211
Q ss_pred ccccccc-cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 637 KLMELVD-TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+..++. +.+...-+.....++.++|..|+..|.++||++.++++.
T Consensus 237 -LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 237 -LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 111221 122223355667789999999999999999999998654
No 383
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=3.3e-32 Score=285.69 Aligned_cols=209 Identities=24% Similarity=0.417 Sum_probs=177.4
Q ss_pred hhhHHHhh---cCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCCCceeeEeeE
Q 004400 408 YLQIKAAT---NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS---KQGNREFINEIGMISALQHPNLVKLYGC 480 (756)
Q Consensus 408 ~~~~~~~~---~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~ 480 (756)
|.+++.+. .-|..++.||-|+||.|..++ ..+...||+|.+.+++ .........|-.||.....+=||++|..
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 44555543 458889999999999999998 5556789999998753 3334567889999999999999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccC
Q 004400 481 CIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDF 560 (756)
Q Consensus 481 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DF 560 (756)
|.+++.+|+||||++||++-.+|.+.+ .+.+.-++.++..+..|+++.|..| +|||||||+|||||.+|.+||+||
T Consensus 698 FQDkdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 698 FQDKDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred eccCCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeec
Confidence 999999999999999999999998765 6888999999999999999999997 999999999999999999999999
Q ss_pred CccccCc---c-----cCcc---------------------------------eeeccccCccCCchHhhhcCCCCcccc
Q 004400 561 GLAKLDE---E-----ENTH---------------------------------ISTRVAGTIGYMAPEYAMRGHLTEKAD 599 (756)
Q Consensus 561 Gla~~~~---~-----~~~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~D 599 (756)
|++.-+. + .+.+ .....+||+.|+|||++.+..|+.-+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9986221 1 0000 001246999999999999999999999
Q ss_pred hhhHHHHHHHHHhCCCCCCcc
Q 004400 600 VYSFGIVALEIVSGRSNVTKE 620 (756)
Q Consensus 600 v~slGv~l~elltg~~p~~~~ 620 (756)
.||.|||||||+.|+.||...
T Consensus 854 wws~gvil~em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLAD 874 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCC
Confidence 999999999999999999544
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1e-33 Score=267.00 Aligned_cols=264 Identities=24% Similarity=0.374 Sum_probs=199.3
Q ss_pred hcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc-Cc-ccHHHHHHHHHHHHhCCCCceeeEeeEEEe--------
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK-SK-QGNREFINEIGMISALQHPNLVKLYGCCIE-------- 483 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 483 (756)
...|....+||+|.||.||+|+. .+|+.||+|++-.. .+ .--....+|+.+|..++|+|++.+++.|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 34566678999999999999994 56788898765432 22 223567899999999999999999998864
Q ss_pred CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcc
Q 004400 484 GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLA 563 (756)
Q Consensus 484 ~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla 563 (756)
...+|+|+++|+. +|.-.|.....+++..++.+++.++..||.|+|.. .|+|||+||.|+|++.++.+||+|||++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccc
Confidence 2358999999987 78888877778899999999999999999999987 4999999999999999999999999999
Q ss_pred ccCcccCcce---eeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc--
Q 004400 564 KLDEEENTHI---STRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-- 637 (756)
Q Consensus 564 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 637 (756)
+.+....... .+..+-|.+|.+||.+.+ ++|+++.|||+-||++.||+||.+-+.+......+.........-.
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 8654332221 233455899999999987 5799999999999999999999888877665544443333322110
Q ss_pred ---------cccccccC--CCCCCC--HHHH------HHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 ---------LMELVDTN--PGSNFD--KEQV------MVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 ---------~~~~~~~~--~~~~~~--~~~~------~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
+.+.+... +...+. ++.. ....+++..++..||.+|+++++++..
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 11111000 111110 0111 146688889999999999999998764
No 385
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=5e-32 Score=270.30 Aligned_cols=261 Identities=22% Similarity=0.326 Sum_probs=210.2
Q ss_pred hhhHHHhhcCccccCcccCCCCccEEEeecc------CCcEEEEEEcccc-CcccHHHHHHHHHHHHhCCCCceeeEeeE
Q 004400 408 YLQIKAATNNFATDNNIGEGGFGPVYKGLLA------DGTAIAVKQLSSK-SKQGNREFINEIGMISALQHPNLVKLYGC 480 (756)
Q Consensus 408 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 480 (756)
..++.....++.....+-+|.||+||+|.|. +.+.|.+|.++.. +......+.+|.-.+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3455555667888899999999999999654 3456778877653 44455678999999999999999999999
Q ss_pred EEeC-CeEEEEEEecCCCCHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC
Q 004400 481 CIEG-NQLLLIYEYLENNSLARALFE-------HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD 552 (756)
Q Consensus 481 ~~~~-~~~~lV~e~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~ 552 (756)
+.++ ...+.+|.++.-|+|..+|.. ..+.++..+...++.|++.|++|||.+| |||.||..+|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 8765 567889999999999999982 2345677788899999999999999997 9999999999999999
Q ss_pred CCEEEccCCccccCcccCcce-eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHH
Q 004400 553 LNSKISDFGLAKLDEEENTHI-STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWAL 630 (756)
Q Consensus 553 ~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 630 (756)
.++||+|=.++|..-+.+.+. ...--.+..||+||.+.+..|+.++|||||||++|||+| |+.|+..-++++...+.
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl- 511 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL- 511 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH-
Confidence 999999999999765554443 223345678999999999999999999999999999998 99999766666544332
Q ss_pred HHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 631 VLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.++.+...+.. ++.++..++..||...|++||+++|++..|.
T Consensus 512 ---kdGyRlaQP~N---------CPDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 512 ---KDGYRLAQPFN---------CPDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred ---hccceecCCCC---------CcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 23333332222 2234889999999999999999999998886
No 386
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-32 Score=264.03 Aligned_cols=247 Identities=22% Similarity=0.318 Sum_probs=194.8
Q ss_pred hhcCccccCcccCCCCccEEEeec-cCCcEEEEEEcccc---CcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSK---SKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 488 (756)
..++|+..+.||+|+|++|..+++ ++.+.||+|++++. ..++..-...|-.+..+. +||.+|-+..+|+.+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 356899999999999999999994 56788999999764 233334456677777666 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
+|.||++||+|..++++.+ +++++.++.+...|.-||.|||++| ||.||+|.+|||+|.+|.+|++|+|+++.--.
T Consensus 328 fvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCC
Confidence 9999999999988886554 8999999999999999999999998 99999999999999999999999999984322
Q ss_pred cCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccc----hhhHHHHHHHHHhcCcccccccc
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKED----MFYLLDWALVLKEQGKLMELVDT 644 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 644 (756)
+ ...+++++||+.|.|||++.+..|+..+|.|++||+++||+.|+.||.-.. ....-++...+.-++.+
T Consensus 404 ~-gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi------ 476 (593)
T KOG0695|consen 404 P-GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI------ 476 (593)
T ss_pred C-CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc------
Confidence 2 233567899999999999999999999999999999999999999993211 11111221111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCCCCCC
Q 004400 645 NPGSNFDKEQVMVMINVALLCANASPTIRPS 675 (756)
Q Consensus 645 ~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt 675 (756)
..+....-+...+++..+.+||.+|--
T Consensus 477 ----riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 477 ----RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ----cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 111222223556778889999999863
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.1e-31 Score=293.43 Aligned_cols=257 Identities=20% Similarity=0.240 Sum_probs=181.8
Q ss_pred HhhcCccccCcccCCCCccEEEeec-----------------cCCcEEEEEEccccCcccHH--------------HHHH
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGLL-----------------ADGTAIAVKQLSSKSKQGNR--------------EFIN 461 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~--------------~~~~ 461 (756)
...++|+..++||+|+||.||+|.. .+++.||||++........+ .+..
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 4578999999999999999999963 24568999998654322222 2345
Q ss_pred HHHHHHhCCCCce-----eeEeeEEEe--------CCeEEEEEEecCCCCHHHHHHhcC---------------------
Q 004400 462 EIGMISALQHPNL-----VKLYGCCIE--------GNQLLLIYEYLENNSLARALFEHR--------------------- 507 (756)
Q Consensus 462 E~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~--------------------- 507 (756)
|+.++.+++|.++ ++++++|.. ++..++||||+++|+|.++++...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7777888876654 677888753 356899999999999999986421
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccCccCCc
Q 004400 508 --LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMA 585 (756)
Q Consensus 508 --~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a 585 (756)
..++|..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..............+|+.|+|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 13467889999999999999999986 9999999999999999999999999997544322221222345889999
Q ss_pred hHhhhcCCC----------------------CcccchhhHHHHHHHHHhCCC-CCCccchhh---------HHHHHHHHH
Q 004400 586 PEYAMRGHL----------------------TEKADVYSFGIVALEIVSGRS-NVTKEDMFY---------LLDWALVLK 633 (756)
Q Consensus 586 PE~~~~~~~----------------------~~~~Dv~slGv~l~elltg~~-p~~~~~~~~---------~~~~~~~~~ 633 (756)
||.+..... ..+.||||+||++|||++|.. |+.....+. ...|....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~- 457 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK- 457 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc-
Confidence 998854321 234799999999999999875 663221111 11111100
Q ss_pred hcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCC---CCCCCHHHHHHH
Q 004400 634 EQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASP---TIRPSMSSVLRM 682 (756)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P---~~RPt~~ev~~~ 682 (756)
. ...+-.. .........+++.+++..+| .+|+|+.|+++.
T Consensus 458 -~----~~~~~~~----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 458 -G----QKYDFSL----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred -c----cCCCccc----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0 0001111 11123347788899998766 789999998764
No 388
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=8.9e-32 Score=329.19 Aligned_cols=277 Identities=30% Similarity=0.447 Sum_probs=132.7
Q ss_pred ceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcCCCcEEE
Q 004400 16 KTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTLVNLT 94 (756)
Q Consensus 16 ~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L~~L~ 94 (756)
+..++.|+|++|.+++.+|..|.++++|+.|+|++|.+.+.+|..+..++.|+ |++.+|++.+.+|..|+++++|+.|+
T Consensus 139 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 218 (968)
T PLN00113 139 IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIY 218 (968)
T ss_pred cCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEE
Confidence 34445555555555555555555555555555555555444454444444442 44444444444444444444555555
Q ss_pred eecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcC
Q 004400 95 VQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAG 174 (756)
Q Consensus 95 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 174 (756)
|++|++.+.+|..|+++++|++|+|++|++++.+|..|.++++|+.|+|++|++++.+|..+.++++|++|+|++|.+.+
T Consensus 219 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 298 (968)
T PLN00113 219 LGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG 298 (968)
T ss_pred CcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeecc
Confidence 55554444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred CCCc------------------------cccCCCCCCeEEccCCCCCCCCccccccc-cccEEEcccccccCCCCccccC
Q 004400 175 PIPS------------------------GIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPRYLGK 229 (756)
Q Consensus 175 ~~p~------------------------~~~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~L~~n~l~~~~p~~~~~ 229 (756)
.+|. .+..+++|+.|++++|.+....+..++.. +|+.|+|++|++++.+|..+..
T Consensus 299 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~ 378 (968)
T PLN00113 299 EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS 378 (968)
T ss_pred CCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhC
Confidence 4444 44444444444444444443333333322 2444444444444444444444
Q ss_pred CCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCCCC
Q 004400 230 MTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDG 292 (756)
Q Consensus 230 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~~~ 292 (756)
+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..+ ++.++.+++++|.+++.
T Consensus 379 ~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 443 (968)
T PLN00113 379 SGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGR 443 (968)
T ss_pred cCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCc
Confidence 4444444444444444444444445555555555555555555444 44455555555555443
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=6.5e-31 Score=267.98 Aligned_cols=237 Identities=27% Similarity=0.439 Sum_probs=193.7
Q ss_pred CCccEEEeecc-CCcEEEEEEccccCccc-HHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHHHHHHh
Q 004400 428 GFGPVYKGLLA-DGTAIAVKQLSSKSKQG-NREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFE 505 (756)
Q Consensus 428 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 505 (756)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+||+++++++......++|+||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999965 58999999997654444 67899999999999999999999999999999999999999999999875
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccCccCCc
Q 004400 506 HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMA 585 (756)
Q Consensus 506 ~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a 585 (756)
.. .+++..+..++.++++++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......++..|++
T Consensus 81 ~~-~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ 154 (244)
T smart00220 81 RG-RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMA 154 (244)
T ss_pred cc-CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCC
Confidence 44 3899999999999999999999986 9999999999999999999999999998765432 2234568889999
Q ss_pred hHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCc-cchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHH
Q 004400 586 PEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTK-EDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALL 664 (756)
Q Consensus 586 PE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 664 (756)
||......++.++||||||++++++++|..||.. .+......+. ....... ..... .....+.+++.+
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~----~~~~~~~----~~~~~---~~~~~~~~~i~~ 223 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKI----GKPKPPF----PPPEW---KISPEAKDLIRK 223 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH----hccCCCC----ccccc---cCCHHHHHHHHH
Confidence 9999888899999999999999999999999965 3332222211 1111100 00000 022358899999
Q ss_pred hhcCCCCCCCCHHHHHH
Q 004400 665 CANASPTIRPSMSSVLR 681 (756)
Q Consensus 665 c~~~~P~~RPt~~ev~~ 681 (756)
|+..+|++||++.++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999999986
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.2e-31 Score=301.11 Aligned_cols=258 Identities=21% Similarity=0.255 Sum_probs=171.4
Q ss_pred hhcCccccCcccCCCCccEEEeecc-C----CcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeE------EE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA-D----GTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGC------CI 482 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 482 (756)
..++|...+.||+|+||.||+|+.. + +..||+|++..... .+....| .++...+.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5689999999999999999999954 5 68999998754321 1111111 1222222333222221 24
Q ss_pred eCCeEEEEEEecCCCCHHHHHHhcCCC-------------------CCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCC
Q 004400 483 EGNQLLLIYEYLENNSLARALFEHRLK-------------------LDWPTRRRICLGIARGLAYLHGESRIKVVHRDIK 543 (756)
Q Consensus 483 ~~~~~~lV~e~~~~gsL~~~l~~~~~~-------------------l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dik 543 (756)
.+...++||||+++++|.+++...... .....+..++.|++.||+|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 567899999999999999998743211 112345679999999999999986 9999999
Q ss_pred CCceEecC-CCCEEEccCCccccCcccCcceeeccccCccCCchHhhhcC----------------------CCCcccch
Q 004400 544 ATNVLLDK-DLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRG----------------------HLTEKADV 600 (756)
Q Consensus 544 p~Nill~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv 600 (756)
|+|||++. ++.+||+|||+|+..............||+.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57899999999986654444444567899999999976422 23456799
Q ss_pred hhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc-c---ccccccCCCCC----C--CHHHHHHHHHHHHHhhcCCC
Q 004400 601 YSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK-L---MELVDTNPGSN----F--DKEQVMVMINVALLCANASP 670 (756)
Q Consensus 601 ~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~----~--~~~~~~~l~~l~~~c~~~~P 670 (756)
|||||++|||+++..++.... ......+...+. . ........... + .........+++.+|++.||
T Consensus 363 wSlGviL~el~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNL----IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHH----HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 999999999999776643221 111111111000 0 00000000000 0 00011235589999999999
Q ss_pred CCCCCHHHHHHH
Q 004400 671 TIRPSMSSVLRM 682 (756)
Q Consensus 671 ~~RPt~~ev~~~ 682 (756)
++|||+.|+++.
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999875
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=244.35 Aligned_cols=201 Identities=26% Similarity=0.431 Sum_probs=166.8
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccC-cccHHHHHHHHHHHHh-CCCCceeeEeeEEEeCCeEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKS-KQGNREFINEIGMISA-LQHPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV 490 (756)
..++......||+|++|.|-+.+ ..+|+..|+|.+.... .+..++..+|+.+..+ ..+|.+|.+||.+.++...++.
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 34455566789999999999988 5689999999997653 2334567788887555 4799999999999999999999
Q ss_pred EEecCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 491 YEYLENNSLARALF---EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 491 ~e~~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
||.|.. ||+.+-. ..+..+++...-+|+..+.+||.|||++- .|||||+||+|||++.+|++||||||++-+..
T Consensus 124 ME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 999965 6765443 56778999999999999999999999974 79999999999999999999999999998665
Q ss_pred ccCcceeeccccCccCCchHhhhc----CCCCcccchhhHHHHHHHHHhCCCCCCc
Q 004400 568 EENTHISTRVAGTIGYMAPEYAMR----GHLTEKADVYSFGIVALEIVSGRSNVTK 619 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slGv~l~elltg~~p~~~ 619 (756)
+... .+...|--.|||||.+.. ..|+-|+||||+|+.+.||.+++.||..
T Consensus 201 dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 201 DSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 4322 222457778999999853 3689999999999999999999999943
No 392
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4e-31 Score=264.68 Aligned_cols=258 Identities=21% Similarity=0.308 Sum_probs=198.4
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCC--Cc----eeeEeeEEEeCCe
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQH--PN----LVKLYGCCIEGNQ 486 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~n----iv~l~~~~~~~~~ 486 (756)
.+++|.+...+|+|.||.|-.+. ...+..||||+++...+ -.+..+-|++++.++.+ |+ +|.+.++|...+.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 36789999999999999999998 44578999999975432 33456779999999942 32 7888899999999
Q ss_pred EEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC--------------
Q 004400 487 LLLIYEYLENNSLARALFE-HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-------------- 551 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-------------- 551 (756)
.|+|+|.+ |-|+.+++.+ +...++...+..++.|+++++++||+.+ ++|-||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence 99999987 5589999975 4567899999999999999999999986 999999999999931
Q ss_pred ------CCCEEEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhH
Q 004400 552 ------DLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYL 625 (756)
Q Consensus 552 ------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 625 (756)
+..+||+|||.|+...+.. ..++.|..|.|||++.+-.++..+||||+||||+|+.||...|+..+....
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 2348999999999765544 345678899999999999999999999999999999999999965553332
Q ss_pred HHHHHHHHh-----------------cCcccccc------------ccCCC----CCCCHHHHHHHHHHHHHhhcCCCCC
Q 004400 626 LDWALVLKE-----------------QGKLMELV------------DTNPG----SNFDKEQVMVMINVALLCANASPTI 672 (756)
Q Consensus 626 ~~~~~~~~~-----------------~~~~~~~~------------~~~~~----~~~~~~~~~~l~~l~~~c~~~~P~~ 672 (756)
+.....+.+ .+ ..+.. +.+.. ......+...+.+++++++..||.+
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 221111111 01 00000 00000 0112234457999999999999999
Q ss_pred CCCHHHHHH
Q 004400 673 RPSMSSVLR 681 (756)
Q Consensus 673 RPt~~ev~~ 681 (756)
|+|+.|+++
T Consensus 397 RiTl~EAL~ 405 (415)
T KOG0671|consen 397 RITLREALS 405 (415)
T ss_pred cccHHHHhc
Confidence 999999875
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=259.85 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=198.7
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC-----CeEE
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG-----NQLL 488 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 488 (756)
+.+.++.||-|+||.||.++ -++|+.||.|++... .-...+.+.+|+.+|..++|.|++..++..... .++|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 45678999999999999998 568999999988653 223457789999999999999999998887654 3567
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
.|+|.|.. +|...+- ....++...+.-+..||++||+|||+.+ |.||||||.|.|++.+...||||||+|+..+.
T Consensus 134 V~TELmQS-DLHKIIV-SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIV-SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHh-hhhheec-cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 78888754 6666553 3457888899999999999999999986 99999999999999999999999999998776
Q ss_pred cCcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc----------
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK---------- 637 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---------- 637 (756)
+.....+..+-|-.|.|||++++ +.|+.+.||||.|||+.|++..+..|...+....++..........
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 65555555556889999999998 4699999999999999999999988876665554443332222111
Q ss_pred -cccccccCCCC-CC--------CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 638 -LMELVDTNPGS-NF--------DKEQVMVMINVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 638 -~~~~~~~~~~~-~~--------~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
...++...+.. .+ +.........+...++..||++|.+..+.+..+
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 11111111100 00 112223456777788999999999999886654
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.9e-30 Score=238.95 Aligned_cols=255 Identities=18% Similarity=0.331 Sum_probs=192.4
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCC-CCceeeEeeEEEeC--CeEEEE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCCIEG--NQLLLI 490 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV 490 (756)
.++|++.+.+|+|.++.||.|. ..+...++||.++.. ..+.+.+|+.+|+.++ ||||+++++...++ ....+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4688899999999999999999 667888999999754 3367899999999997 99999999999875 457899
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccCCccccCccc
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDEEE 569 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGla~~~~~~ 569 (756)
+||+.+.+....- ..++..++..++.+++.||.|+|++| |+|||+||.|+|+|... .++|+|+|+|.+..+.
T Consensus 114 FE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred hhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 9999998776543 36788899999999999999999998 99999999999999654 4999999999887654
Q ss_pred CcceeeccccCccCCchHhhhc-CCCCcccchhhHHHHHHHHHhCCCCCC-ccc-hhhHHHHHHHHHh------------
Q 004400 570 NTHISTRVAGTIGYMAPEYAMR-GHLTEKADVYSFGIVALEIVSGRSNVT-KED-MFYLLDWALVLKE------------ 634 (756)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~-~~~-~~~~~~~~~~~~~------------ 634 (756)
... ...+.+..|--||.+.. ..|+..-|+|||||++..|+..+.||. +.+ ...++.-+.....
T Consensus 187 ~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 187 KEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred cee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 332 11234667889999876 558889999999999999999999993 322 2223322222111
Q ss_pred --cCccccccccCCCCCC-------CHH-HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 635 --QGKLMELVDTNPGSNF-------DKE-QVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 635 --~~~~~~~~~~~~~~~~-------~~~-~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
+.+...++.......+ ... ...+.++++.+.+..|-.+|+|+.|...
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 1111111111111110 000 1135788999999999999999999754
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-30 Score=280.79 Aligned_cols=244 Identities=28% Similarity=0.383 Sum_probs=187.0
Q ss_pred CccccCcccCCCCcc-EEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGP-VYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
-|...+++|.|+-|+ ||+|... |+.||||++-.. ...-..+|+..|+.- +|||||++|+.=.+++..|++.|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 355667899999877 8999985 789999998543 234567899999888 6999999999988999999999999
Q ss_pred CCCCHHHHHHhcCCCC---CHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC---C--CCEEEccCCccccC
Q 004400 495 ENNSLARALFEHRLKL---DWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK---D--LNSKISDFGLAKLD 566 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l---~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~---~--~~~kl~DFGla~~~ 566 (756)
.. +|.+++....... .-...+.+..|++.||++||+.+ ||||||||.||||+. + .+++|+|||+++..
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 65 9999997531111 11445788899999999999975 999999999999976 3 46899999999987
Q ss_pred cccCcce--eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhC-CCCCCccchhhHHHHHHHHHhcCccccccc
Q 004400 567 EEENTHI--STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSG-RSNVTKEDMFYLLDWALVLKEQGKLMELVD 643 (756)
Q Consensus 567 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (756)
....... .....||-||+|||++....-+.++||||+||++|+.++| ..||...-. ..+.+......+..+..
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~----R~~NIl~~~~~L~~L~~ 737 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE----RQANILTGNYTLVHLEP 737 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH----hhhhhhcCccceeeecc
Confidence 6554433 3457899999999999988888899999999999999996 899843311 11111222222211111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 644 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 644 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
. .+. ...++|.+|++.+|..||++.+|+.
T Consensus 738 ---~----~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 738 ---L----PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ---C----chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 0 011 4788999999999999999999954
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=4.7e-28 Score=240.86 Aligned_cols=211 Identities=37% Similarity=0.612 Sum_probs=184.2
Q ss_pred ccCCCCccEEEeecc-CCcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHHH
Q 004400 424 IGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLAR 501 (756)
Q Consensus 424 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 501 (756)
||+|++|.||++... +++.+++|.+...... ....+.+|++.++.++|++|+++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999965 4899999999765332 34679999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-CCCEEEccCCccccCcccCcceeeccccC
Q 004400 502 ALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-DLNSKISDFGLAKLDEEENTHISTRVAGT 580 (756)
Q Consensus 502 ~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt 580 (756)
++......+++..+..++.+++++++|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ ......+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~ 156 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGT 156 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCC
Confidence 98765457899999999999999999999996 999999999999999 89999999999986554321 12234578
Q ss_pred ccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHH
Q 004400 581 IGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMI 659 (756)
Q Consensus 581 ~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 659 (756)
..|++||..... .++.+.|+|++|++++++ ..+.
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------~~~~ 191 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------PELK 191 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------HHHH
Confidence 899999999877 788999999999999998 2388
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHh
Q 004400 660 NVALLCANASPTIRPSMSSVLRML 683 (756)
Q Consensus 660 ~l~~~c~~~~P~~RPt~~ev~~~L 683 (756)
+++..|++.+|++||++.++++.+
T Consensus 192 ~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 192 DLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHhhCCcccCcCHHHHhhCC
Confidence 999999999999999999998653
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=8.3e-30 Score=270.34 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=201.7
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
..++|+....+|.|.||.||||+ ...++..|+|.++...........+|+-+++..+|||||.++|.+...+..|++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 34688899999999999999999 56899999999987766677778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
||.+|+|.+.-+..+ .+++.++..+++...+|++|||+.| -+|||||-.||++++.|.+|++|||.+..+.... .
T Consensus 93 ycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati-~ 167 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATI-A 167 (829)
T ss_pred ecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhh-h
Confidence 999999998765443 7899999999999999999999997 7999999999999999999999999987544322 2
Q ss_pred eeeccccCccCCchHhhh---cCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCC
Q 004400 573 ISTRVAGTIGYMAPEYAM---RGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSN 649 (756)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (756)
....+.||+.|||||+.. .+.|..++|||+.|+...|+-.-+.|...--... .....-+..-+-...-|+.
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr--~l~LmTkS~~qpp~lkDk~---- 241 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR--ALFLMTKSGFQPPTLKDKT---- 241 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH--HHHHhhccCCCCCcccCCc----
Confidence 234578999999999874 5679999999999999999887766653221111 1000111111111122221
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004400 650 FDKEQVMVMINVALLCANASPTIRPSMSSVL 680 (756)
Q Consensus 650 ~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~ 680 (756)
.....+-++++.|+..+|++||+++.++
T Consensus 242 ---kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 242 ---KWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred ---cchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 1233488999999999999999998763
No 398
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-30 Score=270.41 Aligned_cols=309 Identities=18% Similarity=0.193 Sum_probs=244.1
Q ss_pred eccceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcCCCc
Q 004400 13 WKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANISTLV 91 (756)
Q Consensus 13 ~~~~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~~L~ 91 (756)
.+-+..++.|||+.|.|+.+....|..-.+|+.|+|++|.|+..--..|.++..| .|-|++|+++..-+..|.+|++|+
T Consensus 145 L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~ 224 (873)
T KOG4194|consen 145 LSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLE 224 (873)
T ss_pred HHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhh
Confidence 3444566777777777776666667666677777777777776666677777655 567777777766666777777777
Q ss_pred EEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCc
Q 004400 92 NLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSG 171 (756)
Q Consensus 92 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 171 (756)
.|+|..|+|.-.---.|..|++|+.|.|..|.++..-.+.|..|.++++|+|+.|+++..-.+++-+++.|+.|+|++|.
T Consensus 225 ~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~Na 304 (873)
T KOG4194|consen 225 SLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNA 304 (873)
T ss_pred hhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhh
Confidence 77777777772224467777777777777777776666778888889999999999887777888889999999999999
Q ss_pred CcCCCCccccCCCCCCeEEccCCCCCCCCcccccccc-ccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCCCCc-
Q 004400 172 LAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMK-MTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPS- 249 (756)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~- 249 (756)
|....++++..+++|++|+|+.|.++......|..++ |+.|.|+.|.+...-...|..+.+|+.|||++|.|+..+-+
T Consensus 305 I~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDa 384 (873)
T KOG4194|consen 305 IQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDA 384 (873)
T ss_pred hheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecc
Confidence 9888888899999999999999999999888888774 89999999999877778899999999999999999876553
Q ss_pred --cCcCCCCCCeEEecCccccccCCch-h--hcCCCeeEeecCCCCCCCCcccccccCcccccccccccccCCcccccc
Q 004400 250 --NFDDLYDVDYIYFAGNLLTGAIPPW-M--LERGDKIDLSYNNFTDGSAESSCQKRSVTGIVSCLRSVQCPKTYYSLH 323 (756)
Q Consensus 250 --~~~~l~~L~~L~ls~N~l~~~~p~~-~--~~~l~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 323 (756)
.|.+|++|+.|+|.+|+|. .+|.. + ++.|+.|||.+|.+....+.++-++ .+..++....++.|.+...++.
T Consensus 385 a~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~Wl~ 461 (873)
T KOG4194|consen 385 AVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKWLA 461 (873)
T ss_pred hhhhccchhhhheeecCceee-ecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHHHH
Confidence 5888999999999999998 55554 3 7889999999999999888888877 5666777777778877654443
No 399
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-28 Score=248.62 Aligned_cols=260 Identities=22% Similarity=0.334 Sum_probs=194.4
Q ss_pred hcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCC-----C---CceeeEeeEEEe--
Q 004400 415 TNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-----H---PNLVKLYGCCIE-- 483 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~-- 483 (756)
.++|...++||.|.|++||.|. ..+.+.||+|+.+.+.. -.+..+.|+.+|++++ | ..||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 4688899999999999999998 56778999999976532 3356688999999984 3 469999999975
Q ss_pred --CCeEEEEEEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC--------
Q 004400 484 --GNQLLLIYEYLENNSLARALF-EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-------- 552 (756)
Q Consensus 484 --~~~~~lV~e~~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~-------- 552 (756)
+..+|||+|++.. +|..+|. ...+.++...+.+|++||+.||.|||.+| +|||-||||+|||+..+
T Consensus 156 pNG~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~ 232 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDA 232 (590)
T ss_pred CCCcEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhh
Confidence 5689999999954 7777776 45567999999999999999999999998 89999999999999300
Q ss_pred --------------------------------------------------------------------------------
Q 004400 553 -------------------------------------------------------------------------------- 552 (756)
Q Consensus 553 -------------------------------------------------------------------------------- 552 (756)
T Consensus 233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~ 312 (590)
T KOG1290|consen 233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN 312 (590)
T ss_pred hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence
Q ss_pred ------------------------------------------------------------------------------CC
Q 004400 553 ------------------------------------------------------------------------------LN 554 (756)
Q Consensus 553 ------------------------------------------------------------------------------~~ 554 (756)
-+
T Consensus 313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~ 392 (590)
T KOG1290|consen 313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR 392 (590)
T ss_pred ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence 01
Q ss_pred EEEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchh------hHHH-
Q 004400 555 SKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMF------YLLD- 627 (756)
Q Consensus 555 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~------~~~~- 627 (756)
+||+|||-|.+....- +.-.-|..|.|||++.+..|++.+||||++|++|||+||...|.+.... +...
T Consensus 393 vKIaDlGNACW~~khF----T~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~ 468 (590)
T KOG1290|consen 393 VKIADLGNACWVHKHF----TEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL 468 (590)
T ss_pred EEEeeccchhhhhhhh----chhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence 4555555555433221 1234577899999999999999999999999999999999888432211 1111
Q ss_pred ------------------HHHHHHhcCccccccccCCC---------CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004400 628 ------------------WALVLKEQGKLMELVDTNPG---------SNFDKEQVMVMINVALLCANASPTIRPSMSSVL 680 (756)
Q Consensus 628 ------------------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~ 680 (756)
+...+.+.+++..+-.-.+. -.++.++...+.+++.-|++.+|++|||+.+.+
T Consensus 469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl 548 (590)
T KOG1290|consen 469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL 548 (590)
T ss_pred HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence 11111112222222111111 135778888999999999999999999999988
Q ss_pred HH
Q 004400 681 RM 682 (756)
Q Consensus 681 ~~ 682 (756)
+.
T Consensus 549 ~h 550 (590)
T KOG1290|consen 549 KH 550 (590)
T ss_pred cC
Confidence 65
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-29 Score=260.33 Aligned_cols=196 Identities=24% Similarity=0.370 Sum_probs=167.1
Q ss_pred cCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCc----c----cHHHHHHHHHHHHhCC---CCceeeEeeEEEe
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSK----Q----GNREFINEIGMISALQ---HPNLVKLYGCCIE 483 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~----~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 483 (756)
.+|...+.+|+|+||.|+.|.++ +...|+||.+.+..- + ..-.+-.|++||+.++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46889999999999999999965 567889998865311 0 1112345999999997 9999999999999
Q ss_pred CCeEEEEEEecC-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCc
Q 004400 484 GNQLLLIYEYLE-NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGL 562 (756)
Q Consensus 484 ~~~~~lV~e~~~-~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGl 562 (756)
++++|++||--. +-+|.+++. .+..+++.++..|+.||+-|+++||+.| |||||||-+||.++.+|-+||+|||.
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE-~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE-FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh-ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccc
Confidence 999999999864 558888884 4458999999999999999999999997 99999999999999999999999999
Q ss_pred cccCcccCcceeeccccCccCCchHhhhcCCC-CcccchhhHHHHHHHHHhCCCCCC
Q 004400 563 AKLDEEENTHISTRVAGTIGYMAPEYAMRGHL-TEKADVYSFGIVALEIVSGRSNVT 618 (756)
Q Consensus 563 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~ 618 (756)
|.+..... ...++||.+|.|||++.+..| +..-|||++|+++|-++....||+
T Consensus 717 aa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 98755433 345789999999999998776 566899999999999998888875
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=2e-27 Score=239.61 Aligned_cols=199 Identities=34% Similarity=0.527 Sum_probs=173.5
Q ss_pred ccccCcccCCCCccEEEeeccC-CcEEEEEEccccCcc-cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecC
Q 004400 418 FATDNNIGEGGFGPVYKGLLAD-GTAIAVKQLSSKSKQ-GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566889999999999999654 899999999865444 56788999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+++|.+++......+++..+..++.+++.++.+||+.+ ++|+||+|+||+++.++.++|+|||.+............
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 99999999765433899999999999999999999986 999999999999999999999999999876544311223
Q ss_pred ccccCccCCchHhh-hcCCCCcccchhhHHHHHHHHHhCCCCCCc
Q 004400 576 RVAGTIGYMAPEYA-MRGHLTEKADVYSFGIVALEIVSGRSNVTK 619 (756)
Q Consensus 576 ~~~gt~~y~aPE~~-~~~~~~~~~Dv~slGv~l~elltg~~p~~~ 619 (756)
...++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 35678899999998 666788899999999999999999999955
No 402
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=2e-28 Score=239.83 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=194.7
Q ss_pred cCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeC------Ce
Q 004400 416 NNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEG------NQ 486 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 486 (756)
.+|...+.+|.|+. .|-.|. .-.++.||+|++... .....++..+|...+..++|+||++++.+|.-. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35666778888888 555555 346889999988654 223346778899999999999999999998743 46
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccC
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLD 566 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~ 566 (756)
.|+|||||.. +|...+. ..++-.+...+..|++.|++|||+.| |+||||||+||++..++.+||.|||+|+..
T Consensus 96 ~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhccc
Confidence 8999999965 8888876 35788899999999999999999997 999999999999999999999999999864
Q ss_pred cccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCc---------
Q 004400 567 EEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGK--------- 637 (756)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------- 637 (756)
... ...+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+.+..+ .|.+....-+.
T Consensus 169 ~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~id--Q~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 169 DTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHID--QWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred Ccc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHH--HHHHHHHHhcCCCHHHHHHh
Confidence 443 33455678889999999999889999999999999999999999997665433 22222211100
Q ss_pred ------------------cccc-cccCCC--CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 638 ------------------LMEL-VDTNPG--SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 638 ------------------~~~~-~~~~~~--~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
..+. .|.... ...++.......+++.+|+..+|++|-+.+++++.
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0000 000000 01111233357889999999999999999999875
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.7e-28 Score=230.27 Aligned_cols=255 Identities=18% Similarity=0.298 Sum_probs=189.7
Q ss_pred hhcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeE-EEeCCeEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGC-CIEGNQLLLI 490 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lV 490 (756)
..+.|++.+.+|+|.||.+-.++++ +.+.+++|.+... ....++|.+|..---.| .|.||+.-|+. |+..+..+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3467899999999999999999964 5778999998654 33457899998764445 58999988765 7788899999
Q ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEe-c-CCCCEEEccCCccccCcc
Q 004400 491 YEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLL-D-KDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 491 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill-~-~~~~~kl~DFGla~~~~~ 568 (756)
+||++.|+|.+.+.. ..+.+....+++.|++.|+.|||++ ++||||||.+|||+ + +..++|+||||+.+..+.
T Consensus 101 qE~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred eccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999988754 3578889999999999999999998 49999999999999 3 345799999999875432
Q ss_pred cCcceeeccccCccCCchHhhhcC-----CCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccc
Q 004400 569 ENTHISTRVAGTIGYMAPEYAMRG-----HLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 643 (756)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (756)
.- ...--+..|.+||..... ...+.+|||.||+++|.++||+.||......+..-|.......+..+..++
T Consensus 176 tV----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~ 251 (378)
T KOG1345|consen 176 TV----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK 251 (378)
T ss_pred ee----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch
Confidence 11 112235569999988642 357789999999999999999999964433332223333333333332222
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 644 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 644 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
. -..+.+ .++++.++-+..+|++|-...++-++..
T Consensus 252 ~--F~~fs~----~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 252 K--FNPFSE----KALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred h--hcccCH----HHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 1 112333 3677788899999999966666655543
No 404
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-29 Score=262.03 Aligned_cols=294 Identities=20% Similarity=0.206 Sum_probs=180.6
Q ss_pred eeccceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcCCC
Q 004400 12 FWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTL 90 (756)
Q Consensus 12 ~~~~~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L 90 (756)
+|.++..+|++.|.+|-++ .+|.......+|+.|+|.+|.|+..-..++..++.|+ +||+.|.|+..--.+|..-.++
T Consensus 97 ~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni 175 (873)
T KOG4194|consen 97 FFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNI 175 (873)
T ss_pred HHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCc
Confidence 4566666777777666666 5555555555566666666666655555555555553 5566666554444455555556
Q ss_pred cEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCccc---------------------
Q 004400 91 VNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFT--------------------- 149 (756)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--------------------- 149 (756)
++|+|++|.|+..--+.|.++.+|..|.|+.|+++...+..|.+|++|+.|+|..|+|.
T Consensus 176 ~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN 255 (873)
T KOG4194|consen 176 KKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRN 255 (873)
T ss_pred eEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhc
Confidence 66666666665555555555556666666666665444445555566666665555555
Q ss_pred ---ccCChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccc-cccEEEcccccccCCCCc
Q 004400 150 ---GQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGELPR 225 (756)
Q Consensus 150 ---~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~L~~n~l~~~~p~ 225 (756)
..--+.|..|.+++.|+|..|+++..-..++++++.|+.|++|+|.|..+....+... +|++|+|++|+|+...+.
T Consensus 256 ~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~ 335 (873)
T KOG4194|consen 256 DISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEG 335 (873)
T ss_pred CcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChh
Confidence 3333444555555555555555554455566666666666666666666666665554 477777777777766666
Q ss_pred cccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCccccccCCchh-----hcCCCeeEeecCCCCCCCCcccccc
Q 004400 226 YLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM-----LERGDKIDLSYNNFTDGSAESSCQK 300 (756)
Q Consensus 226 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-----~~~l~~l~ls~N~l~~~~~~~~~~~ 300 (756)
.|..|..|+.|+|++|++...-...|..+.+|+.|||++|.|+..+-+.. ++.|+.|++.||++...+..+.-..
T Consensus 336 sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl 415 (873)
T KOG4194|consen 336 SFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGL 415 (873)
T ss_pred HHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccC
Confidence 67777777777777777765555667777777777777777765554432 6677777777777776665555554
Q ss_pred cCcccc
Q 004400 301 RSVTGI 306 (756)
Q Consensus 301 ~~~~~~ 306 (756)
.++..+
T Consensus 416 ~~LE~L 421 (873)
T KOG4194|consen 416 EALEHL 421 (873)
T ss_pred ccccee
Confidence 444433
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=5.1e-27 Score=238.76 Aligned_cols=200 Identities=30% Similarity=0.478 Sum_probs=167.7
Q ss_pred hHHHhhcCccccCcccCCCCccEEEeecc----CCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEEEeC
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGLLA----DGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCCIEG 484 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 484 (756)
.+....+.|...++||+|.|++||+|+.. ..+.||+|.+...+.. .++.+|+++|..+ .+.||+++.+++...
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34455678899999999999999999843 4678999998765443 5688999999999 599999999999999
Q ss_pred CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC-CCEEEccCCcc
Q 004400 485 NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFGLA 563 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~-~~~kl~DFGla 563 (756)
+...+|+||++.....++.. .++...+..+++.+..||+++|..| ||||||||+|+|.+.. ++-.|.|||+|
T Consensus 108 d~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred CeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhH
Confidence 99999999999998888774 4678999999999999999999998 9999999999999854 56789999999
Q ss_pred ccCcccC------c-------------------------------------ceeeccccCccCCchHhhhc-CCCCcccc
Q 004400 564 KLDEEEN------T-------------------------------------HISTRVAGTIGYMAPEYAMR-GHLTEKAD 599 (756)
Q Consensus 564 ~~~~~~~------~-------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 599 (756)
...+... . ......+||+||.|||++.+ ...++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 7211000 0 00112469999999999986 56889999
Q ss_pred hhhHHHHHHHHHhCCCCCC
Q 004400 600 VYSFGIVALEIVSGRSNVT 618 (756)
Q Consensus 600 v~slGv~l~elltg~~p~~ 618 (756)
|||.|||++.+++++.||.
T Consensus 261 iws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred eeeccceeehhhccccccc
Confidence 9999999999999999993
No 406
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=3.4e-27 Score=243.52 Aligned_cols=261 Identities=21% Similarity=0.278 Sum_probs=199.9
Q ss_pred HhhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCC------CceeeEeeEEEeCC
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQH------PNLVKLYGCCIEGN 485 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~~ 485 (756)
.....|...-..|+|-|++|.+|. ...|..||||++.... ...+.=..|+++|++|+. -|+++++..|...+
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 345688888999999999999999 4568899999997642 233445779999999963 48999999999999
Q ss_pred eEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccCCc
Q 004400 486 QLLLIYEYLENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGL 562 (756)
Q Consensus 486 ~~~lV~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGl 562 (756)
.+|||+|.+.- +|.++|...+ ..|....+..++.|+.-||..|-..| |+|.||||+|||+++.- .+||||||.
T Consensus 508 HLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 508 HLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred eeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcc
Confidence 99999998855 8999997543 45778899999999999999999886 99999999999999764 479999999
Q ss_pred cccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh--------
Q 004400 563 AKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE-------- 634 (756)
Q Consensus 563 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~-------- 634 (756)
|....+... +...-+..|.|||++.+-.|+...|+||.||.|||+.||+.-|.+.....++.....++.
T Consensus 584 A~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlR 660 (752)
T KOG0670|consen 584 ASFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLR 660 (752)
T ss_pred ccccccccc---cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhh
Confidence 986554322 222334569999999999999999999999999999999999976654444332222111
Q ss_pred cC-------------------------ccccccccCC-------------CCCCCHHHHHHHHHHHHHhhcCCCCCCCCH
Q 004400 635 QG-------------------------KLMELVDTNP-------------GSNFDKEQVMVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 635 ~~-------------------------~~~~~~~~~~-------------~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~ 676 (756)
.+ .+.-+..-.| ...-.+.....+.+|+..|+..||++|-|.
T Consensus 661 KgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~ 740 (752)
T KOG0670|consen 661 KGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITV 740 (752)
T ss_pred hcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCH
Confidence 00 0000111111 011123445578899999999999999999
Q ss_pred HHHHH
Q 004400 677 SSVLR 681 (756)
Q Consensus 677 ~ev~~ 681 (756)
.+.++
T Consensus 741 nqAL~ 745 (752)
T KOG0670|consen 741 NQALK 745 (752)
T ss_pred HHHhc
Confidence 99875
No 407
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.93 E-value=6.5e-28 Score=253.11 Aligned_cols=274 Identities=22% Similarity=0.292 Sum_probs=202.6
Q ss_pred eeeccceeccccccccCcccc-cCCcccCCCCCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcC
Q 004400 11 HFWKQKTVNQKRVLKEQNLTG-VLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANIS 88 (756)
Q Consensus 11 ~~~~~~~~~~~l~L~~~~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~ 88 (756)
+....+.+++.+++..|++.. -+|..|-.|..|+.||||+|+++ ..|..+..-+.+ -|+|++|+|..+.-..|.+|+
T Consensus 72 GELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLt 150 (1255)
T KOG0444|consen 72 GELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLT 150 (1255)
T ss_pred hhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhH
Confidence 456778889999999998864 56777889999999999999998 888888888765 688999998855445688999
Q ss_pred CCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecc-------------------------cCCccccCCCCCCEEEe
Q 004400 89 TLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTG-------------------------ELPKTFAKLTNMKDFRI 143 (756)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-------------------------~~p~~~~~l~~L~~L~L 143 (756)
.|-.||||+|++. .+|+.+..|.+|++|+|++|.|.- -+|.++..|.||..+||
T Consensus 151 DLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDl 229 (1255)
T KOG0444|consen 151 DLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDL 229 (1255)
T ss_pred hHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccc
Confidence 9999999999999 888889999999999999997541 24445555555666666
Q ss_pred eCCcccccCChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccC-C
Q 004400 144 SDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITG-E 222 (756)
Q Consensus 144 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~-~ 222 (756)
|.|.+. .+|+.+-++++|+.|+|++|+|+ .+.-......+|++|++|.|.++..+.......+|+.|.+.+|+|+- -
T Consensus 230 S~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeG 307 (1255)
T KOG0444|consen 230 SENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEG 307 (1255)
T ss_pred cccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccC
Confidence 666665 55666666666666666666665 34444555556666666666665555555555566666666666643 3
Q ss_pred CCccccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCC
Q 004400 223 LPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFT 290 (756)
Q Consensus 223 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~ 290 (756)
+|..++++.+|+.+..++|.+. .+|+.++.+..|+.|.|+.|+|- .+|..+ ++.+..||+..|+-.
T Consensus 308 iPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 308 IPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred CccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 5666777777777777777776 78888888888888888888887 677776 888999999888643
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1.9e-26 Score=274.50 Aligned_cols=196 Identities=17% Similarity=0.219 Sum_probs=141.6
Q ss_pred hCCC-CceeeEeeEE-------EeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEc
Q 004400 468 ALQH-PNLVKLYGCC-------IEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVH 539 (756)
Q Consensus 468 ~l~h-~niv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH 539 (756)
.++| +||++++++| .+.+.+++++||+ +++|.+++......+++.++..++.||++||+|||++| |||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---IvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG---IVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC---eee
Confidence 3455 5888888887 2335678889987 55999999765667999999999999999999999987 999
Q ss_pred CCCCCCceEecC-------------------CCCEEEccCCccccCcccCc---------------ceeeccccCccCCc
Q 004400 540 RDIKATNVLLDK-------------------DLNSKISDFGLAKLDEEENT---------------HISTRVAGTIGYMA 585 (756)
Q Consensus 540 ~Dikp~Nill~~-------------------~~~~kl~DFGla~~~~~~~~---------------~~~~~~~gt~~y~a 585 (756)
|||||+|||++. ++.+|++|||+++....... .......||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999954 44567777777764221000 00112458899999
Q ss_pred hHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHh
Q 004400 586 PEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLC 665 (756)
Q Consensus 586 PE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 665 (756)
||++.+..++.++|||||||++|||++|..|+...... ... ... . ...+.. .........++.+|
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-~~~----~~~-~----~~~~~~-----~~~~~~~~~~~~~~ 248 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-MSS----LRH-R----VLPPQI-----LLNWPKEASFCLWL 248 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-HHH----HHH-h----hcChhh-----hhcCHHHHHHHHHh
Confidence 99999999999999999999999999998876432110 000 000 0 000000 01122356788899
Q ss_pred hcCCCCCCCCHHHHHHH
Q 004400 666 ANASPTIRPSMSSVLRM 682 (756)
Q Consensus 666 ~~~~P~~RPt~~ev~~~ 682 (756)
|+.+|.+||++.|+++.
T Consensus 249 L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 249 LHPEPSCRPSMSELLQS 265 (793)
T ss_pred CCCChhhCcChHHHhhc
Confidence 99999999999999764
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=7.5e-25 Score=212.22 Aligned_cols=166 Identities=24% Similarity=0.213 Sum_probs=126.4
Q ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeec
Q 004400 497 NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTR 576 (756)
Q Consensus 497 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 576 (756)
|+|.+++...+..+++.++..++.|++.||+|||+++ ||+||+++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc------
Confidence 7899999876667999999999999999999999874 999999999999999 99998654322
Q ss_pred cccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHH
Q 004400 577 VAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVM 656 (756)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (756)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......... ...... .........
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~-~~~~~~---~~~~~~~~~ 137 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA--ILEILLNGMP-ADDPRD---RSNLESVSA 137 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH--HHHHHHHHhc-cCCccc---cccHHHHHh
Confidence 2589999999999999999999999999999999999999955432111 1111111000 000000 001112222
Q ss_pred --HHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 657 --VMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 657 --~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
.+.+++.+||+.+|.+||++.|+++.+..
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 58999999999999999999999988763
No 410
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.92 E-value=2.2e-27 Score=249.20 Aligned_cols=269 Identities=24% Similarity=0.341 Sum_probs=124.2
Q ss_pred ceeccccccccCcccccCCcccCCCCCCCEEEccCCcccC-ccCcccccCCcce-eeccCccccccCCccCcCcCCCcEE
Q 004400 16 KTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSG-TIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTLVNL 93 (756)
Q Consensus 16 ~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L~~L 93 (756)
+..+..|.+.+|++. .+..+++.++.|+.+++.+|++.. -+|..+..+.-|. ++|++|++. ..|..+...+++..|
T Consensus 54 lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVL 131 (1255)
T KOG0444|consen 54 LQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVL 131 (1255)
T ss_pred HhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEE
Confidence 334444444444444 233344444444444444444431 2444444444442 455555544 455555555555555
Q ss_pred EeecCcccccCC-cccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCccccc---------------------
Q 004400 94 TVQYNQFSGELP-EELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQ--------------------- 151 (756)
Q Consensus 94 ~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------------------- 151 (756)
+||+|+|. .|| .-|-+|+.|-.||||+|+|. .+|..+..|.+|++|.|++|.+...
T Consensus 132 NLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqR 209 (1255)
T KOG0444|consen 132 NLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQR 209 (1255)
T ss_pred EcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccc
Confidence 55555555 333 23445555555555555555 4444455555555555555544321
Q ss_pred ----CChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccc
Q 004400 152 ----IPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYL 227 (756)
Q Consensus 152 ----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~ 227 (756)
+|..+..+.+|..++|+.|.+. .+|..+.++++|+.|+||+|.+++.....-.-.+|+.|+|+.|+|+ .+|+++
T Consensus 210 Tl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~av 287 (1255)
T KOG0444|consen 210 TLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAV 287 (1255)
T ss_pred hhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHH
Confidence 2233333334444444444443 3444444444444444444444443322211123444444444444 444444
Q ss_pred cCCCCCcEEEccCCcCC-CCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCCC
Q 004400 228 GKMTKLKVLDLSFNRLR-GQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTD 291 (756)
Q Consensus 228 ~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~~ 291 (756)
.++++|+.|.+.+|+++ .-+|+.++++.+|+.+..++|.|. .+|..+ ...|+.|.++.|.+..
T Consensus 288 cKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiT 353 (1255)
T KOG0444|consen 288 CKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLIT 353 (1255)
T ss_pred hhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceee
Confidence 44444444444444443 124444444444444444444444 444444 3344555555555443
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-23 Score=222.70 Aligned_cols=259 Identities=19% Similarity=0.184 Sum_probs=194.7
Q ss_pred CccccCcccCCCCccEEEeeccCC--cEEEEEEccccCcccHHHHHHHHHHHHhCCC----CceeeEeeEE-EeCCeEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLLADG--TAIAVKQLSSKSKQGNREFINEIGMISALQH----PNLVKLYGCC-IEGNQLLL 489 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 489 (756)
+|...+.||+|+||.||.|..... ..+|+|............+..|+.++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 789999999999999999995543 5788888765433333367889999988873 6899999999 57888999
Q ss_pred EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC-----CCEEEccCCcc
Q 004400 490 IYEYLENNSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-----LNSKISDFGLA 563 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~-----~~~kl~DFGla 563 (756)
||+.+ |.+|.++..... ..++..+..+|+.|++.+|++||+.| ++||||||.|+++... ..+.|.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99977 679999875444 78999999999999999999999997 9999999999999865 35899999999
Q ss_pred ccCc--ccCc----ce---eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHh
Q 004400 564 KLDE--EENT----HI---STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKE 634 (756)
Q Consensus 564 ~~~~--~~~~----~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 634 (756)
+... .... .. ...+.||..|+++....+.+.+.+.|+||++.++.|+..|..||.................
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8322 1111 11 2346699999999999999999999999999999999999999955432211111111111
Q ss_pred cCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 635 QGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
...... .....+ ..+.++...+-..+..++|....+...+++...
T Consensus 255 ~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 255 KLLTDR------FGDLKP---EEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred hhcccc------ccCCCh---HHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 111111 111122 235566666667899999999999998876544
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=3.1e-24 Score=226.91 Aligned_cols=167 Identities=22% Similarity=0.209 Sum_probs=130.6
Q ss_pred HHHhhcCccccCcccCCCCccEEEeecc--CCcEEEEEEcccc-----CcccHHHHHHHHHHHHhCCCCceeeEeeEEEe
Q 004400 411 IKAATNNFATDNNIGEGGFGPVYKGLLA--DGTAIAVKQLSSK-----SKQGNREFINEIGMISALQHPNLVKLYGCCIE 483 (756)
Q Consensus 411 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 483 (756)
.....++|...+.||+|+||+||+|... +++.||||++... .....+.|.+|+++|++++|+|+++.+..
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--- 89 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--- 89 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---
Confidence 3445678999999999999999999854 5778899986532 12234568999999999999999853322
Q ss_pred CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCC-CCCceEecCCCCEEEccCCc
Q 004400 484 GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDI-KATNVLLDKDLNSKISDFGL 562 (756)
Q Consensus 484 ~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Di-kp~Nill~~~~~~kl~DFGl 562 (756)
.+..++||||++|++|... . . .. ...++.++++||+|||+.| |+|||| ||+|||++.++.+||+|||+
T Consensus 90 ~~~~~LVmE~~~G~~L~~~-~-~---~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHLA-R-P---HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred cCCcEEEEEccCCCCHHHh-C-c---cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 2467999999999999632 1 1 11 2467889999999999987 999999 99999999999999999999
Q ss_pred cccCcccCcce-------eeccccCccCCchHhhhc
Q 004400 563 AKLDEEENTHI-------STRVAGTIGYMAPEYAMR 591 (756)
Q Consensus 563 a~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~ 591 (756)
|+......... .+...+++.|+|||++..
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 98665433211 135678999999999864
No 413
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-24 Score=206.99 Aligned_cols=246 Identities=24% Similarity=0.370 Sum_probs=187.1
Q ss_pred cccCcccCCCCccEEEeeccCCcEEEEEEcccc--CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCC
Q 004400 419 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK--SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLEN 496 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 496 (756)
....+|.+...|..|+|+|+.+ .+++|++... .....++|..|.-.|+-+.||||.+++|.|..+....++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 3445788999999999999744 4556666543 333446899999999999999999999999999999999999999
Q ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEc--cCCccccCcccCcce
Q 004400 497 NSLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKIS--DFGLAKLDEEENTHI 573 (756)
Q Consensus 497 gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~--DFGla~~~~~~~~~~ 573 (756)
|+|...+++. ....+..++.+++.++|+|++|||+.. +-|.---+.+..+++|++.+++|+ |--++. ..
T Consensus 272 gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf--qe----- 343 (448)
T KOG0195|consen 272 GSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF--QE----- 343 (448)
T ss_pred hHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee--ec-----
Confidence 9999999854 445788899999999999999999985 334445688999999999888764 322221 11
Q ss_pred eeccccCccCCchHhhhcCCC---CcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCC
Q 004400 574 STRVAGTIGYMAPEYAMRGHL---TEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNF 650 (756)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (756)
....-.+.||+||.+++.+- -.++|+|||++++||+.|...||..-.....- +.+.-..+....
T Consensus 344 -~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------------mkialeglrv~i 410 (448)
T KOG0195|consen 344 -VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------------MKIALEGLRVHI 410 (448)
T ss_pred -cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------------hhhhhccccccC
Confidence 11234678999999987653 35799999999999999999999544332211 011111222334
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 651 DKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 651 ~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
++.....+.+++.-|+..||.+||.++.|+-.||+.
T Consensus 411 ppgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 411 PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 445556688999999999999999999999998864
No 414
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.90 E-value=4.9e-26 Score=228.53 Aligned_cols=271 Identities=27% Similarity=0.375 Sum_probs=199.1
Q ss_pred eeeeccceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcC
Q 004400 10 FHFWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANIS 88 (756)
Q Consensus 10 ~~~~~~~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~ 88 (756)
++.+..+.++.++++.+|+++...|+.+. |+.|+.||+.+|.++ .+|..++.+..|. +++.+|.+. .+| .|.+++
T Consensus 153 p~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs 228 (565)
T KOG0472|consen 153 PEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCS 228 (565)
T ss_pred chHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccH
Confidence 35567778888899999999966666555 999999999999987 8888999998885 788888887 777 799999
Q ss_pred CCcEEEeecCcccccCCcccC-CCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEc
Q 004400 89 TLVNLTVQYNQFSGELPEELG-SLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFI 167 (756)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 167 (756)
.|++|+++.|+|+ .+|.+.+ +|.+|..|||.+|+++ ..|+.+.-+.+|..||+|+|.|+ .+|..++++ .|+.|.+
T Consensus 229 ~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~l 304 (565)
T KOG0472|consen 229 LLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLAL 304 (565)
T ss_pred HHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhh
Confidence 9999999999998 8888777 8999999999999999 89999999999999999999999 678889999 8999999
Q ss_pred cCCcCcC-------------------------------------CCCcc----ccCCCCCCeEEccC-------------
Q 004400 168 QPSGLAG-------------------------------------PIPSG----IFSLENLTDLRISD------------- 193 (756)
Q Consensus 168 ~~N~l~~-------------------------------------~~p~~----~~~l~~L~~L~l~~------------- 193 (756)
.+|.+.. ..|.. ...+.+.+.|++++
T Consensus 305 eGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea 384 (565)
T KOG0472|consen 305 EGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEA 384 (565)
T ss_pred cCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHH
Confidence 9998751 00100 01122333333333
Q ss_pred -------------CCCCCCC-----------------------cccccc-ccccEEEcccccccCCCCccccCCCCCcEE
Q 004400 194 -------------LNGPEAT-----------------------FPQLGN-MKMTKLILRNCNITGELPRYLGKMTKLKVL 236 (756)
Q Consensus 194 -------------n~~~~~~-----------------------~~~~~~-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 236 (756)
|.+.+.+ +..+.. .+|+-|+|++|-+. .+|..++.+..|+.|
T Consensus 385 ~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~L 463 (565)
T KOG0472|consen 385 AKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTL 463 (565)
T ss_pred hhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhhee
Confidence 2222211 111111 14667788887777 677777778778888
Q ss_pred EccCCcCCC-----------------------CCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCC
Q 004400 237 DLSFNRLRG-----------------------QIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFT 290 (756)
Q Consensus 237 ~Ls~N~l~~-----------------------~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~ 290 (756)
|+|+|+|.. ..|+.+.+|.+|..|||.+|.+. .+|+.+ +.+++.|++.||+|.
T Consensus 464 nlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 464 NLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 888887761 22233666777777777777776 556555 667777777777776
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=8.4e-23 Score=192.37 Aligned_cols=265 Identities=21% Similarity=0.250 Sum_probs=202.0
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCC-CceeeEeeEEEeCCeEEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQH-PNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~ 491 (756)
..++|...+.||.|+||.+|.|. ..+|..||||.-+.+... ..+..|..+.+.+++ ..|..+..+..+..+-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34688999999999999999999 788999999997654333 567789999999975 67888888888999999999
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC---CCEEEccCCccccCcc
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD---LNSKISDFGLAKLDEE 568 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~---~~~kl~DFGla~~~~~ 568 (756)
|.+ |.+|++...-+...++..+..-++-|++.-++|+|.++ +|||||||+|+|..-+ ..+.++|||+|+.+.+
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 987 77999999877778999999999999999999999997 9999999999999654 3489999999986543
Q ss_pred cCc--c----eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcccccc
Q 004400 569 ENT--H----ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELV 642 (756)
Q Consensus 569 ~~~--~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (756)
..+ + ......||.+|.+-....+.+.+.+.|+-|+|.++.++.-|..||.+-....-......+.+. +. ...
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~Ek-K~-s~~ 244 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEK-KM-STP 244 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHh-hc-CCC
Confidence 222 1 133467999999998888888899999999999999999999999654332221111111111 11 111
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcccc
Q 004400 643 DTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVDVL 690 (756)
Q Consensus 643 ~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 690 (756)
-..+=..+|.+ +.-.+..|-...-++-|...-+-+.+.-....+
T Consensus 245 ie~LC~G~P~E----F~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 245 IEVLCKGFPAE----FAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred HHHHhCCCcHH----HHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 01111223333 566677899999999999887777766544433
No 416
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2e-22 Score=198.28 Aligned_cols=257 Identities=19% Similarity=0.235 Sum_probs=198.2
Q ss_pred CccccCcccCCCCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEEec
Q 004400 417 NFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.|.+.++||+|.||..+.|. +-++..||||.-..++ ...++..|....+.|. .++|..+|.+..++.+-.||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 67889999999999999999 6789999999876543 3367788998888884 699999999989999999999987
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-----CEEEccCCccccCccc
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-----NSKISDFGLAKLDEEE 569 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-----~~kl~DFGla~~~~~~ 569 (756)
|.||+|+..-++.+++..+..-+|.|++.-++|+|++. +|.|||||+|+||...+ .+.|+|||+|+.+.+.
T Consensus 107 -GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 107 -GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred -CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 77999999888899999999999999999999999985 99999999999997543 3899999999976654
Q ss_pred Ccce------eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccc
Q 004400 570 NTHI------STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVD 643 (756)
Q Consensus 570 ~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (756)
.+.. .....||.+||+-....+++.+.+.|.-|+|-++.+++-|..||.+-.-...-.....+.+.+....+-+
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~ 262 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEV 262 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHH
Confidence 4332 2346799999999999999999999999999999999999999965432222111111222222111111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 644 TNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 644 ~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
-+. .++ .++...+...-..+..+-|..+-+...+..
T Consensus 263 Lc~--g~P----~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 263 LCE--GFP----EEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred HHh--cCH----HHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 111 122 235555555667788888988777665543
No 417
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.88 E-value=1.1e-25 Score=226.15 Aligned_cols=274 Identities=23% Similarity=0.320 Sum_probs=236.6
Q ss_pred ceeeeeccceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcC
Q 004400 8 LVFHFWKQKTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLAN 86 (756)
Q Consensus 8 ~~~~~~~~~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~ 86 (756)
-+.+.|-....++++.|++|++.-. -+.+.++.-|++|++++|++. ..|++++.+..+ +++.++|+++ .+|..++.
T Consensus 36 ~e~e~wW~qv~l~~lils~N~l~~l-~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s 112 (565)
T KOG0472|consen 36 GEGENWWEQVDLQKLILSHNDLEVL-REDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGS 112 (565)
T ss_pred cchhhhhhhcchhhhhhccCchhhc-cHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhh
Confidence 3445577788999999999999954 455889999999999999998 788888888766 6899999988 88999999
Q ss_pred cCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEE
Q 004400 87 ISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLF 166 (756)
Q Consensus 87 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 166 (756)
+.+|+.|+.++|.+. .+|++++.+..|+.|+..+|+++ ..|..+..+.+|..|++.+|+++...|+.+ +++.|+.|+
T Consensus 113 ~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld 189 (565)
T KOG0472|consen 113 LISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLD 189 (565)
T ss_pred hhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcc
Confidence 999999999999999 88999999999999999999999 888899999999999999999995555544 499999999
Q ss_pred ccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCcccc-CCCCCcEEEccCCcCCC
Q 004400 167 IQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLG-KMTKLKVLDLSFNRLRG 245 (756)
Q Consensus 167 l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 245 (756)
+..|.+. .+|..++.+.+|..|++..|.+...+ ..-+...|..|++..|.+. .+|.+.. .+++|..|||..|++.
T Consensus 190 ~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk- 265 (565)
T KOG0472|consen 190 CNSNLLE-TLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK- 265 (565)
T ss_pred cchhhhh-cCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-
Confidence 9999998 79999999999999999999998776 3333345899999999999 5666554 8999999999999999
Q ss_pred CCCccCcCCCCCCeEEecCccccccCCchh-hcCCCeeEeecCCCCCC
Q 004400 246 QIPSNFDDLYDVDYIYFAGNLLTGAIPPWM-LERGDKIDLSYNNFTDG 292 (756)
Q Consensus 246 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~~l~~l~ls~N~l~~~ 292 (756)
..|..+.-+.+|++||+|+|.++ .+|..+ --.++.|.+.||++...
T Consensus 266 e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnlhL~~L~leGNPlrTi 312 (565)
T KOG0472|consen 266 EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNLHLKFLALEGNPLRTI 312 (565)
T ss_pred cCchHHHHhhhhhhhcccCCccc-cCCcccccceeeehhhcCCchHHH
Confidence 89999999999999999999999 455554 22788888999997653
No 418
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=3.3e-21 Score=205.81 Aligned_cols=255 Identities=30% Similarity=0.422 Sum_probs=197.6
Q ss_pred ccccCcccCCCCccEEEeeccCCcEEEEEEccccCcc---cHHHHHHHHHHHHhCCCC-ceeeEeeEEEeCCeEEEEEEe
Q 004400 418 FATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQ---GNREFINEIGMISALQHP-NLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lV~e~ 493 (756)
|...+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++++++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999976 78999998765332 367899999999999988 799999999888888999999
Q ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC-CEEEccCCccccCcccC
Q 004400 494 LENNSLARALFEHR--LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDEEEN 570 (756)
Q Consensus 494 ~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGla~~~~~~~ 570 (756)
+.++++.+++.... ..+.......++.|++.+++|+|+.+ ++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997765443 26899999999999999999999997 99999999999999988 69999999998555433
Q ss_pred cc-----eeeccccCccCCchHhhhc---CCCCcccchhhHHHHHHHHHhCCCCCCccch----hhHHHHHHHHHhcCcc
Q 004400 571 TH-----ISTRVAGTIGYMAPEYAMR---GHLTEKADVYSFGIVALEIVSGRSNVTKEDM----FYLLDWALVLKEQGKL 638 (756)
Q Consensus 571 ~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~ 638 (756)
.. ......||..|+|||.+.. ..++...|+||+|++++++++|..||..... ........ .....
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~- 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL--ELPTP- 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH--hcCCc-
Confidence 22 2355789999999999987 5788999999999999999999999755442 11111111 11110
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 639 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.................+.+++..|+..+|..|.+..+....
T Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 --SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred --ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001122457888999999999999999987654
No 419
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.2e-22 Score=229.14 Aligned_cols=254 Identities=22% Similarity=0.240 Sum_probs=188.6
Q ss_pred cccCcccCCCCccEEEee-ccCCcEEEEEEcccc--Cccc----HHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 419 ATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK--SKQG----NREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
...+++|.|++|.|+.+. ....+.++.|.+... .... ...+..|+.+=..++|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456899999999888876 344444555544311 1111 122566888888899999999888887777776679
Q ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC-
Q 004400 492 EYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN- 570 (756)
Q Consensus 492 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~- 570 (756)
|||++ +|...+... ..+...++..++.|++.|++|+|+.| |.|||+|++|++++.+|.+||+|||.+..+....
T Consensus 401 E~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 99999 999988654 36888899999999999999999998 9999999999999999999999999998654332
Q ss_pred --cceeeccccCccCCchHhhhcCCCCc-ccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCC
Q 004400 571 --THISTRVAGTIGYMAPEYAMRGHLTE-KADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPG 647 (756)
Q Consensus 571 --~~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (756)
......++|+-.|+|||++...+|.+ ..||||.|+++..|++|+.||......+..- .........-.....
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~~~~~~~~~~~ 550 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNYSDQRNIFEGP 550 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhccccccccccCh
Confidence 24566788999999999999999877 5899999999999999999994332211000 000001111111111
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 004400 648 SNFDKEQVMVMINVALLCANASPTIRPSMSSVLRM 682 (756)
Q Consensus 648 ~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~ 682 (756)
.......+.....++.++++.+|.+|-|+.+|++.
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 12233445568889999999999999999999764
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86 E-value=9.3e-22 Score=193.23 Aligned_cols=171 Identities=17% Similarity=0.161 Sum_probs=135.0
Q ss_pred hhcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHH---------HHHHHHHHHhCCCCceeeEeeEEEeC
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNRE---------FINEIGMISALQHPNLVKLYGCCIEG 484 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~~ 484 (756)
..++|...+++|.|+||.||.+.. +++.+|+|.+.......... +.+|++.+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467999999999999999999766 57789999997543322222 67899999999999999999887643
Q ss_pred --------CeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEE
Q 004400 485 --------NQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSK 556 (756)
Q Consensus 485 --------~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~k 556 (756)
...++||||++|.+|.++. .++. ....+++.++..+|..| ++|||+||+||+++.++ ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EE
Confidence 3579999999999998873 2222 34569999999999997 99999999999999988 99
Q ss_pred EccCCccccCcccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHH
Q 004400 557 ISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIV 611 (756)
Q Consensus 557 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell 611 (756)
|+|||......+.... ..+.....+..++|+||||+.+..+.
T Consensus 175 liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999988754322111 11344556778999999999987654
No 421
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=3.3e-21 Score=187.69 Aligned_cols=140 Identities=18% Similarity=0.210 Sum_probs=109.1
Q ss_pred cCcccCCCCccEEEeeccCCcEEEEEEccccCcc--c-------HHH-----------------HHHHHHHHHhCCCCce
Q 004400 421 DNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQ--G-------NRE-----------------FINEIGMISALQHPNL 474 (756)
Q Consensus 421 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~ni 474 (756)
...||+|+||.||+|...+|+.||||+++..... . ... ..+|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999879999999998654211 1 112 2349999999988776
Q ss_pred eeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCeEcCCCCCCceEecCCC
Q 004400 475 VKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYL-HGESRIKVVHRDIKATNVLLDKDL 553 (756)
Q Consensus 475 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~g~~~iiH~Dikp~Nill~~~~ 553 (756)
.....+.. ...++||||++++++...... ...+++.+...++.|++.+|+|+ |+.| |+||||||+|||++ ++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CC
Confidence 43333222 223899999999887655433 34789999999999999999999 6776 99999999999998 47
Q ss_pred CEEEccCCccccCc
Q 004400 554 NSKISDFGLAKLDE 567 (756)
Q Consensus 554 ~~kl~DFGla~~~~ 567 (756)
.++|+|||+|....
T Consensus 155 ~v~LiDFG~a~~~~ 168 (190)
T cd05147 155 KLYIIDVSQSVEHD 168 (190)
T ss_pred cEEEEEccccccCC
Confidence 89999999997543
No 422
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=4.6e-21 Score=205.97 Aligned_cols=216 Identities=28% Similarity=0.421 Sum_probs=161.8
Q ss_pred HHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe-EcCCCCC
Q 004400 466 ISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKV-VHRDIKA 544 (756)
Q Consensus 466 l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~i-iH~Dikp 544 (756)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+......++|.....++.+|+.||+|+|... | .|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~---i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSP---IGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCc---ceeeeeecc
Confidence 35688999999999999999999999999999999999988889999999999999999999999873 4 9999999
Q ss_pred CceEecCCCCEEEccCCccccCccc-CcceeeccccCccCCchHhhhcC-------CCCcccchhhHHHHHHHHHhCCCC
Q 004400 545 TNVLLDKDLNSKISDFGLAKLDEEE-NTHISTRVAGTIGYMAPEYAMRG-------HLTEKADVYSFGIVALEIVSGRSN 616 (756)
Q Consensus 545 ~Nill~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slGv~l~elltg~~p 616 (756)
+|+++|....+||+|||+....... .........-..-|.|||.+... ..+.++||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 9999999999999999998866421 11111112234579999999763 146789999999999999999999
Q ss_pred CCccchhhHHH-HHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccCcc
Q 004400 617 VTKEDMFYLLD-WALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 617 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 688 (756)
|.........+ -+..+...+. ..+.+..... .+....+..++..||..+|.+||++.+|-..++....
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~--~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGS--NPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccccCChHHHHHHHHhcCC--CCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 95532221111 1111111011 1111111100 0223358899999999999999999999777765433
No 423
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=1.3e-21 Score=218.92 Aligned_cols=250 Identities=23% Similarity=0.259 Sum_probs=183.7
Q ss_pred CccccCcccCCCCccEEEeeccCCcEEEEEEccccC-cccHHHHHHHHHH--HHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 417 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKS-KQGNREFINEIGM--ISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
++...+.||++.|=+|.+|..+.|. |+||++-+.. .-..+.|.++++- ...++|||.+++.-.-..+...|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 6778899999999999999988887 8899886543 3344555554443 4456899999998887788888999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccc--cCcccCc
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAK--LDEEENT 571 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~--~~~~~~~ 571 (756)
... +|.|.+. .+..+..-+.+.|+.|++.||..+|..| |+|||||.+|||++.-.-+.|+||.--+ +..+++.
T Consensus 103 vkh-nLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 103 VKH-NLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred Hhh-hhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 976 8888884 4446778888999999999999999997 9999999999999999899999997765 3334433
Q ss_pred ceeeccccC----ccCCchHhhhcC-----------CCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhc
Q 004400 572 HISTRVAGT----IGYMAPEYAMRG-----------HLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQ 635 (756)
Q Consensus 572 ~~~~~~~gt----~~y~aPE~~~~~-----------~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 635 (756)
...+-+..| .+|.|||.+... ..+++-||||+||+++|+++ |++||.-. .++.+...- .
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---QL~aYr~~~--~ 252 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---QLLAYRSGN--A 252 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---HHHhHhccC--c
Confidence 332323333 379999987541 15778999999999999988 67777332 222221110 0
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhcc
Q 004400 636 GKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLEC 685 (756)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~ 685 (756)
......+.... ...+++++..|++.||++|-++++.++.-.+
T Consensus 253 ~~~e~~Le~Ie--------d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 253 DDPEQLLEKIE--------DVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred cCHHHHHHhCc--------CccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 01111111100 0138899999999999999999999887554
No 424
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=4e-20 Score=177.51 Aligned_cols=187 Identities=17% Similarity=0.096 Sum_probs=142.2
Q ss_pred cccCcccCCCCccEEEeeccCCcEEEEEEccccCccc----HHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEEe
Q 004400 419 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQG----NREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
.....|++|+||+||.+.. ++..++.+.+....... ...|.+|+++|+++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999997766 57778877776542211 125789999999995 5889999886 446999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCC-CCCceEecCCCCEEEccCCccccCcccCcc
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDI-KATNVLLDKDLNSKISDFGLAKLDEEENTH 572 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Di-kp~Nill~~~~~~kl~DFGla~~~~~~~~~ 572 (756)
+.|.+|.+.+.. ....++.|++++|+++|+.| |+|||| ||+|||++.++.++|+|||+|.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998754321 12357789999999999997 999999 799999999999999999999865543311
Q ss_pred ----e--------eeccccCccCCchHhhhcC-CCC-cccchhhHHHHHHHHHhCCCCCCccc
Q 004400 573 ----I--------STRVAGTIGYMAPEYAMRG-HLT-EKADVYSFGIVALEIVSGRSNVTKED 621 (756)
Q Consensus 573 ----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~Dv~slGv~l~elltg~~p~~~~~ 621 (756)
. ......++.|++|+...-- ..+ .+.+.++-|..+|.++|++.+..+++
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 1112368889999865431 233 56789999999999999999876543
No 425
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.7e-21 Score=208.69 Aligned_cols=225 Identities=26% Similarity=0.305 Sum_probs=181.8
Q ss_pred cccCCCCccEEEee----ccCCcEEEEEEccccCccc--HHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEEEEecC
Q 004400 423 NIGEGGFGPVYKGL----LADGTAIAVKQLSSKSKQG--NREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLIYEYLE 495 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~ 495 (756)
.+|+|+||.|+.++ ...|..+|+|.++++.... ......|..++...+ ||.+|++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999876 3357889999987753221 124566888899987 9999999999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceee
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHIST 575 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 575 (756)
+|.|...+... ..+++.....+...++-|++++|+.+ |+|||+|++||+++.+|.+++.|||+++..-.....
T Consensus 81 gg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--- 153 (612)
T ss_pred cchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc---
Confidence 99998888544 46778888888999999999999997 999999999999999999999999999865433222
Q ss_pred ccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHH
Q 004400 576 RVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQV 655 (756)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (756)
+||..|||||++. ....++|.||||++++||+||..||..+....+. .. ....+.+..
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il----------------~~--~~~~p~~l~ 211 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRIL----------------KA--ELEMPRELS 211 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHh----------------hh--ccCCchhhh
Confidence 8999999999987 5778999999999999999999999773221111 10 112345556
Q ss_pred HHHHHHHHHhhcCCCCCCCCH
Q 004400 656 MVMINVALLCANASPTIRPSM 676 (756)
Q Consensus 656 ~~l~~l~~~c~~~~P~~RPt~ 676 (756)
....+++..+...+|..|--.
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhcc
Confidence 667888888999999988755
No 426
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.83 E-value=6.8e-20 Score=179.26 Aligned_cols=141 Identities=17% Similarity=0.198 Sum_probs=110.8
Q ss_pred cCcccCCCCccEEEeeccCCcEEEEEEccccCcc---------------------c-----HHHHHHHHHHHHhCCCCce
Q 004400 421 DNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQ---------------------G-----NREFINEIGMISALQHPNL 474 (756)
Q Consensus 421 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~ni 474 (756)
...||+|+||.||+|...+|+.||||++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999998754211 0 1123578999999999987
Q ss_pred eeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEcCCCCCCceEecCCC
Q 004400 475 VKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHG-ESRIKVVHRDIKATNVLLDKDL 553 (756)
Q Consensus 475 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~g~~~iiH~Dikp~Nill~~~~ 553 (756)
.....+... ..++||||++++++...... ...++.....+++.|++.++.++|+ .| |+||||||+||+++ ++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CC
Confidence 544433332 24899999999865443222 2357888999999999999999999 76 99999999999999 78
Q ss_pred CEEEccCCccccCcc
Q 004400 554 NSKISDFGLAKLDEE 568 (756)
Q Consensus 554 ~~kl~DFGla~~~~~ 568 (756)
.++|+|||+++....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999986543
No 427
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.82 E-value=9.1e-23 Score=205.06 Aligned_cols=251 Identities=18% Similarity=0.207 Sum_probs=118.3
Q ss_pred CCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcCCCcEEEeec-CcccccCCcccCCCCCCcEEecc
Q 004400 43 LQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANISTLVNLTVQY-NQFSGELPEELGSLLNLEKLHLS 120 (756)
Q Consensus 43 L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~ 120 (756)
.+.|+|..|+|+.+.|.+|+.++.| +++|++|+|+.+-|++|.++.+|.+|-+.+ |+|+...-+.|++|..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 3445555555554444455555444 245555555555555555555444443333 45553333345555555555555
Q ss_pred CCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCc------------CCCCccccCCCCCCe
Q 004400 121 SNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA------------GPIPSGIFSLENLTD 188 (756)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~------------~~~p~~~~~l~~L~~ 188 (756)
-|++.-...+.|..|++|..|.+.+|.+...--..|..+..++.+.+..|.+. ...|..++.......
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 55555444444555555555555555554222224455555555555544421 111222222222222
Q ss_pred EEccCCCCCC--------------------------CCccccccc-cccEEEcccccccCCCCccccCCCCCcEEEccCC
Q 004400 189 LRISDLNGPE--------------------------ATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFN 241 (756)
Q Consensus 189 L~l~~n~~~~--------------------------~~~~~~~~~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 241 (756)
..+..+++.. -+...|..+ +|++|+|++|+++++-+.+|.++..|++|.|..|
T Consensus 229 ~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N 308 (498)
T KOG4237|consen 229 YRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRN 308 (498)
T ss_pred HHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcc
Confidence 2222211111 111122222 3555566666666555555666666666666666
Q ss_pred cCCCCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCCCCC
Q 004400 242 RLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGS 293 (756)
Q Consensus 242 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~~~~ 293 (756)
+|.......|.++..|+.|+|.+|+|++..|-.+ +..+..|++-.|+|.|..
T Consensus 309 ~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 309 KLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred hHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 5554444555555566666666666655555544 444555555555555543
No 428
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.82 E-value=1.8e-22 Score=203.03 Aligned_cols=279 Identities=16% Similarity=0.145 Sum_probs=219.3
Q ss_pred CEEEccCCcccCccCcccccCCcceeeccCccccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcEEeccC-C
Q 004400 44 QDIDLTLNYLSGTIPSQWASLPLLNISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSS-N 122 (756)
Q Consensus 44 ~~L~L~~n~l~~~~p~~~~~l~~L~l~l~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N 122 (756)
...+.++-+|+ .+|..+..-+ ..+.|..|.|+.+-|.+|+.+++|++|||++|+|+-+-|++|..|.+|..|-+.+ |
T Consensus 49 ~~VdCr~~GL~-eVP~~LP~~t-veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 49 GIVDCRGKGLT-EVPANLPPET-VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred ceEEccCCCcc-cCcccCCCcc-eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 35677777887 6776554322 2466778999988888999999999999999999999999999999988887776 9
Q ss_pred eecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcCCCCc-cccCCCCCCeEEccCCCCC----
Q 004400 123 NFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPS-GIFSLENLTDLRISDLNGP---- 197 (756)
Q Consensus 123 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~n~~~---- 197 (756)
+|+....+.|.+|..|+.|.+.-|++.-...++|..+++|..|.+..|.+. .+++ .|..+.+++.+.+..|.+.
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCn 205 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCN 205 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccc
Confidence 999666678999999999999999999888999999999999999999998 4555 8888999999988776521
Q ss_pred --CC------Cccccccc-----------------------cccEE--E-cccccccCCCC-ccccCCCCCcEEEccCCc
Q 004400 198 --EA------TFPQLGNM-----------------------KMTKL--I-LRNCNITGELP-RYLGKMTKLKVLDLSFNR 242 (756)
Q Consensus 198 --~~------~~~~~~~~-----------------------~L~~L--~-L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~ 242 (756)
.. .+-.++.. .++.+ . .+.+...+.-| ..|.++++|+.|+|++|+
T Consensus 206 L~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~ 285 (498)
T KOG4237|consen 206 LPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNK 285 (498)
T ss_pred cchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCc
Confidence 11 00000000 01111 1 12222332333 469999999999999999
Q ss_pred CCCCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCCCCCCcccccccCcccccccccccccCCccc
Q 004400 243 LRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAESSCQKRSVTGIVSCLRSVQCPKTYY 320 (756)
Q Consensus 243 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 320 (756)
|+++-+..|.++..++.|.|.+|+|...-...+ +..|+.|++.+|++++..+.++-....+..+..-.+++.|.+...
T Consensus 286 i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~ 365 (498)
T KOG4237|consen 286 ITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLA 365 (498)
T ss_pred cchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchH
Confidence 999999999999999999999999973333333 678899999999999999988888888888877889999988765
Q ss_pred ccccc
Q 004400 321 SLHIN 325 (756)
Q Consensus 321 ~~~~~ 325 (756)
++.-+
T Consensus 366 wl~~W 370 (498)
T KOG4237|consen 366 WLGEW 370 (498)
T ss_pred HHHHH
Confidence 55433
No 429
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=2.3e-19 Score=204.78 Aligned_cols=239 Identities=25% Similarity=0.335 Sum_probs=120.5
Q ss_pred ccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcCCCcEEEeec
Q 004400 19 NQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANISTLVNLTVQY 97 (756)
Q Consensus 19 ~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 97 (756)
...|+|++|+|+ .+|+.+. ++|+.|++.+|+|+ .+|.. .+.| .|++.+|+++ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 345667777776 4565554 35667777777766 34432 2344 3556666666 33432 24556666666
Q ss_pred CcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcC-----------------cC
Q 004400 98 NQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQN-----------------WT 160 (756)
Q Consensus 98 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----------------l~ 160 (756)
|.|+ .+|..+ .+|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++ +|..... ..
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~ 342 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPS 342 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCcccccccccccCcccccccccc
Confidence 6665 333322 34555555555555 33331 2445555555555552 3321110 12
Q ss_pred CCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccC
Q 004400 161 KLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSF 240 (756)
Q Consensus 161 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 240 (756)
+|+.|+|++|+|++ +|.. ..+|+.|++++|.+..++.. ..+|+.|+|++|+|++ +|.. .++|+.|++++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~ 411 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSG 411 (788)
T ss_pred ccceEecCCCccCC-CCCC---CcccceehhhccccccCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccC
Confidence 45555555555552 3322 13444455555554432211 1235556666666653 3322 24556666666
Q ss_pred CcCCCCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCCCCC
Q 004400 241 NRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGS 293 (756)
Q Consensus 241 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~~~~ 293 (756)
|+|++ +|..+ .+|+.|++++|+|+ .+|..+ ++.+..|++++|++++..
T Consensus 412 N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~ 461 (788)
T PRK15387 412 NRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 461 (788)
T ss_pred CcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchH
Confidence 66653 44322 34555666666665 455544 455666666666666543
No 430
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=1e-19 Score=209.07 Aligned_cols=244 Identities=23% Similarity=0.366 Sum_probs=188.5
Q ss_pred eccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcCCCcEEEee
Q 004400 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANISTLVNLTVQ 96 (756)
Q Consensus 18 ~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~~L~~L~L~ 96 (756)
....|+|++++++ .+|..+. +.|+.|+|++|+|+ .+|..+. +.| .|++.+|++. .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 3567889999988 4676664 67999999999999 5665443 345 5788888887 5677664 479999999
Q ss_pred cCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcCCC
Q 004400 97 YNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPI 176 (756)
Q Consensus 97 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 176 (756)
+|++. .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|+++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-C
Confidence 99998 7787765 48999999999999 5777664 58999999999999 4665443 478999999999984 5
Q ss_pred CccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCCCCccCcCCCC
Q 004400 177 PSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYD 256 (756)
Q Consensus 177 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 256 (756)
|..+. ++|+.|++++|.++.++.. +. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|.|+ .+|..+. .+
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt~LP~~-l~-~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~s 389 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALTSLPAS-LP-PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AA 389 (754)
T ss_pred Ccccc--ccceeccccCCccccCChh-hc-CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HH
Confidence 65543 6899999999988875432 22 46999999999998 5676553 68999999999999 4665554 36
Q ss_pred CCeEEecCccccccCCchh------hcCCCeeEeecCCCCC
Q 004400 257 VDYIYFAGNLLTGAIPPWM------LERGDKIDLSYNNFTD 291 (756)
Q Consensus 257 L~~L~ls~N~l~~~~p~~~------~~~l~~l~ls~N~l~~ 291 (756)
|+.|++++|+|+ .+|..+ .+.+..+++.+|+++.
T Consensus 390 L~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 390 LQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 889999999998 666554 3567889999999874
No 431
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=6.5e-19 Score=172.98 Aligned_cols=136 Identities=15% Similarity=0.241 Sum_probs=107.0
Q ss_pred cccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhC-----CCCceeeEeeEEEeCC---e-EEE
Q 004400 419 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISAL-----QHPNLVKLYGCCIEGN---Q-LLL 489 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l 489 (756)
...+.||+|+||.||. +++....+||++........+.+.+|+.+++.+ .||||++++|++.++. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 4567999999999995 443344479988665444567899999999999 5799999999998863 4 347
Q ss_pred EEEe--cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH-HHHHcCCCCCeEcCCCCCCceEecC----CCCEEEccCCc
Q 004400 490 IYEY--LENNSLARALFEHRLKLDWPTRRRICLGIARGL-AYLHGESRIKVVHRDIKATNVLLDK----DLNSKISDFGL 562 (756)
Q Consensus 490 V~e~--~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~g~~~iiH~Dikp~Nill~~----~~~~kl~DFGl 562 (756)
|+|| +.+|+|.+++.+. .+++. ..++.+++.++ +|||+++ ||||||||+|||++. ++.++|+||+-
T Consensus 83 I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 8999 5589999999653 35555 35677888777 9999997 999999999999974 34799999554
Q ss_pred c
Q 004400 563 A 563 (756)
Q Consensus 563 a 563 (756)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 4
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=2.7e-19 Score=181.21 Aligned_cols=231 Identities=19% Similarity=0.206 Sum_probs=148.8
Q ss_pred CccccCcccCCCCccEEEeec-cCCcEEEEEEccccC---cccHHHHHHHHHHHHhCCC----------CceeeEeeEEE
Q 004400 417 NFATDNNIGEGGFGPVYKGLL-ADGTAIAVKQLSSKS---KQGNREFINEIGMISALQH----------PNLVKLYGCCI 482 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 482 (756)
.+.....||.|+++.||.++. .+++.+|+|.+.... ....+.+.+|.-....+.+ -.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 445668999999999999995 568999999875432 2234566767655555332 12222233322
Q ss_pred e---------CC--------eEEEEEEecCCCCHHHHHH---hcCC---CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEc
Q 004400 483 E---------GN--------QLLLIYEYLENNSLARALF---EHRL---KLDWPTRRRICLGIARGLAYLHGESRIKVVH 539 (756)
Q Consensus 483 ~---------~~--------~~~lV~e~~~~gsL~~~l~---~~~~---~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH 539 (756)
. .. ..+++|+-+ -++|.+.+. .... .+....+..+..|+++.+++||+.| ++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence 1 11 235677777 458887764 2221 2344556777799999999999998 999
Q ss_pred CCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccCccCCchHhhhcC--------CCCcccchhhHHHHHHHHH
Q 004400 540 RDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRG--------HLTEKADVYSFGIVALEIV 611 (756)
Q Consensus 540 ~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~Dv~slGv~l~ell 611 (756)
+||||+|++++.+|.++|+||+.....+..... ...+..|.+||..... .++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999999887754432221 2345789999987542 4788999999999999999
Q ss_pred hCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCC
Q 004400 612 SGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIR 673 (756)
Q Consensus 612 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~R 673 (756)
+|+.||.........+| .+ ..+. +.+..+..++..+++.+|++|
T Consensus 245 C~~lPf~~~~~~~~~~~------------~f-----~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW------------DF-----SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG------------GG-----TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc------------cc-----hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999965543222221 11 1223 455668999999999999988
No 433
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=3.3e-19 Score=204.52 Aligned_cols=251 Identities=20% Similarity=0.214 Sum_probs=187.2
Q ss_pred hHHHhhcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCC---CCceeeEeeEEEeCCe
Q 004400 410 QIKAATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQ---HPNLVKLYGCCIEGNQ 486 (756)
Q Consensus 410 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~ 486 (756)
+.+.....|.+.+.||+|+||+||+|...+|+.||+|+-+....+ +|.--.+++.+|+ -+-|..+..++.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 344556789999999999999999999888999999998776655 2333334555555 3456666677777888
Q ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-------CCCEEEcc
Q 004400 487 LLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-------DLNSKISD 559 (756)
Q Consensus 487 ~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-------~~~~kl~D 559 (756)
.++|+||.+.|+|.+++. ....++|.-.+.++.|+++.+++||..+ ||||||||+|+||.. ...++|+|
T Consensus 769 S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred ceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEe
Confidence 999999999999999997 5568999999999999999999999997 999999999999942 34589999
Q ss_pred CCccccCc-ccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcc
Q 004400 560 FGLAKLDE-EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL 638 (756)
Q Consensus 560 FGla~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (756)
||.+-.+. ..+......+++|-.+-.+|+..++.++.++|-|.++-+++.|+.|+.- . ...+.
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~-------------q--~~~g~- 908 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM-------------E--VKNGS- 908 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH-------------H--hcCCc-
Confidence 99986432 1222345567899999999999999999999999999999999998631 0 01111
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhccC
Q 004400 639 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLECG 686 (756)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 686 (756)
...++......+..+. .-+++...+..|-..=|...++...|+++
T Consensus 909 ~~~~~~~~~Ry~~~~~---W~~~F~~lLN~~~~~~p~l~~lr~~~~~~ 953 (974)
T KOG1166|consen 909 SWMVKTNFPRYWKRDM---WNKFFDLLLNPDCDTLPNLQELRTELEEV 953 (974)
T ss_pred ceeccccchhhhhHHH---HHHHHHHHhCcCcccchhHHHHHHHHHHH
Confidence 1112222111222222 34555566666656667777887777755
No 434
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.79 E-value=4.5e-19 Score=202.44 Aligned_cols=226 Identities=24% Similarity=0.338 Sum_probs=158.5
Q ss_pred eccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcceeeccCccccccCCccCc------------
Q 004400 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLNISLIANRLKGPIPKYLA------------ 85 (756)
Q Consensus 18 ~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~l~l~~n~~~~~~p~~l~------------ 85 (756)
.++.|+|.+|+++. +|. .+++|+.|+|++|+|+ .+|....+|. .|++.+|.+. .+|..+.
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~lp~sL~--~L~Ls~N~L~-~Lp~lp~~L~~L~Ls~N~L 294 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVLPPGLL--ELSIFSNPLT-HLPALPSGLCKLWIFGNQL 294 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCcccccc--eeeccCCchh-hhhhchhhcCEEECcCCcc
Confidence 57888888888885 454 2477888888888888 4554433222 2444455444 2222111
Q ss_pred -----CcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcC
Q 004400 86 -----NISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWT 160 (756)
Q Consensus 86 -----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 160 (756)
.+++|+.|+|++|+|++ +|... .+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|+ .+|.. ..
T Consensus 295 t~LP~~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls-~LP~l---p~ 362 (788)
T PRK15387 295 TSLPVLPPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLA-SLPTL---PS 362 (788)
T ss_pred ccccccccccceeECCCCcccc-CCCCc---ccccccccccCccc-ccccc---ccccceEecCCCccC-CCCCC---Cc
Confidence 12455666666666652 33311 24555566666665 34431 147999999999999 46653 35
Q ss_pred CCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccC
Q 004400 161 KLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSF 240 (756)
Q Consensus 161 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 240 (756)
+|+.|++++|+|.. +|.. ..+|+.|++++|.+...+.. ..+|+.|++++|.|++ +|..+ .+|+.|+|++
T Consensus 363 ~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~ 431 (788)
T PRK15387 363 ELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYR 431 (788)
T ss_pred ccceehhhcccccc-Cccc---ccccceEEecCCcccCCCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhcc
Confidence 78889999999994 6654 35799999999999875532 2369999999999995 66543 5788999999
Q ss_pred CcCCCCCCccCcCCCCCCeEEecCccccccCCchh
Q 004400 241 NRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM 275 (756)
Q Consensus 241 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 275 (756)
|+|+ .+|..+..+++|+.|+|++|+|++.+|..+
T Consensus 432 NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 432 NQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred Cccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 9999 789999999999999999999998887755
No 435
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.77 E-value=3.5e-18 Score=209.94 Aligned_cols=260 Identities=20% Similarity=0.254 Sum_probs=175.4
Q ss_pred cceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcCCCcEE
Q 004400 15 QKTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANISTLVNL 93 (756)
Q Consensus 15 ~~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~~L~~L 93 (756)
....++.|+|.+|++. .++..+..+++|+.|+|++|...+.+|. +..++.| .|++.+|.....+|..+.++++|+.|
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 4578889999999887 5677888899999999998765456774 7777888 48888888888899999999999999
Q ss_pred EeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCc--------------
Q 004400 94 TVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNW-------------- 159 (756)
Q Consensus 94 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-------------- 159 (756)
++++|..-+.+|..+ ++++|+.|+|++|.....+|.. .++|+.|+|++|.++ .+|..+ .+
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~ 760 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSE 760 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchh
Confidence 999875444777665 7889999999988655556643 457888888888877 455433 23
Q ss_pred -----------------CCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCC
Q 004400 160 -----------------TKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGE 222 (756)
Q Consensus 160 -----------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 222 (756)
++|+.|+|++|...+.+|..++++++|+.|++++|......+......+|+.|+|++|.....
T Consensus 761 ~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~ 840 (1153)
T PLN03210 761 KLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRT 840 (1153)
T ss_pred hccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCcccc
Confidence 355666666666555666666666666666666654433333333333566666666654444
Q ss_pred CCccccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCc-cccccCCchh--hcCCCeeEeecC
Q 004400 223 LPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGN-LLTGAIPPWM--LERGDKIDLSYN 287 (756)
Q Consensus 223 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N-~l~~~~p~~~--~~~l~~l~ls~N 287 (756)
+|.. .++|+.|+|++|.++ .+|..+..+++|+.|+|++| .+. .+|... ++.++.++++++
T Consensus 841 ~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 841 FPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred cccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 4432 345666666666666 45666666666666666663 344 344333 455555565544
No 436
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.76 E-value=1.7e-18 Score=199.15 Aligned_cols=226 Identities=22% Similarity=0.321 Sum_probs=184.1
Q ss_pred CCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcEEec
Q 004400 41 TFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHL 119 (756)
Q Consensus 41 ~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 119 (756)
.+...|++++++++ .+|..+. +.+ .|++.+|++. .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 45789999999999 5776554 344 5888899888 5676654 58999999999999 6777654 47999999
Q ss_pred cCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCC
Q 004400 120 SSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEA 199 (756)
Q Consensus 120 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 199 (756)
++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|.+...
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccC
Confidence 999999 7787764 58999999999999 5777664 589999999999994 666554 5799999999999875
Q ss_pred CccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCccccccCCchhhcCC
Q 004400 200 TFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERG 279 (756)
Q Consensus 200 ~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~l 279 (756)
+... ..+|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|.|+ .+|..+...+
T Consensus 320 P~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~~sL 390 (754)
T PRK15370 320 PETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLPAAL 390 (754)
T ss_pred Cccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHHHHH
Confidence 4322 2469999999999995 676653 79999999999998 5776553 68999999999999 6787777789
Q ss_pred CeeEeecCCCCCCC
Q 004400 280 DKIDLSYNNFTDGS 293 (756)
Q Consensus 280 ~~l~ls~N~l~~~~ 293 (756)
+.|++++|+++..+
T Consensus 391 ~~LdLs~N~L~~LP 404 (754)
T PRK15370 391 QIMQASRNNLVRLP 404 (754)
T ss_pred HHHhhccCCcccCc
Confidence 99999999998653
No 437
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-20 Score=208.42 Aligned_cols=262 Identities=24% Similarity=0.322 Sum_probs=153.2
Q ss_pred eccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcCCCcEEEee
Q 004400 18 VNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTLVNLTVQ 96 (756)
Q Consensus 18 ~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L~~L~L~ 96 (756)
+++.|+...|-++...+.... .+|+++++++|+++ .+|.+++.+..|+ +...+|++ ..+|..+..+++|+.|.+.
T Consensus 220 ~l~~L~a~~n~l~~~~~~p~p--~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l-~~lp~ri~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLDVHPVP--LNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRL-VALPLRISRITSLVSLSAA 295 (1081)
T ss_pred chheeeeccCcceeecccccc--ccceeeecchhhhh-cchHHHHhcccceEecccchhH-HhhHHHHhhhhhHHHHHhh
Confidence 445555555555533332221 45666666666666 4446666666664 45555555 3666666666666666666
Q ss_pred cCcccccCCcccCCCCCCcEEeccCCeecccCCccc-cCCC-CCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcC
Q 004400 97 YNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTF-AKLT-NMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAG 174 (756)
Q Consensus 97 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 174 (756)
+|.++ .+|+....+++|++|+|..|+|. ..|+.+ ..+. .|..|+.+.|++.......=..++.|+.|++.+|.|+.
T Consensus 296 ~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 296 YNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 66666 56666666666666666666666 444432 2222 14445555555542211111223456666666666665
Q ss_pred CCCccccCCCCCCeEEccCCCCCCCCcccccccc-ccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCCCCccCcC
Q 004400 175 PIPSGIFSLENLTDLRISDLNGPEATFPQLGNMK-MTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDD 253 (756)
Q Consensus 175 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 253 (756)
..-..+.+..+|+.|+|++|.+..++...+.++. |+.|+|++|+|+ .+|+.+..+..|+.|...+|++. ..| .+..
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~ 450 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQ 450 (1081)
T ss_pred cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhh
Confidence 5555566666666666666666666666555553 666677777776 55666666677777777667666 555 5666
Q ss_pred CCCCCeEEecCcccc-ccCCchhh-cCCCeeEeecCC
Q 004400 254 LYDVDYIYFAGNLLT-GAIPPWML-ERGDKIDLSYNN 288 (756)
Q Consensus 254 l~~L~~L~ls~N~l~-~~~p~~~~-~~l~~l~ls~N~ 288 (756)
+++|+.+|+|.|.|+ ..+|.... ++|+.||++||.
T Consensus 451 l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 451 LPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred cCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 677777777777665 23343333 666777777766
No 438
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.76 E-value=9.9e-18 Score=206.02 Aligned_cols=271 Identities=19% Similarity=0.211 Sum_probs=168.5
Q ss_pred eeccceeccccccccC------cccccCCcccCCCC-CCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCcc
Q 004400 12 FWKQKTVNQKRVLKEQ------NLTGVLPPKLAELT-FLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKY 83 (756)
Q Consensus 12 ~~~~~~~~~~l~L~~~------~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~ 83 (756)
.|+++..++.|.+..+ ++...+|+.|..++ +|+.|++.+|.++ .+|..|. ...| +|++.+|++. .+|..
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f~-~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNFR-PENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcCC-ccCCcEEECcCcccc-ccccc
Confidence 3677777777776543 23345566565553 4666666666665 5555553 2333 4666666554 45555
Q ss_pred CcCcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCc
Q 004400 84 LANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLE 163 (756)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 163 (756)
+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|.....+|..+..+++|+.|++++|.....+|..+ ++++|+
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~ 707 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCC
Confidence 66666666666666543335543 6666666666666665444666666666666666666654333555544 566666
Q ss_pred EEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCcc-----------------------------cc-ccccccEEE
Q 004400 164 KLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFP-----------------------------QL-GNMKMTKLI 213 (756)
Q Consensus 164 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~-----------------------------~~-~~~~L~~L~ 213 (756)
.|+|++|...+.+|.. .++|+.|++++|.+...+.. .. ...+|+.|+
T Consensus 708 ~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~ 784 (1153)
T PLN03210 708 RLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLF 784 (1153)
T ss_pred EEeCCCCCCccccccc---cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchhee
Confidence 6666666544444432 23455555555554432211 00 112588889
Q ss_pred cccccccCCCCccccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCccccccCCchhhcCCCeeEeecCCCCCC
Q 004400 214 LRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWMLERGDKIDLSYNNFTDG 292 (756)
Q Consensus 214 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~l~~l~ls~N~l~~~ 292 (756)
|++|...+.+|..++++++|+.|+|++|..-+.+|..+ .+++|+.|++++|.....+|. ...+++.|++++|.++..
T Consensus 785 Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~-~~~nL~~L~Ls~n~i~~i 861 (1153)
T PLN03210 785 LSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD-ISTNISDLNLSRTGIEEV 861 (1153)
T ss_pred CCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc-cccccCEeECCCCCCccC
Confidence 99998877889999999999999999886555777665 688888888888765445553 246778888888887754
No 439
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=1.1e-17 Score=167.07 Aligned_cols=134 Identities=19% Similarity=0.305 Sum_probs=113.8
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEccccCcc--------cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQ--------GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
+.||+|++|.||+|.. +|..|++|........ ....+.+|++++..++|++++....++.+....++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6778899976543211 124577899999999999988877787788889999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
++|++|.+++.... + .+..++.+++.+|.++|+.+ ++|||++|.||+++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986432 2 88899999999999999986 99999999999999 78899999999875
No 440
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=2.7e-20 Score=166.62 Aligned_cols=161 Identities=30% Similarity=0.518 Sum_probs=122.1
Q ss_pred CcCcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCc
Q 004400 84 LANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLE 163 (756)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 163 (756)
+.++++.+.|.||+|+++ .+|+.+..|.+|+.|++++|+++ .+|..++.+++|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 556778888889999998 77888888999999999999988 78888888999999999999888 7888888888888
Q ss_pred EEEccCCcCcC-CCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCc
Q 004400 164 KLFIQPSGLAG-PIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNR 242 (756)
Q Consensus 164 ~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 242 (756)
.|+|.+|++.. .+|..|+.++.|+.|++++|. +. .+|..++++++|+.|.+..|.
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dnd-----------------------fe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDND-----------------------FE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCC-----------------------cc-cCChhhhhhcceeEEeeccCc
Confidence 88888888863 478888888877777766654 44 445556666666666666666
Q ss_pred CCCCCCccCcCCCCCCeEEecCccccccCCc
Q 004400 243 LRGQIPSNFDDLYDVDYIYFAGNLLTGAIPP 273 (756)
Q Consensus 243 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 273 (756)
+- .+|..++.+..|+.|.+.+|+++ .+|+
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlpp 190 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPP 190 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecCh
Confidence 65 56666666666666666666665 4443
No 441
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.74 E-value=6.3e-20 Score=202.69 Aligned_cols=269 Identities=23% Similarity=0.342 Sum_probs=215.5
Q ss_pred ceeccccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcCCCcEEE
Q 004400 16 KTVNQKRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTLVNLT 94 (756)
Q Consensus 16 ~~~~~~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L~~L~ 94 (756)
-..+++++++.|++++. |+.+..+.+|+.|+..+|+|. .+|..+...+.|+ ++...|.+. -+|+.+.++++|+.|+
T Consensus 240 p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhhcc-hHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 35789999999999955 699999999999999999996 8998888888885 666667666 7888899999999999
Q ss_pred eecCcccccCCcccCCC-C-CCcEEeccCCeecccCCc-cccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCc
Q 004400 95 VQYNQFSGELPEELGSL-L-NLEKLHLSSNNFTGELPK-TFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSG 171 (756)
Q Consensus 95 L~~N~l~~~~p~~~~~l-~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 171 (756)
|..|+|. .+|+.+... . .|..|+.+.|++. ..|. .=...+.|+.|+|.+|.|+...-..+.+..+|+.|+|++|+
T Consensus 317 L~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 317 LQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred ehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccc
Confidence 9999999 777654433 2 3788999999998 4552 22246789999999999998888889999999999999999
Q ss_pred CcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCC-CCcc
Q 004400 172 LAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQ-IPSN 250 (756)
Q Consensus 172 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~ 250 (756)
|.......+.++..|++|++|+|.++.++........|+.|...+|++. ..| .+..++.|+.+|||.|+|+.. +|..
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~ 472 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEA 472 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhh
Confidence 9955556788899999999999999998854444456999999999999 777 799999999999999999843 4443
Q ss_pred CcCCCCCCeEEecCccccccCCchh---hcCCCeeEeecCCCCCCC
Q 004400 251 FDDLYDVDYIYFAGNLLTGAIPPWM---LERGDKIDLSYNNFTDGS 293 (756)
Q Consensus 251 ~~~l~~L~~L~ls~N~l~~~~p~~~---~~~l~~l~ls~N~l~~~~ 293 (756)
..+ ++|++|||++|... ...... +..+...+++-|+..++.
T Consensus 473 ~p~-p~LkyLdlSGN~~l-~~d~~~l~~l~~l~~~~i~~~~~~d~~ 516 (1081)
T KOG0618|consen 473 LPS-PNLKYLDLSGNTRL-VFDHKTLKVLKSLSQMDITLNNTPDGN 516 (1081)
T ss_pred CCC-cccceeeccCCccc-ccchhhhHHhhhhhheecccCCCCccc
Confidence 333 89999999999863 222222 344455555555444433
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=6.8e-20 Score=195.50 Aligned_cols=269 Identities=20% Similarity=0.216 Sum_probs=175.4
Q ss_pred ccccccCccc-ccCCcccCCCCCCCEEEccCCcccCc----cCcccccCCcc-eeeccCcccc------ccCCccCcCcC
Q 004400 21 KRVLKEQNLT-GVLPPKLAELTFLQDIDLTLNYLSGT----IPSQWASLPLL-NISLIANRLK------GPIPKYLANIS 88 (756)
Q Consensus 21 ~l~L~~~~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L-~l~l~~n~~~------~~~p~~l~~l~ 88 (756)
.|+|..++++ +.....+..+..|+.|++++|.++.. ++..+...+.+ ++.+..+.+. ..++..+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4667777776 34445566677788888888887532 34444455544 4666666555 23455677788
Q ss_pred CCcEEEeecCcccccCCcccCCCCC---CcEEeccCCeecc----cCCccccCC-CCCCEEEeeCCccccc----CChhh
Q 004400 89 TLVNLTVQYNQFSGELPEELGSLLN---LEKLHLSSNNFTG----ELPKTFAKL-TNMKDFRISDNQFTGQ----IPSFI 156 (756)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~~ 156 (756)
+|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888887666666665555 8888888888873 233445566 7888888888888832 34456
Q ss_pred cCcCCCcEEEccCCcCcCC----CCccccCCCCCCeEEccCCCCCCCCcccc----c-cccccEEEcccccccCCCCccc
Q 004400 157 QNWTKLEKLFIQPSGLAGP----IPSGIFSLENLTDLRISDLNGPEATFPQL----G-NMKMTKLILRNCNITGELPRYL 227 (756)
Q Consensus 157 ~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~~~~~~~~~~----~-~~~L~~L~L~~n~l~~~~p~~~ 227 (756)
..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+.......+ . ..+|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 6777888888888888742 33445566788888888887765433221 1 2247888888887775333222
Q ss_pred c-----CCCCCcEEEccCCcCCC----CCCccCcCCCCCCeEEecCccccccCCc----hh--h-cCCCeeEeecCCC
Q 004400 228 G-----KMTKLKVLDLSFNRLRG----QIPSNFDDLYDVDYIYFAGNLLTGAIPP----WM--L-ERGDKIDLSYNNF 289 (756)
Q Consensus 228 ~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~p~----~~--~-~~l~~l~ls~N~l 289 (756)
. ..+.|+.|++++|.++. .+...+..+++|+++++++|.++..-.. .+ . ..++.+|+.+|++
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 2 23678888888887762 2334455667788888888887743211 11 2 4566777766653
No 443
>smart00090 RIO RIO-like kinase.
Probab=99.74 E-value=1e-17 Score=168.78 Aligned_cols=144 Identities=19% Similarity=0.179 Sum_probs=111.9
Q ss_pred CccccCcccCCCCccEEEee--ccCCcEEEEEEccccCcc------------------------cHHHHHHHHHHHHhCC
Q 004400 417 NFATDNNIGEGGFGPVYKGL--LADGTAIAVKQLSSKSKQ------------------------GNREFINEIGMISALQ 470 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 470 (756)
.|.+.+.||+|+||.||+|+ ..+|+.||+|.+...... ....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 578999999998643210 0123568999999997
Q ss_pred CC--ceeeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceE
Q 004400 471 HP--NLVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVL 548 (756)
Q Consensus 471 h~--niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nil 548 (756)
+. .+.+++++ ...++||||+++++|....... ..+.......++.|++.++++||+.| .|+||||||+||+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIl 181 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNIL 181 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEE
Confidence 53 33444443 2358999999998887654322 34566677899999999999999885 4999999999999
Q ss_pred ecCCCCEEEccCCccccCcc
Q 004400 549 LDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 549 l~~~~~~kl~DFGla~~~~~ 568 (756)
++ ++.++|+|||.+...++
T Consensus 182 i~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 182 VH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred EE-CCCEEEEEChhhhccCC
Confidence 99 78999999999875443
No 444
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2.3e-17 Score=163.16 Aligned_cols=130 Identities=23% Similarity=0.324 Sum_probs=107.1
Q ss_pred cccCCCCccEEEeeccCCcEEEEEEccccCcc--------cHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEec
Q 004400 423 NIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQ--------GNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYL 494 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 494 (756)
.||+|+||.||+|.+ ++..|++|........ ...++.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 5688999986543211 1255778999999999887665555666777789999999
Q ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 495 ENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 495 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
+|++|.+.+..... .++.+++.+|++||+.| ++|||++|.||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988754321 78999999999999987 99999999999999 78999999999875
No 445
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=3e-17 Score=165.50 Aligned_cols=196 Identities=26% Similarity=0.353 Sum_probs=140.0
Q ss_pred CCCceeeEeeEEEe---------------------------CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Q 004400 470 QHPNLVKLYGCCIE---------------------------GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGI 522 (756)
Q Consensus 470 ~h~niv~l~~~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i 522 (756)
+|||||++.++|.+ +...|+||.-.+. +|..++-.. ..+...+.-++.|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~--~~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR--HRSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC--CCchHHHHHHHHHH
Confidence 59999999998764 2347899987765 788887543 45677788899999
Q ss_pred HHHHHHHHcCCCCCeEcCCCCCCceEec--CCC--CEEEccCCccccCcccCc-----ceeeccccCccCCchHhhhcCC
Q 004400 523 ARGLAYLHGESRIKVVHRDIKATNVLLD--KDL--NSKISDFGLAKLDEEENT-----HISTRVAGTIGYMAPEYAMRGH 593 (756)
Q Consensus 523 a~~L~~LH~~g~~~iiH~Dikp~Nill~--~~~--~~kl~DFGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~ 593 (756)
++|+.|||.+| |.|||+|++|||+. +|+ ...|+|||.+--.+...- ......-|.-.-||||+.....
T Consensus 351 LEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999997 99999999999994 333 368999998753332111 1111234777899999986422
Q ss_pred ------CCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhc
Q 004400 594 ------LTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCAN 667 (756)
Q Consensus 594 ------~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~ 667 (756)
--.|+|.|+.|.+.||+++...||+...+..+-... .++.++..+.+.. ++ .+.+++...++
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~---Yqe~qLPalp~~v-----pp----~~rqlV~~lL~ 495 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT---YQESQLPALPSRV-----PP----VARQLVFDLLK 495 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh---hhhhhCCCCcccC-----Ch----HHHHHHHHHhc
Confidence 134899999999999999999999775544322111 2333343333332 22 37888899999
Q ss_pred CCCCCCCCHHHHHHHh
Q 004400 668 ASPTIRPSMSSVLRML 683 (756)
Q Consensus 668 ~~P~~RPt~~ev~~~L 683 (756)
.||++|++..-....|
T Consensus 496 r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVL 511 (598)
T ss_pred CCccccCCccHHHhHH
Confidence 9999999876554443
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=3.7e-18 Score=179.72 Aligned_cols=172 Identities=23% Similarity=0.338 Sum_probs=127.9
Q ss_pred CeEEEEEEecCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCc
Q 004400 485 NQLLLIYEYLENNSLARALF--EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGL 562 (756)
Q Consensus 485 ~~~~lV~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGl 562 (756)
.+.|+.|++|...+|.+||. ......++.....++.|++.|++| ++ .+|||+||.||++..+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhh
Confidence 35789999999999999996 334567889999999999999999 54 89999999999999999999999999
Q ss_pred cccCcccC-----cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHh-CCCCCCccchhhHHHHHHHHHhcC
Q 004400 563 AKLDEEEN-----THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVS-GRSNVTKEDMFYLLDWALVLKEQG 636 (756)
Q Consensus 563 a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 636 (756)
........ ....+...||..||+||.+.+..|+.|+||||+|++++|+++ =..++.....+ ...+.+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~-------~d~r~g 475 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATL-------TDIRDG 475 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhh-------hhhhcC
Confidence 87655444 223455679999999999999999999999999999999996 12221110000 001122
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHH
Q 004400 637 KLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSS 678 (756)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~e 678 (756)
.+. +....+++. =..++.+++...|.+||++.+
T Consensus 476 ~ip----~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 476 IIP----PEFLQDYPE-----EYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred CCC----hHHhhcCcH-----HHHHHHHhcCCCcccCchHHH
Confidence 221 111111221 346788999999999995444
No 447
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=1.3e-19 Score=162.29 Aligned_cols=161 Identities=28% Similarity=0.373 Sum_probs=143.8
Q ss_pred cCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCC
Q 004400 108 LGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLT 187 (756)
Q Consensus 108 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 187 (756)
+.++.+.+.|.|++|+++ .+|..++.|.+|+.|++++|+++ .+|..++.++.|+.|+++-|++. .+|.+|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 557888999999999999 77778999999999999999999 89999999999999999999998 8999999999999
Q ss_pred eEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCccc
Q 004400 188 DLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLL 267 (756)
Q Consensus 188 ~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 267 (756)
.||+..|++.+. .+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+.+|.+
T Consensus 106 vldltynnl~e~----------------------~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 106 VLDLTYNNLNEN----------------------SLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred hhhccccccccc----------------------cCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCch
Confidence 988877654432 45667888999999999999999 8899999999999999999999
Q ss_pred cccCCchh--hcCCCeeEeecCCCCCCCCc
Q 004400 268 TGAIPPWM--LERGDKIDLSYNNFTDGSAE 295 (756)
Q Consensus 268 ~~~~p~~~--~~~l~~l~ls~N~l~~~~~~ 295 (756)
- .+|..+ +..++.|.+.+|.++-.+++
T Consensus 163 l-~lpkeig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 163 L-SLPKEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred h-hCcHHHHHHHHHHHHhcccceeeecChh
Confidence 8 788877 88899999999999876653
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.72 E-value=3.4e-17 Score=161.58 Aligned_cols=140 Identities=21% Similarity=0.217 Sum_probs=110.4
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCc----------------------ccHHHHHHHHHHHHhCCCC
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK----------------------QGNREFINEIGMISALQHP 472 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~ 472 (756)
...|...+.||+|+||.||+|...+|+.||||++..... .....+..|..++.++.|+
T Consensus 14 ~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 14 GVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred CchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 334778899999999999999988899999998654210 0112356788899999887
Q ss_pred c--eeeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEec
Q 004400 473 N--LVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLD 550 (756)
Q Consensus 473 n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~ 550 (756)
+ +.+.++ ....++||||+++++|.+.... .....++.+++.++.++|+.| |+||||||+||+++
T Consensus 94 ~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~ 159 (198)
T cd05144 94 GFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVD 159 (198)
T ss_pred CCCCCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEc
Confidence 4 444443 2455899999999998765321 345678899999999999986 99999999999999
Q ss_pred CCCCEEEccCCccccCcc
Q 004400 551 KDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 551 ~~~~~kl~DFGla~~~~~ 568 (756)
+++.++|+|||++.....
T Consensus 160 ~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 160 DDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCcEEEEECCccccCCC
Confidence 999999999999965443
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=5.1e-17 Score=184.66 Aligned_cols=138 Identities=19% Similarity=0.278 Sum_probs=112.5
Q ss_pred hcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCc-------ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeE
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK-------QGNREFINEIGMISALQHPNLVKLYGCCIEGNQL 487 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 487 (756)
...|...+.||+|+||+||+|.+.+...++.+...+... ...+.+.+|+++++.++|++++..+.++.++...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 445567899999999999999876544333322222111 1235688999999999999999888888888888
Q ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 488 LLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 488 ~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
++||||+++++|.+++. .+..++.+++++|+|||+.+ ++||||||+||++ +++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999874 45778999999999999986 9999999999999 577899999999975
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.71 E-value=1.6e-17 Score=186.66 Aligned_cols=212 Identities=23% Similarity=0.303 Sum_probs=149.4
Q ss_pred hhcCccccCcccCCCCccEEEeecc-CCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLLA-DGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYE 492 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 492 (756)
...+|+.++.|..|+||.||..+++ ..+.+|+|.-+.. . +.+- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~-l-----ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN-L-----ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccccc-h-----hhhc--cccccCCccee-----------------
Confidence 3468999999999999999999865 4667888432211 1 1110 34444455554
Q ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCc-
Q 004400 493 YLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENT- 571 (756)
Q Consensus 493 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~- 571 (756)
|+-...+... ..++. +++.+++|||+-| |+|||+||+|.+++.-|.+|++|||+++.......
T Consensus 136 ----gDc~tllk~~-g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ----GDCATLLKNI-GPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ----chhhhhcccC-CCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 4444444322 23332 2378999999987 99999999999999999999999999874322110
Q ss_pred -----------c--eeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCcc
Q 004400 572 -----------H--ISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKL 638 (756)
Q Consensus 572 -----------~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (756)
+ ....++||+.|.|||++....|+..+|+|++|+|+||.+.|..||.++....++.... ....+.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vi--sd~i~w 277 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI--SDDIEW 277 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhh--hhhccc
Confidence 0 1234789999999999999999999999999999999999999999887766665332 111222
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 004400 639 MELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ 677 (756)
.+- ....++ +..+++.+.++.+|.+|--..
T Consensus 278 pE~-----dea~p~----Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 278 PEE-----DEALPP----EAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred ccc-----CcCCCH----HHHHHHHHHHHhChHhhcccc
Confidence 221 122233 377888899999999997433
No 451
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=7.3e-19 Score=187.56 Aligned_cols=255 Identities=22% Similarity=0.264 Sum_probs=198.7
Q ss_pred eccceeccccccccCcccc----cCCcccCCCCCCCEEEccCCcccC------ccCcccccCCcc-eeeccCccccccCC
Q 004400 13 WKQKTVNQKRVLKEQNLTG----VLPPKLAELTFLQDIDLTLNYLSG------TIPSQWASLPLL-NISLIANRLKGPIP 81 (756)
Q Consensus 13 ~~~~~~~~~l~L~~~~l~~----~~p~~l~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~L-~l~l~~n~~~~~~p 81 (756)
+..+..++.|+|+++.+++ .++..+...+.|+.|+++++.+.+ .++..+..++.| ++++.+|.+.+..+
T Consensus 19 ~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 98 (319)
T cd00116 19 LPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGC 98 (319)
T ss_pred HHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHH
Confidence 4666779999999999864 366677888899999999998872 234556677777 58899999987777
Q ss_pred ccCcCcCC---CcEEEeecCcccc----cCCcccCCC-CCCcEEeccCCeeccc----CCccccCCCCCCEEEeeCCccc
Q 004400 82 KYLANIST---LVNLTVQYNQFSG----ELPEELGSL-LNLEKLHLSSNNFTGE----LPKTFAKLTNMKDFRISDNQFT 149 (756)
Q Consensus 82 ~~l~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 149 (756)
..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+..+++|+.|+|++|.++
T Consensus 99 ~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 99 GVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIG 178 (319)
T ss_pred HHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCc
Confidence 77777766 9999999999983 334456677 8999999999999842 3445677889999999999998
Q ss_pred cc----CChhhcCcCCCcEEEccCCcCcCC----CCccccCCCCCCeEEccCCCCCCCCccccc------cccccEEEcc
Q 004400 150 GQ----IPSFIQNWTKLEKLFIQPSGLAGP----IPSGIFSLENLTDLRISDLNGPEATFPQLG------NMKMTKLILR 215 (756)
Q Consensus 150 ~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~------~~~L~~L~L~ 215 (756)
+. ++..+..+++|+.|+|++|.+.+. ++..+..+++|+.|++++|.+.......+. ..+|+.|+++
T Consensus 179 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~ 258 (319)
T cd00116 179 DAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLS 258 (319)
T ss_pred hHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEcc
Confidence 42 344566678999999999999743 345567789999999999998864333221 2479999999
Q ss_pred cccccC----CCCccccCCCCCcEEEccCCcCCCC----CCccCcCC-CCCCeEEecCccc
Q 004400 216 NCNITG----ELPRYLGKMTKLKVLDLSFNRLRGQ----IPSNFDDL-YDVDYIYFAGNLL 267 (756)
Q Consensus 216 ~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~ls~N~l 267 (756)
+|.++. .+...+..+++|++|++++|.++.. ....+... +.|+.|++.+|++
T Consensus 259 ~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 259 CNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 999973 2344567779999999999999954 44455555 7899999999875
No 452
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=2.2e-15 Score=141.48 Aligned_cols=135 Identities=21% Similarity=0.215 Sum_probs=115.0
Q ss_pred ccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCC--CceeeEeeEEEeCCeEEEEEEecCCC
Q 004400 420 TDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQH--PNLVKLYGCCIEGNQLLLIYEYLENN 497 (756)
Q Consensus 420 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~g 497 (756)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .+++++++++..++..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 34689999999999999754 7899999865433 4678999999999976 58999999988888999999999998
Q ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 498 SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 498 sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
.+... +......++.+++++++++|......++|||++|+||++++.+.+++.|||.++.
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 76543 5667788899999999999986444599999999999999988999999999874
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=2.3e-15 Score=147.14 Aligned_cols=136 Identities=24% Similarity=0.290 Sum_probs=97.5
Q ss_pred cCcccCCCCccEEEeeccCCcEEEEEEccccCcc--cHHHH----------------------HHHHHHHHhCCCCc--e
Q 004400 421 DNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQ--GNREF----------------------INEIGMISALQHPN--L 474 (756)
Q Consensus 421 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~E~~~l~~l~h~n--i 474 (756)
.+.||+|+||.||+|...+++.||||++...... ....+ ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999888999999988653211 11111 34566666664432 4
Q ss_pred eeEeeEEEeCCeEEEEEEecCCCCHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEcCCCCCCceEecCC
Q 004400 475 VKLYGCCIEGNQLLLIYEYLENNSLAR-ALFEHRLKLDWPTRRRICLGIARGLAYLHG-ESRIKVVHRDIKATNVLLDKD 552 (756)
Q Consensus 475 v~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~g~~~iiH~Dikp~Nill~~~ 552 (756)
.+.+++ ...++||||++++.+.. .+.... .. ..+..++.+++.++.++|. .+ |+||||||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-C
Confidence 444443 24589999999954321 111111 11 5678899999999999998 65 99999999999999 8
Q ss_pred CCEEEccCCccccCc
Q 004400 553 LNSKISDFGLAKLDE 567 (756)
Q Consensus 553 ~~~kl~DFGla~~~~ 567 (756)
+.++++|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 899999999997433
No 454
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.59 E-value=1.2e-14 Score=146.85 Aligned_cols=135 Identities=21% Similarity=0.260 Sum_probs=105.5
Q ss_pred cCccc-CCCCccEEEeeccCCcEEEEEEccccC-------------cccHHHHHHHHHHHHhCCCCce--eeEeeEEEeC
Q 004400 421 DNNIG-EGGFGPVYKGLLADGTAIAVKQLSSKS-------------KQGNREFINEIGMISALQHPNL--VKLYGCCIEG 484 (756)
Q Consensus 421 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 484 (756)
...|| .||.|+||.+... +..++||.+.... ......+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35787 8999999999875 6778998875321 1223567889999999998875 6777765432
Q ss_pred -C---eEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEcc
Q 004400 485 -N---QLLLIYEYLEN-NSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISD 559 (756)
Q Consensus 485 -~---~~~lV~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~D 559 (756)
. ..++||||++| .+|.+++... .++.. .+.+++.++.+||+.| |+||||||.|||++.++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 6998887542 34433 3678999999999997 99999999999999988999999
Q ss_pred CCcccc
Q 004400 560 FGLAKL 565 (756)
Q Consensus 560 FGla~~ 565 (756)
||.++.
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999874
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=3.1e-16 Score=177.25 Aligned_cols=251 Identities=23% Similarity=0.280 Sum_probs=186.4
Q ss_pred cCccccCcccCCCCccEEEeecc--CCcEEEEEEccccC--cccHHHHHHHHHHHHhCC-CCceeeEeeEEEeCCeEEEE
Q 004400 416 NNFATDNNIGEGGFGPVYKGLLA--DGTAIAVKQLSSKS--KQGNREFINEIGMISALQ-HPNLVKLYGCCIEGNQLLLI 490 (756)
Q Consensus 416 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 490 (756)
..|...+.||+|+|+.|-.+... ....+|+|.+.... .........|..+-..+. |+|++.+++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 35666678999999999988753 34556777765543 222334445777767776 99999999999999999999
Q ss_pred EEecCCCCHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCeEcCCCCCCceEecCCC-CEEEccCCccccCc
Q 004400 491 YEYLENNSLARAL-FEHRLKLDWPTRRRICLGIARGLAYLH-GESRIKVVHRDIKATNVLLDKDL-NSKISDFGLAKLDE 567 (756)
Q Consensus 491 ~e~~~~gsL~~~l-~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~g~~~iiH~Dikp~Nill~~~~-~~kl~DFGla~~~~ 567 (756)
++|..+|++.+.+ .......+...+..++.|+..++.|+| +.+ +.||||||+|.+++..+ ..+++|||+|....
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 9999999999888 444336777888899999999999999 776 99999999999999999 99999999998766
Q ss_pred c-cC-cceeecccc-CccCCchHhhhcC-CCCcccchhhHHHHHHHHHhCCCCCCccchhh--HHHHHHHHHhcCccccc
Q 004400 568 E-EN-THISTRVAG-TIGYMAPEYAMRG-HLTEKADVYSFGIVALEIVSGRSNVTKEDMFY--LLDWALVLKEQGKLMEL 641 (756)
Q Consensus 568 ~-~~-~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 641 (756)
. .+ .......+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+....... ...|.. . . ..
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~---~-~---~~ 249 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKS---N-K---GR 249 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecc---c-c---cc
Confidence 5 22 222344578 9999999999884 56788999999999999999999984332211 111211 0 0 01
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004400 642 VDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVL 680 (756)
Q Consensus 642 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~ 680 (756)
....+..... ....++..+++..+|..|.+.+++.
T Consensus 250 ~~~~~~~~~~----~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 250 FTQLPWNSIS----DQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cccCccccCC----hhhhhcccccccCCchhcccccccc
Confidence 0111112222 2356677788889999999988864
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.47 E-value=1.6e-15 Score=159.76 Aligned_cols=168 Identities=27% Similarity=0.431 Sum_probs=96.5
Q ss_pred eeccCccccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcc
Q 004400 69 ISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQF 148 (756)
Q Consensus 69 l~l~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 148 (756)
.+++.|++. .+|..+..+..|+.|.|++|.|. .+|..+++|..|++|+|+.|+++ .+|..++.|+ |+.|-+++|++
T Consensus 80 aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 80 ADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 455555554 55555555566666666666666 56666666666666666666666 5565565555 66666666666
Q ss_pred cccCChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCcccc
Q 004400 149 TGQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLG 228 (756)
Q Consensus 149 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~ 228 (756)
+ .+|..++.+..|..|+.+.|.+. .+|..++.+.+|+.|.+. .|++. .+|..+.
T Consensus 156 ~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vr-----------------------Rn~l~-~lp~El~ 209 (722)
T KOG0532|consen 156 T-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVR-----------------------RNHLE-DLPEELC 209 (722)
T ss_pred c-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHh-----------------------hhhhh-hCCHHHh
Confidence 6 55656665566666666666665 455555555555555444 44444 3333344
Q ss_pred CCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCcccc
Q 004400 229 KMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLT 268 (756)
Q Consensus 229 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 268 (756)
.| .|..||+|.|+++ .+|-.|..|..|++|-|.+|+|+
T Consensus 210 ~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 210 SL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred CC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 22 3555555555555 45555555555555555555555
No 457
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.47 E-value=1.9e-13 Score=150.14 Aligned_cols=145 Identities=21% Similarity=0.262 Sum_probs=103.5
Q ss_pred CccccCcccCCCCccEEEeeccCCcEEEEEEccccCccc----------------------------------------H
Q 004400 417 NFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQG----------------------------------------N 456 (756)
Q Consensus 417 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~ 456 (756)
.|+ .+.||.|++|.||+|++.+|+.||||+.+...... +
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 36899999999999999999999999986531110 0
Q ss_pred HHHHHHHHHHHhCC----CCceeeEeeEEE-eCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH-HHHHHH
Q 004400 457 REFINEIGMISALQ----HPNLVKLYGCCI-EGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIAR-GLAYLH 530 (756)
Q Consensus 457 ~~~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~-~L~~LH 530 (756)
-+|.+|+..+.+++ |.+-+.+-.++. .....++||||++|++|.+......... .+.+++..+++ .+..+|
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVL 274 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHH
Confidence 12455666555552 333334333332 2455799999999999988765322222 34556666666 478889
Q ss_pred cCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcc
Q 004400 531 GESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEE 568 (756)
Q Consensus 531 ~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~ 568 (756)
..| ++|+|+||.||+++.+++++++|||++....+
T Consensus 275 ~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 RDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred hCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 886 99999999999999999999999999976543
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.45 E-value=3.9e-15 Score=156.94 Aligned_cols=184 Identities=26% Similarity=0.416 Sum_probs=151.8
Q ss_pred cCcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcE
Q 004400 85 ANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEK 164 (756)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 164 (756)
..++--...||+.|++. .+|.++..+..|+.|.|++|.+. .+|..++.|..|+.|||+.|+++ .+|..++.|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 44566678889999998 88888888888999999999988 88888889999999999999988 7777777776 888
Q ss_pred EEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCcCC
Q 004400 165 LFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLR 244 (756)
Q Consensus 165 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 244 (756)
|.+++|+++ .+|..++.+..|..|| .+.|.+. .+|..++++.+|+.|++..|++.
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld-----------------------~s~nei~-slpsql~~l~slr~l~vrRn~l~ 202 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLD-----------------------VSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE 202 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhh-----------------------hhhhhhh-hchHHhhhHHHHHHHHHhhhhhh
Confidence 888888888 6787777666666555 5557776 67788999999999999999999
Q ss_pred CCCCccCcCCCCCCeEEecCccccccCCchh--hcCCCeeEeecCCCCCCCCccccccc
Q 004400 245 GQIPSNFDDLYDVDYIYFAGNLLTGAIPPWM--LERGDKIDLSYNNFTDGSAESSCQKR 301 (756)
Q Consensus 245 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~l~~l~ls~N~l~~~~~~~~~~~~ 301 (756)
.+|..+..| .|..||+|.|+++ .+|-.+ +..|+.|-|.+|+++.. +...|.+.
T Consensus 203 -~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP-PAqIC~kG 257 (722)
T KOG0532|consen 203 -DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP-PAQICEKG 257 (722)
T ss_pred -hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC-hHHHHhcc
Confidence 678778855 5889999999999 889888 89999999999999854 34455443
No 459
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=5.6e-13 Score=132.07 Aligned_cols=198 Identities=21% Similarity=0.305 Sum_probs=137.9
Q ss_pred HHHHhCCCCceeeEeeEEEeC-----CeEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 004400 464 GMISALQHPNLVKLYGCCIEG-----NQLLLIYEYLENNSLARALFE---HRLKLDWPTRRRICLGIARGLAYLHGESRI 535 (756)
Q Consensus 464 ~~l~~l~h~niv~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~ 535 (756)
.-|-.+.|.|||++..|+.+. .+..++.|||+.|++..+|++ ....+......+++.||..||.|||+. .|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 345566799999999998654 457999999999999999973 344677888899999999999999987 78
Q ss_pred CeEcCCCCCCceEecCCCCEEEccCCccccCccc----CcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHH
Q 004400 536 KVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE----NTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIV 611 (756)
Q Consensus 536 ~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell 611 (756)
+|+|+++.-+-|++..++-+||+----.. .... .......-.|-++|.|||+=.....+.++|||+||....||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 99999999999999999888874221111 1100 001112234678999999877777788999999999999998
Q ss_pred hCCCCCCccchhhHHHHHHHHHhcCc-cccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 004400 612 SGRSNVTKEDMFYLLDWALVLKEQGK-LMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVL 680 (756)
Q Consensus 612 tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~ 680 (756)
.+..--...+...... .... ......... -.+++..|++..|..||+|++++
T Consensus 277 ilEiq~tnseS~~~~e------e~ia~~i~~len~l-----------qr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVE------ENIANVIIGLENGL-----------QRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred HheeccCCCcceeehh------hhhhhheeeccCcc-----------ccCcCcccccCCCCCCcchhhhh
Confidence 8764321111111000 0000 000011111 23456789999999999999984
No 460
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.37 E-value=2.1e-12 Score=124.03 Aligned_cols=130 Identities=21% Similarity=0.164 Sum_probs=97.4
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceee-EeeEEEeCCeEEEEEEecCCCCHH
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVK-LYGCCIEGNQLLLIYEYLENNSLA 500 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~~lV~e~~~~gsL~ 500 (756)
+.++.|.++.||+++.. ++.|++|....... ....+.+|+.+++.+.+.++++ ++.+. ....++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 57889999999999865 77899999765432 2345678999999987655554 44433 33458999999998775
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 501 RALFEHRLKLDWPTRRRICLGIARGLAYLHGES--RIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 501 ~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g--~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
+. . .....++.+++++|+.||..+ ...++|||++|.||+++ ++.++++|||.+..
T Consensus 80 ~~------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 43 0 112345679999999999885 22369999999999999 66899999999863
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.35 E-value=9.9e-13 Score=144.56 Aligned_cols=184 Identities=28% Similarity=0.474 Sum_probs=117.1
Q ss_pred CcCcCCCcEEEeecCcccccCCcccCCCC-CCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCC
Q 004400 84 LANISTLVNLTVQYNQFSGELPEELGSLL-NLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKL 162 (756)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 162 (756)
+..++.++.|++.+|.++ .++...+.+. +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|
T Consensus 112 ~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L 188 (394)
T COG4886 112 LLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNL 188 (394)
T ss_pred hhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhh
Confidence 444566777777777776 5666666664 7777777777776 55555666777777777777777 555555566777
Q ss_pred cEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCc
Q 004400 163 EKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNR 242 (756)
Q Consensus 163 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 242 (756)
+.|++++|+++ .+|..+..+..|++|.+++|.+...........++..|.+.+|++. ..+..++.+++|+.|++++|.
T Consensus 189 ~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~ 266 (394)
T COG4886 189 NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQ 266 (394)
T ss_pred hheeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccchhccccccceecccccc
Confidence 77777777776 5666555555667776666654333333333334555556666666 335566777777777777777
Q ss_pred CCCCCCccCcCCCCCCeEEecCccccccCCch
Q 004400 243 LRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPW 274 (756)
Q Consensus 243 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 274 (756)
++ .++. +..+.+++.|++++|.+....|..
T Consensus 267 i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 267 IS-SISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred cc-cccc-ccccCccCEEeccCccccccchhh
Confidence 77 3333 677777777777777776555543
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=4e-12 Score=137.28 Aligned_cols=247 Identities=22% Similarity=0.248 Sum_probs=180.5
Q ss_pred CccccCcccC--CCCccEEEeec---cCCcEEEEEEccccCc--ccHHHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEE
Q 004400 417 NFATDNNIGE--GGFGPVYKGLL---ADGTAIAVKQLSSKSK--QGNREFINEIGMISAL-QHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 417 ~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 488 (756)
.|.....+|. |.+|.||.+.. .++..+|+|.-+.... .....=.+|+..-+.+ .|+|.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4567788999 99999999986 4678899988443221 2223335577766666 4999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH----HHHHHHcCCCCCeEcCCCCCCceEecCC-CCEEEccCCcc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIAR----GLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFGLA 563 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~g~~~iiH~Dikp~Nill~~~-~~~kl~DFGla 563 (756)
+-+|++. .+|..+.+.....++....+.+..+... |+.++|... ++|-|+||.||+..++ ...+++|||+.
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCccee
Confidence 9999986 6888887766666788888888888888 999999985 9999999999999999 88999999999
Q ss_pred ccCcccCcce----eeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccc
Q 004400 564 KLDEEENTHI----STRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLM 639 (756)
Q Consensus 564 ~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (756)
..+....... .....|...|++||... +-++.+.|+|++|.++.+...|.......-. -.|... +...+
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~---~~W~~~--r~~~i- 343 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN---SSWSQL--RQGYI- 343 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC---CCcccc--ccccC-
Confidence 8776544221 22336788899999764 5688899999999999999988765532200 012110 00000
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 004400 640 ELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLR 681 (756)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~ 681 (756)
. ..+.......+...+..+++.+|..|++...+..
T Consensus 344 --p-----~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 344 --P-----LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --c-----hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 1111111223455788899999999999888754
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=1.9e-12 Score=142.24 Aligned_cols=200 Identities=28% Similarity=0.394 Sum_probs=159.3
Q ss_pred ccccccCcccccCCcccCCCCCCCEEEccCCcccCccCcccccCC-cc-eeeccCccccccCCccCcCcCCCcEEEeecC
Q 004400 21 KRVLKEQNLTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLP-LL-NISLIANRLKGPIPKYLANISTLVNLTVQYN 98 (756)
Q Consensus 21 ~l~L~~~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L-~l~l~~n~~~~~~p~~l~~l~~L~~L~L~~N 98 (756)
.+.+..+.+... ...+..++.++.|++.+|.++ .+|.....++ .| .+++.+|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 466666666433 233556688999999999998 7777777774 66 4778888877 56667889999999999999
Q ss_pred cccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcCCCCc
Q 004400 99 QFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIPS 178 (756)
Q Consensus 99 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 178 (756)
+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|.+++|++. ..+..+.++.++..|.+.+|++. .++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 999 77777778899999999999999 77876666777999999999755 57778889999999999999987 4578
Q ss_pred cccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCcccc
Q 004400 179 GIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLG 228 (756)
Q Consensus 179 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~ 228 (756)
.+..+++|+.|++++|.+..... .....+++.|++++|.+....+....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccccccc-ccccCccCEEeccCccccccchhhhc
Confidence 88889999999999999888877 33334699999999999877665543
No 464
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.27 E-value=2.7e-11 Score=134.51 Aligned_cols=148 Identities=14% Similarity=0.180 Sum_probs=96.4
Q ss_pred hcCccccCcccCCCCccEEEeeccC-CcEEEEEEccccCccc----------------------------------H---
Q 004400 415 TNNFATDNNIGEGGFGPVYKGLLAD-GTAIAVKQLSSKSKQG----------------------------------N--- 456 (756)
Q Consensus 415 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~--- 456 (756)
...|+. +.||+|++|.||+|++.+ |+.||||+.+...... .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 346776 799999999999999877 9999999997531100 0
Q ss_pred ---HHHHHHHHHHHhCC----CCceeeEeeEEEe-CCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHH-HHHHH
Q 004400 457 ---REFINEIGMISALQ----HPNLVKLYGCCIE-GNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGI-ARGLA 527 (756)
Q Consensus 457 ---~~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~i-a~~L~ 527 (756)
-+|.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.+.-.-.....+... ++... ..-+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~---la~~~v~~~~~ 274 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKL---LAERGVEVFFT 274 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHH---HHHHHHHHHHH
Confidence 12445555544442 4444444444433 4567899999999999875321111222111 22111 11223
Q ss_pred HHHcCCCCCeEcCCCCCCceEecCCC----CEEEccCCccccCccc
Q 004400 528 YLHGESRIKVVHRDIKATNVLLDKDL----NSKISDFGLAKLDEEE 569 (756)
Q Consensus 528 ~LH~~g~~~iiH~Dikp~Nill~~~~----~~kl~DFGla~~~~~~ 569 (756)
.++..| ++|+|+||.||+++.++ ++++.|||++....+.
T Consensus 275 Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 275 QVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 334455 99999999999999988 8999999999866543
No 465
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.26 E-value=7.1e-11 Score=128.69 Aligned_cols=228 Identities=18% Similarity=0.177 Sum_probs=151.7
Q ss_pred ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHH
Q 004400 437 LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRR 516 (756)
Q Consensus 437 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~ 516 (756)
..++.+|.|...+...........+-++.|+.++||||+++++.+..++..|+|+|-+.- |..++.+. +.....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~l----~~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKEL----GKEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHHh----HHHHHH
Confidence 557888999888766553345567788899999999999999999999999999999854 56666533 245556
Q ss_pred HHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcceeeccccCccCCchHhhhcCCCCc
Q 004400 517 RICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGHLTE 596 (756)
Q Consensus 517 ~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 596 (756)
--+.||+.||.+||+.| +++|++|.-+.|++++.|..||++|-++........ ......---.|..|+.+.... -
T Consensus 108 ~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~--~ 182 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE--W 182 (690)
T ss_pred HHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--c
Confidence 67889999999999887 799999999999999999999999988764332221 001111122466777553322 3
Q ss_pred ccchhhHHHHHHHHHhCCCCCCcc--chhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCC
Q 004400 597 KADVYSFGIVALEIVSGRSNVTKE--DMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRP 674 (756)
Q Consensus 597 ~~Dv~slGv~l~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RP 674 (756)
..|.|-||++++|++.|..+-..+ ....+.. .......++. .... ..... ..+++..|....+-.|-
T Consensus 183 s~D~~~Lg~li~el~ng~~~~~~~~~~~~~ipk-~~~~~~~k~~----~~~~-----~~r~n-~~~~~~~~~~~~gff~n 251 (690)
T KOG1243|consen 183 SIDSWGLGCLIEELFNGSLLTKTDLSNTGKIPK-ALIELYCKKL----GATE-----LKRPN-KLRFILECRLLGGFFRN 251 (690)
T ss_pred chhhhhHHHHHHHHhCcccCcchhhhccCccch-hHHHHHHHHh----cccc-----ccccc-hhhHHHHHHhccccccc
Confidence 479999999999999983222110 0000000 0000000000 0000 00011 45667778888888888
Q ss_pred CHHHHHHHhccC
Q 004400 675 SMSSVLRMLECG 686 (756)
Q Consensus 675 t~~ev~~~L~~~ 686 (756)
.+-+++..|+.+
T Consensus 252 ~fvd~~~fLeel 263 (690)
T KOG1243|consen 252 DFVDTLLFLEEL 263 (690)
T ss_pred hHHHHHHHHHhc
Confidence 888888888754
No 466
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.23 E-value=1.1e-10 Score=112.72 Aligned_cols=136 Identities=14% Similarity=0.135 Sum_probs=98.5
Q ss_pred CcccCCCCccEEEeeccC-------CcEEEEEEccccC------------c----------ccHHHHH----HHHHHHHh
Q 004400 422 NNIGEGGFGPVYKGLLAD-------GTAIAVKQLSSKS------------K----------QGNREFI----NEIGMISA 468 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~~~----~E~~~l~~ 468 (756)
..||.|--+.||.|...+ +..+|||+.+... . ...+.+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 478999999999998543 5799999875320 0 0112223 79999998
Q ss_pred CCC--CceeeEeeEEEeCCeEEEEEEecCCCCHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCeEcCCCCC
Q 004400 469 LQH--PNLVKLYGCCIEGNQLLLIYEYLENNSLAR-ALFEHRLKLDWPTRRRICLGIARGLAYL-HGESRIKVVHRDIKA 544 (756)
Q Consensus 469 l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~g~~~iiH~Dikp 544 (756)
+.. -++.+++++ ...++||||+.++.+.. .+.. ..++..+...+..+++.+|.+| |..| |||||+++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCH
Confidence 853 355566654 56789999998754422 2221 2345556778889999999999 7775 99999999
Q ss_pred CceEecCCCCEEEccCCccccCc
Q 004400 545 TNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 545 ~Nill~~~~~~kl~DFGla~~~~ 567 (756)
.||++++ +.++|+|||.+....
T Consensus 154 ~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEEC-CcEEEEECCCceeCC
Confidence 9999974 679999999987543
No 467
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=1.4e-10 Score=107.43 Aligned_cols=131 Identities=21% Similarity=0.278 Sum_probs=102.1
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEccccCc--------ccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEEEe
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK--------QGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEY 493 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 493 (756)
..+++|+-+.+|.+.+.+.. +++|.-..+.. -...+-.+|+.++++++--.|.-.+-+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46889999999999875434 56665333211 1123457799999998766666666677788889999999
Q ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 494 LENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 494 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
++|..|.+.+... ...++..+-.-+.-||..| |||+|+.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888654 2567777888889999997 99999999999998764 99999999974
No 468
>PLN03150 hypothetical protein; Provisional
Probab=99.17 E-value=4e-11 Score=138.02 Aligned_cols=93 Identities=25% Similarity=0.512 Sum_probs=73.2
Q ss_pred CcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccC
Q 004400 90 LVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQP 169 (756)
Q Consensus 90 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 169 (756)
++.|+|++|.+.|.+|..|+.|++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 67778888888777777788888888888888888777777777788888888888888777777777888888888888
Q ss_pred CcCcCCCCccccC
Q 004400 170 SGLAGPIPSGIFS 182 (756)
Q Consensus 170 N~l~~~~p~~~~~ 182 (756)
|+++|.+|..+..
T Consensus 500 N~l~g~iP~~l~~ 512 (623)
T PLN03150 500 NSLSGRVPAALGG 512 (623)
T ss_pred CcccccCChHHhh
Confidence 8887777776654
No 469
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.16 E-value=9.2e-13 Score=132.01 Aligned_cols=166 Identities=22% Similarity=0.218 Sum_probs=111.5
Q ss_pred cccCCCCCCCEEEccCCcccCc----cCcccccCCcceeeccC----ccccccCCc-------cCcCcCCCcEEEeecCc
Q 004400 35 PKLAELTFLQDIDLTLNYLSGT----IPSQWASLPLLNISLIA----NRLKGPIPK-------YLANISTLVNLTVQYNQ 99 (756)
Q Consensus 35 ~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~l~l~~----n~~~~~~p~-------~l~~l~~L~~L~L~~N~ 99 (756)
+.+..+..++.|+|++|.+... +...+.+.+.|+.-..+ .+....+|. ++...++|+.||||+|-
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 4456677788888888877522 33345555666432222 233334444 34456799999999999
Q ss_pred ccccCCcc----cCCCCCCcEEeccCCeecccCCc-------------cccCCCCCCEEEeeCCcccccC----ChhhcC
Q 004400 100 FSGELPEE----LGSLLNLEKLHLSSNNFTGELPK-------------TFAKLTNMKDFRISDNQFTGQI----PSFIQN 158 (756)
Q Consensus 100 l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~-------------~~~~l~~L~~L~L~~N~l~~~~----p~~~~~ 158 (756)
|.-..+.. +.++..|++|+|.+|.+.-.-.. ..+.-+.|+++..++|++.... ...|..
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~ 183 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQS 183 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHh
Confidence 87655554 45678899999999998721111 1234568999999999987433 345667
Q ss_pred cCCCcEEEccCCcCcCC----CCccccCCCCCCeEEccCCCCCCCC
Q 004400 159 WTKLEKLFIQPSGLAGP----IPSGIFSLENLTDLRISDLNGPEAT 200 (756)
Q Consensus 159 l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~~~~~~ 200 (756)
.+.|+.+.+..|.+... +..++..+++|+.|||.+|.++...
T Consensus 184 ~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~eg 229 (382)
T KOG1909|consen 184 HPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEG 229 (382)
T ss_pred ccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHH
Confidence 78899999999988632 3345677888888888887776544
No 470
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=4.4e-11 Score=129.35 Aligned_cols=246 Identities=21% Similarity=0.158 Sum_probs=175.5
Q ss_pred hhcCccccCcccCCCCccEEEeec--cCCcEEEEEEccccCcccH--HHHHHHHHHHHhC-CCCceeeEeeEEEeCCeEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGLL--ADGTAIAVKQLSSKSKQGN--REFINEIGMISAL-QHPNLVKLYGCCIEGNQLL 488 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 488 (756)
.+.+|.....||.|.|+.||+... .++..|++|.+........ ..-..|+.+...+ .|.+++..+..+..-+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 346788999999999999999873 4678899998876533322 2235577776666 5899999888888888888
Q ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCC-CCEEEccCCccccCc
Q 004400 489 LIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKD-LNSKISDFGLAKLDE 567 (756)
Q Consensus 489 lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~-~~~kl~DFGla~~~~ 567 (756)
+--|||+++++...+ .....++...++++..|++.++.++|+.. ++|+|+||+||++..+ +.-+++|||.+....
T Consensus 343 ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred CchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccccc
Confidence 999999999987776 33446788889999999999999999885 9999999999999886 778999999986422
Q ss_pred ccCcceeeccccCccCC--chHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCccchhhHHHHHHHHHhcCccccccccC
Q 004400 568 EENTHISTRVAGTIGYM--APEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTKEDMFYLLDWALVLKEQGKLMELVDTN 645 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
.. .....++-+++ +++......+..+.|+||||.-+.|.++|..--..... |.. +..-.-+.
T Consensus 419 ~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-----~~~-------i~~~~~p~ 482 (524)
T KOG0601|consen 419 FS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-----SLT-------IRSGDTPN 482 (524)
T ss_pred ee----cccccccccccccchhhccccccccccccccccccccccccCcccCccccc-----cee-------eecccccC
Confidence 11 11122333444 45555556788999999999999999988653222111 110 00000000
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHhc
Q 004400 646 PGSNFDKEQVMVMINVALLCANASPTIRPSMSSVLRMLE 684 (756)
Q Consensus 646 ~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ev~~~L~ 684 (756)
.+. ....+..+.+.+...++..||.+.++....+
T Consensus 483 ----~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 483 ----LPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred ----CCc-hHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 011 1134666777888999999999988766544
No 471
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.14 E-value=2e-10 Score=115.43 Aligned_cols=142 Identities=21% Similarity=0.297 Sum_probs=110.5
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEccccCc-ccHHHHHHHHHHHHhCCCC--ceeeEeeEEEeC---CeEEEEEEecC
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSK-QGNREFINEIGMISALQHP--NLVKLYGCCIEG---NQLLLIYEYLE 495 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lV~e~~~ 495 (756)
+.|+.|..+.||+++..+|+.+++|....... .....+.+|+++++.+++. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999999765322 1345788999999999764 456677776654 36689999999
Q ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC------------------------------------------
Q 004400 496 NNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGES------------------------------------------ 533 (756)
Q Consensus 496 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g------------------------------------------ 533 (756)
|.++.+.+.. ..++...+..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9888665421 24677788888999999999998531
Q ss_pred -----------CCCeEcCCCCCCceEecC--CCCEEEccCCcccc
Q 004400 534 -----------RIKVVHRDIKATNVLLDK--DLNSKISDFGLAKL 565 (756)
Q Consensus 534 -----------~~~iiH~Dikp~Nill~~--~~~~kl~DFGla~~ 565 (756)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 234799999999999998 56689999998864
No 472
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.14 E-value=3.3e-10 Score=104.35 Aligned_cols=142 Identities=18% Similarity=0.265 Sum_probs=107.2
Q ss_pred ccCcccCCCCccEEEeeccCCcEEEEEEc-ccc-------CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEEEE
Q 004400 420 TDNNIGEGGFGPVYKGLLADGTAIAVKQL-SSK-------SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 420 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 491 (756)
....+-||+-+.|+++.+. |+...||.- .+. .+-..++..+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5578899999999999886 566666643 222 1123356788999999987656655555677777888999
Q ss_pred EecCC-CCHHHHHHhcCCCCCHHHH-HHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC---EEEccCCcccc
Q 004400 492 EYLEN-NSLARALFEHRLKLDWPTR-RRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN---SKISDFGLAKL 565 (756)
Q Consensus 492 e~~~~-gsL~~~l~~~~~~l~~~~~-~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~---~kl~DFGla~~ 565 (756)
||++| .++.+++......-..... ..++..|-+.+.-||..+ |||+||..+||++..++. +.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 4778888754433333333 788999999999999986 999999999999976554 58999999864
No 473
>PLN03150 hypothetical protein; Provisional
Probab=99.14 E-value=6.8e-11 Score=136.15 Aligned_cols=106 Identities=25% Similarity=0.490 Sum_probs=97.9
Q ss_pred eeeccCccccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCc
Q 004400 68 NISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQ 147 (756)
Q Consensus 68 ~l~l~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 147 (756)
.|+|.+|++.+.+|..|.++++|+.|+|++|.|+|.+|..++.+++|+.|+|++|+|+|.+|..++++++|+.|+|++|+
T Consensus 422 ~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~ 501 (623)
T PLN03150 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501 (623)
T ss_pred EEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhcCc-CCCcEEEccCCcCc
Q 004400 148 FTGQIPSFIQNW-TKLEKLFIQPSGLA 173 (756)
Q Consensus 148 l~~~~p~~~~~l-~~L~~L~l~~N~l~ 173 (756)
++|.+|..+..+ .++..+++.+|...
T Consensus 502 l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 502 LSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred ccccCChHHhhccccCceEEecCCccc
Confidence 999999998764 46677888877654
No 474
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.10 E-value=1.6e-09 Score=114.55 Aligned_cols=168 Identities=20% Similarity=0.308 Sum_probs=130.7
Q ss_pred CCccEEEee-ccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCceeeEeeEEEe----CCeEEEEEEecCC-CCHHH
Q 004400 428 GFGPVYKGL-LADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIE----GNQLLLIYEYLEN-NSLAR 501 (756)
Q Consensus 428 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~~~~-gsL~~ 501 (756)
--.+.|++. ..||..|+.|+++.........-..-+++++++.|+|||++.++|.. +..+++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346789998 66899999999965433322223446789999999999999999873 4568999999986 57776
Q ss_pred HHHh--------------cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCc
Q 004400 502 ALFE--------------HRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDE 567 (756)
Q Consensus 502 ~l~~--------------~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~ 567 (756)
.-.. ...+.++...+.++.|++.||.++|+.| ...+-+.+.+|+++.+.+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeec
Confidence 5542 1235778999999999999999999998 8889999999999999999999999887665
Q ss_pred ccCcceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCC
Q 004400 568 EENTHISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSN 616 (756)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p 616 (756)
++.... -| --.+-|.-.||.+++.|.||...
T Consensus 445 ~d~~~~------------le------~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 445 EDPTEP------------LE------SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCCcc------------hh------HHhhhhHHHHHHHHHHHhhcccc
Confidence 543110 01 12356888999999999999643
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.09 E-value=1.8e-11 Score=119.78 Aligned_cols=128 Identities=21% Similarity=0.288 Sum_probs=65.2
Q ss_pred CCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEcc
Q 004400 89 TLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQ 168 (756)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 168 (756)
.|++||||+|.|+ .+..+..-++.++.|++|+|+|. .+.. ++.|++|+.||||+|.++ .+-.+-.++.+.+.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 4555555555555 44444444555555555555554 2222 445555555555555555 333333344444444444
Q ss_pred CCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCC-C
Q 004400 169 PSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQ-I 247 (756)
Q Consensus 169 ~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~ 247 (756)
+|.+. .. ..++++-+|..||+++|+|... .
T Consensus 361 ~N~iE-----------------------------------------------~L--SGL~KLYSLvnLDl~~N~Ie~lde 391 (490)
T KOG1259|consen 361 QNKIE-----------------------------------------------TL--SGLRKLYSLVNLDLSSNQIEELDE 391 (490)
T ss_pred hhhHh-----------------------------------------------hh--hhhHhhhhheeccccccchhhHHH
Confidence 44443 11 1245555666666666666532 1
Q ss_pred CccCcCCCCCCeEEecCccccc
Q 004400 248 PSNFDDLYDVDYIYFAGNLLTG 269 (756)
Q Consensus 248 p~~~~~l~~L~~L~ls~N~l~~ 269 (756)
...++++|-|+.+.|.+|++.+
T Consensus 392 V~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 392 VNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hcccccccHHHHHhhcCCCccc
Confidence 2346666667777777777763
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=2.4e-11 Score=125.16 Aligned_cols=116 Identities=20% Similarity=0.296 Sum_probs=57.3
Q ss_pred cCcCcCCCcEEEeecCcccccCC--cccCCCCCCcEEeccCCeecccCCcc-ccCCCCCCEEEeeCCccccc-CChhhcC
Q 004400 83 YLANISTLVNLTVQYNQFSGELP--EELGSLLNLEKLHLSSNNFTGELPKT-FAKLTNMKDFRISDNQFTGQ-IPSFIQN 158 (756)
Q Consensus 83 ~l~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~-~p~~~~~ 158 (756)
....+++++.|||+.|-|....+ .-...|++|+.|+|+.|++....... -..++.|+.|.|+.|.|+-. +-.....
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~ 220 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLT 220 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHh
Confidence 45556666666666665553221 22345666666666666665222111 11345666666666666521 1222334
Q ss_pred cCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCC
Q 004400 159 WTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPE 198 (756)
Q Consensus 159 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 198 (756)
+++|+.|+|..|...+.-.....-++.|+.|||++|++..
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~ 260 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID 260 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc
Confidence 5666666666664222222222234455555555554444
No 477
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.06 E-value=2.4e-11 Score=118.93 Aligned_cols=212 Identities=15% Similarity=0.139 Sum_probs=124.3
Q ss_pred ccccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCc-ccccC
Q 004400 74 NRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQ-FTGQI 152 (756)
Q Consensus 74 n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~ 152 (756)
|-+...+|..+.-+++|..+.++++.-. .+.+-...-+.|+++...+.-++ ..|. +-....+..+.-+.-. .+|..
T Consensus 200 ni~~~~l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~~~~D~~~~E~~t~~G~~ 276 (490)
T KOG1259|consen 200 NIIPNRLSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQ-DVPS-LLPETILADPSGSEPSTSNGSA 276 (490)
T ss_pred cccccccccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccc-cccc-ccchhhhcCccCCCCCccCCce
Confidence 3334445555666677777777777544 33343344566777777665544 2221 1111111111111110 11222
Q ss_pred ChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccCCCC
Q 004400 153 PSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGKMTK 232 (756)
Q Consensus 153 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~ 232 (756)
-..+--...|++|+|++|.++ .+..+.--++.++.|++|+|.+..... .-...+|+.|+|++|.++ .+..+-.++-+
T Consensus 277 ~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 277 LVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 222223345666666666665 444455556666666666666665544 112225777888888888 55566678899
Q ss_pred CcEEEccCCcCCCCCCccCcCCCCCCeEEecCcccccc--CCc-hhhcCCCeeEeecCCCCCCC
Q 004400 233 LKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGA--IPP-WMLERGDKIDLSYNNFTDGS 293 (756)
Q Consensus 233 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p~-~~~~~l~~l~ls~N~l~~~~ 293 (756)
++.|.|+.|.|.. + +.+.++-+|.+||+++|++... +-. .-++.++.+.+.+|++.+..
T Consensus 354 IKtL~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 354 IKTLKLAQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred EeeeehhhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 9999999999872 2 2477888999999999998611 000 11566788889999998754
No 478
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.05 E-value=1.1e-10 Score=132.41 Aligned_cols=249 Identities=18% Similarity=0.206 Sum_probs=174.2
Q ss_pred hhcCccccCcccCCCCccEEEee-ccCCcEEEEEEcccc---CcccHHHHHHHHHHHHhCCCCceeeEeeEEEeCCeEEE
Q 004400 414 ATNNFATDNNIGEGGFGPVYKGL-LADGTAIAVKQLSSK---SKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLL 489 (756)
Q Consensus 414 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 489 (756)
..+.|.+.+-+-+|+++.++.+. -..|...++|..... .....+...++-.++-..+||.++.....+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 44667777888899999999887 334444444444322 12222333444444444566777776666666778899
Q ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCccc
Q 004400 490 IYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEE 569 (756)
Q Consensus 490 V~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~ 569 (756)
|++|..+++|...++... ..+..-.......+..+++|||.. .+.|||++|.|++...++..+++|||......-.
T Consensus 882 ~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccc
Confidence 999999999999998655 455555566677788999999987 3899999999999999999999999843311100
Q ss_pred ------------------------Cc------ceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCCCc
Q 004400 570 ------------------------NT------HISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNVTK 619 (756)
Q Consensus 570 ------------------------~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~ 619 (756)
.. .......||+.|.+||...+......+|.|+.|+.++|.++|..||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 00 012235799999999999999999999999999999999999999977
Q ss_pred cchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 004400 620 EDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASPTIRPSMS 677 (756)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P~~RPt~~ 677 (756)
......++ ..-...+. +...+.+......+++...+..+|.+|-.+.
T Consensus 1038 ~tpq~~f~-------ni~~~~~~----~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQIFE-------NILNRDIP----WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhhhh-------ccccCCCC----CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 66544332 11111111 1112223334467777788899999998877
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=1.2e-10 Score=110.02 Aligned_cols=104 Identities=22% Similarity=0.298 Sum_probs=43.4
Q ss_pred CcCCCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccc-cCCCCCCEEEeeCCcccccC-ChhhcCcCCCc
Q 004400 86 NISTLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTF-AKLTNMKDFRISDNQFTGQI-PSFIQNWTKLE 163 (756)
Q Consensus 86 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~ 163 (756)
.+.+|+.|+|++|.|+ .+. .+..+++|+.|+|++|+|+ .+...+ ..+++|++|+|++|+|...- -..+..+++|+
T Consensus 40 ~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~ 116 (175)
T PF14580_consen 40 TLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLR 116 (175)
T ss_dssp T-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--
T ss_pred hhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcc
Confidence 4567777778887777 343 4667777888888888877 444444 35777888888888776321 14556677788
Q ss_pred EEEccCCcCcCCC---CccccCCCCCCeEEcc
Q 004400 164 KLFIQPSGLAGPI---PSGIFSLENLTDLRIS 192 (756)
Q Consensus 164 ~L~l~~N~l~~~~---p~~~~~l~~L~~L~l~ 192 (756)
.|+|.+|.++... ...+..+|+|+.||-.
T Consensus 117 ~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 117 VLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred eeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 8888888776331 1235567777777644
No 480
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=4.5e-11 Score=123.18 Aligned_cols=205 Identities=19% Similarity=0.235 Sum_probs=144.4
Q ss_pred cCcCCCcEEEeecCcccccCC--cccCCCCCCcEEeccCCeecccCC--ccccCCCCCCEEEeeCCcccccCChhh-cCc
Q 004400 85 ANISTLVNLTVQYNQFSGELP--EELGSLLNLEKLHLSSNNFTGELP--KTFAKLTNMKDFRISDNQFTGQIPSFI-QNW 159 (756)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l 159 (756)
+++.+|++..|.+..+. ..+ .....|++++.|||++|-|....+ .....|++|+.|+|+.|++........ ..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 35678999999999887 444 356789999999999999884332 334568999999999999884433322 356
Q ss_pred CCCcEEEccCCcCcCC-CCccccCCCCCCeEEccCCCCCCCCccccccc-cccEEEcccccccCCC-CccccCCCCCcEE
Q 004400 160 TKLEKLFIQPSGLAGP-IPSGIFSLENLTDLRISDLNGPEATFPQLGNM-KMTKLILRNCNITGEL-PRYLGKMTKLKVL 236 (756)
Q Consensus 160 ~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~-~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L 236 (756)
++|+.|.|+.|.|+.. +......+++|+.|+++.|............+ .|+.|+|++|++-... -...+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 8899999999999732 33445568999999999986333333333333 4899999999987332 1346788999999
Q ss_pred EccCCcCCCC-CCcc-----CcCCCCCCeEEecCccccccCCc----hhhcCCCeeEeecCCCCC
Q 004400 237 DLSFNRLRGQ-IPSN-----FDDLYDVDYIYFAGNLLTGAIPP----WMLERGDKIDLSYNNFTD 291 (756)
Q Consensus 237 ~Ls~N~l~~~-~p~~-----~~~l~~L~~L~ls~N~l~~~~p~----~~~~~l~~l~ls~N~l~~ 291 (756)
+++.|.+... +|+. ...+++|++|+++.|++. ..+. ..+++++.+.+..|.++-
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhhcccccccc
Confidence 9999988743 3333 456788999999999885 2221 115566666666666653
No 481
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.00 E-value=5e-11 Score=131.36 Aligned_cols=218 Identities=23% Similarity=0.306 Sum_probs=127.9
Q ss_pred CCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcEE
Q 004400 39 ELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKL 117 (756)
Q Consensus 39 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 117 (756)
.+..+..+.+..|.|.. +-..+..++.|+ +++..|++.. +...+..+++|+.|+|++|.|+.+.+ +..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhhh
Confidence 34445555555555552 222334444442 4444444442 22226667788888888888874333 6667778888
Q ss_pred eccCCeecccCCccccCCCCCCEEEeeCCcccccCChh-hcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCC
Q 004400 118 HLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSF-IQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNG 196 (756)
Q Consensus 118 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 196 (756)
++++|.|+ .+. .+..+++|+.+++++|+++...+ . ...+.+|+.+++.+|.+. ....+..+..+..+++.+|.+
T Consensus 146 ~l~~N~i~-~~~-~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLIS-DIS-GLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcch-hcc-CCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccc
Confidence 88888877 232 35557788888888888773333 2 466777778888888776 233334444555556666666
Q ss_pred CCCCccccccc-cccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCCCCccCcCCCCCCeEEecCcccc
Q 004400 197 PEATFPQLGNM-KMTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLT 268 (756)
Q Consensus 197 ~~~~~~~~~~~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 268 (756)
........... .|+.+++++|.+. ..+..+..+..+..|++++|++...- .+...+.+..+.+..|.+.
T Consensus 221 ~~~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 221 SKLEGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred eeccCcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccccchHHHhccCcchhc
Confidence 65443222111 3666777777776 33345566777777777777766322 2444555666666666654
No 482
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=2.1e-08 Score=103.48 Aligned_cols=258 Identities=14% Similarity=0.168 Sum_probs=156.4
Q ss_pred ccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhC-CCCceeeEeeEE-------EeCCeEEEEE
Q 004400 420 TDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISAL-QHPNLVKLYGCC-------IEGNQLLLIY 491 (756)
Q Consensus 420 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~-------~~~~~~~lV~ 491 (756)
..+.||+|+-+.+|-.- .-+..+.|+++....-.. .+.++.|.+. .||-+-.-+.+= ..+....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 45789999999999532 112234566655433222 2234445444 566443312110 1223377888
Q ss_pred EecCCCCHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCcccc
Q 004400 492 EYLENNSLARALF------EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 492 e~~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~ 565 (756)
..+++..=...+. ++....+|....+++..+|.+.+.||+.| .+-+|+.++|+|+.+++.+.+.|=..-.+
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 8887753222222 23345799999999999999999999998 88999999999999999999988655443
Q ss_pred CcccCcceeeccccCccCCchHhhh-----cCCCCcccchhhHHHHHHHHHhC-CCCCCccchh----hHH--HHHH-HH
Q 004400 566 DEEENTHISTRVAGTIGYMAPEYAM-----RGHLTEKADVYSFGIVALEIVSG-RSNVTKEDMF----YLL--DWAL-VL 632 (756)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg-~~p~~~~~~~----~~~--~~~~-~~ 632 (756)
..+.. ....-+|...|.+||... +...+...|-|.+||++++++.| +.||.+-... ... +-+. .+
T Consensus 167 ~~ng~--~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f 244 (637)
T COG4248 167 NANGT--LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF 244 (637)
T ss_pred ccCCc--eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee
Confidence 32221 222346888999999865 23467789999999999999986 8998432110 000 0000 00
Q ss_pred HhcCccccccccCCCCCCCHH-HHHHHHHHHHHhhcC--CCCCCCCHHHHHHHhccCcc
Q 004400 633 KEQGKLMELVDTNPGSNFDKE-QVMVMINVALLCANA--SPTIRPSMSSVLRMLECGVD 688 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~c~~~--~P~~RPt~~ev~~~L~~~~~ 688 (756)
....+...-..+.+ ..++-. ....+..+..+|+.. .+.-||+++.-+..|.+..+
T Consensus 245 ~ya~~~~~g~~p~P-~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 245 AYASDQRRGLKPPP-RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred eechhccCCCCCCC-CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 00000000001111 111111 223466777788865 36789999988777665443
No 483
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.95 E-value=6.2e-10 Score=105.29 Aligned_cols=106 Identities=28% Similarity=0.398 Sum_probs=34.7
Q ss_pred CcCcCCCcEEEeecCcccccCCcccC-CCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhh-cCcCC
Q 004400 84 LANISTLVNLTVQYNQFSGELPEELG-SLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFI-QNWTK 161 (756)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~ 161 (756)
+.+..++++|+|.+|.|+ .+ ..++ .+.+|+.|+|++|+|+ .+. .+..+++|++|++++|+|+ .+...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 445567899999999998 45 3466 5889999999999998 444 4888999999999999999 454444 46899
Q ss_pred CcEEEccCCcCcCCC-CccccCCCCCCeEEccCC
Q 004400 162 LEKLFIQPSGLAGPI-PSGIFSLENLTDLRISDL 194 (756)
Q Consensus 162 L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~n 194 (756)
|++|+|++|+|...- -..+..+++|+.|++.+|
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~N 123 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGN 123 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCC
Confidence 999999999997421 133444555555554443
No 484
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.90 E-value=5e-11 Score=119.73 Aligned_cols=236 Identities=17% Similarity=0.215 Sum_probs=165.0
Q ss_pred ccceeccccccccCcccc----cCCcccCCCCCCCEEEccCCcc---cCccCcc-------cccCCcc-eeeccCccccc
Q 004400 14 KQKTVNQKRVLKEQNLTG----VLPPKLAELTFLQDIDLTLNYL---SGTIPSQ-------WASLPLL-NISLIANRLKG 78 (756)
Q Consensus 14 ~~~~~~~~l~L~~~~l~~----~~p~~l~~l~~L~~L~L~~n~l---~~~~p~~-------~~~l~~L-~l~l~~n~~~~ 78 (756)
-.+.++.+++|++|-+.. .+.+.+.+.++|+..++++-.. ...+|.. +...+.| .++|+.|-+..
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~ 106 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP 106 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc
Confidence 345788899999998874 4556778888999999987432 2234443 2333455 58999998886
Q ss_pred cCCcc----CcCcCCCcEEEeecCcccccCC-------------cccCCCCCCcEEeccCCeeccc----CCccccCCCC
Q 004400 79 PIPKY----LANISTLVNLTVQYNQFSGELP-------------EELGSLLNLEKLHLSSNNFTGE----LPKTFAKLTN 137 (756)
Q Consensus 79 ~~p~~----l~~l~~L~~L~L~~N~l~~~~p-------------~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~ 137 (756)
..+.. +..++.|++|+|.+|.+.-.-- ...++-++|+.+...+|++... +...|...+.
T Consensus 107 ~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~ 186 (382)
T KOG1909|consen 107 KGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPT 186 (382)
T ss_pred cchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccc
Confidence 65553 4567899999999998862111 1234557899999999999732 2334667789
Q ss_pred CCEEEeeCCcccc----cCChhhcCcCCCcEEEccCCcCcCC----CCccccCCCCCCeEEccCCCCCCCCccccccccc
Q 004400 138 MKDFRISDNQFTG----QIPSFIQNWTKLEKLFIQPSGLAGP----IPSGIFSLENLTDLRISDLNGPEATFPQLGNMKM 209 (756)
Q Consensus 138 L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L 209 (756)
|+.+.++.|.|.. .+...|..+++|+.|+|..|-++.. +...+..+++|+.|++++|.+.......+..
T Consensus 187 leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~--- 263 (382)
T KOG1909|consen 187 LEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVD--- 263 (382)
T ss_pred cceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHH---
Confidence 9999999999872 2345778999999999999999743 4566777888999888887776654433211
Q ss_pred cEEEcccccccCCCCccc-cCCCCCcEEEccCCcCCC----CCCccCcCCCCCCeEEecCcccc
Q 004400 210 TKLILRNCNITGELPRYL-GKMTKLKVLDLSFNRLRG----QIPSNFDDLYDVDYIYFAGNLLT 268 (756)
Q Consensus 210 ~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~ 268 (756)
.| ...++|+.|.+.+|.++. .+..++...+.|..|+|++|.+.
T Consensus 264 ----------------al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 264 ----------------ALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ----------------HHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 11 225667777777777662 23334455677777777777773
No 485
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.89 E-value=2e-08 Score=102.63 Aligned_cols=139 Identities=18% Similarity=0.077 Sum_probs=100.4
Q ss_pred cccCCCCccEEEeeccCCcEEEEEEccccCc-----------ccHHHHHHHHHHHHhCCCCce--eeEeeEEEe-----C
Q 004400 423 NIGEGGFGPVYKGLLADGTAIAVKQLSSKSK-----------QGNREFINEIGMISALQHPNL--VKLYGCCIE-----G 484 (756)
Q Consensus 423 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~-----~ 484 (756)
.+-+.....|++..+ +|+.|.||....... .....+.+|...+.++...+| .+++++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 334444445777665 577899997754321 111247889998888854333 344555543 2
Q ss_pred CeEEEEEEecCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecC-------CCCE
Q 004400 485 NQLLLIYEYLENN-SLARALFEH-RLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDK-------DLNS 555 (756)
Q Consensus 485 ~~~~lV~e~~~~g-sL~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~-------~~~~ 555 (756)
...++|+|++++. +|.+++... ....+...+..++.+++..+.-||..| |+|+|++++|||++. ++.+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceE
Confidence 3578999999986 899887532 234566778899999999999999997 999999999999985 4679
Q ss_pred EEccCCcccc
Q 004400 556 KISDFGLAKL 565 (756)
Q Consensus 556 kl~DFGla~~ 565 (756)
.++||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998863
No 486
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.88 E-value=1.4e-10 Score=127.73 Aligned_cols=238 Identities=23% Similarity=0.240 Sum_probs=153.5
Q ss_pred CCCCEEEccCCcccCccCcccccCCcc-eeeccCccccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcEEec
Q 004400 41 TFLQDIDLTLNYLSGTIPSQWASLPLL-NISLIANRLKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEKLHL 119 (756)
Q Consensus 41 ~~L~~L~L~~n~l~~~~p~~~~~l~~L-~l~l~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 119 (756)
+.++.++..++.+...--. ...+..+ .+.+..|.+.. +-..+..+++|..|+|.+|+|. .+...+..+++|++|+|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheec
Confidence 3445555555544311111 1233333 24456666553 4455778888999999999988 44444778889999999
Q ss_pred cCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCcCCCC-ccccCCCCCCeEEccCCCCCC
Q 004400 120 SSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLAGPIP-SGIFSLENLTDLRISDLNGPE 198 (756)
Q Consensus 120 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~n~~~~ 198 (756)
++|+|+...+ +..++.|+.|++++|.|+ .+. .+..++.|+.+++++|++...-+ . ...+.+|+.+++.+|.+..
T Consensus 126 s~N~I~~i~~--l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 126 SFNKITKLEG--LSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred cccccccccc--hhhccchhhheeccCcch-hcc-CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 9999884443 667778999999999988 333 45668888889999998884333 2 4677888888888887776
Q ss_pred CCccccccccccEEEcccccccCCCCccccCCCC--CcEEEccCCcCCCCCCccCcCCCCCCeEEecCccccccCCchhh
Q 004400 199 ATFPQLGNMKMTKLILRNCNITGELPRYLGKMTK--LKVLDLSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGAIPPWML 276 (756)
Q Consensus 199 ~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 276 (756)
....... ..+..+.+..|.++..-+ +..+.. |+.+++++|.+. .++..+..++.+..+++++|.+.........
T Consensus 201 i~~~~~~-~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~~~~~ 276 (414)
T KOG0531|consen 201 IEGLDLL-KKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEGLERL 276 (414)
T ss_pred ccchHHH-HHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccccccc
Confidence 5432211 123344777777774332 223333 788888888887 4446677778888888888887754444444
Q ss_pred cCCCeeEeecCCCC
Q 004400 277 ERGDKIDLSYNNFT 290 (756)
Q Consensus 277 ~~l~~l~ls~N~l~ 290 (756)
..+..+....|.+.
T Consensus 277 ~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 277 PKLSELWLNDNKLA 290 (414)
T ss_pred chHHHhccCcchhc
Confidence 44445555555544
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.88 E-value=8.3e-09 Score=99.31 Aligned_cols=125 Identities=24% Similarity=0.313 Sum_probs=82.9
Q ss_pred cEEEeeccCCcEEEEEEcccc---------------C------ccc-----HHHHHHHHHHHHhCCCC--ceeeEeeEEE
Q 004400 431 PVYKGLLADGTAIAVKQLSSK---------------S------KQG-----NREFINEIGMISALQHP--NLVKLYGCCI 482 (756)
Q Consensus 431 ~Vy~~~~~~~~~vavK~~~~~---------------~------~~~-----~~~~~~E~~~l~~l~h~--niv~l~~~~~ 482 (756)
.||.|...+|..+|||+.+.. . ... .....+|.+.|.++..- ++.+++++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999989999999987532 0 000 13456799999999766 455665442
Q ss_pred eCCeEEEEEEecC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCeEcCCCCCCceEecCCCCEEEcc
Q 004400 483 EGNQLLLIYEYLE--NNSLARALFEHRLKLDWPTRRRICLGIARGLAYL-HGESRIKVVHRDIKATNVLLDKDLNSKISD 559 (756)
Q Consensus 483 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~g~~~iiH~Dikp~Nill~~~~~~kl~D 559 (756)
..++||||++ |..+..+.. . .++......++.+++..+..+ |..| |+|||+.+.||+++++ .+.|+|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~-~--~~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD-V--DLSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH-C--GGGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--
T ss_pred ---CCEEEEEecCCCccchhhHHh-c--cccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEe
Confidence 3479999999 655544322 1 112345667788888866664 6776 9999999999999988 899999
Q ss_pred CCccccC
Q 004400 560 FGLAKLD 566 (756)
Q Consensus 560 FGla~~~ 566 (756)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9998643
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.83 E-value=2.5e-09 Score=83.06 Aligned_cols=59 Identities=34% Similarity=0.558 Sum_probs=30.6
Q ss_pred CCcEEEeecCcccccCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCc
Q 004400 89 TLVNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQ 147 (756)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 147 (756)
+|+.|+|++|+|+...+..|.++++|++|+|++|+++...++.|.++++|+.|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555554444455555555555555555554444455555555555555554
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=4.3e-09 Score=81.78 Aligned_cols=61 Identities=33% Similarity=0.484 Sum_probs=47.6
Q ss_pred CCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcC
Q 004400 112 LNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGL 172 (756)
Q Consensus 112 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 172 (756)
++|++|+|++|+|+...+..|.++++|++|++++|+++...+..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888866566777888888888888888877777788888888888887765
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.80 E-value=3e-08 Score=97.76 Aligned_cols=135 Identities=23% Similarity=0.236 Sum_probs=100.2
Q ss_pred ccccCcccCCCCccEEEeeccCCcEEEEEEccccC-----------------c-----ccHHHHHHHHHHHHhCCCC--c
Q 004400 418 FATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKS-----------------K-----QGNREFINEIGMISALQHP--N 473 (756)
Q Consensus 418 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------~-----~~~~~~~~E~~~l~~l~h~--n 473 (756)
..+.+.||.|--+.||.|..+.|.++|||.-+... . .......+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34568999999999999999999999999753210 0 0113457799999998654 5
Q ss_pred eeeEeeEEEeCCeEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC
Q 004400 474 LVKLYGCCIEGNQLLLIYEYLENNSLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL 553 (756)
Q Consensus 474 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~ 553 (756)
+.+.+++ +...+||||++|-.|... +++......++..|++-+.-+-..| |||+|+.+-||++++||
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCC
Confidence 5555544 567899999999766432 2234455556666666666666665 99999999999999999
Q ss_pred CEEEccCCcccc
Q 004400 554 NSKISDFGLAKL 565 (756)
Q Consensus 554 ~~kl~DFGla~~ 565 (756)
.+.++||=.+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999977653
No 491
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.63 E-value=9.1e-09 Score=121.19 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=168.3
Q ss_pred ccceeccccccccCc--ccccCCcccCCCCCCCEEEccCCcccCccCcccccCCcce-eeccCccccccCCccCcCcCCC
Q 004400 14 KQKTVNQKRVLKEQN--LTGVLPPKLAELTFLQDIDLTLNYLSGTIPSQWASLPLLN-ISLIANRLKGPIPKYLANISTL 90 (756)
Q Consensus 14 ~~~~~~~~l~L~~~~--l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-l~l~~n~~~~~~p~~l~~l~~L 90 (756)
..+..+++|.+.+|. +.....+.|..|+.|++|||++|.=-+.+|..++.|-+|+ |++....+. .+|..|++|+.|
T Consensus 542 ~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L 620 (889)
T KOG4658|consen 542 SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKL 620 (889)
T ss_pred CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhh
Confidence 445578899999996 6655556788999999999999876679999999999997 677777777 899999999999
Q ss_pred cEEEeecCcccccCCcccCCCCCCcEEeccCCeec--ccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCc----E
Q 004400 91 VNLTVQYNQFSGELPEELGSLLNLEKLHLSSNNFT--GELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLE----K 164 (756)
Q Consensus 91 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~ 164 (756)
.+|++..+.-...+|..+..|++|++|.|..-... ...-..+..|.+|+.|....... .+-..+..++.|. .
T Consensus 621 ~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~ 698 (889)
T KOG4658|consen 621 IYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQS 698 (889)
T ss_pred heeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHh
Confidence 99999999766567787888999999999766422 22333345566666666644443 1112233344433 3
Q ss_pred EEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccc-------cccEEEcccccccCCCCccccCCCCCcEEE
Q 004400 165 LFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNM-------KMTKLILRNCNITGELPRYLGKMTKLKVLD 237 (756)
Q Consensus 165 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~-------~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 237 (756)
+.+.++... ..+..+..+.+|+.|.+.++.+.+......... .+..+...++..- ..+.+.-..++|+.|+
T Consensus 699 l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~ 776 (889)
T KOG4658|consen 699 LSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLS 776 (889)
T ss_pred hhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEE
Confidence 443333333 467778888999999998888865433221111 1222222222221 2233334578889999
Q ss_pred ccCCcCCCCCCccCcCCCCCCeEEecCcccccc
Q 004400 238 LSFNRLRGQIPSNFDDLYDVDYIYFAGNLLTGA 270 (756)
Q Consensus 238 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 270 (756)
+..+.....+......+..++.+-+..+.+.+.
T Consensus 777 l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 777 LVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred EecccccccCCCHHHHhhhcccEEecccccccc
Confidence 988877766666666666676666666666543
No 492
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.62 E-value=3.2e-07 Score=90.78 Aligned_cols=123 Identities=23% Similarity=0.225 Sum_probs=92.3
Q ss_pred CCcEEEEEEccccC-------cccHHHHHHHHHHHHhCCCC--ceeeEeeEEEeC----CeEEEEEEecCCC-CHHHHHH
Q 004400 439 DGTAIAVKQLSSKS-------KQGNREFINEIGMISALQHP--NLVKLYGCCIEG----NQLLLIYEYLENN-SLARALF 504 (756)
Q Consensus 439 ~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~----~~~~lV~e~~~~g-sL~~~l~ 504 (756)
.++.+.+|...... ........+|...+..+... ...+.+++.... ...++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 35566666543221 12345678899888887543 345566666542 2458999999985 7998886
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCC---CEEEccCCcccc
Q 004400 505 EHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDL---NSKISDFGLAKL 565 (756)
Q Consensus 505 ~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~---~~kl~DFGla~~ 565 (756)
... ..+......++.+++..++-||..| |+|+|+++.|||++.+. .+.++||+-++.
T Consensus 111 ~~~-~~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 111 QWE-QLDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred hhc-ccchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 533 2667788899999999999999997 99999999999999887 799999998874
No 493
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.62 E-value=2.4e-08 Score=117.63 Aligned_cols=250 Identities=18% Similarity=0.202 Sum_probs=154.8
Q ss_pred CCCCCCEEEccCCcccCccCcccccCCcceeeccCcc--ccccCCccCcCcCCCcEEEeecCcccccCCcccCCCCCCcE
Q 004400 39 ELTFLQDIDLTLNYLSGTIPSQWASLPLLNISLIANR--LKGPIPKYLANISTLVNLTVQYNQFSGELPEELGSLLNLEK 116 (756)
Q Consensus 39 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~l~l~~n~--~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 116 (756)
+....+.+.+-+|.+. .++....+-..-.|.+..|. +.......|..++.|+.|||++|.=-+.+|..+++|-+|++
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred chhheeEEEEeccchh-hccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 3466778888888776 55555544433356777775 44444445777888999999988666688888888999999
Q ss_pred EeccCCeecccCCccccCCCCCCEEEeeCCcccccCChhhcCcCCCcEEEccCCcCc--CCCCccccCCCCCCeEEccCC
Q 004400 117 LHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPSFIQNWTKLEKLFIQPSGLA--GPIPSGIFSLENLTDLRISDL 194 (756)
Q Consensus 117 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~n 194 (756)
|+|++..++ .+|..+.+|..|.+|++..+.-...+|..+..+.+|++|.+..-... ...-..+.++.+|+.|.+...
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 999988888 88888888888999998888766566777777888988888766522 223344455666666655432
Q ss_pred CCCCCCcccccccc----ccEEEcccccccCCCCccccCCCCCcEEEccCCcCCCCCCccCcCCC------CCCeEEecC
Q 004400 195 NGPEATFPQLGNMK----MTKLILRNCNITGELPRYLGKMTKLKVLDLSFNRLRGQIPSNFDDLY------DVDYIYFAG 264 (756)
Q Consensus 195 ~~~~~~~~~~~~~~----L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~------~L~~L~ls~ 264 (756)
.. ..........+ .+.+.+.++... ..+..+..+.+|+.|.+.++.+.......+.... ++..+...+
T Consensus 679 s~-~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~ 756 (889)
T KOG4658|consen 679 SV-LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILN 756 (889)
T ss_pred hh-HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhc
Confidence 22 11111111112 223333333433 4455678899999999999988643332222221 222222222
Q ss_pred cc-ccccCCchhhcCCCeeEeecCCCCCC
Q 004400 265 NL-LTGAIPPWMLERGDKIDLSYNNFTDG 292 (756)
Q Consensus 265 N~-l~~~~p~~~~~~l~~l~ls~N~l~~~ 292 (756)
.. +...-+..+.++++.+.+..-.....
T Consensus 757 ~~~~r~l~~~~f~~~L~~l~l~~~~~~e~ 785 (889)
T KOG4658|consen 757 CHMLRDLTWLLFAPHLTSLSLVSCRLLED 785 (889)
T ss_pred cccccccchhhccCcccEEEEeccccccc
Confidence 21 11111222377888888876655443
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.61 E-value=5.6e-10 Score=121.45 Aligned_cols=180 Identities=22% Similarity=0.207 Sum_probs=133.1
Q ss_pred CccCcCcCCCcEEEeecCcccccCCcccCCC-CCCcEEeccCCeec----------ccCCccccCCCCCCEEEeeCCccc
Q 004400 81 PKYLANISTLVNLTVQYNQFSGELPEELGSL-LNLEKLHLSSNNFT----------GELPKTFAKLTNMKDFRISDNQFT 149 (756)
Q Consensus 81 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~----------~~~p~~~~~l~~L~~L~L~~N~l~ 149 (756)
|-.+..+++|+.|.|.++.|.. . ..+..+ ..|++|..+ |.+. |.+-+++. --.|...+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~-~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~-Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-A-KGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPV-WNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-h-hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchh-hhhHhhhhcchhhHH
Confidence 5577888899999999998873 2 222222 245665443 3322 11211111 135888899999998
Q ss_pred ccCChhhcCcCCCcEEEccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCccccccccccEEEcccccccCCCCccccC
Q 004400 150 GQIPSFIQNWTKLEKLFIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFPQLGNMKMTKLILRNCNITGELPRYLGK 229 (756)
Q Consensus 150 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~ 229 (756)
.+-.++.-++.|+.|+|++|+++... .+..|+.|+.|||+.|.+...+.-.....+|..|.|++|.++... .+.+
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN~l~tL~--gie~ 252 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNNALTTLR--GIEN 252 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhhheeeeecccHHHhhh--hHHh
Confidence 77888888999999999999998543 788899999999999999888776666667999999999998442 4788
Q ss_pred CCCCcEEEccCCcCCCCCC-ccCcCCCCCCeEEecCccccc
Q 004400 230 MTKLKVLDLSFNRLRGQIP-SNFDDLYDVDYIYFAGNLLTG 269 (756)
Q Consensus 230 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~ 269 (756)
|.+|+.|||++|-|.+.-- ..++.+..|+.|+|.||++.+
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 9999999999998885322 235667788888999998864
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.59 E-value=7e-07 Score=86.39 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=106.3
Q ss_pred cccCcccCCCCccEEEeeccCCcEEEEEEcccc------CcccHHHHHHHHHHHHhCCCCc--eeeEeeEEE-e----CC
Q 004400 419 ATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSK------SKQGNREFINEIGMISALQHPN--LVKLYGCCI-E----GN 485 (756)
Q Consensus 419 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~------~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~-~----~~ 485 (756)
-..---|+||-+.|++-.+. |+.+-+|+-... -+.+...|.+|...|.++..-+ +.+++ ++. . ..
T Consensus 21 ve~pN~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~ 98 (216)
T PRK09902 21 VEEPNYRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEW 98 (216)
T ss_pred ecCCCcCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCce
Confidence 33345578999999997765 446888887532 1446688999999999985422 44444 332 1 23
Q ss_pred eEEEEEEecCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCC--EEEccCC
Q 004400 486 QLLLIYEYLEN-NSLARALFEHR-LKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLN--SKISDFG 561 (756)
Q Consensus 486 ~~~lV~e~~~~-gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~--~kl~DFG 561 (756)
..+||+|-++| -+|.+++.+.. ...+...+..+..+++..++-||..| +.|+|+.+.||+++.++. ++++||.
T Consensus 99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 46899998764 58988886432 35577788899999999999999997 999999999999986667 9999998
Q ss_pred ccc
Q 004400 562 LAK 564 (756)
Q Consensus 562 la~ 564 (756)
-++
T Consensus 176 k~r 178 (216)
T PRK09902 176 KSR 178 (216)
T ss_pred ccc
Confidence 776
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.54 E-value=3.5e-08 Score=108.53 Aligned_cols=150 Identities=19% Similarity=0.337 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccCcce--------eeccccCccCCchHhhhc
Q 004400 520 LGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEENTHI--------STRVAGTIGYMAPEYAMR 591 (756)
Q Consensus 520 ~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~ 591 (756)
.+++.|+.|+|..- ++||++|.|++|.++..+..||+.|+.+.......... ..-..-...|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 35669999999764 79999999999999999999999999886443311111 011123457999999999
Q ss_pred CCCCcccchhhHHHHHHHHHhCCCCC-CccchhhHHHHHHHHHhcCccccccccCCCCCCCHHHHHHHHHHHHHhhcCCC
Q 004400 592 GHLTEKADVYSFGIVALEIVSGRSNV-TKEDMFYLLDWALVLKEQGKLMELVDTNPGSNFDKEQVMVMINVALLCANASP 670 (756)
Q Consensus 592 ~~~~~~~Dv~slGv~l~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~P 670 (756)
...+.++|+||+||++|.+..|..+. ...+........ ...+......++.+.+.++.+-+.+.+..++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~----------~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS----------RNLLNAGAFGYSNNLPSELRESLKKLLNGDS 253 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh----------hcccccccccccccCcHHHHHHHHHHhcCCc
Confidence 88899999999999999998554443 332221111100 0111111111222333457788889999999
Q ss_pred CCCCCHHHHHH
Q 004400 671 TIRPSMSSVLR 681 (756)
Q Consensus 671 ~~RPt~~ev~~ 681 (756)
..||++.++..
T Consensus 254 ~~rp~~~~l~~ 264 (700)
T KOG2137|consen 254 AVRPTLDLLLS 264 (700)
T ss_pred ccCcchhhhhc
Confidence 99998888744
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.49 E-value=2e-09 Score=117.21 Aligned_cols=177 Identities=24% Similarity=0.265 Sum_probs=110.7
Q ss_pred CcccCCCCCCCEEEccCCcccCccCcccccC-CcceeeccCcccc----------ccCCccCcCcCCCcEEEeecCcccc
Q 004400 34 PPKLAELTFLQDIDLTLNYLSGTIPSQWASL-PLLNISLIANRLK----------GPIPKYLANISTLVNLTVQYNQFSG 102 (756)
Q Consensus 34 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~l~l~~n~~~----------~~~p~~l~~l~~L~~L~L~~N~l~~ 102 (756)
|-.|..++.|+.|.|+++.|.. . ..+..+ ..|+-++.+|.+. |.+-+++.- -.|...+.++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~-~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~W-n~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-A-KGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVW-NKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-h-hhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhh-hhHhhhhcchhhHH-
Confidence 5567788999999999999973 1 112222 1233333333322 111111111 24677788888887
Q ss_pred cCCcccCCCCCCcEEeccCCeecccCCccccCCCCCCEEEeeCCcccccCCh-hhcCcCCCcEEEccCCcCcCCCCcccc
Q 004400 103 ELPEELGSLLNLEKLHLSSNNFTGELPKTFAKLTNMKDFRISDNQFTGQIPS-FIQNWTKLEKLFIQPSGLAGPIPSGIF 181 (756)
Q Consensus 103 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~ 181 (756)
....++.-++.|+.|+|++|+++... .+..|+.|++|||+.|+++ .+|. .-.++. |+.|.|++|-++. -..+.
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~t--L~gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTT--LRGIE 251 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHh--hhhHH
Confidence 66677777888888888888887333 5777888888888888888 4443 223344 8888888888862 34566
Q ss_pred CCCCCCeEEccCCCCCCCCc--cccccccccEEEccccccc
Q 004400 182 SLENLTDLRISDLNGPEATF--PQLGNMKMTKLILRNCNIT 220 (756)
Q Consensus 182 ~l~~L~~L~l~~n~~~~~~~--~~~~~~~L~~L~L~~n~l~ 220 (756)
+|.+|..||+++|-+.+..- +.+....|..|+|.+|.+-
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 77778888888776655321 1122234666666666664
No 498
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.49 E-value=2.1e-06 Score=86.00 Aligned_cols=138 Identities=16% Similarity=0.217 Sum_probs=86.3
Q ss_pred CcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCc--eeeEeeEEEeCCeEEEEEEecCCCC-
Q 004400 422 NNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPN--LVKLYGCCIEGNQLLLIYEYLENNS- 498 (756)
Q Consensus 422 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gs- 498 (756)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+.+++..+.+...+|||+++|..
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 47899999999984 25567888876432 3355788999999986443 4677888878888899999999963
Q ss_pred HHHHH---------------------HhcC-CCCCHHHHHH-HHH----------HHHH-HHHHHHcC-CCCCeEcCCCC
Q 004400 499 LARAL---------------------FEHR-LKLDWPTRRR-ICL----------GIAR-GLAYLHGE-SRIKVVHRDIK 543 (756)
Q Consensus 499 L~~~l---------------------~~~~-~~l~~~~~~~-i~~----------~ia~-~L~~LH~~-g~~~iiH~Dik 543 (756)
+...+ +.-. ...+...... +.. .+.. ..++|... ..+.++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 21111 1100 0111111000 000 0001 11222211 13357899999
Q ss_pred CCceEecCCCCEEEccCCcccc
Q 004400 544 ATNVLLDKDLNSKISDFGLAKL 565 (756)
Q Consensus 544 p~Nill~~~~~~kl~DFGla~~ 565 (756)
|.||++++++ +.|+||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999888 99999998763
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.48 E-value=5.6e-09 Score=91.16 Aligned_cols=109 Identities=21% Similarity=0.294 Sum_probs=59.7
Q ss_pred CcEEEeecCcccccCCcccC---CCCCCcEEeccCCeecccCCccccC-CCCCCEEEeeCCcccccCChhhcCcCCCcEE
Q 004400 90 LVNLTVQYNQFSGELPEELG---SLLNLEKLHLSSNNFTGELPKTFAK-LTNMKDFRISDNQFTGQIPSFIQNWTKLEKL 165 (756)
Q Consensus 90 L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 165 (756)
+-.|+|+.++|. .+++... ....|+..+|++|.+. ..|..|.. .+.++.|+|++|+|+ .+|..++.++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 344555555554 3444332 3334555566666665 44444433 345666666666666 555556666666666
Q ss_pred EccCCcCcCCCCccccCCCCCCeEEccCCCCCCCCcc
Q 004400 166 FIQPSGLAGPIPSGIFSLENLTDLRISDLNGPEATFP 202 (756)
Q Consensus 166 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 202 (756)
+++.|.+. ..|..+..+.+|-.|+..+|.+.+++.+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccccCcHH
Confidence 66666665 4555555566666666555555554444
No 500
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.45 E-value=2.4e-08 Score=108.26 Aligned_cols=190 Identities=19% Similarity=0.133 Sum_probs=141.2
Q ss_pred HhhcCccccCcccCCCCccEEEeeccCCcEEEEEEccccCcccHHHHHHHHHHHHhCCCCc-eeeEeeEEEeCCeEEEEE
Q 004400 413 AATNNFATDNNIGEGGFGPVYKGLLADGTAIAVKQLSSKSKQGNREFINEIGMISALQHPN-LVKLYGCCIEGNQLLLIY 491 (756)
Q Consensus 413 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 491 (756)
..+.-+..-+..++|+++++||.+-...+....+.+... ....-++++|.+++||| .+..++-+..++..++++
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~ 313 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPM 313 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhh
Confidence 344445555678899999999998554555556666433 34556889999999999 777777777888999999
Q ss_pred EecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEcCCCCCCceEecCCCCEEEccCCccccCcccC
Q 004400 492 EYLENN-SLARALFEHRLKLDWPTRRRICLGIARGLAYLHGESRIKVVHRDIKATNVLLDKDLNSKISDFGLAKLDEEEN 570 (756)
Q Consensus 492 e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~g~~~iiH~Dikp~Nill~~~~~~kl~DFGla~~~~~~~ 570 (756)
+|+.+| +-..........+...+...++..-+++++|+|+.- -+||| ||+..+ +..|..||+.+.......
T Consensus 314 ~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 314 RICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred hhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc
Confidence 999988 222222122223444555667777889999999863 48999 777766 578999999987655443
Q ss_pred cceeeccccCccCCchHhhhcCCCCcccchhhHHHHHHHHHhCCCCC
Q 004400 571 THISTRVAGTIGYMAPEYAMRGHLTEKADVYSFGIVALEIVSGRSNV 617 (756)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 617 (756)
......+|+.++|||+.....+..+.|+|+.|+-..++.-|-.|-
T Consensus 386 --~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 --KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred --ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 334567999999999999999999999999998777777776654
Done!