BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004409
(755 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91ZP3|LPIN1_MOUSE Phosphatidate phosphatase LPIN1 OS=Mus musculus GN=Lpin1 PE=1
SV=1
Length = 924
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 1 MYTVGRIGSYISRGVYTVSAPFHP--FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLK 58
M VG++ + V + +P G +DIIV+ QP+GS + SP++VRFGK GVL+
Sbjct: 1 MNYVGQLAGQVFVTVKELYKGLNPATLSGCIDIIVIRQPNGSLQCSPFHVRFGKM-GVLR 59
Query: 59 TKEKVVTINVNGVDANFNMYLDHKGEAYFLKEAD 92
++EKVV I +NG + +M L GEA+F++E D
Sbjct: 60 SREKVVDIEINGESVDLHMKLGDNGEAFFVQETD 93
>sp|Q99PI4|LPIN3_MOUSE Phosphatidate phosphatase LPIN3 OS=Mus musculus GN=Lpin3 PE=1
SV=1
Length = 848
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 1 MYTVGRIGSYISRGVYTVSAPFHP--FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLK 58
M VG++ + V + +P G +D++VV Q DGSF+ SP++VRFGK GVL+
Sbjct: 1 MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVRQRDGSFRCSPFHVRFGKL-GVLR 59
Query: 59 TKEKVVTINVNGVDANFNMYLDHKGEAYFLKEADVEE 95
++EKVV I +NG + +M L GEA+F++E D +E
Sbjct: 60 SREKVVDIEINGEPVDLHMKLGDSGEAFFVQELDSDE 96
>sp|Q7TNN8|LPIN3_MUSSP Phosphatidate phosphatase LPIN3 OS=Mus spretus GN=Lpin3 PE=2 SV=1
Length = 847
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 1 MYTVGRIGSYISRGVYTVSAPFHP--FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLK 58
M VG++ + V + +P G +D++VV Q DGSF+ SP++VRFGK GVL+
Sbjct: 1 MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVRQRDGSFRCSPFHVRFGKL-GVLR 59
Query: 59 TKEKVVTINVNGVDANFNMYLDHKGEAYFLKEADVEE 95
++EKVV I +NG + +M L GEA+F++E D +E
Sbjct: 60 SREKVVDIEINGEPVDLHMKLGDSGEAFFVQELDSDE 96
>sp|Q14693|LPIN1_HUMAN Phosphatidate phosphatase LPIN1 OS=Homo sapiens GN=LPIN1 PE=1
SV=2
Length = 890
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 1 MYTVGRIGSYISRGVYTVSAPFHP--FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLK 58
M VG++ + V + +P G +DIIV+ QP+G+ + SP++VRFGK GVL+
Sbjct: 1 MNYVGQLAGQVFVTVKELYKGLNPATLSGCIDIIVIRQPNGNLQCSPFHVRFGKM-GVLR 59
Query: 59 TKEKVVTINVNGVDANFNMYLDHKGEAYFLKEAD 92
++EKVV I +NG + +M L GEA+F++E D
Sbjct: 60 SREKVVDIEINGESVDLHMKLGDNGEAFFVQETD 93
>sp|Q9BQK8|LPIN3_HUMAN Phosphatidate phosphatase LPIN3 OS=Homo sapiens GN=LPIN3 PE=1
SV=3
Length = 851
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 1 MYTVGRIGSYISRGVYTVSAPFHP--FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLK 58
M VG++ + V + +P G +D++VV+Q DGSF+ SP++VRFGK GVL+
Sbjct: 1 MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKL-GVLR 59
Query: 59 TKEKVVTINVNGVDANFNMYLDHKGEAYFLKE 90
++EKVV I +NG + +M L GEA+F++E
Sbjct: 60 SREKVVDIELNGEPVDLHMKLGDSGEAFFVQE 91
>sp|Q92539|LPIN2_HUMAN Phosphatidate phosphatase LPIN2 OS=Homo sapiens GN=LPIN2 PE=1
SV=1
Length = 896
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 25 FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLKTKEKVVTINVNGVDANFNMYLDHKGE 84
G +D+IVV+Q DGS++ SP++VRFGK GVL++KEKV+ I +NG + +M L GE
Sbjct: 27 LSGCIDVIVVQQQDGSYQCSPFHVRFGKL-GVLRSKEKVIDIEINGSAVDLHMKLGDNGE 85
Query: 85 AYFL 88
A+F+
Sbjct: 86 AFFV 89
>sp|Q99PI5|LPIN2_MOUSE Phosphatidate phosphatase LPIN2 OS=Mus musculus GN=Lpin2 PE=1
SV=2
Length = 893
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 25 FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLKTKEKVVTINVNGVDANFNMYLDHKGE 84
G +D++VV Q DGS++ SP++VRFGK GVL++KEKV+ I +NG + +M L GE
Sbjct: 27 LSGCIDVVVVRQQDGSYQCSPFHVRFGKL-GVLRSKEKVIDIEINGSAVDLHMKLGDNGE 85
Query: 85 AYFL 88
A+F+
Sbjct: 86 AFFV 89
>sp|P32567|PAH1_YEAST Phosphatidic acid phosphohydrolase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PAH1 PE=1 SV=1
Length = 862
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 10 YISRGVYTVSAPF---HP--FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLKTKEKVV 64
Y+ R + +VS + +P GA+D+IVVE PDG SP++VRFGKFQ +LK +K V
Sbjct: 3 YVGRALGSVSKTWSSINPATLSGAIDVIVVEHPDGRLSCSPFHVRFGKFQ-ILKPSQKKV 61
Query: 65 TINVNGVDANFNMYLDHKGEAYFLKE 90
+ +N +N M L GEAYF+ E
Sbjct: 62 QVFINEKLSNMPMKLSDSGEAYFVFE 87
>sp|Q9UUJ6|NED1_SCHPO Nuclear elongation and deformation protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ned1 PE=1 SV=1
Length = 656
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 10 YISRGVYTVSAPFHP-----FGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLKTKEKVV 64
Y+ R +V+ ++ GA+D+IVVEQ D + SP++VRFGKF +L + +K V
Sbjct: 3 YVGRAFDSVTKTWNAINPSTLSGAIDVIVVEQEDKTLACSPFHVRFGKFSLLLPSDKK-V 61
Query: 65 TINVNGVDANFNMYLDHKGEAYFL 88
+VNG FNM L GEA+F+
Sbjct: 62 EFSVNGQLTGFNMKLGDGGEAFFV 85
>sp|P41882|YPT4_CAEEL Ankyrin repeat-containing protein F37A4.4 OS=Caenorhabditis elegans
GN=F37A4.4 PE=4 SV=2
Length = 1163
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 412 YLASG---KCGEVHVHLETVHVTTELLSKDTDVVQAEEIELEKEP------GEVLE---- 458
++ASG K GE L+ ++ +LS+ T+ + + L K E+L+
Sbjct: 15 FVASGAGEKQGESQ--LQQIYDELSILSRVTNAIALQAAALSKTVKIREVITELLKVDNG 72
Query: 459 NHSDQVNQAPCVLEHIEKDLKEPPEAPKSSTQVLG--EESVLCSIKEVNSQNSCLTPIEV 516
N S+ ++ P H+ K+L E K S Q + E + +KE+ + N L +E
Sbjct: 73 NFSNLLSLDPA---HLVKNL---DELHKKSLQAVSGSNEQLQQDLKEMIAMNGLLAAVES 126
Query: 517 QE--EKGITDALQYLESTDESQELYNDSVLK------RAIGNSPSDSSEEEQFLFSDLDE 568
+ EK ++L L+ DE E+ ++S++ +A+ P S+E + +FS +
Sbjct: 127 ENYTEKATVNSLIVLKKVDEKMEICDESLITIMFNISQAMSGVPFAESDEMK-IFSSMKT 185
Query: 569 FKLSKDQGVDSSSPDSVKKSDDPSFSAEGIKEVNGSVNTIDESSSLSEMSGLYNLLNDFE 628
K + + + S P ++K + ++ G E+N ++NTI + L + + N+L F+
Sbjct: 186 MKKAFYKCI-SKFPAFMQKLYEYNYPLSGFLELNDTMNTIKALNELDIANKIPNMLQKFK 244
Query: 629 NTTDKLGAISDPIIIHKSHGPAEEVGRLAES 659
+ A+ D H++ G G+L +S
Sbjct: 245 TPFLNILAVGD----HRNKG---NTGKLLQS 268
>sp|P45211|MOEB_HAEIN Molybdopterin-synthase adenylyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=moeB PE=3 SV=1
Length = 243
Score = 34.3 bits (77), Expect = 4.2, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 177 DIDLVRLSSLERAEFAADLLEMKWSTNLPSSMSRKENVSQILPHDGLDNMVAKDIQVNNE 236
D D V LS+L+R +L N+P S K + QI PH ++ + AK +
Sbjct: 62 DFDTVSLSNLQR-----QVLHCDARLNMPKVESAKIALEQINPHINIETINAKLDEEKLA 116
Query: 237 EI--HVDLSVDDYERNRNDQSILDKECGSQSEQMASGS 272
EI H D+ +D + N ++ LD++C + SG+
Sbjct: 117 EIIPHFDIVLDCTD-NVEIRNQLDRQCNHMKVPLISGA 153
>sp|Q0CSG1|UTP10_ASPTN U3 small nucleolar RNA-associated protein 10 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=utp10 PE=3 SV=1
Length = 1801
Score = 34.3 bits (77), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 592 SFSAEGIKEVNGSVNTIDESSSLSEMSGLYNLLNDFENTTDK-------LGAISDPIIIH 644
S+ E + V G + ++++ +S L L N FE+ D+ L IS+P+I
Sbjct: 1614 SYIIENVVAVLGKASPSNQNTRTLWLSTLRMLRNAFEHDQDEFWQSPSHLNQISEPLISQ 1673
Query: 645 KSHGPAEEVGR--LAESLPNMRSLSVKLDAHDPHHPLSHSL 683
+H + +AE++P + L+V D+ D H L+ L
Sbjct: 1674 LAHATTSSLANTVIAEAVPAITELAVAADSTDNHKELNTVL 1714
>sp|Q4WLI9|UTP10_ASPFU U3 small nucleolar RNA-associated protein 10 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=utp10 PE=3 SV=1
Length = 1798
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 592 SFSAEGIKEVNGSVNTIDESSSLSEMSGLYNLLNDFENTTDK-------LGAISDPIIIH 644
S+ E + V G + D+S+ ++ + L N FE+ D+ L IS P+I
Sbjct: 1611 SYIIESVVSVLGKASPADKSTKALWLATMRLLRNAFEHDQDEFWQSPSHLNQISTPLINQ 1670
Query: 645 KSHGP--AEEVGRLAESLPNMRSLSVKLDAHDPHHPLSHSL 683
+H + +AE++P + L+V D+ D H L+ +L
Sbjct: 1671 LAHATNSSTAATVIAEAVPAITELAVAADSTDNHKELNTAL 1711
>sp|Q7VI82|ACCA_HELHP Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1)
GN=accA PE=3 SV=1
Length = 308
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 430 VTTELLSKDTDVVQAEEIELEKEPGEVLENHSD----QVNQ---APCVLEHIEKDLKEPP 482
+ + ++S D D + E ELEKE V N SD Q+ + P +++IE LK P
Sbjct: 18 IESAIISGDNDAISILEKELEKEVSSVYSNISDYQKLQLARHPDRPYAMDYIESILKNPY 77
Query: 483 EAPKSSTQVLGEESVLCSIKEVNSQNSCLTPIEVQEEKG 521
E +++++C + ++ Q + + + EEKG
Sbjct: 78 EI-NGDRHFKDDKAIVCFLGKIGEQTTMI----IGEEKG 111
>sp|Q12451|OSH2_YEAST Oxysterol-binding protein homolog 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=OSH2 PE=1 SV=1
Length = 1283
Score = 33.1 bits (74), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 156 ILGLVLGRKSFKESRYQKGEGDIDLVR-LSSLERA-EFAADLLEMKWSTNLPSSMSRKEN 213
+LG + G ++ KG I+ R +++++ A FA D + +P S++ K
Sbjct: 354 LLGGITGTTRWR----LKGNHPIETTRWVNAIQSAIRFAKDKEILNKKKAVPPSLALKNK 409
Query: 214 VSQILPHDGLDNMVAKDIQVNNEEIHVDL----SVDDYERNRNDQSILDKECGSQSEQMA 269
++ H + + Q +H ++ SV Y R N+ S++ E
Sbjct: 410 SPALISHSKTQGSLPEASQYYQHTLHKEVIQPSSVSLYRRPSNNLSVVSSEIQLNDNLTE 469
Query: 270 SGSHFSSKNLENFVEESGIDVSC-LGSVEQVVESS 303
SG F SK +EN ++ S V GS Q V SS
Sbjct: 470 SGKRFVSKMIENRLDGSKTPVGVHTGSALQRVRSS 504
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 280,438,600
Number of Sequences: 539616
Number of extensions: 12241938
Number of successful extensions: 30550
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 29998
Number of HSP's gapped (non-prelim): 459
length of query: 755
length of database: 191,569,459
effective HSP length: 125
effective length of query: 630
effective length of database: 124,117,459
effective search space: 78193999170
effective search space used: 78193999170
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)