BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004401
(756 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 15/141 (10%)
Query: 611 TAVQLSTDHSTSIEEEIIRIKNEHP-DDSQCIV-NDRVKGRLKVTRAFGAGFLK------ 662
+AV LS DH+ E E+ R+K EHP ++++ +V DR+ G L RAFG K
Sbjct: 235 SAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQ 294
Query: 663 -------KPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLT 715
+LND F T PY++ P + + RL P+D+FLVL++DGL++ +
Sbjct: 295 KRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354
Query: 716 NQEVVSLVESFMEKFPDGDPC 736
Q+VV +V ++ P
Sbjct: 355 RQDVVRIVGEYLTGMHHQQPI 375
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 15/141 (10%)
Query: 611 TAVQLSTDHSTSIEEEIIRIKNEHP-DDSQCIV-NDRVKGRLKVTRAFGAGFLK------ 662
+AV LS DH+ E E+ R+K EHP ++++ +V DR+ G L RAFG K
Sbjct: 235 SAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQ 294
Query: 663 -------KPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLT 715
+LND F T PY++ P + + RL P+D+FLVL++DGL++ +
Sbjct: 295 KRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354
Query: 716 NQEVVSLVESFMEKFPDGDPC 736
Q+VV +V ++ P
Sbjct: 355 RQDVVRIVGEYLTGMHHQQPI 375
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 66/200 (33%)
Query: 531 GSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVT 590
G +V L+ +D+YV N GDSR +V
Sbjct: 131 GCTAVVALLHGKDLYVANAGDSRCVVC--------------------------------- 157
Query: 591 LGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRL 650
R GK A+++S DH E RI+ + ++ RV G L
Sbjct: 158 ---RNGK--------------ALEMSFDHKPEDTVEYQRIEKA---GGRVTLDGRVNGGL 197
Query: 651 KVTRAFG-AGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDG 709
++RA G G+ K+N +L IS P + + + P D+F+VL+ DG
Sbjct: 198 NLSRAIGDHGY----KMNKSL--------PAEEQMISALPDIEKITVGPEDEFMVLACDG 245
Query: 710 LYQYLTNQEVVSLVESFMEK 729
++ ++T+++VV V+ + K
Sbjct: 246 IWNFMTSEQVVQFVQERINK 265
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 612 AVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLL 671
A+ LS DH E+E RI+N Q RV G L ++R+ G +LK
Sbjct: 186 AMPLSVDHKPDREDEYARIENAGGKVIQW-QGARVFGVLAMSRSIGDRYLK--------- 235
Query: 672 EMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVES--FMEK 729
PY+ P + + D+ L+L+SDGL+ + NQEV + M
Sbjct: 236 -----------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWH 284
Query: 730 FPDGDPCTAPNRGAASPRSKESWD 753
+G P A P + + D
Sbjct: 285 KKNGAPPLAERGKGIDPACQAAAD 308
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 612 AVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLL 671
A+ LS DH E+E RI+N Q RV G L ++R+ G +LK
Sbjct: 183 AMPLSVDHKPDREDEYARIENAGGKVIQ-WQGARVFGVLAMSRSIGDRYLK--------- 232
Query: 672 EMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSL 722
PY+ P + + D+ L+L+SDGL+ + NQEV +
Sbjct: 233 -----------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 272
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 612 AVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLL 671
A+ LS DH E+E RI+N Q RV G L ++R+ G +LK
Sbjct: 172 AMPLSVDHKPDREDEYARIENAGGKVIQ-WQGARVFGVLAMSRSIGDRYLK--------- 221
Query: 672 EMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSL 722
PY+ P + + D+ L+L+SDGL+ + NQEV +
Sbjct: 222 -----------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 261
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 612 AVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLL 671
A+ LS DH E+E RI+N Q RV G L ++R+ G +LK
Sbjct: 196 AMPLSVDHKPDREDEYARIENAGGKVIQ-WQGARVFGVLAMSRSIGDRYLK--------- 245
Query: 672 EMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVES--FMEK 729
PY+ P + + D+ L+L+SDGL+ + NQEV + M
Sbjct: 246 -----------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWH 294
Query: 730 FPDGDPCTAPNRGAASPRSKESWD 753
+G P A P + + D
Sbjct: 295 KKNGAPPLAERGKGIDPACQAAAD 318
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 612 AVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLL 671
A+ LS DH E+E RI+N Q RV G L ++R+ G +LK
Sbjct: 187 AMPLSVDHKPDREDEYARIENAGGKVIQ-WQGARVFGVLAMSRSIGDRYLK--------- 236
Query: 672 EMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVES--FMEK 729
PY+ P + + D+ L+L+SDGL+ + NQEV + M
Sbjct: 237 -----------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWH 285
Query: 730 FPDGDPCTAPNRGAASPRSKESWD 753
+G P A P + + D
Sbjct: 286 KKNGAPPLAERGKGIDPACQAAAD 309
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 612 AVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLL 671
A+ LS DH E+E RI+N Q RV G L ++R+ G +LK
Sbjct: 189 AMPLSVDHKPDREDEYARIENAGGKVIQ-WQGARVFGVLAMSRSIGDRYLK--------- 238
Query: 672 EMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVES--FMEK 729
PY+ P + + D+ L+L+SDGL+ + NQEV + M
Sbjct: 239 -----------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWH 287
Query: 730 FPDGDPCTAPNRGAASPRSKESWD 753
+G P A P + + D
Sbjct: 288 KKNGAPPLAERGKGIDPACQAAAD 311
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 71/251 (28%)
Query: 498 VLRALSRALDLTELAYLDMTEKVLDTNPELALM-----------GSCLLVVLMRDEDVYV 546
V R L +A D+ E ++L+ + L L L G+ +V ++ + +YV
Sbjct: 104 VRRVLLQAFDVVERSFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYV 163
Query: 547 MNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVTLGERGGKVAADEAPAQ 606
NVG +RA++ + S++DG
Sbjct: 164 ANVGTNRALLCK-------------------STVDG------------------------ 180
Query: 607 AMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKL 666
L QL+ DH+T E+E+ R+ D + + G+ + TR G +K
Sbjct: 181 ---LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDYKVKYGYT 236
Query: 667 NDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYL--------TNQE 718
+ LL +++ I P I L + FLVL S+GLY+ L NQE
Sbjct: 237 DIDLLSAAKSKPIIAEPEIHGAQPLDGV-----TGFLVLMSEGLYKALEAAHGPGQANQE 291
Query: 719 VVSLVESFMEK 729
+ +++++ K
Sbjct: 292 IAAMIDTEFAK 302
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 23/113 (20%)
Query: 611 TAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVND-RVKGRLKVTRAFGAGFLKKPKLNDT 669
T + LS DH ++E RI E N RV G L ++R+ G +LK
Sbjct: 162 TPLALSVDHKPDRDDEAARI--EAAGGKVIRWNGARVFGVLAMSRSIGDRYLK------- 212
Query: 670 LLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSL 722
P + P + +R D L+L+SDGL+ +TN+EV L
Sbjct: 213 -------------PSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDL 252
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 611 TAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTL 670
TA+ LS DH E+E RI+ Q RV G L ++R+ G +LK
Sbjct: 153 TALPLSVDHKPDREDEAARIEAAGGKVIQW-NGARVFGVLAMSRSIGDRYLK-------- 203
Query: 671 LEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSL 722
P I P + ++ D L+L+SDG++ +T++E +
Sbjct: 204 ------------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEM 243
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 611 TAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTL 670
TA+ LS DH E+E RI+ Q RV G L ++R+ G +LK
Sbjct: 168 TALPLSVDHKPDREDEAARIEAAGGKVIQW-NGARVFGVLAMSRSIGDRYLK-------- 218
Query: 671 LEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSL 722
P I P + ++ D L+L+SDG++ +T++E +
Sbjct: 219 ------------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEM 258
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 611 TAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTL 670
TA+ LS DH E+E RI+ Q RV G L ++R+ G +LK
Sbjct: 156 TALPLSVDHKPDREDEAARIEAAGGKVIQ-WNGARVFGVLAMSRSIGDRYLK-------- 206
Query: 671 LEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSL 722
P I P + ++ D L+L+SDG++ +T++E +
Sbjct: 207 ------------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEM 246
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 60/207 (28%)
Query: 531 GSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVT 590
G+ +V ++ + +YV NVG +RA++ + S++DG
Sbjct: 165 GAMAVVAVLLNNKLYVANVGTNRALLCK-------------------STVDG-------- 197
Query: 591 LGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRL 650
L QL+ DH+T E+E+ R+ D + + G+
Sbjct: 198 -------------------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ- 237
Query: 651 KVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGL 710
+ TR G +K + LL +++ I P I L + FLVL S+GL
Sbjct: 238 ESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV-----TGFLVLMSEGL 292
Query: 711 YQYL--------TNQEVVSLVESFMEK 729
Y+ L NQE+ +++++ K
Sbjct: 293 YKALEAAHGPGQANQEIAAMIDTEFAK 319
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 60/207 (28%)
Query: 531 GSCLLVVLMRDEDVYVMNVGDSRAIVAQYQPEAVRGSGWMKGQVDTGSSMDGIVEESSVT 590
G+ +V ++ + +YV NVG +RA++ + S++DG
Sbjct: 167 GAMAVVAVLLNNKLYVANVGTNRALLCK-------------------STVDG-------- 199
Query: 591 LGERGGKVAADEAPAQAMKLTAVQLSTDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRL 650
L QL+ DH+T E+E+ R+ D + + G+
Sbjct: 200 -------------------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ- 239
Query: 651 KVTRAFGAGFLKKPKLNDTLLEMFRNEYIGTAPYISCTPSLCHLRLCPRDQFLVLSSDGL 710
+ TR G +K + LL +++ I P I L + FLVL S+GL
Sbjct: 240 ESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV-----TGFLVLMSEGL 294
Query: 711 YQYL--------TNQEVVSLVESFMEK 729
Y+ L NQE+ +++++ K
Sbjct: 295 YKALEAAHGPGQANQEIAAMIDTEFAK 321
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
Query: 616 STDHSTSIEEEIIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKKPKLNDTLLEMFR 675
+ DH E RI+N ++ RV G L V+RA G K
Sbjct: 168 TQDHKPCNPREKERIQNA----GGSVMIQRVNGSLAVSRALGDYDYKCVD---------- 213
Query: 676 NEYIGTAP---YISCTPSLCHLRLCPRDQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPD 732
G P +S P + + D+F++L+ DG++ ++N+E+ V+S +E D
Sbjct: 214 ----GKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLEVSDD 269
>pdb|4AH6|A Chain A, Human Mitochondrial Aspartyl-Trna Synthetase
pdb|4AH6|B Chain B, Human Mitochondrial Aspartyl-Trna Synthetase
pdb|4AH6|C Chain C, Human Mitochondrial Aspartyl-Trna Synthetase
pdb|4AH6|D Chain D, Human Mitochondrial Aspartyl-Trna Synthetase
Length = 617
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 185 QNAASEPGGGRVHFSAPLGGLYVKRKKKRGILGMSG------IRKAFHDKKRPWVVPVLN 238
Q+A S+P G P G Y+KRK I + I F + R W PV N
Sbjct: 318 QDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVAN 377
Query: 239 FV 240
F+
Sbjct: 378 FI 379
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 700 DQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPD 732
DQF++L+ DG++ + N+E+ V S +E D
Sbjct: 231 DQFIILACDGIWDVMGNEELCDFVRSRLEVTDD 263
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 700 DQFLVLSSDGLYQYLTNQEVVSLVESFMEKFPD 732
DQF++L+ DG++ + N+E+ V S +E D
Sbjct: 231 DQFIILACDGIWDVMGNEELCDFVRSRLEVTDD 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,481,221
Number of Sequences: 62578
Number of extensions: 733252
Number of successful extensions: 1576
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1517
Number of HSP's gapped (non-prelim): 54
length of query: 756
length of database: 14,973,337
effective HSP length: 106
effective length of query: 650
effective length of database: 8,340,069
effective search space: 5421044850
effective search space used: 5421044850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)