Query 004411
Match_columns 755
No_of_seqs 471 out of 3186
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 22:59:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004411.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004411hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 1E-174 3E-179 1541.3 76.3 751 2-754 4-765 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 1E-151 2E-156 1335.7 70.0 662 50-754 93-771 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 5E-143 1E-147 1273.0 71.7 663 48-754 8-681 (797)
4 PRK14501 putative bifunctional 100.0 1E-132 3E-137 1186.5 73.2 655 51-754 1-660 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 1E-122 2E-127 1065.4 51.6 657 50-754 2-660 (732)
6 PRK10117 trehalose-6-phosphate 100.0 1E-119 2E-124 999.7 47.8 456 50-543 1-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 2E-118 5E-123 1000.0 48.7 462 56-540 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 1E-118 2E-123 1004.9 32.9 467 52-540 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 9E-113 2E-117 938.3 44.3 467 46-541 10-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 4E-107 8E-112 915.2 48.9 454 52-539 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1.9E-97 4E-102 841.9 51.3 459 52-538 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 2.9E-31 6.3E-36 315.1 45.2 509 191-754 311-959 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 8.9E-30 1.9E-34 263.6 15.8 179 571-754 4-185 (266)
14 PF02358 Trehalose_PPase: Treh 100.0 1.5E-28 3.3E-33 255.2 10.1 165 589-754 1-168 (235)
15 cd03792 GT1_Trehalose_phosphor 99.9 5E-25 1.1E-29 243.9 25.0 301 166-540 63-371 (372)
16 PLN02939 transferase, transfer 99.9 2.7E-24 5.7E-29 252.4 31.8 317 171-542 592-968 (977)
17 PRK00654 glgA glycogen synthas 99.9 1.8E-24 3.9E-29 246.8 28.1 296 191-541 119-463 (466)
18 PLN02316 synthase/transferase 99.9 6.6E-24 1.4E-28 253.4 32.4 308 169-542 689-1035(1036)
19 PRK15484 lipopolysaccharide 1, 99.9 8.9E-24 1.9E-28 234.9 31.3 269 191-540 100-377 (380)
20 PRK14098 glycogen synthase; Pr 99.9 5.5E-24 1.2E-28 243.3 27.0 319 167-541 119-486 (489)
21 TIGR02472 sucr_P_syn_N sucrose 99.9 9E-24 1.9E-28 239.3 27.3 297 191-538 115-438 (439)
22 TIGR02095 glgA glycogen/starch 99.9 2.3E-23 5E-28 238.2 28.1 292 191-539 129-471 (473)
23 PRK14099 glycogen synthase; Pr 99.9 1.2E-23 2.6E-28 240.3 25.5 295 192-543 135-481 (485)
24 TIGR00685 T6PP trehalose-phosp 99.9 3.9E-24 8.5E-29 223.3 17.4 166 583-754 1-170 (244)
25 PLN02151 trehalose-phosphatase 99.9 4.7E-24 1E-28 229.0 18.0 167 581-754 94-272 (354)
26 TIGR03449 mycothiol_MshA UDP-N 99.9 2E-22 4.4E-27 225.3 31.8 287 191-541 102-402 (405)
27 TIGR02470 sucr_synth sucrose s 99.9 2.2E-22 4.8E-27 235.6 32.8 339 167-538 362-745 (784)
28 cd03818 GT1_ExpC_like This fam 99.9 8E-23 1.7E-27 228.4 26.2 289 185-535 84-395 (396)
29 PRK15427 colanic acid biosynth 99.9 2E-22 4.3E-27 226.0 28.5 275 191-540 119-405 (406)
30 PLN02580 trehalose-phosphatase 99.9 1.3E-23 2.8E-28 228.2 17.6 170 578-754 112-304 (384)
31 PLN00142 sucrose synthase 99.9 5E-22 1.1E-26 232.6 29.0 332 167-538 385-768 (815)
32 PLN02871 UDP-sulfoquinovose:DA 99.9 5.6E-22 1.2E-26 226.4 28.9 282 185-544 141-438 (465)
33 cd03791 GT1_Glycogen_synthase_ 99.9 5.9E-22 1.3E-26 226.7 27.8 310 171-538 111-474 (476)
34 cd03796 GT1_PIG-A_like This fa 99.9 6.2E-22 1.4E-26 221.4 27.4 276 192-543 90-370 (398)
35 PLN03017 trehalose-phosphatase 99.9 5.8E-23 1.2E-27 221.1 18.0 169 578-754 104-286 (366)
36 TIGR02149 glgA_Coryne glycogen 99.9 2.1E-21 4.6E-26 215.3 30.0 284 191-540 84-386 (388)
37 cd03800 GT1_Sucrose_synthase T 99.9 4.5E-21 9.8E-26 212.5 29.1 285 191-535 102-397 (398)
38 TIGR03088 stp2 sugar transfera 99.9 5.7E-21 1.2E-25 211.3 29.3 231 246-540 136-372 (374)
39 cd03813 GT1_like_3 This family 99.9 2.3E-21 5E-26 221.8 25.0 276 189-536 172-472 (475)
40 cd04951 GT1_WbdM_like This fam 99.9 1.3E-20 2.9E-25 205.5 28.0 280 182-538 73-358 (360)
41 cd05844 GT1_like_7 Glycosyltra 99.9 1.7E-20 3.7E-25 206.0 27.4 274 183-535 77-365 (367)
42 cd03819 GT1_WavL_like This fam 99.9 3.4E-20 7.4E-25 202.2 27.4 268 185-525 75-349 (355)
43 cd03806 GT1_ALG11_like This fa 99.9 2.1E-20 4.5E-25 210.5 25.7 272 188-528 107-414 (419)
44 cd04962 GT1_like_5 This family 99.9 1.1E-19 2.4E-24 199.9 30.1 285 177-539 74-369 (371)
45 cd03793 GT1_Glycogen_synthase_ 99.9 2.9E-20 6.3E-25 209.2 24.1 358 144-539 106-585 (590)
46 PRK15490 Vi polysaccharide bio 99.9 8.6E-20 1.9E-24 205.4 27.7 290 182-540 274-575 (578)
47 PRK10307 putative glycosyl tra 99.9 2.4E-19 5.3E-24 201.3 30.3 281 191-541 107-408 (412)
48 cd03812 GT1_CapH_like This fam 99.9 1E-19 2.2E-24 198.8 26.4 257 184-513 76-338 (358)
49 PLN02949 transferase, transfer 99.9 1.8E-19 3.8E-24 204.4 28.7 314 141-542 109-458 (463)
50 cd03805 GT1_ALG2_like This fam 99.9 1.3E-19 2.9E-24 201.2 27.2 281 190-533 94-391 (392)
51 PRK10187 trehalose-6-phosphate 99.9 1.4E-20 3.1E-25 198.7 18.0 163 584-754 13-177 (266)
52 PRK15179 Vi polysaccharide bio 99.8 8.6E-20 1.9E-24 214.1 25.1 276 192-537 402-690 (694)
53 cd03822 GT1_ecORF704_like This 99.8 2.6E-19 5.7E-24 194.8 26.5 278 191-538 77-365 (366)
54 cd03809 GT1_mtfB_like This fam 99.8 1.8E-19 4E-24 195.9 23.2 273 191-535 86-364 (365)
55 cd03807 GT1_WbnK_like This fam 99.8 5.3E-19 1.1E-23 191.0 26.6 280 185-537 77-363 (365)
56 PRK10125 putative glycosyl tra 99.8 1.4E-19 3E-24 202.7 22.3 187 289-539 212-403 (405)
57 cd04946 GT1_AmsK_like This fam 99.8 8.6E-19 1.9E-23 196.8 28.2 271 189-535 126-406 (407)
58 TIGR02918 accessory Sec system 99.8 1.2E-18 2.7E-23 199.3 29.6 271 190-539 211-498 (500)
59 cd03799 GT1_amsK_like This is 99.8 9.9E-19 2.2E-23 190.3 27.6 264 191-532 80-353 (355)
60 cd03821 GT1_Bme6_like This fam 99.8 5.4E-19 1.2E-23 191.6 25.4 274 191-535 88-374 (375)
61 PHA01633 putative glycosyl tra 99.8 6.1E-20 1.3E-24 198.4 16.4 190 294-535 118-334 (335)
62 cd03817 GT1_UGDG_like This fam 99.8 1.3E-18 2.8E-23 188.9 26.4 267 184-526 80-362 (374)
63 cd03801 GT1_YqgM_like This fam 99.8 2.5E-18 5.5E-23 184.8 27.7 283 183-538 80-373 (374)
64 cd03814 GT1_like_2 This family 99.8 1.6E-18 3.5E-23 188.2 25.9 273 185-538 80-363 (364)
65 cd03794 GT1_wbuB_like This fam 99.8 2.5E-18 5.4E-23 187.2 26.9 275 191-534 100-393 (394)
66 PLN02501 digalactosyldiacylgly 99.8 5.5E-19 1.2E-23 200.6 21.5 318 127-537 379-706 (794)
67 cd03798 GT1_wlbH_like This fam 99.8 3.4E-18 7.4E-23 184.6 26.2 278 191-539 94-375 (377)
68 cd04949 GT1_gtfA_like This fam 99.8 1.7E-18 3.6E-23 191.3 23.6 265 190-533 99-371 (372)
69 cd03820 GT1_amsD_like This fam 99.8 5.3E-18 1.1E-22 181.6 23.7 260 191-535 84-347 (348)
70 cd03823 GT1_ExpE7_like This fa 99.8 1.4E-17 2.9E-22 180.3 27.0 262 182-536 90-355 (359)
71 PRK09922 UDP-D-galactose:(gluc 99.8 4.1E-18 9E-23 187.9 23.1 240 182-508 78-326 (359)
72 cd03808 GT1_cap1E_like This fa 99.8 8.4E-18 1.8E-22 180.8 24.6 273 185-535 77-358 (359)
73 cd03816 GT1_ALG1_like This fam 99.8 8.5E-18 1.8E-22 189.2 24.9 272 191-536 96-409 (415)
74 PHA01630 putative group 1 glyc 99.8 6.3E-18 1.4E-22 184.1 22.7 211 246-539 94-329 (331)
75 PLN02846 digalactosyldiacylgly 99.8 5.6E-18 1.2E-22 190.0 22.4 267 184-539 112-390 (462)
76 TIGR03087 stp1 sugar transfera 99.8 2.8E-17 6E-22 183.8 25.4 264 191-538 105-394 (397)
77 cd03795 GT1_like_4 This family 99.8 4.4E-17 9.5E-22 177.5 23.7 260 191-525 84-350 (357)
78 cd03802 GT1_AviGT4_like This f 99.8 7.7E-17 1.7E-21 174.3 23.8 240 191-536 88-332 (335)
79 cd03804 GT1_wbaZ_like This fam 99.7 1.2E-16 2.7E-21 175.1 23.9 196 244-533 151-349 (351)
80 cd04955 GT1_like_6 This family 99.7 1.6E-16 3.4E-21 173.8 24.2 265 192-538 86-362 (363)
81 cd03811 GT1_WabH_like This fam 99.7 1.8E-16 3.9E-21 169.8 22.7 243 192-506 83-332 (353)
82 cd03825 GT1_wcfI_like This fam 99.7 2.2E-16 4.7E-21 172.6 23.2 194 289-539 159-363 (365)
83 COG0297 GlgA Glycogen synthase 99.7 1.6E-15 3.4E-20 170.5 26.0 297 191-541 131-478 (487)
84 PRK05749 3-deoxy-D-manno-octul 99.7 1.5E-15 3.1E-20 171.6 25.8 286 181-539 117-418 (425)
85 PLN02275 transferase, transfer 99.7 4.5E-16 9.7E-21 172.7 21.2 236 192-504 102-371 (371)
86 TIGR01484 HAD-SF-IIB HAD-super 99.7 2.8E-16 6.1E-21 159.4 12.1 158 587-754 1-166 (204)
87 PF00534 Glycos_transf_1: Glyc 99.6 1.3E-15 2.8E-20 149.5 13.1 155 324-520 13-171 (172)
88 KOG1111 N-acetylglucosaminyltr 99.5 2.3E-14 5E-19 149.8 11.6 221 213-506 113-335 (426)
89 cd04950 GT1_like_1 Glycosyltra 99.5 5.8E-13 1.3E-17 147.9 22.1 266 188-540 100-371 (373)
90 COG0561 Cof Predicted hydrolas 99.5 5.8E-13 1.3E-17 140.7 15.5 161 584-754 2-192 (264)
91 PTZ00174 phosphomannomutase; P 99.5 9.4E-13 2E-17 137.8 16.8 168 583-754 3-191 (247)
92 PLN02605 monogalactosyldiacylg 99.5 1.2E-11 2.7E-16 137.7 25.7 191 289-535 173-376 (382)
93 PLN02423 phosphomannomutase 99.4 1.7E-12 3.7E-17 135.6 16.0 161 585-754 7-192 (245)
94 TIGR01485 SPP_plant-cyano sucr 99.4 8.5E-13 1.8E-17 138.3 11.4 158 585-754 1-170 (249)
95 PRK15126 thiamin pyrimidine py 99.4 4.3E-12 9.4E-17 134.7 16.1 71 585-659 2-73 (272)
96 PRK10976 putative hydrolase; P 99.4 7.4E-12 1.6E-16 132.4 14.3 71 585-659 2-73 (266)
97 KOG0853 Glycosyltransferase [C 99.3 7.4E-11 1.6E-15 131.3 21.4 185 325-542 272-465 (495)
98 PRK10513 sugar phosphate phosp 99.3 3.2E-11 6.9E-16 127.8 17.9 72 584-659 2-77 (270)
99 COG0438 RfaG Glycosyltransfera 99.3 8.8E-11 1.9E-15 124.5 18.2 197 290-540 173-376 (381)
100 PRK13609 diacylglycerol glucos 99.3 5.7E-10 1.2E-14 124.1 25.0 268 178-541 94-372 (380)
101 TIGR00099 Cof-subfamily Cof su 99.3 4.2E-11 9.1E-16 126.0 14.7 70 587-660 1-71 (256)
102 PRK01158 phosphoglycolate phos 99.3 5.5E-11 1.2E-15 122.8 15.2 71 585-659 3-74 (230)
103 PRK03669 mannosyl-3-phosphogly 99.3 4.8E-11 1.1E-15 126.7 15.2 73 584-660 6-80 (271)
104 PRK00726 murG undecaprenyldiph 99.3 1.7E-10 3.6E-15 127.1 19.7 256 182-538 85-355 (357)
105 PF08282 Hydrolase_3: haloacid 99.3 8.2E-11 1.8E-15 122.0 15.4 157 588-754 1-189 (254)
106 cd01635 Glycosyltransferase_GT 99.2 2E-10 4.4E-15 115.9 16.6 111 331-482 109-220 (229)
107 cd03785 GT1_MurG MurG is an N- 99.2 7.9E-10 1.7E-14 121.1 21.6 246 182-528 83-345 (350)
108 PLN02887 hydrolase family prot 99.2 2.4E-10 5.2E-15 132.0 17.1 73 583-659 306-388 (580)
109 TIGR01487 SPP-like sucrose-pho 99.2 1.2E-10 2.6E-15 119.2 13.1 72 585-660 1-73 (215)
110 PRK10530 pyridoxal phosphate ( 99.2 2.9E-10 6.2E-15 120.5 16.0 71 585-659 3-74 (272)
111 TIGR00236 wecB UDP-N-acetylglu 99.2 1.2E-09 2.5E-14 121.0 20.9 251 177-507 76-335 (365)
112 TIGR02463 MPGP_rel mannosyl-3- 99.2 1.1E-10 2.4E-15 119.9 11.7 69 587-659 1-71 (221)
113 TIGR01482 SPP-subfamily Sucros 99.2 1.8E-10 4E-15 118.4 12.0 69 588-660 1-70 (225)
114 TIGR02471 sucr_syn_bact_C sucr 99.2 3E-10 6.5E-15 118.1 13.7 152 587-754 1-162 (236)
115 TIGR01133 murG undecaprenyldip 99.1 1.6E-09 3.6E-14 118.5 19.0 180 292-532 153-346 (348)
116 PRK13608 diacylglycerol glucos 99.1 7.2E-09 1.6E-13 115.9 23.5 270 181-545 97-376 (391)
117 cd03786 GT1_UDP-GlcNAc_2-Epime 99.1 4.8E-09 1E-13 115.6 21.7 251 177-508 78-339 (363)
118 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 5.6E-10 1.2E-14 117.5 13.6 71 587-661 1-72 (256)
119 PLN02382 probable sucrose-phos 99.1 3E-10 6.5E-15 127.2 12.0 162 580-754 4-178 (413)
120 TIGR02094 more_P_ylases alpha- 99.1 3.2E-08 6.8E-13 115.5 27.3 182 324-537 387-597 (601)
121 PRK12702 mannosyl-3-phosphogly 99.0 1.2E-09 2.5E-14 114.5 11.4 71 585-659 1-72 (302)
122 PRK14502 bifunctional mannosyl 99.0 2.9E-09 6.2E-14 122.8 15.4 73 584-660 415-488 (694)
123 PRK00192 mannosyl-3-phosphogly 99.0 2.5E-09 5.4E-14 113.7 12.4 72 584-659 3-75 (273)
124 PF13692 Glyco_trans_1_4: Glyc 98.9 2.6E-09 5.6E-14 100.4 8.1 128 326-505 2-134 (135)
125 PRK00025 lpxB lipid-A-disaccha 98.9 7.3E-08 1.6E-12 107.1 21.0 149 318-517 175-351 (380)
126 KOG1387 Glycosyltransferase [C 98.9 5.1E-07 1.1E-11 94.7 23.3 190 325-541 268-459 (465)
127 TIGR02461 osmo_MPG_phos mannos 98.9 1.8E-08 4E-13 103.9 12.6 69 587-660 1-70 (225)
128 PRK09814 beta-1,6-galactofuran 98.8 1.6E-07 3.4E-12 102.9 19.7 238 183-523 58-314 (333)
129 PF05116 S6PP: Sucrose-6F-phos 98.8 1.5E-09 3.2E-14 113.6 3.2 156 585-754 2-168 (247)
130 PF05693 Glycogen_syn: Glycoge 98.8 2.5E-06 5.3E-11 97.0 27.8 303 193-538 146-579 (633)
131 TIGR03713 acc_sec_asp1 accesso 98.8 6.4E-07 1.4E-11 103.3 22.1 238 190-508 224-490 (519)
132 cd04299 GT1_Glycogen_Phosphory 98.7 1.6E-06 3.5E-11 103.2 22.8 181 327-539 479-688 (778)
133 TIGR00215 lpxB lipid-A-disacch 98.4 1.7E-05 3.7E-10 88.6 21.4 134 325-507 190-348 (385)
134 COG3769 Predicted hydrolase (H 98.3 3.4E-06 7.3E-11 83.6 9.0 72 583-659 5-78 (274)
135 COG1519 KdtA 3-deoxy-D-manno-o 98.2 0.00052 1.1E-08 75.4 26.1 301 173-525 32-404 (419)
136 smart00775 LNS2 LNS2 domain. T 98.2 1.8E-06 3.9E-11 84.0 6.5 71 587-658 1-89 (157)
137 PF13524 Glyco_trans_1_2: Glyc 98.1 4.9E-06 1.1E-10 73.1 6.5 87 425-535 1-91 (92)
138 KOG3189 Phosphomannomutase [Li 97.9 0.00013 2.7E-09 71.5 12.4 166 579-753 5-195 (252)
139 TIGR02919 accessory Sec system 97.9 0.00015 3.2E-09 82.0 13.6 122 342-508 291-413 (438)
140 TIGR01689 EcbF-BcbF capsule bi 97.8 2.5E-05 5.5E-10 72.8 5.7 51 586-637 2-55 (126)
141 PF03332 PMM: Eukaryotic phosp 97.6 0.0005 1.1E-08 69.4 11.8 142 610-753 1-164 (220)
142 TIGR01684 viral_ppase viral ph 97.5 0.00018 3.9E-09 75.8 6.9 73 584-658 125-201 (301)
143 cd01427 HAD_like Haloacid deha 97.3 0.00023 5E-09 65.7 4.5 70 587-657 1-79 (139)
144 PHA03398 viral phosphatase sup 97.1 0.001 2.2E-08 70.3 6.5 71 584-658 127-203 (303)
145 TIGR01681 HAD-SF-IIIC HAD-supe 96.7 0.0029 6.3E-08 59.3 5.6 55 586-641 1-65 (128)
146 PRK10444 UMP phosphatase; Prov 96.6 0.0012 2.5E-08 69.4 3.0 54 585-643 1-54 (248)
147 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.6 0.0011 2.4E-08 69.9 2.8 49 586-635 2-50 (257)
148 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.6 0.0018 4E-08 67.9 4.3 65 586-655 2-73 (249)
149 TIGR01662 HAD-SF-IIIA HAD-supe 96.6 0.0028 6.1E-08 59.4 4.8 57 586-643 1-70 (132)
150 TIGR01452 PGP_euk phosphoglyco 96.5 0.0016 3.5E-08 69.5 2.9 50 585-639 2-51 (279)
151 PLN02645 phosphoglycolate phos 96.4 0.002 4.4E-08 69.9 2.9 53 584-641 27-79 (311)
152 TIGR01670 YrbI-phosphatas 3-de 96.3 0.0011 2.4E-08 64.2 0.5 58 585-643 1-65 (154)
153 PRK09484 3-deoxy-D-manno-octul 96.3 0.0023 5E-08 63.9 2.7 59 584-643 20-85 (183)
154 PF02684 LpxB: Lipid-A-disacch 96.2 0.36 7.8E-06 53.6 19.6 258 179-509 74-343 (373)
155 TIGR01672 AphA HAD superfamily 96.1 0.013 2.7E-07 61.0 7.0 63 568-631 46-139 (237)
156 KOG2941 Beta-1,4-mannosyltrans 96.0 0.21 4.6E-06 53.6 15.3 169 325-537 254-435 (444)
157 COG2179 Predicted hydrolase of 96.0 0.023 4.9E-07 54.9 7.4 66 580-649 23-88 (175)
158 PF08323 Glyco_transf_5: Starc 96.0 0.033 7.2E-07 58.3 9.4 86 178-263 118-232 (245)
159 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.0097 2.1E-07 58.5 5.0 49 584-633 12-69 (166)
160 PF13439 Glyco_transf_4: Glyco 95.2 0.064 1.4E-06 51.5 7.8 98 182-304 74-177 (177)
161 COG0763 LpxB Lipid A disacchar 94.9 1.2 2.6E-05 49.0 17.0 275 167-534 69-374 (381)
162 PF13344 Hydrolase_6: Haloacid 94.8 0.0093 2E-07 53.5 0.5 49 588-641 1-49 (101)
163 TIGR01656 Histidinol-ppas hist 94.4 0.036 7.8E-07 53.1 3.6 46 586-632 1-53 (147)
164 TIGR01668 YqeG_hyp_ppase HAD s 94.3 0.1 2.2E-06 51.4 6.7 56 583-641 23-79 (170)
165 PTZ00445 p36-lilke protein; Pr 94.3 0.076 1.7E-06 53.6 5.6 61 572-633 30-102 (219)
166 PRK11009 aphA acid phosphatase 94.0 0.1 2.2E-06 54.3 6.1 62 570-632 48-140 (237)
167 PF09419 PGP_phosphatase: Mito 94.0 0.091 2E-06 51.6 5.4 62 567-632 25-87 (168)
168 COG1778 Low specificity phosph 93.7 0.061 1.3E-06 51.4 3.4 60 582-643 5-72 (170)
169 PRK06769 hypothetical protein; 93.7 0.054 1.2E-06 53.5 3.3 50 583-633 2-55 (173)
170 TIGR03492 conserved hypothetic 93.7 0.86 1.9E-05 51.3 13.4 138 327-507 208-365 (396)
171 PF08645 PNK3P: Polynucleotide 93.7 0.058 1.2E-06 52.6 3.4 43 586-629 1-52 (159)
172 PF02350 Epimerase_2: UDP-N-ac 93.7 13 0.00028 41.0 22.3 256 175-506 55-318 (346)
173 PHA02530 pseT polynucleotide k 93.6 0.14 3E-06 55.1 6.5 58 584-642 157-223 (300)
174 TIGR00213 GmhB_yaeD D,D-heptos 93.5 0.054 1.2E-06 53.5 2.9 47 586-633 2-53 (176)
175 TIGR00338 serB phosphoserine p 92.7 0.11 2.3E-06 53.0 3.8 36 606-642 86-121 (219)
176 PRK08942 D,D-heptose 1,7-bisph 92.6 0.085 1.8E-06 52.3 2.8 48 584-632 2-55 (181)
177 PF13844 Glyco_transf_41: Glyc 92.5 1.1 2.3E-05 51.1 11.8 107 320-447 276-385 (468)
178 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.5 0.16 3.5E-06 52.9 4.8 47 584-635 7-53 (242)
179 PRK09552 mtnX 2-hydroxy-3-keto 92.2 0.21 4.7E-06 51.1 5.3 36 606-642 75-110 (219)
180 TIGR01460 HAD-SF-IIA Haloacid 92.1 0.18 3.8E-06 52.5 4.6 50 588-642 1-53 (236)
181 PLN02954 phosphoserine phospha 92.1 0.18 3.8E-06 51.7 4.5 35 607-642 86-120 (224)
182 TIGR03568 NeuC_NnaA UDP-N-acet 92.0 8 0.00017 43.0 17.9 72 404-505 264-338 (365)
183 TIGR01675 plant-AP plant acid 91.9 0.29 6.3E-06 50.5 5.8 57 584-641 76-158 (229)
184 TIGR01663 PNK-3'Pase polynucle 91.8 0.19 4.2E-06 58.1 4.9 50 583-633 166-224 (526)
185 TIGR01533 lipo_e_P4 5'-nucleot 91.6 0.15 3.2E-06 54.0 3.3 54 583-637 73-149 (266)
186 TIGR01491 HAD-SF-IB-PSPlk HAD- 91.5 0.38 8.2E-06 48.0 6.1 35 608-643 83-117 (201)
187 PRK13225 phosphoglycolate phos 91.4 0.26 5.7E-06 52.5 5.0 36 607-643 144-179 (273)
188 TIGR01686 FkbH FkbH-like domai 91.3 0.4 8.6E-06 52.3 6.5 60 584-644 2-69 (320)
189 TIGR01680 Veg_Stor_Prot vegeta 91.2 0.3 6.6E-06 51.4 5.1 74 584-658 100-197 (275)
190 TIGR01685 MDP-1 magnesium-depe 90.7 0.37 7.9E-06 47.8 4.9 57 585-642 2-82 (174)
191 TIGR01261 hisB_Nterm histidino 90.7 0.2 4.2E-06 49.0 3.0 46 585-631 1-54 (161)
192 COG0381 WecB UDP-N-acetylgluco 90.7 10 0.00022 42.0 16.3 136 326-508 205-343 (383)
193 PF13579 Glyco_trans_4_4: Glyc 90.6 0.32 6.9E-06 45.7 4.4 68 191-263 74-146 (160)
194 PRK13582 thrH phosphoserine ph 90.4 0.27 5.8E-06 49.5 3.9 34 608-643 71-104 (205)
195 PRK11133 serB phosphoserine ph 90.4 0.64 1.4E-05 50.7 7.0 36 606-642 182-217 (322)
196 PRK05446 imidazole glycerol-ph 90.4 0.3 6.5E-06 53.8 4.4 47 584-631 1-55 (354)
197 TIGR01488 HAD-SF-IB Haloacid D 90.2 0.39 8.5E-06 46.9 4.7 36 607-643 75-110 (177)
198 smart00577 CPDc catalytic doma 90.0 0.49 1.1E-05 45.4 5.1 58 584-643 1-81 (148)
199 KOG3742 Glycogen synthase [Car 88.6 11 0.00023 42.2 14.3 71 415-506 493-578 (692)
200 TIGR02726 phenyl_P_delta pheny 88.3 0.37 7.9E-06 47.5 2.9 58 585-643 7-71 (169)
201 TIGR01489 DKMTPPase-SF 2,3-dik 88.2 0.87 1.9E-05 44.8 5.6 35 607-642 74-108 (188)
202 TIGR03333 salvage_mtnX 2-hydro 88.0 0.95 2.1E-05 46.2 5.8 37 606-643 71-107 (214)
203 PRK10826 2-deoxyglucose-6-phos 87.2 0.8 1.7E-05 46.8 4.8 33 609-642 96-128 (222)
204 COG0647 NagD Predicted sugar p 86.9 0.72 1.6E-05 48.8 4.3 46 584-634 7-52 (269)
205 PF07429 Glyco_transf_56: 4-al 86.0 9.1 0.0002 41.8 12.0 135 333-505 192-332 (360)
206 PF03767 Acid_phosphat_B: HAD 85.9 0.12 2.6E-06 53.6 -2.1 76 583-659 70-168 (229)
207 TIGR01426 MGT glycosyltransfer 85.3 8.6 0.00019 42.8 12.2 96 407-532 279-384 (392)
208 PRK13222 phosphoglycolate phos 85.1 0.96 2.1E-05 46.1 4.1 36 607-643 95-130 (226)
209 cd03784 GT1_Gtf_like This fami 84.8 70 0.0015 35.5 20.1 73 404-505 290-371 (401)
210 TIGR03590 PseG pseudaminic aci 84.4 4.1 8.9E-05 43.4 8.7 92 325-447 170-261 (279)
211 TIGR01456 CECR5 HAD-superfamil 84.3 1.7 3.6E-05 47.5 5.7 48 587-638 2-55 (321)
212 PF08235 LNS2: LNS2 (Lipin/Ned 84.3 1.4 3.1E-05 42.7 4.5 55 587-642 1-66 (157)
213 COG0637 Predicted phosphatase/ 84.1 1.4 3E-05 45.4 4.7 35 607-642 88-122 (221)
214 PF03031 NIF: NLI interacting 82.8 0.99 2.1E-05 43.6 2.9 56 586-643 1-72 (159)
215 COG0560 SerB Phosphoserine pho 82.6 1.2 2.6E-05 45.6 3.5 36 605-641 77-112 (212)
216 COG3882 FkbH Predicted enzyme 82.2 3.8 8.2E-05 46.2 7.3 80 572-652 209-301 (574)
217 PLN02575 haloacid dehalogenase 81.9 1.6 3.4E-05 48.7 4.3 35 608-643 219-253 (381)
218 PLN02779 haloacid dehalogenase 81.9 0.79 1.7E-05 49.1 2.0 27 572-598 27-53 (286)
219 PLN02940 riboflavin kinase 81.4 1.7 3.8E-05 48.5 4.6 33 608-641 96-128 (382)
220 PF06941 NT5C: 5' nucleotidase 81.0 0.63 1.4E-05 46.6 0.8 29 605-634 73-101 (191)
221 PF12689 Acid_PPase: Acid Phos 80.4 2.3 4.9E-05 41.9 4.4 57 585-642 3-82 (169)
222 COG0816 Predicted endonuclease 79.9 9.1 0.0002 36.5 8.1 73 343-425 40-112 (141)
223 COG3914 Spy Predicted O-linked 79.7 10 0.00022 43.9 9.7 101 327-446 431-531 (620)
224 PRK08238 hypothetical protein; 79.3 4.1 8.9E-05 47.0 6.8 37 606-643 73-109 (479)
225 COG4359 Uncharacterized conser 79.1 2.9 6.3E-05 41.2 4.6 60 605-668 73-138 (220)
226 PF06258 Mito_fiss_Elm1: Mitoc 79.0 13 0.00027 40.5 10.0 100 325-447 146-250 (311)
227 TIGR01490 HAD-SF-IB-hyp1 HAD-s 78.7 3.2 7E-05 41.4 5.1 36 606-642 88-123 (202)
228 COG0707 MurG UDP-N-acetylgluco 78.7 36 0.00079 37.7 13.7 83 413-522 243-338 (357)
229 PRK10725 fructose-1-P/6-phosph 77.6 1.2 2.6E-05 44.0 1.6 15 584-598 4-18 (188)
230 PRK11587 putative phosphatase; 77.1 1.2 2.5E-05 45.5 1.3 16 584-599 2-17 (218)
231 TIGR02245 HAD_IIID1 HAD-superf 76.6 4 8.6E-05 41.2 5.0 58 582-641 18-79 (195)
232 TIGR02250 FCP1_euk FCP1-like p 76.3 4.7 0.0001 39.2 5.2 60 582-643 3-94 (156)
233 TIGR02251 HIF-SF_euk Dullard-l 75.6 4.8 0.0001 39.2 5.2 57 585-643 1-78 (162)
234 PRK13288 pyrophosphatase PpaX; 75.5 1.3 2.9E-05 44.8 1.3 16 584-599 2-17 (214)
235 PF06888 Put_Phosphatase: Puta 74.6 4.1 8.8E-05 42.3 4.5 38 605-642 71-109 (234)
236 TIGR02009 PGMB-YQAB-SF beta-ph 74.5 1.5 3.3E-05 43.1 1.3 15 585-599 1-15 (185)
237 PLN02770 haloacid dehalogenase 74.4 1.5 3.3E-05 45.8 1.4 17 583-599 20-36 (248)
238 PF05152 DUF705: Protein of un 74.0 7.3 0.00016 41.2 6.2 57 584-641 121-177 (297)
239 TIGR02252 DREG-2 REG-2-like, H 74.0 2.1 4.5E-05 43.0 2.2 14 586-599 1-14 (203)
240 COG0241 HisB Histidinol phosph 73.0 3.3 7.2E-05 41.1 3.3 45 585-630 5-55 (181)
241 PF12000 Glyco_trans_4_3: Gkyc 72.4 27 0.00059 34.5 9.5 51 168-220 42-94 (171)
242 TIGR01548 HAD-SF-IA-hyp1 haloa 72.1 1.6 3.6E-05 43.6 1.0 13 587-599 2-14 (197)
243 PRK11590 hypothetical protein; 71.9 2.1 4.5E-05 43.6 1.6 15 584-598 5-19 (211)
244 PRK14988 GMP/IMP nucleotidase; 71.7 2.1 4.5E-05 44.1 1.6 15 585-599 10-24 (224)
245 KOG1050 Trehalose-6-phosphate 71.6 0.2 4.4E-06 59.9 -6.6 142 571-715 175-348 (732)
246 PF00343 Phosphorylase: Carboh 71.5 1E+02 0.0023 37.2 15.6 135 325-482 443-582 (713)
247 TIGR03351 PhnX-like phosphonat 70.9 2.5 5.4E-05 42.9 2.0 15 585-599 1-15 (220)
248 PHA02597 30.2 hypothetical pro 70.9 1.9 4.2E-05 43.0 1.1 15 585-599 2-16 (197)
249 PRK10748 flavin mononucleotide 69.8 2.7 5.8E-05 43.6 1.9 16 584-599 9-24 (238)
250 PRK13223 phosphoglycolate phos 69.6 3.4 7.4E-05 43.9 2.8 16 584-599 12-27 (272)
251 TIGR02253 CTE7 HAD superfamily 69.5 5.2 0.00011 40.5 4.0 15 585-599 2-16 (221)
252 PRK02797 4-alpha-L-fucosyltran 69.4 27 0.00059 37.7 9.3 98 326-440 146-245 (322)
253 TIGR02254 YjjG/YfnB HAD superf 69.3 2.9 6.3E-05 42.4 2.1 15 585-599 1-15 (224)
254 TIGR01422 phosphonatase phosph 67.7 2.8 6E-05 43.8 1.6 15 585-599 2-16 (253)
255 COG0546 Gph Predicted phosphat 66.7 3.1 6.8E-05 42.6 1.7 16 584-599 3-18 (220)
256 PLN03243 haloacid dehalogenase 65.8 4.5 9.6E-05 42.8 2.7 18 582-599 21-38 (260)
257 PRK10563 6-phosphogluconate ph 65.5 4 8.7E-05 41.5 2.2 16 584-599 3-18 (221)
258 TIGR01993 Pyr-5-nucltdase pyri 65.1 5.3 0.00012 39.3 2.9 13 587-599 2-14 (184)
259 PRK13478 phosphonoacetaldehyde 64.6 3.5 7.6E-05 43.5 1.6 31 610-641 106-136 (267)
260 PRK13226 phosphoglycolate phos 64.0 3 6.5E-05 43.0 0.9 15 585-599 12-26 (229)
261 PRK09449 dUMP phosphatase; Pro 63.2 3.8 8.3E-05 41.7 1.5 15 584-598 2-16 (224)
262 TIGR01990 bPGM beta-phosphoglu 62.5 5.9 0.00013 38.8 2.7 26 587-619 1-26 (185)
263 TIGR01428 HAD_type_II 2-haloal 60.8 6.9 0.00015 39.0 2.9 14 586-599 2-15 (198)
264 PRK14986 glycogen phosphorylas 60.4 1.4E+02 0.003 36.7 13.9 136 325-482 542-681 (815)
265 TIGR01545 YfhB_g-proteo haloac 60.1 5.3 0.00012 40.7 1.9 33 608-641 97-130 (210)
266 KOG3120 Predicted haloacid deh 59.5 17 0.00038 37.1 5.3 21 581-601 9-29 (256)
267 PF06437 ISN1: IMP-specific 5' 58.7 23 0.00051 39.0 6.5 176 565-747 123-349 (408)
268 COG4641 Uncharacterized protei 57.5 34 0.00074 37.8 7.5 115 404-540 239-361 (373)
269 PRK01021 lpxB lipid-A-disaccha 56.7 4.1E+02 0.0089 31.7 20.4 27 416-447 482-508 (608)
270 COG4087 Soluble P-type ATPase 56.5 8.2 0.00018 36.1 2.3 48 588-641 17-64 (152)
271 TIGR01454 AHBA_synth_RP 3-amin 53.9 4.7 0.0001 40.5 0.3 27 588-617 1-27 (205)
272 PRK06698 bifunctional 5'-methy 53.7 4.4 9.5E-05 46.5 0.1 15 585-599 241-255 (459)
273 TIGR02137 HSK-PSP phosphoserin 53.4 6.1 0.00013 40.1 1.0 37 605-643 68-104 (203)
274 TIGR01549 HAD-SF-IA-v1 haloaci 52.8 6.5 0.00014 37.3 1.1 12 587-598 1-12 (154)
275 TIGR02247 HAD-1A3-hyp Epoxide 52.2 7.2 0.00016 39.3 1.4 14 585-598 2-15 (211)
276 PF13477 Glyco_trans_4_2: Glyc 52.0 23 0.0005 32.7 4.7 40 182-223 68-108 (139)
277 TIGR01493 HAD-SF-IA-v2 Haloaci 51.8 6.7 0.00014 38.1 1.0 13 587-599 1-13 (175)
278 TIGR00250 RNAse_H_YqgF RNAse H 50.7 75 0.0016 29.8 7.8 71 343-423 35-105 (130)
279 PF09949 DUF2183: Uncharacteri 50.0 40 0.00086 30.2 5.5 33 342-378 49-81 (100)
280 COG3700 AphA Acid phosphatase 49.3 24 0.00051 34.8 4.2 69 568-636 46-144 (237)
281 COG5083 SMP2 Uncharacterized p 46.1 13 0.00027 41.5 2.0 73 582-658 372-452 (580)
282 TIGR01449 PGP_bact 2-phosphogl 45.8 8.6 0.00019 38.6 0.7 11 588-598 1-11 (213)
283 KOG2882 p-Nitrophenyl phosphat 45.3 17 0.00037 38.8 2.8 56 583-643 20-75 (306)
284 cd04300 GT1_Glycogen_Phosphory 45.2 2.3E+02 0.005 34.8 12.6 136 325-482 529-668 (797)
285 COG4996 Predicted phosphatase 44.5 36 0.00078 31.9 4.4 55 586-641 1-76 (164)
286 TIGR01525 ATPase-IB_hvy heavy 43.7 27 0.00058 41.2 4.5 65 578-643 357-422 (556)
287 COG3660 Predicted nucleoside-d 43.6 2E+02 0.0044 30.5 10.1 32 192-226 72-103 (329)
288 PRK00109 Holliday junction res 43.2 1.2E+02 0.0027 28.7 8.1 70 345-424 43-112 (138)
289 COG1011 Predicted hydrolase (H 43.1 13 0.00029 37.6 1.7 18 583-600 2-19 (229)
290 PRK04128 1-(5-phosphoribosyl)- 42.0 59 0.0013 33.6 6.2 61 572-641 31-93 (228)
291 PF12710 HAD: haloacid dehalog 41.2 13 0.00027 36.5 1.1 29 612-641 96-124 (192)
292 COG1819 Glycosyl transferases, 40.8 3.6E+02 0.0079 30.4 12.8 96 408-535 289-395 (406)
293 KOG2134 Polynucleotide kinase 40.6 21 0.00045 39.4 2.7 83 583-666 73-178 (422)
294 TIGR01509 HAD-SF-IA-v3 haloaci 40.6 11 0.00025 36.5 0.7 13 587-599 1-13 (183)
295 KOG2884 26S proteasome regulat 40.2 3E+02 0.0066 28.2 10.4 45 469-517 187-236 (259)
296 KOG1615 Phosphoserine phosphat 40.0 28 0.0006 35.0 3.2 35 606-641 89-123 (227)
297 PRK09456 ?-D-glucose-1-phospha 39.2 16 0.00034 36.6 1.4 14 586-599 1-14 (199)
298 PF13419 HAD_2: Haloacid dehal 37.3 13 0.00028 35.4 0.4 11 588-598 1-11 (176)
299 PF11019 DUF2608: Protein of u 36.4 57 0.0012 34.3 5.2 67 573-640 7-115 (252)
300 COG1168 MalY Bifunctional PLP- 35.5 6.7E+02 0.015 28.0 13.3 80 360-441 157-240 (388)
301 PRK10422 lipopolysaccharide co 35.4 4.1E+02 0.0089 29.0 12.1 88 324-430 182-270 (352)
302 KOG1618 Predicted phosphatase 35.2 27 0.0006 37.6 2.5 34 585-622 35-68 (389)
303 PF13528 Glyco_trans_1_3: Glyc 34.7 1.3E+02 0.0028 32.1 7.8 81 324-447 191-271 (318)
304 PF00702 Hydrolase: haloacid d 33.6 21 0.00045 35.5 1.3 29 586-617 2-34 (215)
305 PRK14089 ipid-A-disaccharide s 33.1 1.7E+02 0.0038 32.3 8.5 137 341-536 185-346 (347)
306 TIGR01511 ATPase-IB1_Cu copper 31.5 47 0.001 39.2 4.0 61 582-643 382-442 (562)
307 COG0058 GlgP Glucan phosphoryl 31.1 2.9E+02 0.0062 33.7 10.2 130 325-482 486-616 (750)
308 TIGR02093 P_ylase glycogen/sta 30.5 2.8E+02 0.0062 34.0 10.1 136 325-482 526-665 (794)
309 PRK14985 maltodextrin phosphor 30.1 2.8E+02 0.0061 34.1 10.0 136 325-482 528-667 (798)
310 PLN02919 haloacid dehalogenase 28.2 25 0.00055 44.7 1.0 16 584-599 74-89 (1057)
311 KOG2116 Protein involved in pl 28.1 66 0.0014 37.9 4.2 76 583-659 528-614 (738)
312 PRK13587 1-(5-phosphoribosyl)- 27.8 1.6E+02 0.0034 30.6 6.7 60 571-641 148-212 (234)
313 COG2503 Predicted secreted aci 27.3 54 0.0012 34.1 2.9 58 582-640 76-157 (274)
314 TIGR01497 kdpB K+-transporting 26.1 99 0.0021 37.4 5.4 69 574-643 415-483 (675)
315 PHA03392 egt ecdysteroid UDP-g 25.3 1.1E+03 0.024 27.4 14.0 102 407-535 350-465 (507)
316 KOG0331 ATP-dependent RNA heli 24.9 3.5E+02 0.0076 31.6 9.2 91 329-432 131-225 (519)
317 TIGR00661 MJ1255 conserved hyp 24.9 1E+02 0.0022 33.2 4.9 68 414-507 239-315 (321)
318 PF03652 UPF0081: Uncharacteri 23.9 82 0.0018 29.8 3.4 70 343-422 38-108 (135)
319 KOG4626 O-linked N-acetylgluco 23.5 4.4E+02 0.0095 31.4 9.4 76 342-435 773-848 (966)
320 PF10933 DUF2827: Protein of u 23.2 5.4E+02 0.012 28.6 9.8 157 325-524 189-347 (364)
321 PRK11033 zntA zinc/cadmium/mer 22.7 1E+02 0.0022 37.9 4.7 66 577-643 540-605 (741)
322 cd03789 GT1_LPS_heptosyltransf 22.3 4.1E+02 0.0089 27.7 8.9 84 325-430 121-206 (279)
323 PF06189 5-nucleotidase: 5'-nu 21.8 1.4E+02 0.003 31.5 4.8 55 586-640 122-204 (264)
324 PRK13587 1-(5-phosphoribosyl)- 21.7 2.2E+02 0.0047 29.6 6.3 62 572-641 32-96 (234)
325 COG1576 Uncharacterized conser 21.7 2.1E+02 0.0046 27.7 5.7 40 584-632 67-106 (155)
326 KOG2670 Enolase [Carbohydrate 20.7 74 0.0016 34.3 2.5 39 128-176 272-310 (433)
327 PF04312 DUF460: Protein of un 20.6 70 0.0015 30.3 2.1 44 585-632 43-86 (138)
328 TIGR01106 ATPase-IIC_X-K sodiu 20.5 1.4E+02 0.0031 37.9 5.5 39 604-643 567-605 (997)
329 cd03309 CmuC_like CmuC_like. P 20.4 7.7E+02 0.017 26.9 10.5 28 170-199 151-178 (321)
330 cd07018 S49_SppA_67K_type Sign 20.2 1.4E+02 0.003 30.6 4.5 46 588-633 1-57 (222)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.2e-174 Score=1541.26 Aligned_cols=751 Identities=65% Similarity=1.135 Sum_probs=705.7
Q ss_pred ccccccccccc--cCCCCcc-CCCccccccCccccccccCC-CCCC---CCCCCCCCcEEEEEcCCccceeEeCCC-Cce
Q 004411 2 RSSLDLLNLIS--FDDFGTL-NRIPGVMKVPGVISEFENKS-NDGT---TTIVEPCQRRIIVANQLPVKAYYEKDS-NKW 73 (755)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~iivsnrlP~~~~~~~~~-~~~ 73 (755)
|||+|||||++ +..++++ +++|++|++||+++++++++ ++.+ +++..+.+|+||||||||+.++++++| ++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~~~~ 83 (854)
T PLN02205 4 RSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGW 83 (854)
T ss_pred hhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCCcce
Confidence 79999999999 5677766 99999999999999999876 2222 446777789999999999999987544 589
Q ss_pred EEEecCCchhHhhhhcCCC-CCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeCChHhHhhHhhccccccccccccc
Q 004411 74 GFEYDQDSLYLQLKDGFPL-ETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHY 152 (755)
Q Consensus 74 ~~~~~~~~l~~~l~~~l~~-~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~Lwpl~H~ 152 (755)
+|++++|||+++|++++.. ..+++||||+|.++++++++++.+.++++|+|+|||++++++++||+||||++|||+|||
T Consensus 84 ~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~ 163 (854)
T PLN02205 84 IFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHY 163 (854)
T ss_pred EEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhcc
Confidence 9999999999999988854 378999999998888888888878888899999999999999999999999999999999
Q ss_pred cCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh
Q 004411 153 MLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR 232 (755)
Q Consensus 153 ~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r 232 (755)
+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|+||
T Consensus 164 ~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr 243 (854)
T PLN02205 164 MLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243 (854)
T ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHh
Confidence 98887877779999999999999999999999999986799999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchh
Q 004411 233 TLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVT 312 (755)
Q Consensus 233 ~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~ 312 (755)
+||+|++||+|||+||+|||||++|++||++||+|++|+++..++|.+++.|+||+++|+++|+|||++.|...+..+++
T Consensus 244 ~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred hCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 99999999999999999999999999999999999999999888888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC--CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 004411 313 GQKVKELKEKFD--GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (755)
Q Consensus 313 ~~~~~~lr~~~~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~ 390 (755)
.+++++++++++ |+++|+||||||++|||.+||+||++||++||+|+|||+||||++|+|+++++|++++++++++|+
T Consensus 324 ~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~ 403 (854)
T PLN02205 324 EAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403 (854)
T ss_pred HHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence 999999999995 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceE
Q 004411 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (755)
Q Consensus 391 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (755)
+||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||+||+++.+.++++++.++.+ +++|+|
T Consensus 404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~--~~~gvL 481 (854)
T PLN02205 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPST--PKKSML 481 (854)
T ss_pred HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccccc--CCCCce
Confidence 999999999999999999999999999999999999999999999999999999999876666666655543 468999
Q ss_pred EEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHHHhcccccc
Q 004411 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDHLFKRC 550 (755)
Q Consensus 471 V~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~ 550 (755)
|+|||+||+++|++|++|||||++++|+||++||+||++||+.||++++++|++||+.+|+++||++|+++++++..++|
T Consensus 482 iLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~ 561 (854)
T PLN02205 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRC 561 (854)
T ss_pred EeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred cccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC
Q 004411 551 WGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG 630 (755)
Q Consensus 551 ~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG 630 (755)
|++|+|++||+++++++|++|+++.++++|+++++|+|++||||||+|..+....|+++++++|++|++++++.|+|+||
T Consensus 562 ~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSG 641 (854)
T PLN02205 562 WGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSA 641 (854)
T ss_pred cccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999977556789999999999999999999999999
Q ss_pred CChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCC
Q 004411 631 RGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHAD 710 (755)
Q Consensus 631 R~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad 710 (755)
|+++.|++||+++++++++||||++++++++..|+......+..|++.++++|+.|++++||++||.|+++++||||++|
T Consensus 642 R~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~ad 721 (854)
T PLN02205 642 RSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721 (854)
T ss_pred CCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCC
Confidence 99999999999987899999999999998776897654445678999999999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 711 ~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
|+++..|++++.+++++.+.+.++.|.+|+++|||+|+|+|||+
T Consensus 722 pd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~ 765 (854)
T PLN02205 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGL 765 (854)
T ss_pred hHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHH
Confidence 99999999999999999988888899999999999999999995
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.1e-151 Score=1335.71 Aligned_cols=662 Identities=37% Similarity=0.665 Sum_probs=604.7
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCc-chhhHHHhhhcCeeEEEEe
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTF 128 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 128 (755)
++||||||||||+.++++++ |.|+++++.|||+++|.+ + +..+++||||+|..++.+ +++.+.+ .+.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTK-ALAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHH-HhccCceEEEe
Confidence 78999999999999988654 589999999999999975 5 468999999999876653 4454544 45789999999
Q ss_pred CChHhHhhHhhccccccccccccccC-cCCC-CCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHH
Q 004411 129 LPADVHKKYYHGFCKHYLWPLFHYML-PLTA-SHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPS 206 (755)
Q Consensus 129 l~~~~~~~~y~gf~~~~Lwpl~H~~~-~~~~-~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~ 206 (755)
|+++++++||+||||++|||+|||+. +..+ ....+|+.++|++|++||++||++|+++++| +|+|||||||||+||+
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHH
Confidence 99999999999999999999999973 2111 0124688899999999999999999999987 5999999999999999
Q ss_pred HHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcC
Q 004411 207 FLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286 (755)
Q Consensus 207 ~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~g 286 (755)
|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999988543 2488999
Q ss_pred eEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 287 r~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
|.++|.++|+|||++.|...+..+++.+++++++++++++++|+||||||+.|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
|+.|+|+++++|++++.++.++|++||++||+.+|+||+|+.+.++++|+.|+|++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
. +++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+|
T Consensus 484 ~-----------------~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~ 546 (934)
T PLN03064 484 D-----------------SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTH 546 (934)
T ss_pred c-----------------CCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 7 357899999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCCC---
Q 004411 526 DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE--- 602 (755)
Q Consensus 526 ~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~--- 602 (755)
|+++|+++|+++|.++..++.. ++ .. -+.+|+.+.++++|+.+++|+|+|||||||+|+.+.
T Consensus 547 d~~~Wa~~fl~~L~~~~~~~~~-~~-----------~~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~ 611 (934)
T PLN03064 547 TAQEWAETFVSELNDTVVEAQL-RT-----------RQ---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGR 611 (934)
T ss_pred CHHHHHHHHHHHHHHHHhhhhc-cc-----------cc---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccc
Confidence 9999999999999988654321 11 01 124799999999999999999999999999997532
Q ss_pred --------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeE-cccCcCc
Q 004411 603 --------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI-CSLTRDF 673 (755)
Q Consensus 603 --------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~-~~~~~~~ 673 (755)
...|+++++++|++|++|++|.|+|+|||+.+.|++||+.+ +++++||||++++.+ +..|.+ +.+..+.
T Consensus 612 ~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~-~~~w~~~~~~~~~~ 689 (934)
T PLN03064 612 RGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHT-KGEWMTTMPEHLNM 689 (934)
T ss_pred ccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecC-CCcceeccccccch
Confidence 44688999999999999999999999999999999999987 799999999999987 458973 3334467
Q ss_pred cHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHH-HHHhcCCCeEEEecCeEEEEEeCCCCC
Q 004411 674 DWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQVCQH 752 (755)
Q Consensus 674 ~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L-~~~l~~~~~~V~sG~~~VEV~p~gvnK 752 (755)
+|++.+.++|++|+++|||++||.|+++++||||++||+++..||+++.++| +..+.+.++.|+.|+++|||+|.|+||
T Consensus 690 ~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnK 769 (934)
T PLN03064 690 DWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTK 769 (934)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCH
Confidence 8999999999999999999999999999999999999999999999999999 445567789999999999999999999
Q ss_pred CC
Q 004411 753 QS 754 (755)
Q Consensus 753 G~ 754 (755)
|+
T Consensus 770 G~ 771 (934)
T PLN03064 770 GA 771 (934)
T ss_pred HH
Confidence 95
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=4.7e-143 Score=1272.96 Aligned_cols=663 Identities=37% Similarity=0.672 Sum_probs=599.5
Q ss_pred CCCCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCc-chhhHHHhhhcCeeEEE
Q 004411 48 EPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVP 126 (755)
Q Consensus 48 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~p 126 (755)
...+||||||||||+.+++++ +|+|++++++|||+++|.+ +. ..+++||||+|.+++++ ++..+ ...+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~~-~~-~~~~~Wvgw~g~~~~~~~~~~~~-~~~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALLG-VK-EFETKWIGWPGVDVHDEIGKAAL-TESLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHHH-HH-hcCceEEEeCCCcCCcccchhHH-HHHhhcCCeEE
Confidence 467899999999999888764 3689999999999999986 44 47999999999876544 33333 34457899999
Q ss_pred EeCChHhHhhHhhcccccccccccccc-CcCCCC-CCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchH
Q 004411 127 TFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTAS-HGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVL 204 (755)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~Lwpl~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~ll 204 (755)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++++++ +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 99999999999999999999997 222221 114566789999999999999999999987 49999999999999
Q ss_pred HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEE
Q 004411 205 PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284 (755)
Q Consensus 205 p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~ 284 (755)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999875432 3779
Q ss_pred cCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEE
Q 004411 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVL 364 (755)
Q Consensus 285 ~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 364 (755)
+|+.++|.++|+|||++.|.+....+++.+...+++++++++++|++|||||+.|||.++|+||++||+++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999998877667677777788888999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeee
Q 004411 365 VQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV 444 (755)
Q Consensus 365 vqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a 444 (755)
|||++|+|+++++|+++++++++++++||.+||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh
Q 004411 445 SRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (755)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (755)
||. +++|++|+|||+|++++++ +|++|||||++++|+||.++|+|+++||+.|+++++++|+
T Consensus 398 ~g~-----------------p~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~ 460 (797)
T PLN03063 398 CQK-----------------AKKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVK 460 (797)
T ss_pred eec-----------------CCCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 987 3468999999999999994 8999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCC--
Q 004411 524 SHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-- 601 (755)
Q Consensus 524 ~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~-- 601 (755)
+||+.+|+++|+++|.++++.+.... ...+.+|+.+.+.++|++|++|+|+|||||||++..+
T Consensus 461 ~~~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~ 525 (797)
T PLN03063 461 THSAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQ 525 (797)
T ss_pred hCCHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCc
Confidence 99999999999999999887542210 1234479999999999999999999999999998754
Q ss_pred ---CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcc-cCcCccHHH
Q 004411 602 ---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICS-LTRDFDWKE 677 (755)
Q Consensus 602 ---~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~-~~~~~~w~~ 677 (755)
....|+++++++|++|+++++|.|+|+|||+.+.|++||+++ +++++||||++++.+ ++.|.... ...+.+|++
T Consensus 526 ~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~ 603 (797)
T PLN03063 526 IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVD 603 (797)
T ss_pred cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHH
Confidence 346789999999999999999999999999999999999975 699999999999976 45898543 234678999
Q ss_pred HHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHH-HhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 678 IAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLEN-VLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 678 ~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~-~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
.+.++|+.|++++||++||+|+++++||||++||+++..||+++.++|.+ .+.+.++.|+.|+++|||+|+|+|||+
T Consensus 604 ~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~ 681 (797)
T PLN03063 604 GVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGA 681 (797)
T ss_pred HHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHH
Confidence 99999999999999999999999999999999999999999999999944 556668999999999999999999995
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=1.2e-132 Score=1186.55 Aligned_cols=655 Identities=35% Similarity=0.658 Sum_probs=598.1
Q ss_pred CcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCC---cchhhHHHhhhcCeeEEEE
Q 004411 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV---DDQEEVSTILLEKFKCVPT 127 (755)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~---~~~~~~~~~~~~~~~~~pv 127 (755)
+||||||||||+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988654 479999999999999987665 4799999999976543 2223233 45678999999
Q ss_pred eCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004411 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (755)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 207 (755)
||+++++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++++ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999776 57999999999999999999999999974 9999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCe
Q 004411 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (755)
Q Consensus 208 lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr 287 (755)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||++++++++.. ..+.+.||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999987532 24789999
Q ss_pred EEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 004411 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (755)
Q Consensus 288 ~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 367 (755)
.++|.++|+|||++.|.+....+++.+..+++|+.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999887767777777788888899999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 368 ~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
+.|+|.+.++|+++++++.+++++||++||..+|.||+++.+.++++|++++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99999877999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCH
Q 004411 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (755)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (755)
+ ++|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|+++++++|.+||+
T Consensus 387 ~-----------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~ 449 (726)
T PRK14501 387 D-----------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDV 449 (726)
T ss_pred C-----------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3 46899999999999999899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCC--CCCCC
Q 004411 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKR 605 (755)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~--~~~~~ 605 (755)
..|+++|++++.++++.+... . ...++.|+.+.+.++|+.+++|+|++||||||++.. +....
T Consensus 450 ~~w~~~~l~~l~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~ 514 (726)
T PRK14501 450 HKWASDFLDELREAAEKNKAF-----------A----SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAV 514 (726)
T ss_pred HHHHHHHHHHHHHHHhhhhcc-----------c----cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCC
Confidence 999999999999987765321 0 123567899999999999999999999999999854 24567
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHH
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKL 685 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~ 685 (755)
|+++++++|++|++++++.|+|+|||++..|+++|+.++ +++|||||++++.+ ++.|.... ..+..|++.+.++++.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~-l~liaenG~~i~~~-~~~w~~~~-~~~~~w~~~v~~il~~ 591 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLP-IHLVAEHGAWSRAP-GGEWQLLE-PVATEWKDAVRPILEE 591 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCC-eEEEEeCCEEEeCC-CCceEECC-CcchhHHHHHHHHHHH
Confidence 899999999999998999999999999999999998764 89999999999876 45787643 2367899999999999
Q ss_pred HhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 686 YTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 686 y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
|.++++|+++|+|+.+++|||++++++++..+++++.++++..+.+.++.+++|+++|||+|+++|||+
T Consensus 592 ~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~ 660 (726)
T PRK14501 592 FVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGR 660 (726)
T ss_pred HHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHH
Confidence 999999999999999999999999999998899999999999888888999999999999999999985
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-123 Score=1065.38 Aligned_cols=657 Identities=52% Similarity=0.905 Sum_probs=620.5
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeC
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 129 (755)
..|+|+|||+||+.+.+..+++.|.|+++.+||+.++.+++. .++..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 569999999999998766667799999999999999988766 5889999999988888999999999999999999999
Q ss_pred ChHhHhhHhhcccccccccccccc-CcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHH
Q 004411 130 PADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFL 208 (755)
Q Consensus 130 ~~~~~~~~y~gf~~~~Lwpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~l 208 (755)
+++...++|++|||++|||+|||+ .+..+... .|+.+.|.+|+.+|+.||++++++++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999998 56655543 67889999999999999999999999 5799999999999999999
Q ss_pred HhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeE
Q 004411 209 RKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288 (755)
Q Consensus 209 r~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~ 288 (755)
|++..+++||||+|+|||++|+|||+|.|++||++|+++|+|||||++|+|||++||.|+++++..++.+...+.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777889999999
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 368 (755)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+.+++.||+++|++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccC
Q 004411 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (755)
Q Consensus 369 ~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 448 (755)
.|++++++++++++.++..++++||++||+..++||+++...++..++.|+|.+||||++++++|||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCH
Q 004411 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (755)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (755)
+.+++|+|||+|+++++ +++++|||||.+++|.+|..+|+|+.+|+..|+.++++++..|+.
T Consensus 399 -----------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~ 461 (732)
T KOG1050|consen 399 -----------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDV 461 (732)
T ss_pred -----------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhH
Confidence 46899999999999999 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCC
Q 004411 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPS 607 (755)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~ 607 (755)
.+|+..|++.+. ++|+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+.+..+..
T Consensus 462 ~~W~~~~~~~l~---------~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~---- 521 (732)
T KOG1050|consen 462 VYWAKSFLQGLK---------RIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK---- 521 (732)
T ss_pred HHHHHHHHHhhh---------hhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch----
Confidence 999999998443 5677777 77776654 888999999999999999999999999854332
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHHHh
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYT 687 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ 687 (755)
++..|+.||+||+|+|+|+|||++..|++|+..++++|++||||+++|++++ |++.. .+.+|++.++++|++|+
T Consensus 522 --~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ 595 (732)
T KOG1050|consen 522 --AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYT 595 (732)
T ss_pred --HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999865 99875 68999999999999999
Q ss_pred cCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 688 ETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 688 ~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
++|||||+|.|+++++|||++|||++|..||+|+.++|+. .+.++.|+.|++.|||+|.|+|||.
T Consensus 596 ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~ 660 (732)
T KOG1050|consen 596 ERTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGL 660 (732)
T ss_pred hcCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHH
Confidence 9999999999999999999999999999999999999998 7889999999999999999999986
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=9.8e-120 Score=999.69 Aligned_cols=456 Identities=29% Similarity=0.516 Sum_probs=419.3
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeC
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 129 (755)
++||||||||+|+... + +.++|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|
T Consensus 1 m~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 1 MSRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecC
Confidence 3699999999996321 1 3456899999998775 4799999999964322 2223333346799999999
Q ss_pred ChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHH
Q 004411 130 PADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLR 209 (755)
Q Consensus 130 ~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr 209 (755)
+++++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999765 5799999999999999999999999997 5999999999999999999
Q ss_pred hhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEE
Q 004411 210 KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV 289 (755)
Q Consensus 210 ~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~ 289 (755)
+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999875322 2467889999
Q ss_pred EEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
+|.++|+|||++.|...+..+ +..++++++++++++++|+|||||||+|||.++|+||++||++||+|+|||+|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999998877655 4667888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCC
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~ 449 (755)
|+|+++++|++++++++++|++||++||+.+|+||+|+++.++++++.|+|++||||+|||+|||||||++||+|||.+
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHH
Q 004411 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (755)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 529 (755)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+
T Consensus 378 ---------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~ 442 (474)
T PRK10117 378 ---------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINH 442 (474)
T ss_pred ---------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 004411 530 WAKSIDQDLERACR 543 (755)
Q Consensus 530 W~~~~l~~l~~~~~ 543 (755)
|+++||.+|.+...
T Consensus 443 W~~~fL~~L~~~~~ 456 (474)
T PRK10117 443 WQECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998753
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=2.1e-118 Score=999.98 Aligned_cols=462 Identities=26% Similarity=0.451 Sum_probs=426.1
Q ss_pred EEcCCccceeEeCCCC-ceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCC-cch-hhHHHhhhcCeeEEEEeCChH
Q 004411 56 VANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV-DDQ-EEVSTILLEKFKCVPTFLPAD 132 (755)
Q Consensus 56 vsnrlP~~~~~~~~~~-~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 132 (755)
||||||+.++++++|+ +|.+++++|||+++|.+.+.+..+++||||+|...++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999866542 5888999999999999877655789999999965321 111 112222245799999999999
Q ss_pred hHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhc
Q 004411 133 VHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF 212 (755)
Q Consensus 133 ~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~ 212 (755)
++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.+++ +|+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5799999999999999999999999987 5999999999999999999999
Q ss_pred CCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCc--------------
Q 004411 213 HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRG-------------- 278 (755)
Q Consensus 213 ~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~-------------- 278 (755)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred ---eeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhC
Q 004411 279 ---YIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355 (755)
Q Consensus 279 ---~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~ 355 (755)
.+++.|+||+++|+++|+|||++.|.+.+.++++.+.++++|++++++++|++|||||++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 13478999999999999999999999888888888888999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCC
Q 004411 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGM 435 (755)
Q Consensus 356 P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~ 435 (755)
|+++||++|||||.|+|++.++|++++++++++|++||++||+.+|+||+|+++.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 004411 436 NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRH 515 (755)
Q Consensus 436 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~ 515 (755)
|||++|||||+++ ++||||+|||+||++++.+|++|||||++++|+||.+||+||.+||+.|+
T Consensus 395 NLVa~Eyva~~~~-----------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~ 457 (487)
T TIGR02398 395 NLVAKEYVAAQGL-----------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARM 457 (487)
T ss_pred CcchhhHHhhhcC-----------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999873 46899999999999999999999999999999999999999999999999
Q ss_pred HHHhhHhhhcCHHHHHHHHHHHHHH
Q 004411 516 EKHYKYISSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 516 ~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (755)
++++++|.+||+.+|+++||.+|..
T Consensus 458 ~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 458 REMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 9999999999999999999998864
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=1.1e-118 Score=1004.90 Aligned_cols=467 Identities=42% Similarity=0.803 Sum_probs=358.1
Q ss_pred cEEEEEcCCccceeEeCCCCc--eEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcc--hhhHHHhhhcCeeEEEE
Q 004411 52 RRIIVANQLPVKAYYEKDSNK--WGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD--QEEVSTILLEKFKCVPT 127 (755)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~--~~~~~~~~~~~~~~~pv 127 (755)
|+||||||||+.++++++.|. |+++.+.|||+++|.+.+. ..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999998874455 8888899999999976444 479999999998776544 55566677899999999
Q ss_pred eCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004411 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (755)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 207 (755)
||+++++++||+||||++|||+|||.++..+ ....|+.+.|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-DLARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999876212 226899999999999999999999999996 59999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCe
Q 004411 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (755)
Q Consensus 208 lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr 287 (755)
||+++|+++||||||+|||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6899999
Q ss_pred EEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 288 ~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
.++|.++|+|||++.|...+.++++.+++++|++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999988888999999999999988 49999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||++||+|||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+|
T Consensus 397 ~~-----------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~ 459 (474)
T PF00982_consen 397 DD-----------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREH 459 (474)
T ss_dssp -T-----------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT
T ss_pred cC-----------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhC
Confidence 73 579999999999999997 679999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 004411 526 DVAYWAKSIDQDLER 540 (755)
Q Consensus 526 ~~~~W~~~~l~~l~~ 540 (755)
|+.+|+++||++|++
T Consensus 460 ~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 460 DVQWWAESFLRDLKR 474 (474)
T ss_dssp -HHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhC
Confidence 999999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-113 Score=938.26 Aligned_cols=467 Identities=39% Similarity=0.662 Sum_probs=431.3
Q ss_pred CCCCCCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEE
Q 004411 46 IVEPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCV 125 (755)
Q Consensus 46 ~~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (755)
+.....|+||||||+|+...+..+++...+..++|||+++|...+. ..+++|+||+|...++++.....+....++...
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~-~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~ 88 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLR-VDGGTWIGWSGTTGPTDESSDDLKERIGEFTSA 88 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhH-hhcceEEecCceeccccccchhhhhccccceEE
Confidence 4567789999999999998765666678889999999999977544 589999999997664333223333445689999
Q ss_pred EEeCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHH
Q 004411 126 PTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLP 205 (755)
Q Consensus 126 pv~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp 205 (755)
||+++.+++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++++++ +|+||||||||+|+|
T Consensus 89 ~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P 162 (486)
T COG0380 89 PVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVP 162 (486)
T ss_pred EEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhH
Confidence 9999999999999999999999999999875 5799999999999999999999999997 599999999999999
Q ss_pred HHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEE--
Q 004411 206 SFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD-- 283 (755)
Q Consensus 206 ~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~-- 283 (755)
+|||++.|+++||||||+|||++|+|+|||+|++||+|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~ 237 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFN 237 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred -EcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCc
Q 004411 284 -YFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGK 361 (755)
Q Consensus 284 -~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~ 361 (755)
++|+.+++..+|+|||+..|.....++.+..+..++++.+.+ +++|+||||+|++||+.++++||++||++||+|+||
T Consensus 238 ~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~k 317 (486)
T COG0380 238 GADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGK 317 (486)
T ss_pred ccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCc
Confidence 447999999999999999999998888888888999998876 999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCcccee
Q 004411 362 VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 362 vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~E 441 (755)
|+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++|||+++||+|||||||++|
T Consensus 318 vvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakE 397 (486)
T COG0380 318 VVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKE 397 (486)
T ss_pred eEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (755)
|+||+. +++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||++|++++++.
T Consensus 398 yVa~q~-----------------~~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~ 460 (486)
T COG0380 398 YVAAQR-----------------DKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQ 460 (486)
T ss_pred HHHhhc-----------------CCCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999987 357999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCHHHHHHHHHHHHHHH
Q 004411 522 ISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 522 v~~~~~~~W~~~~l~~l~~~ 541 (755)
|.+||+++|+++|+.+|.+.
T Consensus 461 v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 461 VLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=3.6e-107 Score=915.18 Aligned_cols=454 Identities=39% Similarity=0.686 Sum_probs=420.7
Q ss_pred cEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCc-chhhHHHhhhcCeeEEEEeCC
Q 004411 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTFLP 130 (755)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~pv~l~ 130 (755)
||||||||+|+.+.++ + ++.+.|||+++|.+.+. ..+++||||+|...+++ ++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988653 1 56678999999988766 46999999999765433 234444556788999999999
Q ss_pred hHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHh
Q 004411 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (755)
Q Consensus 131 ~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 210 (755)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++++++ +|+|||||||||++|.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999998654 5799999999999999999999999987 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEE
Q 004411 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (755)
Q Consensus 211 ~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (755)
+.|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 3678899999
Q ss_pred EEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 004411 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (755)
Q Consensus 291 i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 370 (755)
|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999877777777777889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCC
Q 004411 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (755)
Q Consensus 371 ~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 450 (755)
+|+++++|+++++++++++++||++||..+|.||+++++.++++++.++|++|||||+||++||||||++||||||.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHH
Q 004411 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (755)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (755)
..|++|+|+++|+++.+.+|++|||+|++++|+||.++|+|+.+||+.|+++++++|.+||+.+|
T Consensus 382 ---------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 446 (456)
T TIGR02400 382 ---------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446 (456)
T ss_pred ---------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 34899999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 004411 531 AKSIDQDLE 539 (755)
Q Consensus 531 ~~~~l~~l~ 539 (755)
+++|+.+|.
T Consensus 447 ~~~~l~~l~ 455 (456)
T TIGR02400 447 REDFLSDLN 455 (456)
T ss_pred HHHHHHHhh
Confidence 999999875
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=1.9e-97 Score=841.86 Aligned_cols=459 Identities=42% Similarity=0.759 Sum_probs=424.6
Q ss_pred cEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeCCh
Q 004411 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPA 131 (755)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 131 (755)
|+||||||+|+.++++++ |.|+++++.|||+.+|.+.+. ..+++||||++...+..+.+.+.+....+|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 589999999999999987555 479999999998766544434556677899999999999
Q ss_pred HhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhh
Q 004411 132 DVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKR 211 (755)
Q Consensus 132 ~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~ 211 (755)
++++.||+||||++|||+|||+.+. .+|+.++|++|++||++||++|++.+++ +|+||||||||+++|.++|++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999776 5799999999999999999999999997 599999999999999999999
Q ss_pred cCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEE
Q 004411 212 FHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291 (755)
Q Consensus 212 ~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i 291 (755)
.++++||||+|||||++|+|+++|++++|+++|++||+|||||++|++||+++|+++++.+.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886542 357899999999
Q ss_pred EEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 004411 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (755)
Q Consensus 292 ~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 371 (755)
.++|+|||++.|.+....++..+..++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999987765555555556667777899999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCc
Q 004411 372 RSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (755)
Q Consensus 372 r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 451 (755)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~---- 385 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD---- 385 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec----
Confidence 9999999999999999999999999988899999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHH
Q 004411 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531 (755)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 531 (755)
+++|++|+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.++++++++|.++|+..|+
T Consensus 386 -------------p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~ 452 (460)
T cd03788 386 -------------DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWA 452 (460)
T ss_pred -------------CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 3468999999999999888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004411 532 KSIDQDL 538 (755)
Q Consensus 532 ~~~l~~l 538 (755)
++|+.+|
T Consensus 453 ~~~l~~l 459 (460)
T cd03788 453 NSFLDDL 459 (460)
T ss_pred HHHHHhh
Confidence 9999887
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=2.9e-31 Score=315.09 Aligned_cols=509 Identities=15% Similarity=0.132 Sum_probs=312.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh-----------------cCCChHHH-HHHhhhCCEEEE
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----------------TLPVRDEI-LKSLLNSDLIGF 252 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----------------~lp~~~~i-l~~ll~~Dligf 252 (755)
.|+||-|+++-..++..|++++ ++|.+++.|+. ..+-++ .++.|-+. -..+-.||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 3999999999889988898876 68999999973 112111 01222221 123677899999
Q ss_pred eCHHHHHHHHHHH-------hhHhCccccccCceeEEEEcCe-EEEEEEEeccCCcccccccccCchh------------
Q 004411 253 HTFDYARHFLSSC-------SRMLGLNYESKRGYIGLDYFGR-TVSIKILPVGIHMGQFESIMSLDVT------------ 312 (755)
Q Consensus 253 ~t~~~~~~Fl~~~-------~r~lg~~~~~~~~~~~i~~~gr-~~~i~v~p~GId~~~f~~~~~~~~~------------ 312 (755)
.|......-...- .|.|.. ...+| +.++|+ .-++.|+|+|||+++|.+.....+.
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~--~~~~g---v~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~ 462 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA--RARRG---VSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKP 462 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh--hhccc---ccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccc
Confidence 8887766433210 011100 01111 233332 2388999999999999874211110
Q ss_pred -HHHHHHHHHHc--CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchh----HHHHHHHH
Q 004411 313 -GQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKD----VQDLLSDT 385 (755)
Q Consensus 313 -~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~----~~~l~~~i 385 (755)
.....++++.+ +++++||+|||+++.||+..+|+||..+.+..+.. ++++ ++|... ...+ ......++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSV 537 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHH
Confidence 00112344433 57899999999999999999999999986543321 2333 345321 1111 11234566
Q ss_pred HHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhC----cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCC
Q 004411 386 NRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (755)
Q Consensus 386 ~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 461 (755)
..++++.+.. + .|.| .++++.++++++|+.| ||||+||.+||||++++||||||.
T Consensus 538 ~~li~~lgL~-g-----~V~F-lG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-------------- 596 (1050)
T TIGR02468 538 LKLIDKYDLY-G-----QVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-------------- 596 (1050)
T ss_pred HHHHHHhCCC-C-----eEEe-cCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC--------------
Confidence 6676665432 2 3554 5689999999999998 699999999999999999999975
Q ss_pred CCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 462 NPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 462 ~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.+ +.++...+..++.+.+++|..-++.+++.+
T Consensus 597 -------PVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i 668 (1050)
T TIGR02468 597 -------PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRI 668 (1050)
T ss_pred -------CEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 899999999998883 599999999999999999999864 456666677888899999999999999888
Q ss_pred HHHHHhccc-cccc-----c-----cC--------CCcceeEeec----Cc--cc-cccCh----HHHHH----------
Q 004411 539 ERACRDHLF-KRCW-----G-----VG--------LGLGFRIVAL----GP--EF-RKLGM----HHIAS---------- 578 (755)
Q Consensus 539 ~~~~~~~~~-~~~~-----~-----~g--------~g~~~~~~~~----~~--~f-~~l~~----~~i~~---------- 578 (755)
......+.. ++.. . .+ +++++.+-.- .. +. ..++. ..|.+
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 669 ASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred HHHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 876544311 0000 0 01 0011110000 00 00 00000 01111
Q ss_pred -------------Hhh--ccCceEEE--ecCCCcCCCCCCCCCCCCHHHHHHHHHHhc---CCCCcEEEEcCCChhhHHh
Q 004411 579 -------------AYN--KTNSRLIL--LDYDGTVMPQTSEDKRPSTEVLSILNDLCN---DPKNAVFIVSGRGKDSLGN 638 (755)
Q Consensus 579 -------------~y~--~s~~rlI~--lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~---d~~~~V~IvSGR~~~~L~~ 638 (755)
.|. .-.+++|+ +|+|+| +. ..+.+.++++.+.+ .....++++|||+.+.+.+
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~ 820 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQS 820 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHH
Confidence 111 11245666 999999 32 12344445555542 2235578999999999999
Q ss_pred hhcC--CC--C-ceEEcCCceEEEecC-----CCceeEc---ccCcCccH-HHHHHHHHHHHhcCC--------CCcEEe
Q 004411 639 WFSG--VE--K-LGLSAEHGYFTRWSK-----NSAWEIC---SLTRDFDW-KEIAEPVMKLYTETT--------DGSFIE 696 (755)
Q Consensus 639 ~f~~--i~--~-l~liaenGa~i~~~~-----~~~w~~~---~~~~~~~w-~~~v~~i~~~y~~~t--------~gs~iE 696 (755)
.+.. +| . -.+||.-|+.|+++. +..|..- ...++..| .+.+++.+..+.... ++...+
T Consensus 821 ~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q 900 (1050)
T TIGR02468 821 FLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEE 900 (1050)
T ss_pred HHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceec
Confidence 8853 33 2 237999999999862 1223310 11345678 466776665554321 333444
Q ss_pred ecc----eEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEE--ecCeEEEEEeCCCCCCC
Q 004411 697 DKE----TAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVK--RGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 697 ~k~----~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~--sG~~~VEV~p~gvnKG~ 754 (755)
..+ ++++|...+ ++.. ...+++.+.|+.. +....++ ++..+++|.|..+|||.
T Consensus 901 ~~~~q~~~k~SY~v~d--~~~~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgq 959 (1050)
T TIGR02468 901 DEESSTDHCYAFKVKD--PSKV-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQ 959 (1050)
T ss_pred ChhhCCCceEEEEecC--cccC-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHH
Confidence 333 344444232 2221 2345666666543 3344443 44599999999999983
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.9e-30 Score=263.60 Aligned_cols=179 Identities=33% Similarity=0.516 Sum_probs=154.7
Q ss_pred cChHHHHHHhhccCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceE
Q 004411 571 LGMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (755)
Q Consensus 571 l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~l 648 (755)
+....+.+.|..+++++|++||||||+++. |....|+++++++|++|+++++|.|+|+|||+...+++|++ ++++++
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l 82 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGL 82 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccE
Confidence 345567788999999999999999999876 46788999999999999999999999999999999999998 889999
Q ss_pred EcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHH
Q 004411 649 SAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENV 728 (755)
Q Consensus 649 iaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~ 728 (755)
|||||++++.+.+.-|....+..+..|++.+.+++++|.+++||+|||.|++++.||||+++++.+..++.+......
T Consensus 83 ~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~-- 160 (266)
T COG1877 83 IAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLI-- 160 (266)
T ss_pred EEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhcc--
Confidence 999999998876666776655666889999999999999999999999999999999999987765544443333332
Q ss_pred hcCCC-eEEEecCeEEEEEeCCCCCCC
Q 004411 729 LANEP-VVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 729 l~~~~-~~V~sG~~~VEV~p~gvnKG~ 754 (755)
+.. ++|+.|+++|||+|.++|||.
T Consensus 161 --~~~~~~v~~gk~vVEvrp~~~~KG~ 185 (266)
T COG1877 161 --NELKLRVTPGKMVVELRPPGVSKGA 185 (266)
T ss_pred --ccccEEEEeCceEEEEeeCCcchHH
Confidence 222 899999999999999999995
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.95 E-value=1.5e-28 Score=255.15 Aligned_cols=165 Identities=38% Similarity=0.680 Sum_probs=123.4
Q ss_pred EecCCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeE
Q 004411 589 LLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (755)
Q Consensus 589 ~lD~DGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~ 666 (755)
||||||||+|+.+ ....|++++.++|++|+++++|.|+|+|||+.+.++.++ .+++++++||||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~-~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG-GIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc-CCCCceEEEEeeEEeccCccccccc
Confidence 6999999999764 567899999999999999999999999999999965555 5789999999999999997767775
Q ss_pred cccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCC-CeEEEecCeEEEE
Q 004411 667 CSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQHIVEV 745 (755)
Q Consensus 667 ~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~-~~~V~sG~~~VEV 745 (755)
.....+..|++.+.++++++.++++|++||+|+++++||||+++++++..+++++.+++.+.+... ++.++.|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 444566789999999999999999999999999999999999999999999999999999877665 8999999999999
Q ss_pred EeCCCCCCC
Q 004411 746 KPQVCQHQS 754 (755)
Q Consensus 746 ~p~gvnKG~ 754 (755)
+|.++|||+
T Consensus 160 rp~~~~KG~ 168 (235)
T PF02358_consen 160 RPPGVNKGS 168 (235)
T ss_dssp E-TT--HHH
T ss_pred EeCCCChHH
Confidence 999999985
No 15
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=5e-25 Score=243.93 Aligned_cols=301 Identities=18% Similarity=0.158 Sum_probs=209.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhh
Q 004411 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL 245 (755)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll 245 (755)
...+..|...++.++.++.... +.|+||+|+++.+.++...+. .++|++++.|+++.... . .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~--~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~---~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDL--DADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-R---RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccC--CCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-H---HHHHHHHHHHH
Confidence 4467888888888876533332 349999999998777666543 36788899999875321 0 01122223345
Q ss_pred hCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--
Q 004411 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (755)
Q Consensus 246 ~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 323 (755)
.+|.+.+.+.++++. + +..+ ++ ++|+|||+........ .......+++++
T Consensus 135 ~~d~~i~~~~~~~~~-----------------~-----~~~~--~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPP-----------------Q-----VPPR--KV-IIPPSIDPLSGKNREL---SPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCC-----------------C-----CCCc--eE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCC
Confidence 577777665322211 0 1111 23 8999999764221111 112234455666
Q ss_pred -CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 324 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
.++++|++|||+++.||+..+++|++.+.+++|+++ |+++|..... .++..++. +++.++.+.. .
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~---~~~~~~~~~~------~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVY---EEVLEYAEGD------P 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHH---HHHHHHhCCC------C
Confidence 478899999999999999999999999988888866 8888864321 12222322 2333222211 1
Q ss_pred cEEEecCC-CChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc
Q 004411 403 PIVIIKEP-LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (755)
Q Consensus 403 pV~~~~~~-v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (755)
.|.+++.. ++.+++.++|++||+|++||.+||||++++||||||. |+|+|..+|..+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~---------------------Pvv~s~~~~~~~~ 311 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK---------------------PVIAGPVGGIPLQ 311 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC---------------------CEEEcCCCCchhh
Confidence 37766543 4899999999999999999999999999999999975 8999999998888
Q ss_pred cC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 482 LS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 482 l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
+. +|++++ +.+++|++|.++++++ ++++.+.++.++++. .+++...++++++.+++
T Consensus 312 i~~~~~g~~~~--~~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 312 IEDGETGFLVD--TVEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cccCCceEEeC--CcHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 73 478887 4678999999999864 566777778888874 78999999999877654
No 16
>PLN02939 transferase, transferring glycosyl groups
Probab=99.94 E-value=2.7e-24 Score=252.40 Aligned_cols=317 Identities=14% Similarity=0.139 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhh-----cCCCeEEEEEecC-----CCchhhh-hcCCCh-
Q 004411 171 AYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSP-----FPSSEIY-RTLPVR- 237 (755)
Q Consensus 171 ~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~-r~lp~~- 237 (755)
.|.-..+..++.+... .+| ||||+||||..++|.++.+. +.++++.|++|.- ||...+. ..+|+.
T Consensus 592 RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 3443444444433332 234 89999999999985544432 4568999999965 3322211 112211
Q ss_pred --------------HHHH-HHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCccc
Q 004411 238 --------------DEIL-KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302 (755)
Q Consensus 238 --------------~~il-~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~ 302 (755)
-.++ .++..||.|..-++.|++.-++ .---|++. .+..+..++.+||||||++.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehhh
Confidence 1123 3567799999999999988664 11111110 12234568889999999999
Q ss_pred ccccccC-----------chhHHHHHHHHHHcC------CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEE
Q 004411 303 FESIMSL-----------DVTGQKVKELKEKFD------GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (755)
Q Consensus 303 f~~~~~~-----------~~~~~~~~~lr~~~~------~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 365 (755)
|.+.... .........++++++ +.++|++|||+++.||+..+++|+.++++ ++ +.||
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLV 812 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFV 812 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEE
Confidence 9874310 001112345777772 35899999999999999999999998875 33 3488
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeec
Q 004411 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (755)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~ 445 (755)
++|. |++ ..+++++..++.+++.. ..|.|+ +..+......+|+.||+||+||.+|||||+++|||+|
T Consensus 813 IvGd-----Gp~-~~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy 879 (977)
T PLN02939 813 LLGS-----SPV-PHIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY 879 (977)
T ss_pred EEeC-----CCc-HHHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC
Confidence 7773 322 13456677777665321 136665 4567777789999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC------------CcEEeCCCCHHHHHHHHHHHhc---CCHHH
Q 004411 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ---MENQE 510 (755)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~VnP~d~~~~A~ai~~aL~---m~~~e 510 (755)
|. |+|++..+|..+.+. +|++++|.|+++++++|.+++. ..++.
T Consensus 880 Gt---------------------PPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~ 938 (977)
T PLN02939 880 GS---------------------VPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEV 938 (977)
T ss_pred CC---------------------CEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHH
Confidence 64 788999999987661 4899999999999999999986 23444
Q ss_pred HHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHH
Q 004411 511 KILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (755)
Q Consensus 511 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 542 (755)
++.+.++. ....++|...++.|++-..++.
T Consensus 939 ~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 939 WKQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 44333322 2357899999999887766654
No 17
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.93 E-value=1.8e-24 Score=246.80 Aligned_cols=296 Identities=18% Similarity=0.195 Sum_probs=198.6
Q ss_pred CCEEEEeCCccchHHHHHHhhc----CCCeEEEEEecCCCc----hhhhhcC--CC-------------hHHHHHHhhhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRF----HRVKVGFFLHSPFPS----SEIYRTL--PV-------------RDEILKSLLNS 247 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP~----~e~~r~l--p~-------------~~~il~~ll~~ 247 (755)
-|+||.||+|..++|.+++++. .++|++++.|..-.. .+.+..+ |. ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 4999999999999999998663 468999999986211 1111111 11 01112345667
Q ss_pred CEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC-----------chhHHHH
Q 004411 248 DLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKV 316 (755)
Q Consensus 248 Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~ 316 (755)
|.|...+..+++..... ..|. | +.-.+..+..++.++|+|||++.|.+.... ....+..
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~------g-l~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 268 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY------G-LEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENK 268 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc------C-hHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHH
Confidence 77766666665543210 0000 0 000011234578899999999998764210 0111223
Q ss_pred HHHHHHcC----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 004411 317 KELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (755)
Q Consensus 317 ~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~I 392 (755)
+.++++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|. ++ ..+++++++++.+.
T Consensus 269 ~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~-----g~--~~~~~~l~~l~~~~ 335 (466)
T PRK00654 269 RALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGT-----GD--PELEEAFRALAARY 335 (466)
T ss_pred HHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEec-----Cc--HHHHHHHHHHHHHC
Confidence 45677663 568999999999999999999999998753 3 44887773 22 12455677777654
Q ss_pred hcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE
Q 004411 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (755)
Q Consensus 393 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (755)
+. .|.++.+. +.+....+|+.||+||+||.+||||++.+|||+||. |+|+
T Consensus 336 ~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~---------------------p~V~ 385 (466)
T PRK00654 336 PG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGT---------------------LPIV 385 (466)
T ss_pred CC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCC---------------------CEEE
Confidence 31 25555443 566677999999999999999999999999999964 8899
Q ss_pred eCCCCccccc-C--------CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 473 SEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 473 Se~~G~~~~l-~--------~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
|..+|+.+.+ . +|++|+|.|+++++++|.++++.. ++.++.+.++.. ...++|..-++++++-.+++
T Consensus 386 ~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 386 RRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred eCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999999987 2 389999999999999999998732 222333322222 25678888888887766554
No 18
>PLN02316 synthase/transferase
Probab=99.93 E-value=6.6e-24 Score=253.45 Aligned_cols=308 Identities=12% Similarity=0.085 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhh-----cCCCeEEEEEecCCCchhhhhcCCChHHHHH
Q 004411 169 WQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242 (755)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~r~lp~~~~il~ 242 (755)
..-|...++..++.+... .+| ||||+||+|..++|.++++. +.+++++++.|..-. ....+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHH
Confidence 344554555555544332 234 99999999999999999875 356899999996421 1122335
Q ss_pred HhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC--c-----h----
Q 004411 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL--D-----V---- 311 (755)
Q Consensus 243 ~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~--~-----~---- 311 (755)
++..||.|.--+..|++..+.. .. ...+..++.+||+|||++.|.+.... + +
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~----~~-------------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN----SA-------------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc----cC-------------cccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 6788999999999888776531 00 01123578899999999988764210 0 0
Q ss_pred -hHHHHHHHHHHcC----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHH
Q 004411 312 -TGQKVKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTN 386 (755)
Q Consensus 312 -~~~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~ 386 (755)
.......++++++ +.++|++||||++.||+..+++|+.++++. + +.||++|. |++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHHH
Confidence 0122345777772 578999999999999999999999999863 3 34777773 333 24567788
Q ss_pred HHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCC
Q 004411 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQK 466 (755)
Q Consensus 387 ~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~ 466 (755)
+++.+++..+.. .|.|.. ..+......+|++||+||+||..|||||+.+|||+||.
T Consensus 889 ~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt------------------- 944 (1036)
T PLN02316 889 NLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS------------------- 944 (1036)
T ss_pred HHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC-------------------
Confidence 888877654421 366543 33343334799999999999999999999999999975
Q ss_pred CceEEEeCCCCccccc-C---------------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHH
Q 004411 467 KSVIIVSEFIGCSPSL-S---------------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAY 529 (755)
Q Consensus 467 ~g~lV~Se~~G~~~~l-~---------------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~ 529 (755)
|+|+|..+|..+.+ + +|++|+|.|+++++++|.++|......+....+..++.+ ..++|..
T Consensus 945 --ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~ 1022 (1036)
T PLN02316 945 --IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNR 1022 (1036)
T ss_pred --CeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHH
Confidence 78889999999887 2 489999999999999999999865333333333445544 4589999
Q ss_pred HHHHHHHHHHHHH
Q 004411 530 WAKSIDQDLERAC 542 (755)
Q Consensus 530 W~~~~l~~l~~~~ 542 (755)
=++.|++-..++.
T Consensus 1023 ~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1023 PALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHh
Confidence 9999987766543
No 19
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.93 E-value=8.9e-24 Score=234.93 Aligned_cols=269 Identities=18% Similarity=0.260 Sum_probs=201.4
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|+.. .+...++++.+++++.+.+|..|. .+. + -.++.|.+.+.... .++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~----------~---~~~~~ii~~S~~~~-~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PEL----------L---DKNAKIIVPSQFLK-KFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhH----------h---ccCCEEEEcCHHHH-HHHHh---hC-
Confidence 5999999843 344567888899999999998763 111 1 13577777665433 33321 00
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCChHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLA 347 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A 347 (755)
...++.++|+|||.+.|.+.. ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 012467899999998886421 12234444 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEE
Q 004411 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427 (755)
Q Consensus 348 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 427 (755)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .|+++ +.++.+++.++|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~~~-G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCIML-GGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEEEe-CCCCHHHHHHHHHhCCEEE
Confidence 999999999876 8888865432222334566777777766532 36654 6789999999999999999
Q ss_pred EcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcE-EeCCCCHHHHHHHHHH
Q 004411 428 VNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI-RVNPWNVDAVADAMDS 502 (755)
Q Consensus 428 vtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~VnP~d~~~~A~ai~~ 502 (755)
+||. .||||++++||||||. |+|+|..+|+.+.+. +|+ +++|.|++++|++|.+
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~---------------------PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ 340 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGK---------------------PVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR 340 (380)
T ss_pred eCCCCccccccHHHHHHHcCC---------------------CEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH
Confidence 9997 5999999999999975 899999999888773 366 6789999999999999
Q ss_pred HhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHH
Q 004411 503 ALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 503 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (755)
++++++ +..+.++.++++ .++++..-++++++.++.
T Consensus 341 ll~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 341 TLADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHcCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999764 345667777775 568999999999888765
No 20
>PRK14098 glycogen synthase; Provisional
Probab=99.93 E-value=5.5e-24 Score=243.30 Aligned_cols=319 Identities=14% Similarity=0.157 Sum_probs=214.9
Q ss_pred hhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhhc------CCCeEEEEEecCC-----CchhhhhcC
Q 004411 167 GEWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIYRTL 234 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~r~l 234 (755)
+....|.-.++..++.+... ++| |+||+||||..++|.+++++. .++|++++.|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34556666666666655432 244 999999999999999998753 4789999999752 211111113
Q ss_pred CCh------------HHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCccc
Q 004411 235 PVR------------DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302 (755)
Q Consensus 235 p~~------------~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~ 302 (755)
|.. .-+-.++..||.|.--++.|++...+....-.|++. .+..+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 311 112235677888888888777664320000011110 01113457889999999999
Q ss_pred ccccccCc-----------hhHHHHHHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 303 FESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 303 f~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
|.+..... ........+++++ +++++|++|||+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 97642110 0011223455555 2568999999999999999999999998752 3 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|. |+. .+++++++++.+. +. .|.+. +.++.+++..+|+.||+||+||..||||++.+|||+||
T Consensus 342 vG~-----G~~--~~~~~l~~l~~~~----~~----~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGS-----GDK--EYEKRFQDFAEEH----PE----QVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeC-----CCH--HHHHHHHHHHHHC----CC----CEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 883 221 2455677776653 21 26655 46888999999999999999999999999999999996
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-------CcEEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHH
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHEK 517 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~ai~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~ 517 (755)
. |+|++..+|+.+.+. +|++++|.|++++|++|.+++.+ .++.++...++
T Consensus 406 ~---------------------ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~ 464 (489)
T PRK14098 406 T---------------------IPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLE 464 (489)
T ss_pred C---------------------CeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 4 788999999987762 58999999999999999998743 22222222221
Q ss_pred HhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 518 HYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 518 ~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
. ..+.++|..-++++++-.+++
T Consensus 465 ~--~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 465 A--MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred H--hcCCCChHHHHHHHHHHHHHH
Confidence 1 235688888888887766554
No 21
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.92 E-value=9e-24 Score=239.35 Aligned_cols=297 Identities=15% Similarity=0.123 Sum_probs=192.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch-h-hhh------------cCCChHH-HHHHhhhCCEEEEeCH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS-E-IYR------------TLPVRDE-ILKSLLNSDLIGFHTF 255 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~-e-~~r------------~lp~~~~-il~~ll~~Dligf~t~ 255 (755)
.|+|++|+++..++..++++.. ++|++++.|...... . +.. .+..+-. ....+..+|.|...+.
T Consensus 115 ~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 193 (439)
T TIGR02472 115 PDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTH 193 (439)
T ss_pred CCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCH
Confidence 3999999988777777776654 679999999753211 0 000 0000000 0112345666655554
Q ss_pred HHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEec
Q 004411 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVD 333 (755)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vd 333 (755)
..++.-+. ... .-...++.++|+|||++.|.+.....+.......+++.. +++++|++||
T Consensus 194 ~~~~~~~~---~~~---------------~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG 255 (439)
T TIGR02472 194 QEIEEQYA---LYD---------------SYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAIS 255 (439)
T ss_pred HHHHHHHH---hcc---------------CCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEc
Confidence 32221110 000 112347889999999999976432211111112222221 4678999999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec-CCCCCch-hHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC
Q 004411 334 DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN-PARSSGK-DVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (755)
Q Consensus 334 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~-p~r~~~~-~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v 411 (755)
|+++.||+..+|+||.++.+..+.. ++++ ++|. +.+.... ...++.+++.+++++++-. + .|. +.+.+
T Consensus 256 rl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~----~--~V~-f~g~~ 325 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRYDLY----G--KVA-YPKHH 325 (439)
T ss_pred CCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHcCCC----c--eEE-ecCCC
Confidence 9999999999999998642211111 2322 3342 1111111 1112333455555554321 1 255 45688
Q ss_pred ChhhHHHHHHhC----cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---C
Q 004411 412 STQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---G 484 (755)
Q Consensus 412 ~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 484 (755)
+.+++.++|+.| |+||+||.+||||++++||||||. |+|+|..+|+.+.+. +
T Consensus 326 ~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~---------------------PvV~s~~gg~~eiv~~~~~ 384 (439)
T TIGR02472 326 RPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL---------------------PIVATDDGGPRDIIANCRN 384 (439)
T ss_pred CHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC---------------------CEEEeCCCCcHHHhcCCCc
Confidence 999999999988 999999999999999999999975 899999999998884 4
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHH
Q 004411 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDL 538 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 538 (755)
|++|+|.|++++|++|.++++++ ++++.+.++.++++. .++|..-+++|++-|
T Consensus 385 G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 385 GLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999865 467777788888875 578888888777644
No 22
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.92 E-value=2.3e-23 Score=238.23 Aligned_cols=292 Identities=18% Similarity=0.210 Sum_probs=201.2
Q ss_pred CCEEEEeCCccchHHHHHHhhcC--CCeEEEEEecCCCc----hhhhhcCCChH--------------H-HHHHhhhCCE
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFH--RVKVGFFLHSPFPS----SEIYRTLPVRD--------------E-ILKSLLNSDL 249 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP~----~e~~r~lp~~~--------------~-il~~ll~~Dl 249 (755)
-|+||.||+|..++|.++++... ++|++++.|...+. .+.+..+.... . +-.++..||.
T Consensus 129 ~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 129 PDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADR 208 (473)
T ss_pred CCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCc
Confidence 49999999999999999988765 38999999986421 22222111110 1 1224566677
Q ss_pred EEEeCHHHHHHHHHHHhhHhCccccccCceeEEE--EcCeEEEEEEEeccCCcccccccccCc-----------hhHHHH
Q 004411 250 IGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQFESIMSLD-----------VTGQKV 316 (755)
Q Consensus 250 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~~f~~~~~~~-----------~~~~~~ 316 (755)
|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... ......
T Consensus 209 v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 276 (473)
T TIGR02095 209 VTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK 276 (473)
T ss_pred CeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence 776666665554321 0000 000 111345788999999999987632100 011223
Q ss_pred HHHHHHcC-----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004411 317 KELKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (755)
Q Consensus 317 ~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~ 391 (755)
..++++++ ++++|++|||+.+.||+..+++|++++.++. +.|+++|. ++ +++++++++++.+
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~-----g~--~~~~~~l~~~~~~ 343 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGT-----GD--PELEEALRELAER 343 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECC-----CC--HHHHHHHHHHHHH
Confidence 45677762 6789999999999999999999999987542 44887774 22 2345667777654
Q ss_pred HhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEE
Q 004411 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (755)
Q Consensus 392 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (755)
. +. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+||. |+|
T Consensus 344 ~----~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~---------------------pvI 393 (473)
T TIGR02095 344 Y----PG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGT---------------------VPI 393 (473)
T ss_pred C----CC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCC---------------------CeE
Confidence 3 21 255553 46788889999999999999999999999999999974 899
Q ss_pred EeCCCCcccccC---------CcEEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 472 VSEFIGCSPSLS---------GAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 472 ~Se~~G~~~~l~---------~ai~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
+|..+|..+.+. +|++++|.|++++|++|.+++.+ .++.++.+.++.. .+.++|..-++++++-.+
T Consensus 394 ~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 394 VRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred EccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 999999999882 38999999999999999999873 2333333333332 246888888888876554
No 23
>PRK14099 glycogen synthase; Provisional
Probab=99.92 E-value=1.2e-23 Score=240.35 Aligned_cols=295 Identities=17% Similarity=0.158 Sum_probs=193.4
Q ss_pred CEEEEeCCccchHHHHHHhh-cCCCeEEEEEecC-----CCchhhhhc--CCCh-------------HHHHHHhhhCCEE
Q 004411 192 DYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSP-----FPSSEIYRT--LPVR-------------DEILKSLLNSDLI 250 (755)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~r~--lp~~-------------~~il~~ll~~Dli 250 (755)
||||+||||..++|.+++.+ ..+++++++.|.. ||. ..+.. +|.. .-+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 99999999999999988753 2467899999974 221 11111 1110 0122335566666
Q ss_pred EEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCc-----------hhHHHHHHH
Q 004411 251 GFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLD-----------VTGQKVKEL 319 (755)
Q Consensus 251 gf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~-----------~~~~~~~~l 319 (755)
.--+..+++...+.- .-.|++. .+..+..++.++|+|||++.|.+..... ........+
T Consensus 214 itVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 214 TTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 666665554433200 0000000 0111345788999999999997642110 001112456
Q ss_pred HHHcC-----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc
Q 004411 320 KEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL 394 (755)
Q Consensus 320 r~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~ 394 (755)
+++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|. |+ .++++++++++.+.
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~-- 348 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAY-- 348 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHC--
Confidence 66662 356888899999999999999999998753 3 34887774 22 23455666666543
Q ss_pred ccCCCCCccEEEecCCCChhhHHHHH-HhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe
Q 004411 395 NFGKPGYEPIVIIKEPLSTQDKVPYY-AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (755)
Q Consensus 395 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (755)
+. .++++.+. .+++..+| +.||+||+||.+||||++.+|||+||. |+|+|
T Consensus 349 --~~----~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~---------------------ppVvs 399 (485)
T PRK14099 349 --PG----QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGA---------------------VPVVA 399 (485)
T ss_pred --CC----CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCC---------------------CcEEe
Confidence 21 25434444 67888887 569999999999999999999999964 67779
Q ss_pred CCCCccccc-C-----------CcEEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 474 EFIGCSPSL-S-----------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 474 e~~G~~~~l-~-----------~ai~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
..+|..+.+ . +|++|+|.|++++|++|.+++. ..++.++...++.+ .+.++|..-++++++-.+
T Consensus 400 ~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~ 477 (485)
T PRK14099 400 RVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYR 477 (485)
T ss_pred CCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHH
Confidence 999988876 2 4899999999999999998532 22334443333333 367888888888887766
Q ss_pred HHHH
Q 004411 540 RACR 543 (755)
Q Consensus 540 ~~~~ 543 (755)
++..
T Consensus 478 ~l~~ 481 (485)
T PRK14099 478 SLVA 481 (485)
T ss_pred HHHh
Confidence 6543
No 24
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.92 E-value=3.9e-24 Score=223.26 Aligned_cols=166 Identities=30% Similarity=0.454 Sum_probs=139.3
Q ss_pred cCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecC
Q 004411 583 TNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~ 660 (755)
|++++|+|||||||++.. |....+++++.++|++|++++++.|+|+|||+...+...+. +++++++|+||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~-~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVK-LPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCC-CCceeEEeecCEEEecCC
Confidence 578999999999999864 45678899999999999999999999999999999887764 578999999999998643
Q ss_pred CC-ceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccC-CCCcchhhHHHHHHHHHHHhcCCCeEEEe
Q 004411 661 NS-AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHA-DPHFGSCQAKELLDHLENVLANEPVVVKR 738 (755)
Q Consensus 661 ~~-~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~a-d~~~~~~qa~el~~~L~~~l~~~~~~V~s 738 (755)
.. .|.... .....|++.+.++++.+.++ ||+++|+|+.+++||||.+ +++++..|+.++..++.+ ..++.|..
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~---~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNLT-EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILS---FTDLEVMD 154 (244)
T ss_pred Ccceeeech-hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhc---CCCEEEEE
Confidence 22 355421 22247899999999998887 9999999999999999999 788887788777776643 34789999
Q ss_pred cCeEEEEEeCCCCCCC
Q 004411 739 GQHIVEVKPQVCQHQS 754 (755)
Q Consensus 739 G~~~VEV~p~gvnKG~ 754 (755)
|+.++|++|.++|||.
T Consensus 155 g~~~~e~~p~~~~Kg~ 170 (244)
T TIGR00685 155 GKAVVELKPRFVNKGE 170 (244)
T ss_pred CCeEEEEeeCCCCHHH
Confidence 9999999999999984
No 25
>PLN02151 trehalose-phosphatase
Probab=99.91 E-value=4.7e-24 Score=228.96 Aligned_cols=167 Identities=19% Similarity=0.351 Sum_probs=137.2
Q ss_pred hccCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEe
Q 004411 581 NKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRW 658 (755)
Q Consensus 581 ~~s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~ 658 (755)
..+++++||+||||||+|+. |....++++++++|++|++ +..|+|+|||+++.+.++++ +++++++|+||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 56678999999999999876 4567899999999999996 46899999999999999997 5679999999999987
Q ss_pred cC-CCceeE----cccCcCccHHHHHHHHHHHH---hcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhc
Q 004411 659 SK-NSAWEI----CSLTRDFDWKEIAEPVMKLY---TETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA 730 (755)
Q Consensus 659 ~~-~~~w~~----~~~~~~~~w~~~v~~i~~~y---~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~ 730 (755)
++ +..|+. .....+..|.+.+.++++.+ +.++||++||+|+++++||||+++++ ++.++..++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 335631 11123457888888777665 47899999999999999999999765 33566777877777
Q ss_pred CCC-eEEEecCeEEEEEeC-CCCCCC
Q 004411 731 NEP-VVVKRGQHIVEVKPQ-VCQHQS 754 (755)
Q Consensus 731 ~~~-~~V~sG~~~VEV~p~-gvnKG~ 754 (755)
+.+ +.+..|++++||+|. ++|||+
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~ 272 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGK 272 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHH
Confidence 766 799999999999995 999995
No 26
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.91 E-value=2e-22 Score=225.30 Aligned_cols=287 Identities=16% Similarity=0.186 Sum_probs=209.9
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhc---CCC--hHHHHH--HhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT---LPV--RDEILK--SLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~---lp~--~~~il~--~ll~~Dligf~t~~~~~~Fl~ 263 (755)
.|+|++|++....++.++++. .++|+++++|..++-...+.. .|. ...+++ .+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 499999987666666666554 468899999975421111110 111 112221 345789999999988777653
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (755)
. .+ ....++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||
T Consensus 181 ~----~~---------------~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YD---------------ADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cC---------------CChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 12 1234678899999998886421 12234444 36789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSG-KDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
+..+++|++++++++|+. ++.|+++|.+.. ++ +.. +++++++++.+.. ..|.+ .+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~~-~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVRF-LPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEEE-CCCCCHHHHHHH
Confidence 999999999999988873 466888886432 23 222 3455555554321 12554 568999999999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAV 496 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~ 496 (755)
|+.||+|++||..||||++++|||+||. |+|+|..+|..+.+. .|++++|.|++++
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~---------------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l 358 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGT---------------------PVVAARVGGLPVAVADGETGLLVDGHDPADW 358 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCC---------------------CEEEecCCCcHhhhccCCceEECCCCCHHHH
Confidence 9999999999999999999999999975 899999999888773 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 497 ADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
|++|.++++.+ +++..+.+..++++..+++...++.+++-+.+.
T Consensus 359 a~~i~~~l~~~-~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 359 ADALARLLDDP-RTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999864 455666667788888899999999888766653
No 27
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.91 E-value=2.2e-22 Score=235.61 Aligned_cols=339 Identities=12% Similarity=0.116 Sum_probs=213.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCC----chhh-hhcCC------
Q 004411 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP----SSEI-YRTLP------ 235 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~-~r~lp------ 235 (755)
+.|......+...++.+........|+|+.|.+.--+++..++++. +++..++.|..=. .+.. +..+.
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 3465555555555555554433224999999988888888888775 6888888885411 1110 00010
Q ss_pred Ch-HHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccc-cccCceeEEEE--cCeEEEEEEEeccCCcccccccccCch
Q 004411 236 VR-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNY-ESKRGYIGLDY--FGRTVSIKILPVGIHMGQFESIMSLDV 311 (755)
Q Consensus 236 ~~-~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~-~~~~~~~~i~~--~gr~~~i~v~p~GId~~~f~~~~~~~~ 311 (755)
.+ ..-+..|-.||.|.-.|+.....-...+.. .+.-. -+..+...+.. .....++.++|+|+|++.|.+......
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~ 519 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEK 519 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhh
Confidence 01 001245667999988886432211111100 00000 00001111110 111247889999999999977432110
Q ss_pred hH-HHH----------HHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC--
Q 004411 312 TG-QKV----------KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS-- 373 (755)
Q Consensus 312 ~~-~~~----------~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~-- 373 (755)
.. ... ...++.+ +++++|++|||+++.||+..+++||.++.+..+ .+.||+||++...
T Consensus 520 r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~~ 595 (784)
T TIGR02470 520 RLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAKE 595 (784)
T ss_pred hhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccccc
Confidence 00 000 0112333 378999999999999999999999987643333 3558888864321
Q ss_pred -CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH-h---CcEEEEcCCCcCCCccceeeeecccC
Q 004411 374 -SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA-I---AECCVVNCVRDGMNLVPYKYTVSRQG 448 (755)
Q Consensus 374 -~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~-~---ADv~vvtS~~EG~nLv~~Ea~a~~~~ 448 (755)
...+..+..+++.+++++.+.. + .|.|++...+..++..+|+ + +||||+||.+||||||++||||||.
T Consensus 596 s~d~ee~~~i~~L~~la~~~gL~-g-----~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGl- 668 (784)
T TIGR02470 596 SKDREEQAEIEKMHNLIDQYQLH-G-----QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGL- 668 (784)
T ss_pred ccchhHHHHHHHHHHHHHHhCCC-C-----eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCC-
Confidence 1112223345666777665322 2 3776653346667777776 2 4699999999999999999999975
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhHh
Q 004411 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILRHEKHYKYI 522 (755)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v 522 (755)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++ ..++.++...++++++|
T Consensus 669 --------------------PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV 728 (784)
T TIGR02470 669 --------------------PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRI 728 (784)
T ss_pred --------------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 899999999999883 5999999999999999999874 24455666667778887
Q ss_pred -hhcCHHHHHHHHHHHH
Q 004411 523 -SSHDVAYWAKSIDQDL 538 (755)
Q Consensus 523 -~~~~~~~W~~~~l~~l 538 (755)
+.++|...++++++-.
T Consensus 729 ~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 729 YEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 5689999888887554
No 28
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.91 E-value=8e-23 Score=228.35 Aligned_cols=289 Identities=14% Similarity=0.132 Sum_probs=196.8
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCc--hhh-hh-cCCCh--------HH---HHHHhhhCCE
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPS--SEI-YR-TLPVR--------DE---ILKSLLNSDL 249 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~r-~lp~~--------~~---il~~ll~~Dl 249 (755)
+.++| |+|+.| +.+....++++.+|+++++.+.|..+-. .+. |. ..+.+ .. ....+-.+|.
T Consensus 84 ~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 159 (396)
T cd03818 84 KGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADA 159 (396)
T ss_pred cCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCE
Confidence 33445 899999 4555666799999999988777643311 110 10 11111 11 2234566777
Q ss_pred EEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCc
Q 004411 250 IGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGK 326 (755)
Q Consensus 250 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 326 (755)
+...+....+.|.. .. ..++.++|+|||.+.|.+... . ...++... .++
T Consensus 160 vi~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~~---~---~~~~~~~~~~~~~~ 211 (396)
T cd03818 160 GVSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDPQ---A---RLRLPNGRVLTPGD 211 (396)
T ss_pred EECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCch---h---hhcccccccCCCCC
Confidence 77666543333221 01 136888999999999876321 1 11122111 467
Q ss_pred eEEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004411 327 IVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (755)
Q Consensus 327 ~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~ 405 (755)
++|+++|| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.++++.+.+. ..|+
T Consensus 212 ~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~V~ 284 (396)
T cd03818 212 EVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL---SRVH 284 (396)
T ss_pred eEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc---ceEE
Confidence 89999998 9999999999999999998899877 88888532111100000000111223333322221 2466
Q ss_pred EecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--
Q 004411 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-- 483 (755)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 483 (755)
|+ |.++.+++.++|+.|||+++||..||+|++++||||||. |+|+|..+|..+.+.
T Consensus 285 f~-G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~---------------------PVIas~~~g~~e~i~~~ 342 (396)
T cd03818 285 FL-GRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC---------------------LVVGSDTAPVREVITDG 342 (396)
T ss_pred Ee-CCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC---------------------CEEEcCCCCchhhcccC
Confidence 54 689999999999999999999999999999999999975 899999999888884
Q ss_pred -CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHH
Q 004411 484 -GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSID 535 (755)
Q Consensus 484 -~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 535 (755)
+|++|+|.|++++|++|.++++++ +++..+.++.++++.+ +++..-+++++
T Consensus 343 ~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 343 ENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 489999999999999999999875 4667777788998877 77776666654
No 29
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.91 E-value=2e-22 Score=225.96 Aligned_cols=275 Identities=16% Similarity=0.133 Sum_probs=200.2
Q ss_pred CCEEEEeCCccchHHHHHHhh-cCCCeEEEEEecCCCc-hhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPS-SEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRM 268 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~ 268 (755)
.|+|+.|..+.-.+..++++. ..+.++.+++|.+-.. ..+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 499999988776667777663 2244667788965221 11110 11112223345788888777654444331
Q ss_pred hCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHH
Q 004411 269 LGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAM 348 (755)
Q Consensus 269 lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~ 348 (755)
.|. ...+|.++|+|||++.|.+... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1236778999999998864211 0123456799999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEE
Q 004411 349 GQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVV 428 (755)
Q Consensus 349 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 428 (755)
+.+.+++|+++ |+++| +|+.. +++++++++.+.. ..+.+.|.++.+|+.++|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG-----~G~~~----~~l~~~~~~~~l~-------~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILG-----IGPWE----RRLRTLIEQYQLE-------DVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEE-----CchhH----HHHHHHHHHcCCC-------CeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 88887 34433 4455555554321 23445679999999999999999999
Q ss_pred cCCC------cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHH
Q 004411 429 NCVR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADA 499 (755)
Q Consensus 429 tS~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~a 499 (755)
||.. |||+++.+||||||. |+|+|..+|+.+.+. +|++|+|.|++++|++
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G~---------------------PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~a 363 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVGI---------------------PVVSTLHSGIPELVEADKSGWLVPENDAQALAQR 363 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCCC---------------------CEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHH
Confidence 9984 999999999999975 899999999998883 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
|.+++++++++++.+.++.++++. ++++...++++.+-+++
T Consensus 364 i~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 364 LAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999667778888888998885 58998888888766543
No 30
>PLN02580 trehalose-phosphatase
Probab=99.91 E-value=1.3e-23 Score=228.23 Aligned_cols=170 Identities=19% Similarity=0.286 Sum_probs=135.2
Q ss_pred HHhhccCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceE
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~ 655 (755)
.+|.++++++|||||||||+|+. |....+++++.++|++|+++ ..|+|+|||+++.|+++++. ++++++|+||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 47889999999999999999976 46789999999999999985 47999999999999999975 569999999999
Q ss_pred EEecCC----CceeEccc------------CcCccHHHHHHHHHHH---HhcCCCCcEEeecceEEEEEeccCCCCcchh
Q 004411 656 TRWSKN----SAWEICSL------------TRDFDWKEIAEPVMKL---YTETTDGSFIEDKETAIVWHHQHADPHFGSC 716 (755)
Q Consensus 656 i~~~~~----~~w~~~~~------------~~~~~w~~~v~~i~~~---y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~ 716 (755)
++.+.+ ..|..+.. .....|.+.+.++++. ++.+++|++||+|+++++||||+++++++..
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986421 12221100 1235677666666655 5677899999999999999999998877655
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEecCeEEEEEe-CCCCCCC
Q 004411 717 QAKELLDHLENVLANEP-VVVKRGQHIVEVKP-QVCQHQS 754 (755)
Q Consensus 717 qa~el~~~L~~~l~~~~-~~V~sG~~~VEV~p-~gvnKG~ 754 (755)
++.++...+. +.+ +.+..|++++||+| .++|||.
T Consensus 269 ~~~~l~~~l~----~~~~l~v~~Gk~vlEVrP~~g~~KG~ 304 (384)
T PLN02580 269 VAQCVHDVLK----KYPRLRLTHGRKVLEVRPVIDWNKGK 304 (384)
T ss_pred HHHHHHHHHH----hCCceEEEeCCeEEEEecCCCCCHHH
Confidence 5555554443 444 88999999999999 5999984
No 31
>PLN00142 sucrose synthase
Probab=99.90 E-value=5e-22 Score=232.59 Aligned_cols=332 Identities=15% Similarity=0.164 Sum_probs=208.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCC----Cchh--------hhhcC
Q 004411 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSE--------IYRTL 234 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e--------~~r~l 234 (755)
+.|..-.+.+...++.+.......-|+|+-|++.-.+++..|+++. ++|.+++.|+-= +.++ -|+..
T Consensus 385 ~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~ 463 (815)
T PLN00142 385 DVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFS 463 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhh
Confidence 4566666666666666544333123999999888878888888876 799999999431 1111 11100
Q ss_pred -CChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccC-----c----eeEEEEcCeEEEEEEEeccCCccccc
Q 004411 235 -PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKR-----G----YIGLDYFGRTVSIKILPVGIHMGQFE 304 (755)
Q Consensus 235 -p~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~-----~----~~~i~~~gr~~~i~v~p~GId~~~f~ 304 (755)
....|. ..|-.||.|.-.|+.-....-. ++ + .|++-. + .-++++.. -++.++|+|+|++.|.
T Consensus 464 ~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F~ 535 (815)
T PLN00142 464 CQFTADL-IAMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIYF 535 (815)
T ss_pred hchHHHH-HHHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhcC
Confidence 011111 1455666665555432211100 00 0 010100 0 00111112 2788899999999987
Q ss_pred ccccCch--------hHHHH---HHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 004411 305 SIMSLDV--------TGQKV---KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (755)
Q Consensus 305 ~~~~~~~--------~~~~~---~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 368 (755)
+...... ..+.. ...++.+ +++++|++|||+++.||+..+++||.++.+..+++ .|++||
T Consensus 536 P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~LVIVG 611 (815)
T PLN00142 536 PYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NLVVVG 611 (815)
T ss_pred CCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EEEEEE
Confidence 5421100 00000 0011112 35779999999999999999999999886665554 488888
Q ss_pred cCC-CCCchhH--HHHHHHHHHHHHHHhcccCCCCCccEEEecC---CCChhhHHHHHH-hCcEEEEcCCCcCCCcccee
Q 004411 369 NPA-RSSGKDV--QDLLSDTNRIAEEINLNFGKPGYEPIVIIKE---PLSTQDKVPYYA-IAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 369 ~p~-r~~~~~~--~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~---~v~~~el~aly~-~ADv~vvtS~~EG~nLv~~E 441 (755)
++. .....+. .+..+++.+++++.+.. + .|.|++. ..+.++++.+|+ ++||||+||.+||||++++|
T Consensus 612 gg~d~~~s~d~ee~~el~~L~~La~~lgL~-~-----~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLE 685 (815)
T PLN00142 612 GFIDPSKSKDREEIAEIKKMHSLIEKYNLK-G-----QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVE 685 (815)
T ss_pred CCccccccccHHHHHHHHHHHHHHHHcCCC-C-----cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHH
Confidence 641 1111111 12224566666664322 2 3666542 345577888777 57999999999999999999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhc---CCHHHHHHHH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILRH 515 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~---m~~~er~~r~ 515 (755)
|||||. |+|+|..+|+.+.+. +|++|+|.|++++|++|.+++. ..++.++...
T Consensus 686 AMA~Gl---------------------PVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg 744 (815)
T PLN00142 686 AMTCGL---------------------PTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKIS 744 (815)
T ss_pred HHHcCC---------------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 999975 899999999999883 4999999999999999987653 3455666667
Q ss_pred HHHhhHh-hhcCHHHHHHHHHHHH
Q 004411 516 EKHYKYI-SSHDVAYWAKSIDQDL 538 (755)
Q Consensus 516 ~~~~~~v-~~~~~~~W~~~~l~~l 538 (755)
+++++++ +.++|...++++++-.
T Consensus 745 ~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 745 DAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7788888 5689999888887643
No 32
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.90 E-value=5.6e-22 Score=226.36 Aligned_cols=282 Identities=15% Similarity=0.193 Sum_probs=199.3
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCCh-H---HHHHHh-hhCCEEEEeCHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-D---EILKSL-LNSDLIGFHTFDYAR 259 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~-~---~il~~l-l~~Dligf~t~~~~~ 259 (755)
+..+| |+|++|+...+..+.++-.+..++|++++.|.-+|..--....++. + .+.+.+ ..+|.|...+....+
T Consensus 141 ~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~ 218 (465)
T PLN02871 141 ARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGK 218 (465)
T ss_pred HhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 33455 9999998766655554433344788988898755432110011110 0 111222 357888887776665
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc----CCceEEEEeccc
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF----DGKIVILGVDDM 335 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VdRl 335 (755)
.+.. .+. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||+
T Consensus 219 ~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl 272 (465)
T PLN02871 219 ELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRL 272 (465)
T ss_pred HHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCC
Confidence 5542 110 012367889999999998754221 1233333 367899999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhh
Q 004411 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (755)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 415 (755)
.+.||+..+++|++++ |+++ |+++| +|+.. +++++++... +|+|+ |.++.+|
T Consensus 273 ~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~~----------~V~f~-G~v~~~e 324 (465)
T PLN02871 273 GAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAGT----------PTVFT-GMLQGDE 324 (465)
T ss_pred chhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhccC----------CeEEe-ccCCHHH
Confidence 9999999999988653 6554 88887 34433 3444444321 36654 6899999
Q ss_pred HHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC------CcEEeC
Q 004411 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------GAIRVN 489 (755)
Q Consensus 416 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~ai~Vn 489 (755)
+..+|+.||+||+||..||||++++||||||. |+|+|..+|+.+.+. +|++++
T Consensus 325 v~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~---------------------PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 325 LSQAYASGDVFVMPSESETLGFVVLEAMASGV---------------------PVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred HHHHHHHCCEEEECCcccccCcHHHHHHHcCC---------------------CEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 99999999999999999999999999999975 899999999888773 389999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHH-HHHHHHh
Q 004411 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD-LERACRD 544 (755)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~ 544 (755)
|.|++++|++|.++++.+ +.++.+.++.++++.+++|...++++++. ..++...
T Consensus 384 ~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 384 PGDVDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999854 56667777888899999999999999874 4444443
No 33
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.90 E-value=5.9e-22 Score=226.69 Aligned_cols=310 Identities=17% Similarity=0.191 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhc-----CCCeEEEEEecCCCch----hhhhcC--CC---
Q 004411 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF-----HRVKVGFFLHSPFPSS----EIYRTL--PV--- 236 (755)
Q Consensus 171 ~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~r~l--p~--- 236 (755)
.|.-.++...+.+... ...-|+|++||+|..++|.++++.. .++|++|+.|.+.+.. ..+..+ ++
T Consensus 111 ~~~~f~~~~~~~l~~~-~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 111 RFALFSRAALELLRRL-GWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHhc-CCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 3443444444443332 1224999999999999999998874 5789999999874321 111111 11
Q ss_pred ----------h-HHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEE--EcCeEEEEEEEeccCCcccc
Q 004411 237 ----------R-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQF 303 (755)
Q Consensus 237 ----------~-~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~~f 303 (755)
. .-+..++..||.|...+..+++..++.- .| . +++ ...+..++.++|+|||.+.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~---~~------~---gl~~~~~~~~~ki~~I~NGid~~~~ 257 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE---FG------E---GLDGLLRARAGKLSGILNGIDYDVW 257 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC---CC------c---chHHHHHhccCCeEEEeCCCcCccc
Confidence 0 1222345667777776766665543210 00 0 000 11223578899999999998
Q ss_pred cccccCc-----------hhHHHHHHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 004411 304 ESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (755)
Q Consensus 304 ~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 367 (755)
.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.++. +.|+++
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~ 331 (476)
T cd03791 258 NPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVIL 331 (476)
T ss_pred CccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEE
Confidence 7643210 0112234466666 36789999999999999999999999987643 447777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 368 ~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
|.. + .++.+++.+++.+.. ..|+++.+ .+.+++..+|+.||++++||..||||++.+|||+||.
T Consensus 332 G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~ 395 (476)
T cd03791 332 GSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGT 395 (476)
T ss_pred ecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCC
Confidence 742 1 134455666655431 13666654 4577788999999999999999999999999999975
Q ss_pred CCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--------CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHH
Q 004411 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILRHE 516 (755)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~ 516 (755)
|+|+|..+|..+.+ + +|++++|.|+++++++|.+++.+. ++++..+.+
T Consensus 396 ---------------------pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 396 ---------------------VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred ---------------------CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 88999999999988 3 599999999999999999998643 233333333
Q ss_pred HHhhHhhhcCHHHHHHHHHHHH
Q 004411 517 KHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~l 538 (755)
+..+ ..+++..-++++++-.
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHhc--cCCChHHHHHHHHHHH
Confidence 3222 3467777777776543
No 34
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=6.2e-22 Score=221.38 Aligned_cols=276 Identities=13% Similarity=0.170 Sum_probs=196.0
Q ss_pred CEEEEeCCccchH-HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHH-hhhCCEEEEeCHHHHHHHHHHHhhHh
Q 004411 192 DYVWIHDYHLMVL-PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARHFLSSCSRML 269 (755)
Q Consensus 192 DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~-ll~~Dligf~t~~~~~~Fl~~~~r~l 269 (755)
|+|++|+++.... ...+-.+..++|++++.|..|+..+... .....+.+. +-.+|.+.+.+....+.+... .
T Consensus 90 DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----~ 163 (398)
T cd03796 90 TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR----A 163 (398)
T ss_pred CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH----h
Confidence 9999999875533 2333333446899999998765322211 011222222 346788888887665554321 0
Q ss_pred CccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHH
Q 004411 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349 (755)
Q Consensus 270 g~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 349 (755)
+ ....++.++|+|+|++.|.+... . ..+++++|+++||+.+.||+..+++|+.
T Consensus 164 ~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~~li~a~~ 216 (398)
T cd03796 164 S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGIDLLVGIIP 216 (398)
T ss_pred C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHHHHHHHHH
Confidence 1 11346788999999998865311 0 1256789999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEc
Q 004411 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (755)
Q Consensus 350 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 429 (755)
.+.+++|+++ |+++|. ++.. +++.+++++.+. .+ .|.++ |.++.+++.++|+.||++++|
T Consensus 217 ~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~l----~~--~v~~~-G~~~~~~~~~~l~~ad~~v~p 276 (398)
T cd03796 217 EICKKHPNVR----FIIGGD-----GPKR----ILLEEMREKYNL----QD--RVELL-GAVPHERVRDVLVQGHIFLNT 276 (398)
T ss_pred HHHhhCCCEE----EEEEeC-----CchH----HHHHHHHHHhCC----CC--eEEEe-CCCCHHHHHHHHHhCCEEEeC
Confidence 9988888766 887873 3333 334455544321 11 36655 689999999999999999999
Q ss_pred CCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C-cEEeCCCCHHHHHHHHHHHhcCC
Q 004411 430 CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G-AIRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 430 S~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-ai~VnP~d~~~~A~ai~~aL~m~ 507 (755)
|..||||++.+||||||. |+|+|..+|..+.+. + +++++| |.++++++|.+++.++
T Consensus 277 S~~E~~g~~~~EAma~G~---------------------PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 277 SLTEAFCIAIVEAASCGL---------------------LVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISIL 334 (398)
T ss_pred ChhhccCHHHHHHHHcCC---------------------CEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhCh
Confidence 999999999999999975 899999999988884 4 445555 9999999999999976
Q ss_pred HHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHHHHH
Q 004411 508 NQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACR 543 (755)
Q Consensus 508 ~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 543 (755)
.+. ....+..++++ ..+++..-++++++..+++..
T Consensus 335 ~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 335 RTG-KHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hhh-hhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 533 33445555655 458889889998888777543
No 35
>PLN03017 trehalose-phosphatase
Probab=99.90 E-value=5.8e-23 Score=221.15 Aligned_cols=169 Identities=21% Similarity=0.320 Sum_probs=135.1
Q ss_pred HHhhccCceEEEecCCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceE
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~ 655 (755)
.++.+.++.+||+||||||+|+.. ....+++++.++|++|++ +..|+|+|||++..+.++++ +.+++++|+||++
T Consensus 104 ~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~ 180 (366)
T PLN03017 104 MEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMD 180 (366)
T ss_pred HHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcE
Confidence 344566889999999999998764 344799999999999994 68899999999999999975 4679999999999
Q ss_pred EEecCCCceeEc-------ccCcCccHHHHHHHH---HHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHH
Q 004411 656 TRWSKNSAWEIC-------SLTRDFDWKEIAEPV---MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL 725 (755)
Q Consensus 656 i~~~~~~~w~~~-------~~~~~~~w~~~v~~i---~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L 725 (755)
++.+++ .|... .......|++.+.++ ++.++++++|++||+|+++++||||+++++ .+.++..++
T Consensus 181 i~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~ 255 (366)
T PLN03017 181 IKGPAK-GFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQV 255 (366)
T ss_pred EecCCC-cceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHH
Confidence 987643 33210 011234577777766 556778999999999999999999999764 345777778
Q ss_pred HHHhcCCC-eEEEecCeEEEEEeC-CCCCCC
Q 004411 726 ENVLANEP-VVVKRGQHIVEVKPQ-VCQHQS 754 (755)
Q Consensus 726 ~~~l~~~~-~~V~sG~~~VEV~p~-gvnKG~ 754 (755)
.+.+.+.+ +.+..|++++||+|. ++|||.
T Consensus 256 ~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~ 286 (366)
T PLN03017 256 RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGK 286 (366)
T ss_pred HHHHHhCCCcEEeCCCeEEEecCCCCCCHHH
Confidence 77777766 889999999999995 999995
No 36
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.90 E-value=2.1e-21 Score=215.32 Aligned_cols=284 Identities=14% Similarity=0.113 Sum_probs=203.9
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh-----cCCChHHH-HHHhhhCCEEEEeCHHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----TLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----~lp~~~~i-l~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
.|+|++|++...+.+.+++ +..+.|+++++|..+|...... .......+ ...+..+|.|...+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 5999999988776655554 3457889999998765321100 00011111 123456788888877666655431
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCh
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 341 (755)
- -+. ...++.++|+|+|++.|.+.. ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 011 134678899999998886421 12334444 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+++|++++. ++.+ |+++|.. ++..++.+++++++..++...+ .|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNRT-----GIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhccccC-----ceEEecCCCCHHHHHHHHH
Confidence 99999999873 3433 6666532 2223445566666655543221 3788888999999999999
Q ss_pred hCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH-----
Q 004411 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV----- 493 (755)
Q Consensus 422 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~----- 493 (755)
.|||+|+||..||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|.
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~---------------------PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~ 338 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGT---------------------PVVASATGGIPEVVVDGETGFLVPPDNSDADGF 338 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCC---------------------CEEEeCCCCHHHHhhCCCceEEcCCCCCcccch
Confidence 99999999999999999999999975 899999999888873 4899999999
Q ss_pred -HHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHH
Q 004411 494 -DAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 494 -~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (755)
++++++|.++++. ++++..+.++.++++ .++++..+++++++.+++
T Consensus 339 ~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 339 QAELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999986 446666667777776 468999999998877664
No 37
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.89 E-value=4.5e-21 Score=212.54 Aligned_cols=285 Identities=18% Similarity=0.158 Sum_probs=202.8
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhc-----CCC-hHHH-HHHhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-----LPV-RDEI-LKSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~-----lp~-~~~i-l~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
.|+|++|++....++..+.+. .++++.++.|........... .+. +..+ ...+..+|.|.+.+......+..
T Consensus 102 ~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 180 (398)
T cd03800 102 PDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYS 180 (398)
T ss_pred ccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHH
Confidence 399999998877776666554 478899999975432110000 000 1111 22345789999988876666543
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHH
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISL 343 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~ 343 (755)
. .+ ....++.++|+|+|.+.|.+.... ....+++. ...++.+|+++||+++.||+..
T Consensus 181 ~----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~ 237 (398)
T cd03800 181 L----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDT 237 (398)
T ss_pred H----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHH
Confidence 1 11 112347889999999888654221 11111111 1146789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhC
Q 004411 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (755)
Q Consensus 344 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 423 (755)
+++|+..+.+++|+++ |+++|....... .....+++.++++.+.. ..|. +.+.++.+++..+|+.|
T Consensus 238 ll~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~a 303 (398)
T cd03800 238 LIRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELARELGVI------DRVD-FPGRVSREDLPALYRAA 303 (398)
T ss_pred HHHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHHHHHhC
Confidence 9999999988877765 888885432221 22233455565554321 1355 45789999999999999
Q ss_pred cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHH
Q 004411 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAM 500 (755)
Q Consensus 424 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai 500 (755)
|++++||..||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|
T Consensus 304 di~l~ps~~e~~~~~l~Ea~a~G~---------------------Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i 362 (398)
T cd03800 304 DVFVNPALYEPFGLTALEAMACGL---------------------PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAAL 362 (398)
T ss_pred CEEEecccccccCcHHHHHHhcCC---------------------CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHH
Confidence 999999999999999999999975 899999999988883 48999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHH
Q 004411 501 DSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (755)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (755)
.++++++ ++++.+.++.++++ +.+++...+++++
T Consensus 363 ~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 363 RRLLTDP-ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999874 46666677788888 7789999888775
No 38
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.89 E-value=5.7e-21 Score=211.25 Aligned_cols=231 Identities=13% Similarity=0.118 Sum_probs=171.8
Q ss_pred hCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--
Q 004411 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (755)
Q Consensus 246 ~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 323 (755)
.+|.+...+....+.+... .+. ...++.++|+|||++.|.+.... . ....++.+
T Consensus 136 ~~~~~i~vs~~~~~~~~~~----~~~---------------~~~~~~vi~ngvd~~~~~~~~~~---~--~~~~~~~~~~ 191 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRGP----VKV---------------PPAKIHQIYNGVDTERFHPSRGD---R--SPILPPDFFA 191 (374)
T ss_pred cCCeEEEeCHHHHHHHHHh----cCC---------------ChhhEEEeccCccccccCCCccc---h--hhhhHhhcCC
Confidence 3677777777666555431 121 13467789999999988653211 1 11112222
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
.++.+|+++||+++.||+..+++|+..+++++|+...++.|+++|. |+.. +++++++.+.+. ..
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~ 255 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AH 255 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cc
Confidence 4678999999999999999999999999999987666678998883 3332 334445444322 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
.+++.+ +.+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+.
T Consensus 256 ~v~~~g--~~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~---------------------Pvv~s~~~g~~e~i~ 312 (374)
T TIGR03088 256 LVWLPG--ERDDVPALMQALDLFVLPSLAEGISNTILEAMASGL---------------------PVIATAVGGNPELVQ 312 (374)
T ss_pred eEEEcC--CcCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC---------------------CEEEcCCCCcHHHhc
Confidence 444555 367899999999999999999999999999999975 899999999998883
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHH
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (755)
.|++++|.|++++|++|.++++.+ +++..+.++.++++ ..+++..-++++.+-..+
T Consensus 313 ~~~~g~~~~~~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 313 HGVTGALVPPGDAVALARALQPYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 489999999999999999999854 45666677888887 578988888888766543
No 39
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.88 E-value=2.3e-21 Score=221.82 Aligned_cols=276 Identities=14% Similarity=0.125 Sum_probs=195.4
Q ss_pred CCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch---hhhhc---CCChHHH--------HH-HhhhCCEEEEe
Q 004411 189 PDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRT---LPVRDEI--------LK-SLLNSDLIGFH 253 (755)
Q Consensus 189 ~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~---lp~~~~i--------l~-~ll~~Dligf~ 253 (755)
++.|+||+|......++..+.++..+.|+.++.|--++.. ++... .+..+.+ .+ ....||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3569999998765545555444455789999999766531 22211 0000111 11 12345666554
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEec
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVD 333 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd 333 (755)
+....+... .++....++.++|+|||++.|.+.... ....++++|+++|
T Consensus 252 s~~~~~~~~--------------------~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~vG 300 (475)
T cd03813 252 YEGNRERQI--------------------EDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGLIG 300 (475)
T ss_pred CHHHHHHHH--------------------HcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEEEe
Confidence 443222111 111223467889999999988653210 1125678999999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCCh
Q 004411 334 DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLST 413 (755)
Q Consensus 334 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~ 413 (755)
|+.+.||+..+++|++.+.++.|+++ |+++|.. ++..++.+++++++++.+.. ..|.|++ .
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g-----~~~~~~~~e~~~li~~l~l~------~~V~f~G----~ 361 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPT-----DEDPEYAEECRELVESLGLE------DNVKFTG----F 361 (475)
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeE----EEEECCC-----CcChHHHHHHHHHHHHhCCC------CeEEEcC----C
Confidence 99999999999999999998888866 8877742 22234567788888776532 1366654 6
Q ss_pred hhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--------C
Q 004411 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------G 484 (755)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ 484 (755)
+++..+|+.||++|+||..|||+++++||||||. |+|+|+.+|+.+.+ . +
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~---------------------PVVatd~g~~~elv~~~~~~~~g~~ 420 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI---------------------PVVATDVGSCRELIEGADDEALGPA 420 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC---------------------CEEECCCCChHHHhcCCcccccCCc
Confidence 7899999999999999999999999999999975 89999999998887 3 4
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHH
Q 004411 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQ 536 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 536 (755)
|++++|.|++++|++|.++++.+ +.+....+..++++.+ +++...+++|.+
T Consensus 421 G~lv~~~d~~~la~ai~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 421 GEVVPPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred eEEECCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999999999999999864 4667777778888876 466777776654
No 40
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.88 E-value=1.3e-20 Score=205.47 Aligned_cols=280 Identities=18% Similarity=0.222 Sum_probs=198.7
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh-hhCCEEEEeCHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARH 260 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l-l~~Dligf~t~~~~~~ 260 (755)
++++..+| |+|++|.+|..++..+++...+..++..+.|...+..-+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34455566 899999999888888887776778888888864322111 11111111 1245555555555544
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 337 (755)
|+.. + .-...++.++|+|+|...|.+.. .....+++++ +++++++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 4431 0 01124678899999998875431 1123455555 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|+.++.+++|+++ |+++|. +++.+ ++.+.+.+.|.. ..|.+++ . .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~~~~~~~~~~~~------~~v~~~g-~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRA----TLERLIKALGLS------NRVKLLG-L--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHH----HHHHHHHhcCCC------CcEEEec-c--cccHH
Confidence 9999999999999998888766 887873 33333 334444443321 1366554 3 46899
Q ss_pred HHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHH
Q 004411 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAV 496 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~ 496 (755)
.+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +|+.++|.|++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~---------------------PvI~~~~~~~~e~i~~~g~~~~~~~~~~~ 316 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACEL---------------------PVVATDAGGVREVVGDSGLIVPISDPEAL 316 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcCC---------------------CEEEecCCChhhEecCCceEeCCCCHHHH
Confidence 999999999999999999999999999975 899999998888884 6899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHH
Q 004411 497 ADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (755)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 538 (755)
|++|.+++++++..+..+.+. ++++ +.+++..+++.+.+-+
T Consensus 317 ~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 317 ANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 999999998777666665555 5544 6789999999887654
No 41
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.87 E-value=1.7e-20 Score=206.01 Aligned_cols=274 Identities=16% Similarity=0.158 Sum_probs=193.5
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCC----chhhhhcCCChHHHHHH-hhhCCEEEEeCHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP----SSEIYRTLPVRDEILKS-LLNSDLIGFHTFDY 257 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~~r~lp~~~~il~~-ll~~Dligf~t~~~ 257 (755)
+++..+| |+|++|+.+..+....+.++ .++|+.+.+|.... .............+.+. +..+|.|.+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4455566 89999977654443334333 46888888884321 11111000011122222 34679888888765
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccc
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 337 (755)
.+.+... |. ...++.++|+|+|.+.|.+... -.++++++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeecc
Confidence 5555431 21 1236778999999988764210 134568999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|+..+.+++|+++ |+++|. ++.. ++++.++++.+.. + .|. +.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~~~~----~--~v~-~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARALGLG----G--RVT-FLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHcCCC----C--eEE-ECCCCCHHHHH
Confidence 9999999999999988888765 888873 3322 3455555543211 1 255 45689999999
Q ss_pred HHHHhCcEEEEcCC------CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEe
Q 004411 418 PYYAIAECCVVNCV------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRV 488 (755)
Q Consensus 418 aly~~ADv~vvtS~------~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~V 488 (755)
.+|+.||++++||. .|||+++++|||+||. |+|+|+.+|..+.+. +|+++
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~---------------------PvI~s~~~~~~e~i~~~~~g~~~ 318 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV---------------------PVVATRHGGIPEAVEDGETGLLV 318 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC---------------------CEEEeCCCCchhheecCCeeEEE
Confidence 99999999999997 5999999999999975 899999999988773 58999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHH
Q 004411 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (755)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 535 (755)
+|.|+++++++|.++++.+ +.+.....+.++++. .+++..+++.+.
T Consensus 319 ~~~d~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 319 PEGDVAALAAALGRLLADP-DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999999999999864 456666677888874 689888888765
No 42
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.87 E-value=3.4e-20 Score=202.24 Aligned_cols=268 Identities=16% Similarity=0.233 Sum_probs=193.7
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
+..++ |+|++|..+...+..++.+. .++|+.+.+|-.++....+ .. .+..+|.+.+.+....+.+.
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~------~~---~~~~~~~vi~~s~~~~~~~~-- 140 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFRY------NA---IMARGDRVIAVSNFIADHIR-- 140 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHHH------HH---HHHhcCEEEEeCHHHHHHHH--
Confidence 33455 89999987766555554443 4789999999776533211 12 24468888887765554443
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCh
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 341 (755)
...+. ...++.++|+|||...|.+..... .....+++++ .++++++++||+...||+
T Consensus 141 --~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 141 --ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred --HhcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 11221 124678899999999886542211 1122245555 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+++|+..+.+++|+++ |+++|... ..+.+.+++.+.+.+.+.. ..|.+++ . .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHHH
Confidence 999999999988766655 88888432 2223444555555443221 1366654 4 779999999
Q ss_pred hCcEEEEcC-CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004411 422 IAECCVVNC-VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (755)
Q Consensus 422 ~ADv~vvtS-~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (755)
.||++++|| ..||||++.+||||||. |+|+|..+|..+.+. +|++++|.|+++++
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~ 321 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGR---------------------PVIASDHGGARETVRPGETGLLVPPGDAEALA 321 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCC---------------------CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHH
Confidence 999999999 78999999999999975 899999988888773 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 498 DAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
++|..++..+++++....++.++++.++
T Consensus 322 ~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 322 QALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 9999888888888888888889888764
No 43
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.87 E-value=2.1e-20 Score=210.51 Aligned_cols=272 Identities=14% Similarity=0.139 Sum_probs=182.0
Q ss_pred CCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCC-------------hH--HH-----------H
Q 004411 188 NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV-------------RD--EI-----------L 241 (755)
Q Consensus 188 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~-------------~~--~i-----------l 241 (755)
.| |+|..|--+...+ .+.+.++++|+++..|.|.-+++.+..+-. +. .+ +
T Consensus 107 ~p--Dv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~ 182 (419)
T cd03806 107 VP--DIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182 (419)
T ss_pred CC--CEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHH
Confidence 56 6554442233322 345556789999999955434454422111 11 01 1
Q ss_pred H--HhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHH
Q 004411 242 K--SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKEL 319 (755)
Q Consensus 242 ~--~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~l 319 (755)
. .+-.||.|...+....+++.+ ..+ ...++.++|+|+|++.|.+...
T Consensus 183 ~~~~~~~aD~ii~~S~~~~~~~~~----~~~----------------~~~~~~vi~~gvd~~~~~~~~~----------- 231 (419)
T cd03806 183 YGLAGSFADVVMVNSTWTRNHIRS----LWK----------------RNTKPSIVYPPCDVEELLKLPL----------- 231 (419)
T ss_pred HHHHhhcCCEEEECCHHHHHHHHH----HhC----------------cCCCcEEEcCCCCHHHhccccc-----------
Confidence 1 134567777766654444432 111 1125778999999988754210
Q ss_pred HHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004411 320 KEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (755)
Q Consensus 320 r~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~ 398 (755)
....++.+|+++||+.+.||+..+|+||.++.+++|+.. .++.|+++|.... .+..++.+++++++++.+..
T Consensus 232 -~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l~--- 304 (419)
T cd03806 232 -DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGLE--- 304 (419)
T ss_pred -ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC---
Confidence 012456799999999999999999999999999887631 2466888885321 11123556777777765432
Q ss_pred CCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc
Q 004411 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC 478 (755)
Q Consensus 399 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 478 (755)
+ .|+|+ +.++.+++.++|+.||+++.||..||||++++||||||. |+|+|..+|.
T Consensus 305 -~--~V~f~-g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~---------------------pvIa~~~ggp 359 (419)
T cd03806 305 -D--KVEFV-VNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGL---------------------IPLAHASGGP 359 (419)
T ss_pred -C--eEEEe-cCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCC---------------------cEEEEcCCCC
Confidence 1 36655 589999999999999999999999999999999999964 7889988886
Q ss_pred cc-ccC------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHH
Q 004411 479 SP-SLS------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVA 528 (755)
Q Consensus 479 ~~-~l~------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 528 (755)
.+ .+. .|++++ |++++|++|.+++++++++++.+.+..++...+++..
T Consensus 360 ~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 360 LLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred chheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 54 443 388874 9999999999999998766655433444444455544
No 44
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.86 E-value=1.1e-19 Score=199.88 Aligned_cols=285 Identities=14% Similarity=0.158 Sum_probs=196.4
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhc---CCCeEEEEEecCCCchhhhhcCCChH-HHHHHhhhCCEEEE
Q 004411 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF---HRVKVGFFLHSPFPSSEIYRTLPVRD-EILKSLLNSDLIGF 252 (755)
Q Consensus 177 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~---~~~~i~~flH~PfP~~e~~r~lp~~~-~il~~ll~~Dligf 252 (755)
+.+.+.+ +..+| |+|++|++....++.++..+. .++++.+++|..-.. ....-+... -+...+..+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 3444444 34455 899999876555555544332 267888888853111 011112112 22334567899999
Q ss_pred eCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEE
Q 004411 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVI 329 (755)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 329 (755)
.+....+.+.... + ...++.++|+|+|...|.+... ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~~----~----------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYELF----D----------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHhc----C----------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEE
Confidence 9887766654311 1 1235778999999887754211 1233343 468899
Q ss_pred EEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecC
Q 004411 330 LGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409 (755)
Q Consensus 330 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~ 409 (755)
+++||+.+.||+..+++|++++.++ ++++ |+++|. +++..+ +.+++.+.+.. + .|.+++
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~----~--~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSP----AERLARELGLQ----D--DVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHH----HHHHHHHcCCC----c--eEEEec-
Confidence 9999999999999999999988654 3343 777773 333333 34444443221 1 366664
Q ss_pred CCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcE
Q 004411 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI 486 (755)
Q Consensus 410 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai 486 (755)
. .+++..+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. .|+
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~---------------------PvI~s~~~~~~e~i~~~~~G~ 316 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACGV---------------------PVVASNAGGIPEVVKHGETGF 316 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC---------------------CEEEeCCCCchhhhcCCCceE
Confidence 3 46899999999999999999999999999999975 899999999988883 489
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhH-hhhcCHHHHHHHHHHHHH
Q 004411 487 RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 539 (755)
+++|.|++++|++|.++++++ +++....++++++ ...+++...++.+.+-++
T Consensus 317 ~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 317 LVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred EcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999854 4556666677877 456888888888876654
No 45
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.86 E-value=2.9e-20 Score=209.21 Aligned_cols=358 Identities=16% Similarity=0.161 Sum_probs=205.4
Q ss_pred ccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEe
Q 004411 144 HYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLH 222 (755)
Q Consensus 144 ~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH 222 (755)
.-||-.|+--. |..+..+++..--.|.. ..|-....+. .....|++|.||++......+||++.++++.+|+.|
T Consensus 106 ~~lW~~~~i~s---~~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH 180 (590)
T cd03793 106 GELWELCGIGS---PEGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH 180 (590)
T ss_pred HHHHHHcCCCC---CCCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEec
Confidence 34698888532 22234455443334421 1122222222 112359999999999999999998889999999999
Q ss_pred cCCCchhhhhcCCCh-HHHHHHhhhCCEEEEeC-------HHHHHHHHH-----HHhhHhCccccccCceeEEEEcCeEE
Q 004411 223 SPFPSSEIYRTLPVR-DEILKSLLNSDLIGFHT-------FDYARHFLS-----SCSRMLGLNYESKRGYIGLDYFGRTV 289 (755)
Q Consensus 223 ~PfP~~e~~r~lp~~-~~il~~ll~~Dligf~t-------~~~~~~Fl~-----~~~r~lg~~~~~~~~~~~i~~~gr~~ 289 (755)
- .++-|.+-.. .++-. ++-.|.- .-+.++.++ .+++++.++..+..+. ....++..
T Consensus 181 A----T~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E~--~~Ll~~~p 249 (590)
T cd03793 181 A----TLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYEA--EHLLKRKP 249 (590)
T ss_pred c----cccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHHH--HHHhCCCC
Confidence 4 3444431110 00000 0000000 001122111 1222222221111110 11223332
Q ss_pred EEEEEeccCCcccccccccCc----hhHHHHH-----HHHHHc---CCceEEEE-eccccc-cCChHHHHHHHHHHHHhC
Q 004411 290 SIKILPVGIHMGQFESIMSLD----VTGQKVK-----ELKEKF---DGKIVILG-VDDMDL-FKGISLKFLAMGQLLEQH 355 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~----~~~~~~~-----~lr~~~---~~~~vil~-VdRld~-~KGi~~~l~A~~~ll~~~ 355 (755)
.+ |+|||||++.|.+...-. ..++++. .++.+| .+++++++ +||+++ .||++.+|+|+.++-..-
T Consensus 250 d~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l 328 (590)
T cd03793 250 DV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLL 328 (590)
T ss_pred CE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHH
Confidence 23 899999999997642110 0111222 234544 36788888 799999 999999999999985521
Q ss_pred CCC-CCcEEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc------------------------------
Q 004411 356 PDL-RGKVVLVQITNPARSSG---------KDVQDLLSDTNRIAEEINLN------------------------------ 395 (755)
Q Consensus 356 P~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~~i~~lv~~In~~------------------------------ 395 (755)
..- .+..|+..+..|+...+ .-.+++++.++++..+|+.+
T Consensus 329 ~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~ 408 (590)
T cd03793 329 KVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIF 408 (590)
T ss_pred HhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHH
Confidence 111 12223334445654331 12344556666665555544
Q ss_pred --------------------------------cC-CCCCccEEEecCCCC------hhhHHHHHHhCcEEEEcCCCcCCC
Q 004411 396 --------------------------------FG-KPGYEPIVIIKEPLS------TQDKVPYYAIAECCVVNCVRDGMN 436 (755)
Q Consensus 396 --------------------------------~g-~~~~~pV~~~~~~v~------~~el~aly~~ADv~vvtS~~EG~n 436 (755)
+. ..+-..|+|....++ ..+...+|+.||+||+||++||||
T Consensus 409 ~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG 488 (590)
T cd03793 409 ALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWG 488 (590)
T ss_pred hhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCC
Confidence 10 012223555443333 235889999999999999999999
Q ss_pred ccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc----cccC----CcEEeC-------CCCHHHHHHHHH
Q 004411 437 LVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSLS----GAIRVN-------PWNVDAVADAMD 501 (755)
Q Consensus 437 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~ai~Vn-------P~d~~~~A~ai~ 501 (755)
++++||||||. |+|+|..+|.. +.+. .|+.|. +.+++++|++|.
T Consensus 489 ~~~lEAma~G~---------------------PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~ 547 (590)
T cd03793 489 YTPAECTVMGI---------------------PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMY 547 (590)
T ss_pred cHHHHHHHcCC---------------------CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHH
Confidence 99999999975 89999999984 4432 378887 566788999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
+.++++..++........+.....+|.+-+..|++.-.
T Consensus 548 ~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 548 EFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99977644433332233355667888888887776544
No 46
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.86 E-value=8.6e-20 Score=205.40 Aligned_cols=290 Identities=12% Similarity=0.083 Sum_probs=191.1
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeE-EEEEecCCCchhhhhcCCChHHHH----HHhhhCCEEEEeCHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKV-GFFLHSPFPSSEIYRTLPVRDEIL----KSLLNSDLIGFHTFD 256 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~r~lp~~~~il----~~ll~~Dligf~t~~ 256 (755)
.++...+| |+||.|++...+++.+..... .+++ +...|. ++... +..++ +.+..++++.-.+.
T Consensus 274 ~~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd- 341 (578)
T PRK15490 274 PHLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD- 341 (578)
T ss_pred HHHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-
Confidence 34444566 899999999877766665544 4555 455675 32211 11211 11333444333222
Q ss_pred HHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccc
Q 004411 257 YARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDM 335 (755)
Q Consensus 257 ~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRl 335 (755)
+..+.....+.+.. .+.....+|.++|||||+++|.+....+ ......++..+ .+.++|++|+|+
T Consensus 342 ~v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl 407 (578)
T PRK15490 342 FMSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRF 407 (578)
T ss_pred hhhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEE
Confidence 22222211111110 0112345789999999999987642111 11112223333 355788999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhh
Q 004411 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (755)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 415 (755)
.+.||...+++|+.++++++|+++ |+++| +|+. ++++++++.+.+.. ..|+|++ . .++
T Consensus 408 ~~~Kg~~~LI~A~a~llk~~pdir----LvIVG-----dG~~----~eeLk~la~elgL~------d~V~FlG-~--~~D 465 (578)
T PRK15490 408 VGDKNPFAWIDFAARYLQHHPATR----FVLVG-----DGDL----RAEAQKRAEQLGIL------ERILFVG-A--SRD 465 (578)
T ss_pred ehhcCHHHHHHHHHHHHhHCCCeE----EEEEe-----Cchh----HHHHHHHHHHcCCC------CcEEECC-C--hhh
Confidence 999999999999999999998866 88887 3443 24555566554321 1377664 3 578
Q ss_pred HHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004411 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 416 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (755)
+..+|+.||+||+||.+|||+++++||||||. |+|+|..+|+.+.+. +|++|+|.|
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl---------------------PVVATdvGG~~EiV~dG~nG~LVp~~D 524 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV---------------------PVISTPAGGSAECFIEGVSGFILDDAQ 524 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCC---------------------CEEEeCCCCcHHHcccCCcEEEECCCC
Confidence 99999999999999999999999999999975 899999999998873 599999999
Q ss_pred HHHHHHHHHHHhcCCH--HHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 493 VDAVADAMDSALQMEN--QEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
++++++++..+..+.. .++....++.++++. .+++..-++.|++.++.
T Consensus 525 ~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 525 TVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 9999998854333221 233345567888885 58999988888877654
No 47
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.86 E-value=2.4e-19 Score=201.31 Aligned_cols=281 Identities=15% Similarity=0.153 Sum_probs=196.3
Q ss_pred CCEEEEeCCccchH-H-HHHHhhcCCCeEEEEEecCCCchhhhhc-CC--ChHH----HHHH-hhhCCEEEEeCHHHHHH
Q 004411 191 EDYVWIHDYHLMVL-P-SFLRKRFHRVKVGFFLHSPFPSSEIYRT-LP--VRDE----ILKS-LLNSDLIGFHTFDYARH 260 (755)
Q Consensus 191 ~DiVwvhDyhl~ll-p-~~lr~~~~~~~i~~flH~PfP~~e~~r~-lp--~~~~----il~~-ll~~Dligf~t~~~~~~ 260 (755)
.|+||+|...+... . ..+++ ..+.++++..|--||..-.-.. .+ .... +.+. +-.+|.|...+....+.
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~ 185 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNK 185 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHH
Confidence 39999998665422 2 23443 3456788777765653211000 10 0011 1111 34588888888876665
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 337 (755)
+.+ .+ ....++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+
T Consensus 186 ~~~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~ 240 (412)
T PRK10307 186 ARE-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGE 240 (412)
T ss_pred HHH-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccc
Confidence 542 12 12346888999999998865321 1123455666 35689999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|++++ +++|+++ |+++| +|+.. +++++++++.+. ..|+|+ |.++.+++.
T Consensus 241 ~kg~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~----~~l~~~~~~~~l-------~~v~f~-G~~~~~~~~ 298 (412)
T PRK10307 241 KQGLELVIDAARRL-RDRPDLI----FVICG-----QGGGK----ARLEKMAQCRGL-------PNVHFL-PLQPYDRLP 298 (412)
T ss_pred ccCHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhH----HHHHHHHHHcCC-------CceEEe-CCCCHHHHH
Confidence 99999999999876 4566554 88887 34433 344555544322 137755 689999999
Q ss_pred HHHHhCcEEEEcCCCcCCCcc----ceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc--cccc-CCcEEeCC
Q 004411 418 PYYAIAECCVVNCVRDGMNLV----PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPSL-SGAIRVNP 490 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~ai~VnP 490 (755)
.+|+.||++++||..|+++++ .+|||+||. |+|+|..+|. .+.+ .+|++++|
T Consensus 299 ~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~---------------------PVi~s~~~g~~~~~~i~~~G~~~~~ 357 (412)
T PRK10307 299 ALLKMADCHLLPQKAGAADLVLPSKLTNMLASGR---------------------NVVATAEPGTELGQLVEGIGVCVEP 357 (412)
T ss_pred HHHHhcCEeEEeeccCcccccCcHHHHHHHHcCC---------------------CEEEEeCCCchHHHHHhCCcEEeCC
Confidence 999999999999999996554 589999975 8899988774 3444 47999999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHHH
Q 004411 491 WNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 491 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~ 541 (755)
.|++++|++|.++++++ +++..+.++.++++. .+++...+++|++.+++.
T Consensus 358 ~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 358 ESVEALVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999999999865 566777788898886 589999999999888765
No 48
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.85 E-value=1e-19 Score=198.77 Aligned_cols=257 Identities=13% Similarity=0.122 Sum_probs=175.7
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-HHhhhCCEEEEeCHHHHHHHH
Q 004411 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-KSLLNSDLIGFHTFDYARHFL 262 (755)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-~~ll~~Dligf~t~~~~~~Fl 262 (755)
.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+...+....+.+.
T Consensus 76 ~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 153 (358)
T cd03812 76 IKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLF 153 (358)
T ss_pred HhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 333444 99999999876777766666555556777887764433222111100011 112345666665554444433
Q ss_pred HHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccC
Q 004411 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFK 339 (755)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K 339 (755)
.. ....++.++|+|||.+.+..... ..+ . ++++ .++.+|+++||+++.|
T Consensus 154 ~~---------------------~~~~~~~vi~ngvd~~~~~~~~~---~~~---~-~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 154 GK---------------------VKNKKFKVIPNGIDLEKFIFNEE---IRK---K-RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred hC---------------------CCcccEEEEeccCcHHHcCCCch---hhh---H-HHHcCCCCCCEEEEEEecccccc
Confidence 20 11246788999999988864321 111 1 2222 5788999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 340 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
|+..+++|+..+.+++|+++ |+++|. ++..+. +++.+++.+. . ..|.+++ . .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~----~~~~~~~~~~----~--~~v~~~g-~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEE----IKKKVKELGL----E--DKVIFLG-V--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHH----HHHHHHhcCC----C--CcEEEec-c--cCCHHHH
Confidence 99999999999999998866 888873 343333 3344433221 1 1366554 3 7789999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVA 497 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A 497 (755)
|+.||++|+||..||||++++||||||. |+|+|+.+|..+.+. ++++..+.+++++|
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G~---------------------PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a 322 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASGL---------------------PCILSDTITKEVDLTDLVKFLSLDESPEIWA 322 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhCC---------------------CEEEEcCCchhhhhccCccEEeCCCCHHHHH
Confidence 9999999999999999999999999975 899999999988884 35666666789999
Q ss_pred HHHHHHhcCCHHHHHH
Q 004411 498 DAMDSALQMENQEKIL 513 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~ 513 (755)
++|.+++++++..+..
T Consensus 323 ~~i~~l~~~~~~~~~~ 338 (358)
T cd03812 323 EEILKLKSEDRRERSS 338 (358)
T ss_pred HHHHHHHhCcchhhhh
Confidence 9999999998754443
No 49
>PLN02949 transferase, transferring glycosyl groups
Probab=99.85 E-value=1.8e-19 Score=204.39 Aligned_cols=314 Identities=15% Similarity=0.142 Sum_probs=209.5
Q ss_pred cccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCc-cchHHHHHHhhcCCCeEEE
Q 004411 141 FCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH-LMVLPSFLRKRFHRVKVGF 219 (755)
Q Consensus 141 f~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyh-l~llp~~lr~~~~~~~i~~ 219 (755)
+-..-.||-||.+.. .-...|.++..+.+ +. |.|||-.-- ..-+| ++| +.++||++
T Consensus 109 ~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 334556777776532 22566777665432 22 348884321 12223 344 33789999
Q ss_pred EEecCCCchhhhhcCCCh-------------------HH----H---HHH--hhhCCEEEEeCHHHHHHHHHHHhhHhCc
Q 004411 220 FLHSPFPSSEIYRTLPVR-------------------DE----I---LKS--LLNSDLIGFHTFDYARHFLSSCSRMLGL 271 (755)
Q Consensus 220 flH~PfP~~e~~r~lp~~-------------------~~----i---l~~--ll~~Dligf~t~~~~~~Fl~~~~r~lg~ 271 (755)
..|.|.-+.+....+-.+ +. . +.. +-.+|.|...+....+++.+ ..+
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~- 240 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWR- 240 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcC-
Confidence 999776565443322000 00 0 111 24567777766655545432 111
Q ss_pred cccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHH
Q 004411 272 NYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351 (755)
Q Consensus 272 ~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 351 (755)
...++.++++|+|.+.+... + . +...+++++++|||+.+.||+..+|+||.++
T Consensus 241 ---------------~~~~i~vvyp~vd~~~~~~~---~-~--------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 241 ---------------IPERIKRVYPPCDTSGLQAL---P-L--------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred ---------------CCCCeEEEcCCCCHHHcccC---C-c--------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 11256778899998766321 1 0 0113467899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCC
Q 004411 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV 431 (755)
Q Consensus 352 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 431 (755)
+++.++-..++.|+++|... .++..++.+++++++++.+.. + .|.|+ +.++.+++.++|+.||+++.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f~-g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD----G--DVEFH-KNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC----C--cEEEe-CCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543221234588888542 122234456677777665332 1 36765 68999999999999999999999
Q ss_pred CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc-ccC------CcEEeCCCCHHHHHHHHHHHh
Q 004411 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP-SLS------GAIRVNPWNVDAVADAMDSAL 504 (755)
Q Consensus 432 ~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~------~ai~VnP~d~~~~A~ai~~aL 504 (755)
.||||++++||||||. |+|+|..+|..+ .+. .|++++ |++++|++|.+++
T Consensus 364 ~E~FGivvlEAMA~G~---------------------PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll 420 (463)
T PLN02949 364 DEHFGISVVEYMAAGA---------------------VPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVL 420 (463)
T ss_pred cCCCChHHHHHHHcCC---------------------cEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHH
Confidence 9999999999999964 899999888753 332 377774 9999999999999
Q ss_pred cCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHH
Q 004411 505 QMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (755)
Q Consensus 505 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 542 (755)
+++++++++..++.++++.++++..-++++++.+....
T Consensus 421 ~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 421 RMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred hCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 99877888888888999999999998888887776543
No 50
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.85 E-value=1.3e-19 Score=201.21 Aligned_cols=281 Identities=16% Similarity=0.162 Sum_probs=188.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHH---------HhhhCCEEEEeCHHHHHH
Q 004411 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK---------SLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~---------~ll~~Dligf~t~~~~~~ 260 (755)
..|+|++|+..... + +++.. .+.++.++.|.| ..........-..+.+ .+-.+|.|...+......
T Consensus 94 ~~Dvi~~~~~~~~~-~-~~~~~-~~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~ 168 (392)
T cd03805 94 KYDVFIVDQVSACV-P-LLKLF-SPSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASV 168 (392)
T ss_pred CCCEEEEcCcchHH-H-HHHHh-cCCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHH
Confidence 35999998866432 2 23322 237899999954 2211110011111111 134477877766654443
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (755)
+... ++. .....+.++|+|||.+.|.+..... ..+.....+++.+|+++||+.+.||
T Consensus 169 ~~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg 225 (392)
T cd03805 169 FKKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKN 225 (392)
T ss_pred HHHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCC
Confidence 3321 110 0011235789999998886532110 0111112257789999999999999
Q ss_pred hHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhcccCCCCCccEEEecCCCChhhH
Q 004411 341 ISLKFLAMGQLLEQH---PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE-INLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 341 i~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~-In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
+..+++|++++.++. |+++ |+++|..... ..+..++.+++++++++ .+.. ..|+|+ |.++.+++
T Consensus 226 ~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~f~-g~~~~~~~ 293 (392)
T cd03805 226 IALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVIFL-PSISDSQK 293 (392)
T ss_pred hHHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEEEe-CCCChHHH
Confidence 999999999998876 6654 8888853321 12223455666777655 3221 136655 68999999
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~ 493 (755)
..+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +|++++| |+
T Consensus 294 ~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~---------------------PvI~s~~~~~~e~i~~~~~g~~~~~-~~ 351 (392)
T cd03805 294 ELLLSSARALLYTPSNEHFGIVPLEAMYAGK---------------------PVIACNSGGPLETVVDGETGFLCEP-TP 351 (392)
T ss_pred HHHHhhCeEEEECCCcCCCCchHHHHHHcCC---------------------CEEEECCCCcHHHhccCCceEEeCC-CH
Confidence 9999999999999999999999999999975 899999999888773 4888887 99
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHH
Q 004411 494 DAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKS 533 (755)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~ 533 (755)
+++|++|.++++.++ +++.+.++.++++. .+++...+++
T Consensus 352 ~~~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 352 EEFAEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 999999999999764 56666777888874 5777777664
No 51
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.85 E-value=1.4e-20 Score=198.68 Aligned_cols=163 Identities=18% Similarity=0.196 Sum_probs=126.9
Q ss_pred CceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCC
Q 004411 584 NSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~ 661 (755)
..++|++||||||++.. |.++.++++++++|++|++++++.|+|+|||++..+.++++.+ ++.++++||++++..++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~ 91 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING 91 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC
Confidence 36899999999999854 3466889999999999998789999999999999999999875 47899999999987643
Q ss_pred CceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCe
Q 004411 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQH 741 (755)
Q Consensus 662 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~ 741 (755)
.|.. ...+.+|.+.+...++.+..+++|+++|.|+.+++|||+.++ +- .....++...+.+.+. .+.+.+|+.
T Consensus 92 -~~~~--~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-~~~~~~l~~~i~~~~~--~~~~~~g~~ 164 (266)
T PRK10187 92 -KTHI--VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-EDALLALAQRITQIWP--QLALQPGKC 164 (266)
T ss_pred -Ceee--ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-HHHHHHHHHHHHhhCC--ceEEeCCCE
Confidence 3432 134455666666667777888999999999999999999873 21 1222334444443332 367789999
Q ss_pred EEEEEeCCCCCCC
Q 004411 742 IVEVKPQVCQHQS 754 (755)
Q Consensus 742 ~VEV~p~gvnKG~ 754 (755)
++||+|+++|||+
T Consensus 165 ~lEi~p~g~~Kg~ 177 (266)
T PRK10187 165 VVEIKPRGTNKGE 177 (266)
T ss_pred EEEeeCCCCCHHH
Confidence 9999999999985
No 52
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.85 E-value=8.6e-20 Score=214.07 Aligned_cols=276 Identities=15% Similarity=0.113 Sum_probs=182.5
Q ss_pred CEEEEeCCccchHHHHHHhhcCCCeEEE-EEecCCCc---hhhhhcCCChHHHHHHhhhCCEEEEe--CHHHHHHHHHHH
Q 004411 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGF-FLHSPFPS---SEIYRTLPVRDEILKSLLNSDLIGFH--TFDYARHFLSSC 265 (755)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP~---~e~~r~lp~~~~il~~ll~~Dligf~--t~~~~~~Fl~~~ 265 (755)
|+|++|++.-.++..+..+.. ++|+.+ .+|. +|. .+.++. ....+.+.+..++.+.+. +....+.+..
T Consensus 402 DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~-- 475 (694)
T PRK15179 402 SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD-- 475 (694)
T ss_pred cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--
Confidence 999999998877777666543 456544 5564 221 121110 011122333333433322 2222233321
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCChHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLK 344 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~ 344 (755)
.++ ....+|.++|+|||++.|.+. +........++... .+..+|++|||+++.||+..+
T Consensus 476 --~~g---------------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~L 535 (694)
T PRK15179 476 --WLG---------------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLW 535 (694)
T ss_pred --HcC---------------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHH
Confidence 112 223578899999999888542 11111112222222 246789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004411 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (755)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (755)
++||.++++++|+++ |+++|. |+. ++++++++++.+.. + .|+|+ |.. +++..+|+.||
T Consensus 536 I~A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~----~--~V~fl-G~~--~dv~~ll~aaD 593 (694)
T PRK15179 536 VEAAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG----E--RILFT-GLS--RRVGYWLTQFN 593 (694)
T ss_pred HHHHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC----C--cEEEc-CCc--chHHHHHHhcC
Confidence 999999999999876 888884 332 24456666655432 1 25654 444 57999999999
Q ss_pred EEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH--HHHHHH
Q 004411 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV--DAVADA 499 (755)
Q Consensus 425 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~--~~~A~a 499 (755)
|+|+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|+ ++++++
T Consensus 594 v~VlpS~~Egfp~vlLEAMA~G~---------------------PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~a 652 (694)
T PRK15179 594 AFLLLSRFEGLPNVLIEAQFSGV---------------------PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEA 652 (694)
T ss_pred EEEeccccccchHHHHHHHHcCC---------------------eEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHH
Confidence 99999999999999999999975 899999999998883 4999998885 689999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQD 537 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 537 (755)
|.+++...... ....++.++++. .+++..-++.+++-
T Consensus 653 L~~ll~~l~~~-~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 653 LARIHDMCAAD-PGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHhChhcc-HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99888764322 233456777774 67887777776643
No 53
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.85 E-value=2.6e-19 Score=194.76 Aligned_cols=278 Identities=19% Similarity=0.201 Sum_probs=191.8
Q ss_pred CCEEEEeCCccch---HHHHHHh--hcCCCeEEEEEecCCCchhhhhcCCChHHHHH-HhhhCCEEEEeCHHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMV---LPSFLRK--RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 191 ~DiVwvhDyhl~l---lp~~lr~--~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~-~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
.|+|++|+++-.. ....+.. +..+.++.+.+|.+.+.... .....+.+ .+-.+|.|.+.+.+.++.+...
T Consensus 77 ~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 152 (366)
T cd03822 77 PDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLLR 152 (366)
T ss_pred CCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHhh
Confidence 3899998733211 1111111 23678999999986222111 11122222 2456899988875555554421
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHH
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 344 (755)
. . ..++.++|+|+|...+.... . .++ .....++.+|+++||+.+.||+..+
T Consensus 153 ~--------------------~-~~~~~~i~~~~~~~~~~~~~------~-~~~-~~~~~~~~~i~~~G~~~~~K~~~~l 203 (366)
T cd03822 153 A--------------------Y-PEKIAVIPHGVPDPPAEPPE------S-LKA-LGGLDGRPVLLTFGLLRPYKGLELL 203 (366)
T ss_pred c--------------------C-CCcEEEeCCCCcCcccCCch------h-hHh-hcCCCCCeEEEEEeeccCCCCHHHH
Confidence 0 0 24678899999987765421 0 111 1122567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004411 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (755)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (755)
++|++++.+++|+++ |+++|... ........+..+++.+.+.. ..|+++++.++.+++..+|+.||
T Consensus 204 l~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad 269 (366)
T cd03822 204 LEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAAD 269 (366)
T ss_pred HHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcC
Confidence 999999988888765 88777422 11111111111223333221 13777766699999999999999
Q ss_pred EEEEcCCCc--CCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--CcEEeCCCCHHHHHHH
Q 004411 425 CCVVNCVRD--GMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVNPWNVDAVADA 499 (755)
Q Consensus 425 v~vvtS~~E--G~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~VnP~d~~~~A~a 499 (755)
++++||..| |++++++|||+||. |+|+|..+| .+.+ . .|++++|.|++++|++
T Consensus 270 ~~v~ps~~e~~~~~~~~~Ea~a~G~---------------------PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~ 327 (366)
T cd03822 270 VVVLPYRSADQTQSGVLAYAIGFGK---------------------PVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEA 327 (366)
T ss_pred EEEecccccccccchHHHHHHHcCC---------------------CEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHH
Confidence 999999999 99999999999975 899999888 6666 2 5899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
|.++++++ +++.++.++.++++.++++..+++.+.+-+
T Consensus 328 l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 328 IRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999965 456667778899999999999999887654
No 54
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.84 E-value=1.8e-19 Score=195.91 Aligned_cols=273 Identities=18% Similarity=0.155 Sum_probs=196.4
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch--hhhhc---CCChHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS--EIYRT---LPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~~r~---lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
-|+||+|++..... +..+.++.+.+|-.+|.. +.+.. ...+......+..+|.+.+.+...++.+.+..
T Consensus 86 ~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~ 159 (365)
T cd03809 86 LDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL 159 (365)
T ss_pred CCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh
Confidence 39999998877665 456789999999765422 11110 11222334456778999888877666665421
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
+. ...++.++|+|+|...+..... .. ........++++|+++||+.+.||+..++
T Consensus 160 ----~~---------------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l 214 (365)
T cd03809 160 ----GV---------------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLL 214 (365)
T ss_pred ----Cc---------------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHH
Confidence 11 1236778999999987754311 11 11112235788999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (755)
+|+..+.+.+|+.+ |+++|... .........+ .+. +. ...+.+.+.++.+++..+|+.||+
T Consensus 215 ~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~----~~---~~~v~~~g~~~~~~~~~~~~~~d~ 275 (365)
T cd03809 215 EAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL----GL---GDRVRFLGYVSDEELAALYRGARA 275 (365)
T ss_pred HHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc----CC---CCeEEECCCCChhHHHHHHhhhhh
Confidence 99999998887555 88777432 1111222222 121 11 123345679999999999999999
Q ss_pred EEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHh
Q 004411 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSAL 504 (755)
Q Consensus 426 ~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL 504 (755)
+++||..||++++++|||+||. |+|+|+.+|..+.+. +|+.++|.|+++++++|.+++
T Consensus 276 ~l~ps~~e~~~~~~~Ea~a~G~---------------------pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~ 334 (365)
T cd03809 276 FVFPSLYEGFGLPVLEAMACGT---------------------PVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLL 334 (365)
T ss_pred hcccchhccCCCCHHHHhcCCC---------------------cEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999975 899999988888774 789999999999999999998
Q ss_pred cCCHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 505 QMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 505 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
+.+ +.+....+..++++.++++..++++++
T Consensus 335 ~~~-~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 335 EDP-ALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 754 566666677788889999999998875
No 55
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.84 E-value=5.3e-19 Score=190.98 Aligned_cols=280 Identities=15% Similarity=0.175 Sum_probs=193.6
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh-hhCCEEEEeCHHHHHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l-l~~Dligf~t~~~~~~Fl~ 263 (755)
+..++ |+|++|+++......+........++.+..|..++...-. ..+....+.+.+ -.+|.+...+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 33455 8999999998777766666546788999999765442100 001111121211 2356665555544333332
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (755)
. +. ...++.++|+|+|...+.+.... ...+++++ .++.+|+++||+++.||
T Consensus 154 ~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----GY---------------PPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----CC---------------ChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 12367789999999887653211 12233444 46788999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH-HHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE-EINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~-~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
+..+++|+..+.+++|+++ |+++|... ..... ..... .. +..+ .|.+++ +.+++..+
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~----~~~~~~~~----~~~~--~v~~~g---~~~~~~~~ 265 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANL----ELLALKEL----GLED--KVILLG---ERSDVPAL 265 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHH----HHHHHHhc----CCCc--eEEEcc---ccccHHHH
Confidence 9999999999988887765 88777432 22122 22222 22 2111 255543 35789999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVAD 498 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ 498 (755)
|+.||++++||..||+|++++|||+||. |+|+|+.+|..+.+. +|+++++.|++++++
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g~---------------------PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~ 324 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACGL---------------------PVVATDVGDNAELVGDTGFLVPPGDPEALAE 324 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcCC---------------------CEEEcCCCChHHHhhcCCEEeCCCCHHHHHH
Confidence 9999999999999999999999999975 899999999888885 599999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHH
Q 004411 499 AMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQD 537 (755)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~ 537 (755)
+|.++++++ +++....+++++++.+ +++..-++.|.+-
T Consensus 325 ~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 325 AIEALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999986 4666667778888764 7888888877754
No 56
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.84 E-value=1.4e-19 Score=202.65 Aligned_cols=187 Identities=12% Similarity=-0.004 Sum_probs=129.7
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEecc-c-cccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDD-M-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR-l-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
.++.++|+|||++.+...... ...+ .-.++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-------~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-------PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCcccccccccc-------cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 368889999998543221100 0011 1246788999999 4 4789999999999875 233 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|.. +... . ..|.+++...+.+++..+|+.||+||+||..|||++|++||||||
T Consensus 277 vG~g-----~~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKF-----SPFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCC-----Cccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 8742 1100 0 025555433467899999999999999999999999999999997
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-h
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-S 523 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~ 523 (755)
. |+|+|+.+|+.+.+. +|++|+|.|++++|+++...+... +.....+..++.+ .
T Consensus 331 ~---------------------PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~ 387 (405)
T PRK10125 331 V---------------------PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRA 387 (405)
T ss_pred C---------------------CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHH
Confidence 5 899999999988873 599999999999998653322110 0000123355554 4
Q ss_pred hcCHHHHHHHHHHHHH
Q 004411 524 SHDVAYWAKSIDQDLE 539 (755)
Q Consensus 524 ~~~~~~W~~~~l~~l~ 539 (755)
.+++..-++++++-.+
T Consensus 388 ~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 388 AYSGQQMLEEYVNFYQ 403 (405)
T ss_pred hCCHHHHHHHHHHHHH
Confidence 5888888888876543
No 57
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.84 E-value=8.6e-19 Score=196.76 Aligned_cols=271 Identities=13% Similarity=0.093 Sum_probs=191.2
Q ss_pred CCCCEEEEeCCccc-hHHHHHHhhcCCCeEEEEEecCC--CchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 189 PDEDYVWIHDYHLM-VLPSFLRKRFHRVKVGFFLHSPF--PSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 189 ~~~DiVwvhDyhl~-llp~~lr~~~~~~~i~~flH~Pf--P~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
++.|+++.|-++.. ....+++++....++....|-.. +.......++.++.+ +-.+|.|.+.+....+.+...
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~- 201 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR- 201 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH-
Confidence 44577777655543 33345666666666888888432 111111111222222 356899998888766554321
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
.+ ....++.++|+|++...+.+. + ...++..|+++||+.+.||+..++
T Consensus 202 ---~~---------------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~li 249 (407)
T cd04946 202 ---YP---------------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDLII 249 (407)
T ss_pred ---CC---------------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHHHH
Confidence 11 123467789999998766431 0 114567899999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh--C
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI--A 423 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~--A 423 (755)
+|+.++.+++|+.. +.++.+|. |++.+ ++++++.+. +.. ..|+ +.|.++.+|+.++|+. |
T Consensus 250 ~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~----~l~~~~~~~----~~~--~~V~-f~G~v~~~e~~~~~~~~~~ 311 (407)
T cd04946 250 KALAALAKARPSIK--IKWTHIGG-----GPLED----TLKELAESK----PEN--ISVN-FTGELSNSEVYKLYKENPV 311 (407)
T ss_pred HHHHHHHHhCCCce--EEEEEEeC-----chHHH----HHHHHHHhc----CCC--ceEE-EecCCChHHHHHHHhhcCC
Confidence 99999999988764 66777773 44433 344444322 111 1255 4579999999999986 7
Q ss_pred cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCC-CCHHHHHHH
Q 004411 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNP-WNVDAVADA 499 (755)
Q Consensus 424 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP-~d~~~~A~a 499 (755)
|+++.||..|||+++++|||+||. |+|+|..+|..+.+. +|++++| .|++++|++
T Consensus 312 ~v~v~~S~~Eg~p~~llEAma~G~---------------------PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~ 370 (407)
T cd04946 312 DVFVNLSESEGLPVSIMEAMSFGI---------------------PVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSS 370 (407)
T ss_pred CEEEeCCccccccHHHHHHHHcCC---------------------CEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHH
Confidence 899999999999999999999975 899999999998884 3788877 489999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 535 (755)
|.+++++ ++++..+.++.++++. .+++..+.++|+
T Consensus 371 I~~ll~~-~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 371 LSKFIDN-EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999985 4577777788888885 578888888775
No 58
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.83 E-value=1.2e-18 Score=199.31 Aligned_cols=271 Identities=14% Similarity=0.082 Sum_probs=182.6
Q ss_pred CCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch-hhhhcC----CChHHHHHHhhhCCEEEEeCHHHHHHHHHH
Q 004411 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS-EIYRTL----PVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~-e~~r~l----p~~~~il~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
+.|++.++--+... +.++ +..+.++++.++|.-.-+. ..-..- +.-+..++.+-.+|.|...|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45888886555433 3333 5567899999999542110 000000 111122334445688777776544433321
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHH
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 344 (755)
... +.+...+|.++|+|++...+.+. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHH
Confidence 111 12223467889999875543210 01234679999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004411 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (755)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (755)
++|+.++.+++|+++ |+++|. |++. +++++++.+.+.. + .|.+. |+ .++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~f~-G~---~~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQAQ----D--YIHLK-GH---RNLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCCC----C--eEEEc-CC---CCHHHHHHhCC
Confidence 999999999999876 888873 4432 4556666554321 1 26654 44 36889999999
Q ss_pred EEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC-CcccccC---CcEEeCC----CC----
Q 004411 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIRVNP----WN---- 492 (755)
Q Consensus 425 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~VnP----~d---- 492 (755)
++|+||.+||||++++||||||. |+|+|... |..+.+. +|++|++ .|
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G~---------------------PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~ 453 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSGL---------------------GMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQI 453 (500)
T ss_pred EEEEcCccccccHHHHHHHHhCC---------------------CEEEecCCCCCHHHccCCCCEEEEeCCccccchhHH
Confidence 99999999999999999999975 89999986 6777773 5899974 34
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
++++|++|.++++ ++++....+..++.++++++..-++++.+-++
T Consensus 454 ~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 454 ITALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8999999999994 34566677788888888888877777765544
No 59
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.83 E-value=9.9e-19 Score=190.31 Aligned_cols=264 Identities=18% Similarity=0.186 Sum_probs=190.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|..+...+..++..+....+..+.+|.+..... +....+-+.+-.+|.+...+....+.+.+. .+
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~~ 150 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----LG 150 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----cC
Confidence 399999987665555555555557888888885422111 111233344567899999888777665531 11
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
....++.++|+|+|.+.|.... .....++..|+++||+.+.||+..+++|+++
T Consensus 151 ---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 151 ---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred ---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1234788899999998875421 0122456789999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+++|+++ |+++|. ++.. .++.+.+.+.+. .+.+.+.+.++.+++.++|+.||++++||
T Consensus 204 l~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s 263 (355)
T cd03799 204 LKDRGIDFR----LDIVGD-----GPLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPS 263 (355)
T ss_pred HhhcCCCeE----EEEEEC-----CccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecc
Confidence 987766654 877773 2222 234444444321 12333567899999999999999999999
Q ss_pred CC------cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHH
Q 004411 431 VR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMD 501 (755)
Q Consensus 431 ~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~ 501 (755)
.. |||+++.+|||+||. |+|+|..+|..+.+. .|++++|.|+++++++|.
T Consensus 264 ~~~~~~~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~ 322 (355)
T cd03799 264 VTAADGDREGLPVVLMEAMAMGL---------------------PVISTDVSGIPELVEDGETGLLVPPGDPEALADAIE 322 (355)
T ss_pred eecCCCCccCccHHHHHHHHcCC---------------------CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHH
Confidence 99 999999999999975 889999888777773 489999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYIS-SHDVAYWAK 532 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~ 532 (755)
++++++. ++..+.+..++++. .+++...++
T Consensus 323 ~~~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 323 RLLDDPE-LRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHhCHH-HHHHHHHHHHHHHHHhcCHHHHhh
Confidence 9998764 45666667777775 466665554
No 60
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.83 E-value=5.4e-19 Score=191.63 Aligned_cols=274 Identities=18% Similarity=0.194 Sum_probs=183.5
Q ss_pred CCEEEEeCCcc-chHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHH------HHHhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHL-MVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI------LKSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~i------l~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
.|+|++|+... ...+.....+..+.++.++.|..++...... -+.+..+ -..+..+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 49999998432 2222222222346888889997665432100 0111111 11123456666665433322211
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (755)
.....++.++|+|+|.+.+..... . .. ++.+ .++++|+++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~~---~----~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALPS---R----GR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcchh---h----hh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 112346788999999988864311 1 11 3333 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 420 (755)
+..+++|+.++.+++|+++ |+++|... ..+ ...++.++.+.+ .. ..|. +.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~---~~~~~~~~~~~~----~~--~~v~-~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE----GGY---RAELKQIAAALG----LE--DRVT-FTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC----cch---HHHHHHHHHhcC----cc--ceEE-EcCCCChHHHHHHH
Confidence 9999999999998888766 88777421 122 122333333322 11 1255 45799999999999
Q ss_pred HhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHH
Q 004411 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVAD 498 (755)
Q Consensus 421 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ 498 (755)
+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. .|++++ .+.+++++
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~---------------------PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 337 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGT---------------------PVVTTDKVPWQELIEYGCGWVVD-DDVDALAA 337 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCC---------------------CEEEcCCCCHHHHhhcCceEEeC-CChHHHHH
Confidence 999999999999999999999999975 899999999888874 355555 46699999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhH-hhhcCHHHHHHHHH
Q 004411 499 AMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (755)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (755)
+|.++++++ +++....++.+++ .+.+++..-++.++
T Consensus 338 ~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 338 ALRRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999987 5677777778888 46678877777664
No 61
>PHA01633 putative glycosyl transferase group 1
Probab=99.83 E-value=6.1e-20 Score=198.40 Aligned_cols=190 Identities=16% Similarity=0.209 Sum_probs=144.3
Q ss_pred EeccCCcccccccccCchhHHHHHHHHHH----cCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 294 LPVGIHMGQFESIMSLDVTGQKVKELKEK----FDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 294 ~p~GId~~~f~~~~~~~~~~~~~~~lr~~----~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
+|+|||++.|.+... ...+++++ +++..++++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~ 191 (335)
T PHA01633 118 VFHGINFKIVENAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH 191 (335)
T ss_pred eeCCCChhhcCccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH
Confidence 567999999875321 11233343 35678899999999999999999999999999998866677776651
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEec--CCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
. ++.+ . +..+ .|.|++ +.++.+++.++|+.||+||+||..||||++++||||||.
T Consensus 192 ------~-------~~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~ 248 (335)
T PHA01633 192 ------K-------QFTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT 248 (335)
T ss_pred ------H-------HHHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC
Confidence 1 1111 1 1111 377664 677899999999999999999999999999999999975
Q ss_pred CCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---------------------CcEEeCCCCHHHHHHHHHHHhcC
Q 004411 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---------------------GAIRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------------------~ai~VnP~d~~~~A~ai~~aL~m 506 (755)
|+|+|..+|..+..+ .|+.+++.|++++|++|.+++.+
T Consensus 249 ---------------------PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 249 ---------------------PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL 307 (335)
T ss_pred ---------------------CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc
Confidence 788888877666432 14578899999999999999887
Q ss_pred CHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 507 ENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 507 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
.+. .+|..+.++..+++++..-+++|+
T Consensus 308 ~~~--~~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 308 QDR--EERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred cCh--hhhhHHHHHHHHhcCHHHHHHHhh
Confidence 643 333456678888999888877765
No 62
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.83 E-value=1.3e-18 Score=188.91 Aligned_cols=267 Identities=18% Similarity=0.264 Sum_probs=185.6
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChH---------HHH-HHhhhCCEEEEe
Q 004411 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---------EIL-KSLLNSDLIGFH 253 (755)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~---------~il-~~ll~~Dligf~ 253 (755)
.+..+| |+|++|+...+........+..++++.+.+|.+++.. ....+... .+. ..+..+|.+...
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 344455 8999998755433333323334789999999887632 22211111 111 223467888877
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEE
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVIL 330 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 330 (755)
+......+.. .+ ...++.++|+|+|...+.+... ...++++ .++++|+
T Consensus 156 s~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEE
Confidence 7764444331 01 1224788999999988765321 1112333 4678899
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004411 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (755)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~ 410 (755)
++||+.+.||+..+++|++++.++.|+++ |+++|. ++.. .++.+++.+.+.. ..|.+ .+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~~-~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELGLA------DRVIF-TGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcCCC------CcEEE-ecc
Confidence 99999999999999999999988767654 887773 2322 3344454443221 12554 578
Q ss_pred CChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEE
Q 004411 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIR 487 (755)
Q Consensus 411 v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~ 487 (755)
++.+++..+|+.||+++.||..||+|++.+|||+||. |+|+|..+|..+.+. +|++
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~---------------------PvI~~~~~~~~~~i~~~~~g~~ 325 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGL---------------------PVVAVDAPGLPDLVADGENGFL 325 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC---------------------cEEEeCCCChhhheecCceeEE
Confidence 9999999999999999999999999999999999965 899999988888773 5899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcC
Q 004411 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHD 526 (755)
Q Consensus 488 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 526 (755)
+++.|. +++++|.++++++. .++.+.++.++++.+++
T Consensus 326 ~~~~~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 326 FPPGDE-ALAEALLRLLQDPE-LRRRLSKNAEESAEKFS 362 (374)
T ss_pred eCCCCH-HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHH
Confidence 999888 99999999999875 44566667788887765
No 63
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.82 E-value=2.5e-18 Score=184.79 Aligned_cols=283 Identities=18% Similarity=0.200 Sum_probs=201.2
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh----cCCChHHHHHHhhhCCEEEEeCHHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR----TLPVRDEILKSLLNSDLIGFHTFDYA 258 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r----~lp~~~~il~~ll~~Dligf~t~~~~ 258 (755)
+.+..++ |+|++|+++...+.. +..+..+.++.+++|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3343344 999999998887665 3445568999999999876432110 00111122233456788888887666
Q ss_pred HHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccc
Q 004411 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDM 335 (755)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRl 335 (755)
+.+.+.. .....++.++|+|+|...+.... ...+... .+++.|+++||+
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecch
Confidence 6555310 11124678899999998875421 1111112 467889999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhh
Q 004411 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (755)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 415 (755)
++.||+..+++|+..+.+++|+++ |+++|. ++.... +.+++.+.+.. ..|.+ .+.++.+|
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~-~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREE----LEALAAELGLG------DRVTF-LGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHH----HHHHHHHhCCC------cceEE-EeccChhh
Confidence 999999999999999988877654 887772 333333 33343332211 13554 46899999
Q ss_pred HHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004411 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 416 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (755)
+..+|+.||++++|+..||++++++|||+||. |+|+|..+|..+.+. .|+++++.|
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~---------------------pvI~~~~~~~~~~~~~~~~g~~~~~~~ 327 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAGL---------------------PVVASDVGGIPEVVEDGETGLLVPPGD 327 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHcCC---------------------cEEEeCCCChhHHhcCCcceEEeCCCC
Confidence 99999999999999999999999999999974 899999998888884 589999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHh-hHhhhcCHHHHHHHHHHHH
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHY-KYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 538 (755)
+++++++|.++++.+. .+....++.+ ...+.+++..+++.+++-+
T Consensus 328 ~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 328 PEALAEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999999999998764 4555555666 4456789999998887643
No 64
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.82 E-value=1.6e-18 Score=188.17 Aligned_cols=273 Identities=16% Similarity=0.154 Sum_probs=192.1
Q ss_pred HHhCCCCCEEEEeCCccc-hHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCCh----HHHHHH-hhhCCEEEEeCHHHH
Q 004411 185 EVINPDEDYVWIHDYHLM-VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR----DEILKS-LLNSDLIGFHTFDYA 258 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~-llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~----~~il~~-ll~~Dligf~t~~~~ 258 (755)
+..+| |+|++|+.... .....+.+ ..++++.+++|..||..-........ ..+.+. .-.+|.+.+.+....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAAR-RLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHH-HcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 44466 89999866443 22233333 34688999999887632211111111 122222 345788888777655
Q ss_pred HHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEecccc
Q 004411 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMD 336 (755)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld 336 (755)
..+.. .. ..++.++|+|+|.+.|.+.... ...++++ .++++|+++||+.
T Consensus 157 ~~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~ 207 (364)
T cd03814 157 DELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLA 207 (364)
T ss_pred HHHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccc
Confidence 42221 00 1256789999999888653221 1122222 4678899999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
+.||+..+++|+.++.++ |+++ |+++|. +++...++ . . ...|.++ +.++.+++
T Consensus 208 ~~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~---~-----~~~v~~~-g~~~~~~~ 260 (364)
T cd03814 208 PEKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A---R-----YPNVHFL-GFLDGEEL 260 (364)
T ss_pred cccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c---c-----CCcEEEE-eccCHHHH
Confidence 999999999999999876 7665 887773 23222221 0 0 1136655 56899999
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~ 493 (755)
..+|+.||++++||..||||++++||||||. |+|+|..+|..+.+. .|++++|.|.
T Consensus 261 ~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~---------------------PvI~~~~~~~~~~i~~~~~g~~~~~~~~ 319 (364)
T cd03814 261 AAAYASADVFVFPSRTETFGLVVLEAMASGL---------------------PVVAPDAGGPADIVTDGENGLLVEPGDA 319 (364)
T ss_pred HHHHHhCCEEEECcccccCCcHHHHHHHcCC---------------------CEEEcCCCCchhhhcCCcceEEcCCCCH
Confidence 9999999999999999999999999999975 899999999888884 4899999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 494 DAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
++++++|.++++.+ +++..+.+..++++.++++..+++.+++.+
T Consensus 320 ~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 320 EAFAAALAALLADP-ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHHcCH-HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999999865 456666677888888899999998887643
No 65
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.82 E-value=2.5e-18 Score=187.15 Aligned_cols=275 Identities=16% Similarity=0.230 Sum_probs=194.5
Q ss_pred CCEEEEeC-CccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcC-CC-------hHHHH-HHhhhCCEEEEeCHHHHHH
Q 004411 191 EDYVWIHD-YHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL-PV-------RDEIL-KSLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 191 ~DiVwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-p~-------~~~il-~~ll~~Dligf~t~~~~~~ 260 (755)
.|+|++|. ..+..++....++..+.++.+.+|..+|........ .. ...+. ..+..+|.+.+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 49999998 344455555444555789999999888754322111 11 11111 2245689999999887776
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (755)
+.. .+ ....++.++|+|+|...+.+.... ...... ....++.+|+++||+...||
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~i~~~G~~~~~k~ 234 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRKE-LGLDDKFVVLYAGNIGRAQG 234 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhhc-cCCCCcEEEEEecCcccccC
Confidence 651 11 112467889999999877653211 001111 11257889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 420 (755)
+..+++|+.++.+. |+++ |+++|. ++....++ +++... + ...|.+++ .++.+++.++|
T Consensus 235 ~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~----~~~~~~----~---~~~v~~~g-~~~~~~~~~~~ 292 (394)
T cd03794 235 LDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELK----ELAKAL----G---LDNVTFLG-RVPKEELPELL 292 (394)
T ss_pred HHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHH----HHHHHc----C---CCcEEEeC-CCChHHHHHHH
Confidence 99999999998776 6554 877763 33333332 222211 1 12477665 89999999999
Q ss_pred HhCcEEEEcCCCcCC-----CccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004411 421 AIAECCVVNCVRDGM-----NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 421 ~~ADv~vvtS~~EG~-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (755)
+.||++++||..|++ ++..+|||+||. |+|+|..+|..+.+. .|+++++.|
T Consensus 293 ~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~---------------------pvi~~~~~~~~~~~~~~~~g~~~~~~~ 351 (394)
T cd03794 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK---------------------PVLASVDGESAELVEEAGAGLVVPPGD 351 (394)
T ss_pred HhhCeeEEeccCcccccccCchHHHHHHHCCC---------------------cEEEecCCCchhhhccCCcceEeCCCC
Confidence 999999999999876 555799999975 899999999988883 489999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHH
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSI 534 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 534 (755)
+++++++|.++++.+ +++..+.++.++++. .+++..+++++
T Consensus 352 ~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 352 PEALAAAILELLDDP-EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999999654 567777778888887 78998888876
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.82 E-value=5.5e-19 Score=200.64 Aligned_cols=318 Identities=11% Similarity=0.118 Sum_probs=188.5
Q ss_pred EeCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC-ccchH-
Q 004411 127 TFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDY-HLMVL- 204 (755)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDy-hl~ll- 204 (755)
+|=++++.+.|......+-.=+-.--.+.++| ++|....- +-..+-... +.+...+| |+||+|.. ||-..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYp---g~~~~~~~-SI~p~gdI~--~~L~~f~P--DVVHLatP~~LGw~~ 450 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKISFYP---GKFSKERR-SIIPAGDTS--QFIPSKDA--DIAILEEPEHLNWYH 450 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEEeec---chhccCCc-cccchHHHH--HHhhccCC--CEEEECCchhhccHH
Confidence 67788888888776653211111000011222 34433221 222222222 22233455 99999887 55555
Q ss_pred -HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHH--HhhHhCccccccCceeE
Q 004411 205 -PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS--CSRMLGLNYESKRGYIG 281 (755)
Q Consensus 205 -p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~--~~r~lg~~~~~~~~~~~ 281 (755)
+....+++. +++..+|+.||. +++.-.. ..++.++ ..++++|+.. |++++.++.....
T Consensus 451 ~Glr~ArKl~--PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~hcD~VIaPS~atq~---- 511 (794)
T PLN02501 451 HGKRWTDKFN--HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAYCHKVLRLSAATQD---- 511 (794)
T ss_pred HHHHHHHHcC--CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhhCCEEEcCCHHHHH----
Confidence 344545543 688899999985 3332111 1111111 1123334433 6666665532211
Q ss_pred EEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcC---CceEEEEeccccccCChHHHHHHHHHHHHhCCCC
Q 004411 282 LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDL 358 (755)
Q Consensus 282 i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~ 358 (755)
+. + ..|.. .+|||++.|.+.... ... ++++ ..+.+++||||.+.||+..+|+|+..+.++.|++
T Consensus 512 --L~-~-~vI~n-VnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv 578 (794)
T PLN02501 512 --LP-K-SVICN-VHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGF 578 (794)
T ss_pred --hc-c-cceee-cccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCe
Confidence 11 1 11211 159999999864221 111 2221 2245899999999999999999999998888876
Q ss_pred CCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCcc
Q 004411 359 RGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLV 438 (755)
Q Consensus 359 ~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv 438 (755)
+ |+++| +|++.+++ ++++.+.+. .|.|+++ .++..++|+.+||||+||.+||||+|
T Consensus 579 r----LvIVG-----DGP~reeL----e~la~eLgL--------~V~FLG~---~dd~~~lyasaDVFVlPS~sEgFGlV 634 (794)
T PLN02501 579 N----LDVFG-----NGEDAHEV----QRAAKRLDL--------NLNFLKG---RDHADDSLHGYKVFINPSISDVLCTA 634 (794)
T ss_pred E----EEEEc-----CCccHHHH----HHHHHHcCC--------EEEecCC---CCCHHHHHHhCCEEEECCCcccchHH
Confidence 5 88887 45654444 444444321 2666543 34556899999999999999999999
Q ss_pred ceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 004411 439 PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516 (755)
Q Consensus 439 ~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~ 516 (755)
++||||||. |+|+|..+|...... ++++ +.|.++++++|.++|.+++ ++ ..++
T Consensus 635 lLEAMA~Gl---------------------PVVATd~pG~e~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~r-l~~~ 689 (794)
T PLN02501 635 TAEALAMGK---------------------FVVCADHPSNEFFRSFPNCLT--YKTSEDFVAKVKEALANEP-QP-LTPE 689 (794)
T ss_pred HHHHHHcCC---------------------CEEEecCCCCceEeecCCeEe--cCCHHHHHHHHHHHHhCch-hh-hHHH
Confidence 999999975 899999988543222 3443 3799999999999999875 22 2222
Q ss_pred HHhhHhhhcCHHHHHHHHHHH
Q 004411 517 KHYKYISSHDVAYWAKSIDQD 537 (755)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~ 537 (755)
. ..+++|..-++++++.
T Consensus 690 a----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 690 Q----RYNLSWEAATQRFMEY 706 (794)
T ss_pred H----HhhCCHHHHHHHHHHh
Confidence 1 2256666666666543
No 67
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.81 E-value=3.4e-18 Score=184.62 Aligned_cols=278 Identities=18% Similarity=0.201 Sum_probs=192.6
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+....+.+....
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG----- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-----
Confidence 4899999555443333333333457889999987654321111 1222233345678999998887776665310
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
....++.++|+|+|...+.+... .....+ ....++.+++++||+++.||+..+++|++.
T Consensus 168 ---------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~ 226 (377)
T cd03798 168 ---------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALAR 226 (377)
T ss_pred ---------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHH
Confidence 11246788999999988865311 011111 112467899999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+++|+++ |+++|. +++... +.++++..+.. ..|. +.+.++.+++..+|+.||++++||
T Consensus 227 ~~~~~~~~~----l~i~g~-----~~~~~~----~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ad~~i~~~ 286 (377)
T cd03798 227 LLKKRPDVH----LVIVGD-----GPLREA----LEALAAELGLE------DRVT-FLGAVPHEEVPAYYAAADVFVLPS 286 (377)
T ss_pred HHhcCCCeE----EEEEcC-----CcchHH----HHHHHHhcCCc------ceEE-EeCCCCHHHHHHHHHhcCeeecch
Confidence 988776654 777763 233222 33333332211 1244 457899999999999999999999
Q ss_pred CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCC
Q 004411 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 431 ~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~ 507 (755)
..||+|++++|||+||. |+|+|+.+|..+.+. +|++++|.|+++++++|.++++++
T Consensus 287 ~~~~~~~~~~Ea~~~G~---------------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 287 LREGFGLVLLEAMACGL---------------------PVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADP 345 (377)
T ss_pred hhccCChHHHHHHhcCC---------------------CEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCc
Confidence 99999999999999975 899999998888773 369999999999999999999987
Q ss_pred HHHHHHHHHHHhhH-hhhcCHHHHHHHHHHHHH
Q 004411 508 NQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 508 ~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 539 (755)
.. .+..+.++. ...+++..+++.+.+.++
T Consensus 346 ~~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 346 WL---RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HH---HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 54 333444444 456788888888776654
No 68
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.81 E-value=1.7e-18 Score=191.32 Aligned_cols=265 Identities=17% Similarity=0.101 Sum_probs=182.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCC-CchhhhhcCCC---hHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF-PSSEIYRTLPV---RDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf-P~~e~~r~lp~---~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
..|++.+|..+.... .+.......+...++|... .....-...++ .+.++..+-.+|.|.+.+..-.+.+...
T Consensus 99 ~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~- 175 (372)
T cd04949 99 KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQKQ- 175 (372)
T ss_pred CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHHH-
Confidence 358998887776554 2223334556677777532 11100001111 2344555667899988888666665431
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
++ ...+|.++|+|++...+.+.. .....+..++++||+.+.||+..++
T Consensus 176 ---~~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li 223 (372)
T cd04949 176 ---FG----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLI 223 (372)
T ss_pred ---hC----------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHH
Confidence 11 011277899999988765421 0113456899999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (755)
+|+.++.+++|+++ |+++|.. ++...+ ..++.+.+. .+ .|.+. | ..+++.++|+.||+
T Consensus 224 ~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~----~~~~~~~~~----~~--~v~~~-g--~~~~~~~~~~~ad~ 281 (372)
T cd04949 224 KAFAKVVKQVPDAT----LDIYGYG-----DEEEKL----KELIEELGL----ED--YVFLK-G--YTRDLDEVYQKAQL 281 (372)
T ss_pred HHHHHHHHhCCCcE----EEEEEeC-----chHHHH----HHHHHHcCC----cc--eEEEc-C--CCCCHHHHHhhhhE
Confidence 99999999999876 8878742 332223 333333222 11 25544 4 35789999999999
Q ss_pred EEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC-CcccccC---CcEEeCCCCHHHHHHHHH
Q 004411 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIRVNPWNVDAVADAMD 501 (755)
Q Consensus 426 ~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~VnP~d~~~~A~ai~ 501 (755)
+|+||..||||++.+|||+||. |+|+|+.+ |..+.+. +|++++|.|++++|++|.
T Consensus 282 ~v~~S~~Eg~~~~~lEAma~G~---------------------PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~ 340 (372)
T cd04949 282 SLLTSQSEGFGLSLMEALSHGL---------------------PVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAII 340 (372)
T ss_pred EEecccccccChHHHHHHhCCC---------------------CEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHH
Confidence 9999999999999999999975 89999887 7777773 589999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (755)
.+++++ +.+..+.++.++...++++..++++
T Consensus 341 ~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 341 ELLNDP-KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHcCH-HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 999976 4566666777777777777666553
No 69
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.80 E-value=5.3e-18 Score=181.60 Aligned_cols=260 Identities=16% Similarity=0.112 Sum_probs=178.3
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|+.+...+...+... ..++.+..|..++...... .+....-..+-.+|.+.+.+......+.
T Consensus 84 ~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~-------- 151 (348)
T cd03820 84 PDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY-------- 151 (348)
T ss_pred CCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh--------
Confidence 399999988822222222221 1478888887765322110 0110122234567888877765441100
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+++|+++
T Consensus 152 --------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 152 --------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred --------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 0112467889999998766431 12457789999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+.+|+++ |+++|. +++... +.+++.+.+.. . .|.+ .+. .+++..+|+.||++++||
T Consensus 203 l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~----~--~v~~-~g~--~~~~~~~~~~ad~~i~ps 260 (348)
T cd03820 203 IAKKHPDWK----LRIVGD-----GPEREA----LEALIKELGLE----D--RVIL-LGF--TKNIEEYYAKASIFVLTS 260 (348)
T ss_pred HHhcCCCeE----EEEEeC-----CCCHHH----HHHHHHHcCCC----C--eEEE-cCC--cchHHHHHHhCCEEEeCc
Confidence 988788765 777773 233222 33344443221 1 2444 443 789999999999999999
Q ss_pred CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc-cC---CcEEeCCCCHHHHHHHHHHHhcC
Q 004411 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-LS---GAIRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 431 ~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l~---~ai~VnP~d~~~~A~ai~~aL~m 506 (755)
..||||++++|||+||. |+|+|+..|..+. +. .|+++++.|+++++++|.+++++
T Consensus 261 ~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~ 319 (348)
T cd03820 261 RFEGFPMVLLEAMAFGL---------------------PVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED 319 (348)
T ss_pred cccccCHHHHHHHHcCC---------------------CEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC
Confidence 99999999999999975 8899987654444 42 58999999999999999999986
Q ss_pred CHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 507 ENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 507 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
+ +.+....++.++.++++++...+++|.
T Consensus 320 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 320 E-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred H-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 5 345555566678888899988888764
No 70
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.80 E-value=1.4e-17 Score=180.32 Aligned_cols=262 Identities=15% Similarity=0.144 Sum_probs=178.2
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~F 261 (755)
++++..++ |+|++|.+..+.++.+...+..++++.+++|-.++.. +....+. ...|.+...+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~---~~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFK---KGGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhc---cCCCEEEEeCHHHHHHH
Confidence 34444455 8999998855544333222334689999999765321 1111111 11288888777655555
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCh
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 341 (755)
.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 42 01 01247888999999988754210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+++|+.++.+ ++.+ |+++|.. .......... +. . ..|. +.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~-----~~~~~~~~~~-------~~--~----~~v~-~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNG-----LELEEESYEL-------EG--D----PRVE-FLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCc-----hhhhHHHHhh-------cC--C----CeEE-EeCCCCHHHHHHHHH
Confidence 999999999866 5544 8877743 2211111111 10 1 1355 456889999999999
Q ss_pred hCcEEEEcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004411 422 IAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (755)
Q Consensus 422 ~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (755)
.||++++||. .||++++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~ 320 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAGV---------------------PVIASDIGGMAELVRDGVNGLLFPPGDAEDLA 320 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCCC---------------------CEEECCCCCHHHHhcCCCcEEEECCCCHHHHH
Confidence 9999999997 7999999999999975 899999999888874 49999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHH
Q 004411 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (755)
++|.++++.+ +.++...+..++.++. ...++++++
T Consensus 321 ~~i~~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 321 AALERLIDDP-DLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHHHhCh-HHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 9999999954 4555555566665543 444444443
No 71
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.80 E-value=4.1e-18 Score=187.93 Aligned_cols=240 Identities=14% Similarity=0.109 Sum_probs=166.2
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhc-CCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRF-HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~ 260 (755)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+...+..-.++
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34444555 899999987766666666543 23456666776554321111 12235688888777655554
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEecccc--cc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMD--LF 338 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld--~~ 338 (755)
+.. .++. ..++.++|+|||.+.+.... + ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 23567789999976553211 0 013467899999996 46
Q ss_pred CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC--ChhhH
Q 004411 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL--STQDK 416 (755)
Q Consensus 339 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v--~~~el 416 (755)
||+..+++|+.++ .+ ++.|+++|. |++.+ ++++++++.|.. ..|+|. |.+ +.+++
T Consensus 195 k~~~~l~~a~~~~---~~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~f~-G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQT---TG----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRIIWH-GWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhh---CC----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEEEe-cccCCcHHHH
Confidence 9999999999876 22 355888883 44433 445555554321 136655 444 45899
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeC-CCCcccccC---CcEEeCCCC
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~ai~VnP~d 492 (755)
.++|+.||++|+||..||||++++||||||. |+|+|+ .+|+.+.+. +|++|+|.|
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~---------------------Pvv~s~~~~g~~eiv~~~~~G~lv~~~d 310 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYGI---------------------PCISSDCMSGPRDIIKPGLNGELYTPGN 310 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcCC---------------------CEEEeCCCCChHHHccCCCceEEECCCC
Confidence 9999999999999999999999999999975 899999 888888774 489999999
Q ss_pred HHHHHHHHHHHhcCCH
Q 004411 493 VDAVADAMDSALQMEN 508 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~ 508 (755)
++++|++|.++++.++
T Consensus 311 ~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 311 IDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHHHhCcc
Confidence 9999999999999874
No 72
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.80 E-value=8.4e-18 Score=180.85 Aligned_cols=273 Identities=18% Similarity=0.168 Sum_probs=191.3
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-----HHhhhCCEEEEeCHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYAR 259 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-----~~ll~~Dligf~t~~~~~ 259 (755)
+..+| |+|++|..+..++..++.+.....++.++.|...+... .. +....++ ..+-.+|.+.+.+....+
T Consensus 77 ~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 151 (359)
T cd03808 77 RKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SG--GLKRRLYLLLERLALRFTDKVIFQNEDDRD 151 (359)
T ss_pred HhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cc--hhHHHHHHHHHHHHHhhccEEEEcCHHHHH
Confidence 33455 89999988877777777665566778887776532211 00 0011111 123457899998888777
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccC
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFK 339 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~K 339 (755)
.+.+. +.. .....+.+.|+|+|.+.+...... ...++.+|+++||+.+.|
T Consensus 152 ~~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k 201 (359)
T cd03808 152 LALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDK 201 (359)
T ss_pred HHHHh-----cCC-------------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEecccccc
Confidence 76541 100 012356678999999877543110 124678999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 340 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
|+..+++|++.+.+++|+++ |+++|.... .+ ..... ++.+.+.. ..|.+++ . .+++..+
T Consensus 202 ~~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~~~~------~~v~~~g-~--~~~~~~~ 260 (359)
T cd03808 202 GIDELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKLGLE------GRVEFLG-F--RDDVPEL 260 (359)
T ss_pred CHHHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhcCCc------ceEEEee-c--cccHHHH
Confidence 99999999999988777765 887775321 11 11111 12222111 1366654 3 6789999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAV 496 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~ 496 (755)
|+.||++++||.+||||++++|||+||. |+|+|+.+|..+.+. .|+++++.|++++
T Consensus 261 ~~~adi~i~ps~~e~~~~~~~Ea~~~G~---------------------Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~ 319 (359)
T cd03808 261 LAAADVFVLPSYREGLPRVLLEAMAMGR---------------------PVIATDVPGCREAVIDGVNGFLVPPGDAEAL 319 (359)
T ss_pred HHhccEEEecCcccCcchHHHHHHHcCC---------------------CEEEecCCCchhhhhcCcceEEECCCCHHHH
Confidence 9999999999999999999999999975 899999999988884 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhH-hhhcCHHHHHHHHH
Q 004411 497 ADAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (755)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (755)
+++|.+++..+ +.+....++.+++ ...+++..+++.++
T Consensus 320 ~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 320 ADAIERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999988765 4555566677777 56788888888765
No 73
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.79 E-value=8.5e-18 Score=189.20 Aligned_cols=272 Identities=11% Similarity=0.063 Sum_probs=175.9
Q ss_pred CCEEEEeCCccc--h-HHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChH---HH---HH-Hh-hhCCEEEEeCHHHHH
Q 004411 191 EDYVWIHDYHLM--V-LPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---EI---LK-SL-LNSDLIGFHTFDYAR 259 (755)
Q Consensus 191 ~DiVwvhDyhl~--l-lp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~---~i---l~-~l-l~~Dligf~t~~~~~ 259 (755)
.|+|++|..... . ++.++++ ..++|+++.+|.-+++..-. ..+... .+ ++ .+ -.||.|...+....+
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~ 173 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKE 173 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHH
Confidence 499999985432 2 2333333 35789999999754321100 011000 11 11 11 236777666655433
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHH---------------Hc-
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKE---------------KF- 323 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~---------------~~- 323 (755)
.+.. .+ ....+|.++|+| +...|.+... . .....+.+ ..
T Consensus 174 ~l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (415)
T cd03816 174 DLQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL---E-EKHELFLKLAKTFLTRELRIGAVQLS 228 (415)
T ss_pred HHHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH---H-HHHHHHHhccccccccccccccceec
Confidence 3321 11 123577889999 5567765421 1 11111111 01
Q ss_pred -CCceEEEEeccccccCChHHHHHHHHHHHHh------CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc
Q 004411 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ------HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF 396 (755)
Q Consensus 324 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~ 396 (755)
++..+++++||+.+.||+..+++|++.+.+. +|+ +.|+++|. |+.. +++++++++.+.
T Consensus 229 ~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG~-----G~~~----~~l~~~~~~~~l-- 293 (415)
T cd03816 229 EERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITGK-----GPLK----EKYLERIKELKL-- 293 (415)
T ss_pred CCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEec-----CccH----HHHHHHHHHcCC--
Confidence 2356888999999999999999999998763 354 44888883 4433 344555544322
Q ss_pred CCCCCccEEEecCCCChhhHHHHHHhCcEEEEc---CCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe
Q 004411 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN---CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (755)
Q Consensus 397 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt---S~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (755)
..++++.+.++.+++..+|++||++|++ +..+||+++++||||||. |+|+|
T Consensus 294 -----~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~---------------------PVI~s 347 (415)
T cd03816 294 -----KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGL---------------------PVCAL 347 (415)
T ss_pred -----CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCC---------------------CEEEe
Confidence 2478888889999999999999999864 335889999999999975 89999
Q ss_pred CCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhhHhhhcCHHHHHHHHHH
Q 004411 474 EFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (755)
Q Consensus 474 e~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (755)
..+|+.+.+. +|++|+ |++++|++|.++++++ +++++.+.+..+++.+ .+|.+.+.+
T Consensus 348 ~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 348 DFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred CCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 9999888883 489994 9999999999999983 5566666666777664 445555443
No 74
>PHA01630 putative group 1 glycosyl transferase
Probab=99.79 E-value=6.3e-18 Score=184.11 Aligned_cols=211 Identities=16% Similarity=0.091 Sum_probs=151.7
Q ss_pred hCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC
Q 004411 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG 325 (755)
Q Consensus 246 ~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~ 325 (755)
.+|.|...+....+.+.. .|.. ...++.++|+|||++.|.+... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 488888888766655543 1110 0135778999999988864210 0134
Q ss_pred ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004411 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (755)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~ 405 (755)
+.++++++|+.+.||+..+|+|++++.+++|+++ |+++|. +.. +. + +. +-. .
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~-----~~~--~~--~---l~-------~~~---~-- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS-----NML--DP--R---LF-------GLN---G-- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC-----ccc--ch--h---hc-------ccc---c--
Confidence 5566677899999999999999999988877665 877772 111 11 1 10 100 1
Q ss_pred EecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--
Q 004411 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-- 483 (755)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 483 (755)
+.+.++.+++..+|+.||+||+||..||||++++||||||. |+|+|..+|.++.+.
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~---------------------PVIas~~gg~~E~i~~~ 251 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL---------------------DVVVTEKGAWSEWVLSN 251 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC---------------------CEEEeCCCCchhhccCC
Confidence 12467899999999999999999999999999999999975 899999988888773
Q ss_pred -CcEE--------------------eCCCCHHHHHHHHHHHhcCC-HHHHHHHHHH-HhhHhhhcCHHHHHHHHHHHHH
Q 004411 484 -GAIR--------------------VNPWNVDAVADAMDSALQME-NQEKILRHEK-HYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 484 -~ai~--------------------VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
+|++ ++| |.+++++++.++|..+ +++++.+++. ...+.+++++...++++++-++
T Consensus 252 ~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 252 LDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred CceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3444 455 7888999999999874 2344444444 4455678999999999988765
No 75
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.79 E-value=5.6e-18 Score=190.01 Aligned_cols=267 Identities=12% Similarity=0.070 Sum_probs=167.8
Q ss_pred HHHhCCCCCEEEEeCCccchH---HHHHHhhcCCCeEEEEEecCCCchhhhhcCC--ChHHHHHHhhhCCEEEEeCHHHH
Q 004411 184 MEVINPDEDYVWIHDYHLMVL---PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYA 258 (755)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp--~~~~il~~ll~~Dligf~t~~~~ 258 (755)
++..+| |+|++|+.-.+.. +..+++++ .. ++.++|+.|+ ++++... .....+...+ ..++
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~~ 176 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSWV 176 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHHH
Confidence 344566 8999998855544 44555554 44 7779999885 3332211 1111111111 1122
Q ss_pred HHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-C-C--ceEEEEecc
Q 004411 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-D-G--KIVILGVDD 334 (755)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~VdR 334 (755)
+.| .|+.++..+... .+ +.. .+.+.+.|||++.|.+.... +++.+ + + .+++++|||
T Consensus 177 ~r~--~~d~vi~pS~~~-~~-----l~~---~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGR 236 (462)
T PLN02846 177 VDI--YCHKVIRLSAAT-QD-----YPR---SIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGK 236 (462)
T ss_pred HHH--hcCEEEccCHHH-HH-----Hhh---CEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEec
Confidence 222 144444433211 11 001 12223579999988754211 11222 2 2 357999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChh
Q 004411 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (755)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~ 414 (755)
|.+.||+..+|+||.++.+..|+++ |+++| +|++.++++ +++.+++. .++++.+..+.
T Consensus 237 L~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~- 294 (462)
T PLN02846 237 MVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVK----AAAEKLEL--------DVRVYPGRDHA- 294 (462)
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHH----HHHHhcCC--------cEEEECCCCCH-
Confidence 9999999999999999988888765 88887 567655544 45544321 13446664433
Q ss_pred hHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCC
Q 004411 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPW 491 (755)
Q Consensus 415 el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~ 491 (755)
.++|+.+||||+||..||||+|.+||||||. |+|+++..| .+.+. +|+.+ .
T Consensus 295 --~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~---------------------PVVa~~~~~-~~~v~~~~ng~~~--~ 348 (462)
T PLN02846 295 --DPLFHDYKVFLNPSTTDVVCTTTAEALAMGK---------------------IVVCANHPS-NEFFKQFPNCRTY--D 348 (462)
T ss_pred --HHHHHhCCEEEECCCcccchHHHHHHHHcCC---------------------cEEEecCCC-cceeecCCceEec--C
Confidence 3699999999999999999999999999975 889988876 46662 46666 4
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 492 NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
|.++++++|.++|+.++++... .. ...++|..=+++|++.++
T Consensus 349 ~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 349 DGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred CHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 8999999999999865433211 11 236777777777776554
No 76
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.78 E-value=2.8e-17 Score=183.84 Aligned_cols=264 Identities=14% Similarity=0.107 Sum_probs=172.9
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhc------CCChH------HHH----H-HhhhCCEEEEe
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT------LPVRD------EIL----K-SLLNSDLIGFH 253 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~------lp~~~------~il----~-~ll~~Dligf~ 253 (755)
.|+|++|...+. .++..+..+++..+..|.-. ++.|.. .|.+. ..+ + .+-.+|.|.+.
T Consensus 105 ~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~~ 179 (397)
T TIGR03087 105 VDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAATFV 179 (397)
T ss_pred CCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEEEc
Confidence 499999854332 33433334567777777421 111111 11110 000 1 12356777777
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEe
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGV 332 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~V 332 (755)
+....+.+... . .....++.++|+|||++.|.+..... ..+ .++++|+++
T Consensus 180 S~~~~~~l~~~----~---------------~~~~~~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~ 230 (397)
T TIGR03087 180 SRAEAELFRRL----A---------------PEAAGRITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFT 230 (397)
T ss_pred CHHHHHHHHHh----C---------------CCCCCCeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEE
Confidence 77665554321 0 11123677899999999886532110 112 356789999
Q ss_pred ccccccCChHHHH----HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEec
Q 004411 333 DDMDLFKGISLKF----LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408 (755)
Q Consensus 333 dRld~~KGi~~~l----~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~ 408 (755)
||+++.||+..++ .++..+.+++|+++ |+++|. +++ .+++++. .. ..|++.
T Consensus 231 G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~----~~------~~V~~~- 285 (397)
T TIGR03087 231 GAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALA----AL------PGVTVT- 285 (397)
T ss_pred EecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhc----cC------CCeEEe-
Confidence 9999999999887 56667777888876 888873 222 1233332 11 136654
Q ss_pred CCCChhhHHHHHHhCcEEEEcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc--CCc
Q 004411 409 EPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--SGA 485 (755)
Q Consensus 409 ~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~a 485 (755)
|.++ ++..+|+.||++|+||. .||++++++||||||. |+|+|..++..... ..|
T Consensus 286 G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~---------------------PVV~t~~~~~~i~~~~~~g 342 (397)
T TIGR03087 286 GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAK---------------------PVVASPEAAEGIDALPGAE 342 (397)
T ss_pred eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCC---------------------CEEecCcccccccccCCcc
Confidence 5665 78999999999999997 5999999999999975 88888864322111 247
Q ss_pred EEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHH
Q 004411 486 IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDL 538 (755)
Q Consensus 486 i~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 538 (755)
+++. .|++++|++|.++++++ +.++.+.++.++++. .+++...++++.+-+
T Consensus 343 ~lv~-~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 343 LLVA-ADPADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred eEeC-CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 8886 89999999999999864 466677778898885 689999888876654
No 77
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.77 E-value=4.4e-17 Score=177.53 Aligned_cols=260 Identities=16% Similarity=0.185 Sum_probs=176.3
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-HHhhhCCEEEEeCHHHHHHHHHHHhhHh
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-KSLLNSDLIGFHTFDYARHFLSSCSRML 269 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-~~ll~~Dligf~t~~~~~~Fl~~~~r~l 269 (755)
.|+|++|+...+.....+... .+.+..+++|........+. .....+. ..+..+|.|...+..+.+.+.. +
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~-----~ 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV-----L 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-----h
Confidence 389999986644322222222 46788888996432211110 1111122 2456788888877766654432 0
Q ss_pred CccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHH
Q 004411 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349 (755)
Q Consensus 270 g~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 349 (755)
+ ....++.++|+|+|...+.+... . .........++.+|+++||+.+.||+..+++|++
T Consensus 156 ~---------------~~~~~~~~i~~gi~~~~~~~~~~---~---~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 156 R---------------RFRDKVRVIPLGLDPARYPRPDA---L---EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred c---------------CCccceEEecCCCChhhcCCcch---h---hhHhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 1 01146788999999988764311 0 0111111246789999999999999999999998
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEc
Q 004411 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (755)
Q Consensus 350 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 429 (755)
++. ++.|+++|. ++.. .++.+++.+.+.. ..|++ .+.++.+++..+|+.||++++|
T Consensus 215 ~l~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~V~~-~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 215 ALP--------DAPLVIVGE-----GPLE----AELEALAAALGLL------DRVRF-LGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred hcc--------CcEEEEEeC-----ChhH----HHHHHHHHhcCCc------ceEEE-cCCCCHHHHHHHHHhCCEEEeC
Confidence 873 355887873 3332 2344444333211 13665 5799999999999999999999
Q ss_pred CC--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC----CcEEeCCCCHHHHHHHHHHH
Q 004411 430 CV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS----GAIRVNPWNVDAVADAMDSA 503 (755)
Q Consensus 430 S~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~ai~VnP~d~~~~A~ai~~a 503 (755)
|. .||+|++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~---------------------Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l 329 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGK---------------------PVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRL 329 (357)
T ss_pred CcccccccchHHHHHHHcCC---------------------CEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHH
Confidence 96 5999999999999975 899999998887662 48999999999999999999
Q ss_pred hcCCHHHHHHHHHHHhhHhhhc
Q 004411 504 LQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 504 L~m~~~er~~r~~~~~~~v~~~ 525 (755)
++++ ++++.+.++.++++.++
T Consensus 330 ~~~~-~~~~~~~~~~~~~~~~~ 350 (357)
T cd03795 330 LEDP-ELRERLGEAARERAEEE 350 (357)
T ss_pred HHCH-HHHHHHHHHHHHHHHHh
Confidence 9965 46666677778877653
No 78
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.76 E-value=7.7e-17 Score=174.34 Aligned_cols=240 Identities=14% Similarity=0.041 Sum_probs=162.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
-|+|++|+....++ + .+..+.++.+++|..++... ..........+.+.+-+....+.+.
T Consensus 88 ~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~-------- 147 (335)
T cd03802 88 FDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPEL--------LKLYYAARPDVPFVSISDAQRRPWP-------- 147 (335)
T ss_pred CCEEEecCcccchh---h-hcccCCCEEEEecCCCCccc--------chHHHhhCcCCeEEEecHHHHhhcc--------
Confidence 49999999887766 2 23457889999998764211 0122333444444433332221110
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
.. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+++
T Consensus 148 ---------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 195 (335)
T cd03802 148 ---------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR 195 (335)
T ss_pred ---------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh
Confidence 00 467789999999988641 1245689999999999999999998754
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+++ .|+++|.. ++...+...+.+... ++ ..|.++ |.++.+++..+|+.||++++||
T Consensus 196 -----~~~----~l~i~G~~-----~~~~~~~~~~~~~~~-~~--------~~v~~~-G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 196 -----AGI----PLKLAGPV-----SDPDYFYREIAPELL-DG--------PDIEYL-GEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred -----cCC----eEEEEeCC-----CCHHHHHHHHHHhcc-cC--------CcEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 344 48878743 221222222222210 11 136655 6899999999999999999999
Q ss_pred C-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcC
Q 004411 431 V-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 431 ~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m 506 (755)
. .||||++++||||||. |+|+|+.+|..+.+. +|+++++ +++++++|.+++.+
T Consensus 252 ~~~E~~~~~~lEAma~G~---------------------PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~ 308 (335)
T cd03802 252 LWEEPFGLVMIEAMACGT---------------------PVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRL 308 (335)
T ss_pred cccCCcchHHHHHHhcCC---------------------CEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhcc
Confidence 7 5999999999999975 899999999998884 4899987 99999999998765
Q ss_pred CHHHHHHHHHHHhhHh-hhcCHHHHHHHHHH
Q 004411 507 ENQEKILRHEKHYKYI-SSHDVAYWAKSIDQ 536 (755)
Q Consensus 507 ~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 536 (755)
+.+ ..++++ .++++..-++++++
T Consensus 309 ~~~-------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 309 DRA-------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHH-------HHHHHHHHhCCHHHHHHHHHH
Confidence 431 223333 45676666666654
No 79
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.75 E-value=1.2e-16 Score=175.07 Aligned_cols=196 Identities=17% Similarity=0.202 Sum_probs=143.4
Q ss_pred hhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc
Q 004411 244 LLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF 323 (755)
Q Consensus 244 ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~ 323 (755)
+..+|.|...+....+.+... .+ . ...++|+|+|.+.|.+..
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~---------------- 192 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE---------------- 192 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------
Confidence 456788877777665555321 11 1 235689999998875421
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
..+++++++||+.+.||+..+++|++++ | ++ |+++|. +++.+++++ .. . ..
T Consensus 193 ~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~----~----~~ 243 (351)
T cd03804 193 EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA----G----PN 243 (351)
T ss_pred CCCCEEEEEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc----C----CC
Confidence 2345799999999999999999999865 3 43 777873 343333322 11 1 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
|.|+ |.++.+++.++|+.||++++||. ||||++++|||+||. |+|+|..+|..+.+.
T Consensus 244 V~~~-g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~---------------------Pvi~~~~~~~~e~i~ 300 (351)
T cd03804 244 VTFL-GRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT---------------------PVIAYGKGGALETVI 300 (351)
T ss_pred EEEe-cCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC---------------------CEEEeCCCCCcceee
Confidence 7755 68999999999999999999999 999999999999975 899999999888773
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHH
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (755)
.|++++|.|++++|++|..++++++. ..+.+++.+.++++.+..++
T Consensus 301 ~~~~G~~~~~~~~~~la~~i~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 301 DGVTGILFEEQTVESLAAAVERFEKNEDF----DPQAIRAHAERFSESRFREK 349 (351)
T ss_pred CCCCEEEeCCCCHHHHHHHHHHHHhCccc----CHHHHHHHHHhcCHHHHHHH
Confidence 49999999999999999999998741 12334445555665555543
No 80
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=1.6e-16 Score=173.76 Aligned_cols=265 Identities=13% Similarity=0.013 Sum_probs=173.9
Q ss_pred CEEEEeCCccc--hHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-----HHhhhCCEEEEeCHHHHHHHHHH
Q 004411 192 DYVWIHDYHLM--VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 192 DiVwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-----~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
|+++||..... .+..++++. +.++.+.+|..-.....+.. ....++ ..+..+|.|...+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~--~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLK--GKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhc--CCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 55666654433 333334332 67888888853111111110 111121 1245678888877655444321
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEeccccccCChH
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGIS 342 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~ 342 (755)
..+ .. . .++|+|+|...+.+. ...++++ .+++.++++||+.+.||+.
T Consensus 161 ---~~~---------------~~-~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---KYG---------------RD-S--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---hcC---------------CC-C--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 111 11 1 679999998766430 1122222 4556788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004411 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (755)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (755)
.+++|+.++.. ++.|+++|... ...++.+.+.+ +. +.. ..|++ .|.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~---~~----~~~--~~V~~-~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE---KA----AAD--PRIIF-VGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH---Hh----CCC--CcEEE-ccccChHHHHHHHHh
Confidence 99999987632 34588888532 11223333332 11 111 13665 578999999999999
Q ss_pred CcEEEEcCCC-cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHH
Q 004411 423 AECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAM 500 (755)
Q Consensus 423 ADv~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai 500 (755)
||++++||.. |||+++++|||+||. |+|+|..+|..+.+. +|..++|.|. +|++|
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G~---------------------PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i 324 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYGC---------------------PVLASDNPFNREVLGDKAIYFKVGDD--LASLL 324 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcCC---------------------CEEEecCCccceeecCCeeEecCchH--HHHHH
Confidence 9999999999 999999999999975 899999998888774 6888988776 99999
Q ss_pred HHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHHH
Q 004411 501 DSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDL 538 (755)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l 538 (755)
.++++++ +.+....++.++++.+ +++..-++++++.+
T Consensus 325 ~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 325 EELEADP-EEVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999976 3455556667777764 78888777776543
No 81
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.74 E-value=1.8e-16 Score=169.79 Aligned_cols=243 Identities=20% Similarity=0.174 Sum_probs=165.9
Q ss_pred CEEEEeCC-ccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 192 DYVWIHDY-HLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 192 DiVwvhDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
|+|++|+. ...++..+. .+. +.++.+..|..++..... ..+........+..+|.+.+.+....+.+.... +
T Consensus 83 dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~ 155 (353)
T cd03811 83 DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL----G 155 (353)
T ss_pred CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHhh----c
Confidence 99999988 444444444 333 789999999887542211 111111223345678888888776665554311 1
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
....++.++|+|+|...+.+.... . ..+ ....++.+++++||+++.||+..+++|+++
T Consensus 156 ---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~-~~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~ 213 (353)
T cd03811 156 ---------------IPPDKIEVIYNPIDIEEIRALAEE-----P-LEL-GIPPDGPVILAVGRLSPQKGFDTLIRAFAL 213 (353)
T ss_pred ---------------CCccccEEecCCcChhhcCcccch-----h-hhc-CCCCCceEEEEEecchhhcChHHHHHHHHH
Confidence 113467889999999887653211 0 000 112567899999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+++|+++ |+++|. ++...+ +.+++.+.+.. . .|.+. +. .+++..+|+.||+++.||
T Consensus 214 l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~----~--~v~~~-g~--~~~~~~~~~~~d~~i~ps 271 (353)
T cd03811 214 LRKEGPDAR----LVILGD-----GPLREE----LEALAKELGLA----D--RVHFL-GF--QSNPYPYLKAADLFVLSS 271 (353)
T ss_pred hhhcCCCce----EEEEcC-----CccHHH----HHHHHHhcCCC----c--cEEEe-cc--cCCHHHHHHhCCEEEeCc
Confidence 988777665 887773 233223 33444444321 1 25554 44 457899999999999999
Q ss_pred CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHH---HHHHHh
Q 004411 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD---AMDSAL 504 (755)
Q Consensus 431 ~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~---ai~~aL 504 (755)
..||||++++|||+||. |+|+|+.+|..+.+. +|+++++.|.+++++ +|...+
T Consensus 272 ~~e~~~~~~~Ea~~~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 330 (353)
T cd03811 272 RYEGFPNVLLEAMALGT---------------------PVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLL 330 (353)
T ss_pred ccCCCCcHHHHHHHhCC---------------------CEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhcc
Confidence 99999999999999975 899999999888873 489999999999954 444444
Q ss_pred cC
Q 004411 505 QM 506 (755)
Q Consensus 505 ~m 506 (755)
..
T Consensus 331 ~~ 332 (353)
T cd03811 331 LD 332 (353)
T ss_pred CC
Confidence 43
No 82
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.74 E-value=2.2e-16 Score=172.56 Aligned_cols=194 Identities=17% Similarity=0.189 Sum_probs=144.2
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc--cCChHHHHHHHHHHHHh-CCCCCCcE
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL--FKGISLKFLAMGQLLEQ-HPDLRGKV 362 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~--~KGi~~~l~A~~~ll~~-~P~~~~~v 362 (755)
.++.++|+|||.+.|.+... ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 46788999999988854311 1233333 35566666666654 99999999999988665 344 4
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC-hhhHHHHHHhCcEEEEcCCCcCCCcccee
Q 004411 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS-TQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vvtS~~EG~nLv~~E 441 (755)
.++++|.. +.... . .+ . ..|.++ +.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~-----~~~~~------~---~~----~----~~v~~~-g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGAS-----DPEIP------P---DL----P----FPVHYL-GSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCC-----chhhh------c---cC----C----CceEec-CCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 47777742 11100 0 11 1 135544 5777 88999999999999999999999999999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKH 518 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 518 (755)
||+||. |+|+|..+|..+.+. .|+++++.|++++|++|.+++..+ +++..+.++.
T Consensus 284 am~~g~---------------------PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~ 341 (365)
T cd03825 284 ALACGT---------------------PVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAA 341 (365)
T ss_pred HHhcCC---------------------CEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHH
Confidence 999975 899999988888873 489999999999999999999865 3556666677
Q ss_pred hhHhh-hcCHHHHHHHHHHHHH
Q 004411 519 YKYIS-SHDVAYWAKSIDQDLE 539 (755)
Q Consensus 519 ~~~v~-~~~~~~W~~~~l~~l~ 539 (755)
++++. .+++...++.+++-++
T Consensus 342 ~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 342 RELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHh
Confidence 77775 5889999888887654
No 83
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.6e-15 Score=170.48 Aligned_cols=297 Identities=20% Similarity=0.167 Sum_probs=201.5
Q ss_pred CCEEEEeCCccchHHHHHHhh---cCCCeEEEEEecC-----CC-chhhhhcCCCh------------HHHH-HHhhhCC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKR---FHRVKVGFFLHSP-----FP-SSEIYRTLPVR------------DEIL-KSLLNSD 248 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~~r~lp~~------------~~il-~~ll~~D 248 (755)
.|||++||||+.|+|.++++. ...++.+|+.|.- |+ .......||.- -..+ -++..||
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 399999999999999999997 6789999999953 33 11112234410 0223 3467778
Q ss_pred EEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC-----------chhHHHHH
Q 004411 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKVK 317 (755)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~~ 317 (755)
.|.--++.|++.... ...| .|..++ ..-+..++.-|=+|||.+.+.+.... +...+...
T Consensus 211 ~vttVSptYa~Ei~t---~~~g------~gl~g~-l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYT---PEYG------EGLEGL-LSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhcc---cccc------ccchhh-hhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 888888888766541 1111 000000 01112455556678888776553210 01112223
Q ss_pred HHHHHc--C---CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 004411 318 ELKEKF--D---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (755)
Q Consensus 318 ~lr~~~--~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~I 392 (755)
.|++++ + +.+++..|+|++..||++.+++|+..++++. ++ ||++|.+ + ..++..+..++.++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g------d-~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG------D-PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC------c-HHHHHHHHHHHHhc
Confidence 466666 2 5689999999999999999999999999987 55 7778742 1 36778888998887
Q ss_pred hcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE
Q 004411 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (755)
Q Consensus 393 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (755)
..+.. +.-..+..-...+|+.||++++||..||+||+-+++|.-|+ ++|+
T Consensus 348 ~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGt---------------------vpIv 397 (487)
T COG0297 348 PGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGT---------------------LPIV 397 (487)
T ss_pred CceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCC---------------------cceE
Confidence 65321 22234566677899999999999999999999999999864 8899
Q ss_pred eCCCCcccccC-----------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh--hhcCHHHHHHHHHHHHH
Q 004411 473 SEFIGCSPSLS-----------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI--SSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 473 Se~~G~~~~l~-----------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~~l~~l~ 539 (755)
++.+|.++.+. .|+++.|.|.++++.||.+|+..-..... .+++..... ..+++..=+++|..--+
T Consensus 398 ~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~ 476 (487)
T COG0297 398 RETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYK 476 (487)
T ss_pred cccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHH
Confidence 99999988773 27899888999999999999875432111 022222222 35677777777776555
Q ss_pred HH
Q 004411 540 RA 541 (755)
Q Consensus 540 ~~ 541 (755)
..
T Consensus 477 ~~ 478 (487)
T COG0297 477 PL 478 (487)
T ss_pred HH
Confidence 44
No 84
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.71 E-value=1.5e-15 Score=171.58 Aligned_cols=286 Identities=15% Similarity=0.169 Sum_probs=177.7
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHh-hcCCCeEEEEEecCCC-chhhhhcCCChHHHHHHhh-hCCEEEEeCHHH
Q 004411 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRK-RFHRVKVGFFLHSPFP-SSEIYRTLPVRDEILKSLL-NSDLIGFHTFDY 257 (755)
Q Consensus 181 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~~r~lp~~~~il~~ll-~~Dligf~t~~~ 257 (755)
.++++..+| |+|++|.+.++ |.++.. +..++++.++.|.-.+ +...++.+ ..+.+.++ .+|.|..++...
T Consensus 117 ~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 117 RRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred HHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHH
Confidence 345566677 89999977754 444332 2235777766554322 12222211 22333333 479999999988
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEecccc
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMD 336 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld 336 (755)
.+.|.+ +|+. .. |.++|++ +.+.+... ........+++++ +++++++++++.
T Consensus 190 ~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~- 242 (425)
T PRK05749 190 AERFLA-----LGAK---------------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH- 242 (425)
T ss_pred HHHHHH-----cCCC---------------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC-
Confidence 877764 2321 12 4455653 33332211 1112234566777 678889999875
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC-CCCC-----ccEEEecCC
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG-KPGY-----EPIVIIKEP 410 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g-~~~~-----~pV~~~~~~ 410 (755)
.|+...+++||.++++++|+++ |+++| ++++. .+++.+++++.+..+. ..++ ...+++.+
T Consensus 243 -~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~- 308 (425)
T PRK05749 243 -EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD- 308 (425)
T ss_pred -chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe-
Confidence 5889999999999988899876 77766 34442 1234444444322110 0000 01222322
Q ss_pred CChhhHHHHHHhCcEEEE-cCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc-cc---cc-CC
Q 004411 411 LSTQDKVPYYAIAECCVV-NCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC-SP---SL-SG 484 (755)
Q Consensus 411 v~~~el~aly~~ADv~vv-tS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-~~---~l-~~ 484 (755)
+..|+..+|+.||++++ +|..||+|++++|||+||. |+|++...|. .+ .+ .+
T Consensus 309 -~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~---------------------PVI~g~~~~~~~e~~~~~~~~ 366 (425)
T PRK05749 309 -TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV---------------------PVISGPHTFNFKEIFERLLQA 366 (425)
T ss_pred -cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC---------------------CEEECCCccCHHHHHHHHHHC
Confidence 36799999999999666 6888999999999999974 7888765443 22 22 35
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
|.++.|.|++++|++|.++++++ +.+..+.++.++++.++ ..=.++.++.+.
T Consensus 367 g~~~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~ 418 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQN--QGALQRTLQLLE 418 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhC--ccHHHHHHHHHH
Confidence 78888999999999999999854 56777778889998776 233344444444
No 85
>PLN02275 transferase, transferring glycosyl groups
Probab=99.71 E-value=4.5e-16 Score=172.66 Aligned_cols=236 Identities=10% Similarity=-0.021 Sum_probs=155.5
Q ss_pred CEEEEeCCccch--HHHHHHhhcCCCeEEEEEecCCCchhhhhc-C---CC----hHHHHHHh-hhCCEEEEeCHHHHHH
Q 004411 192 DYVWIHDYHLMV--LPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-L---PV----RDEILKSL-LNSDLIGFHTFDYARH 260 (755)
Q Consensus 192 DiVwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~r~-l---p~----~~~il~~l-l~~Dligf~t~~~~~~ 260 (755)
|+|++|..+.+. ++..+-.+..++|+.+++|..+.+ .+.. . +. ...+.+.+ -.+|.|...+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999877532 233333333468899899975421 1100 0 10 01111222 3467777777665544
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (755)
..+. . |.. +.++|+|+ .+.|.+.... ..++ .+.+.+++++||+.+.||
T Consensus 180 l~~~----~----------------g~~--i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~ 227 (371)
T PLN02275 180 LDQN----W----------------GIR--ATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDED 227 (371)
T ss_pred HHHh----c----------------CCC--eEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCC
Confidence 4320 0 111 57788884 5667543110 1111 134567889999999999
Q ss_pred hHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 341 ISLKFLAMGQLLE-----------------QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 341 i~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
+..+++|+..+.. ++|+ +.|+++| +|++.+++ ++++++.+. ..
T Consensus 228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l----~~~~~~~~l-------~~ 287 (371)
T PLN02275 228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMY----EEKISRLNL-------RH 287 (371)
T ss_pred HHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHH----HHHHHHcCC-------Cc
Confidence 9999999988742 3455 4588888 45554444 444444322 24
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcC---CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNC---VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS---~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (755)
|+++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||||. |+|+|..+|..+
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~---------------------PVVa~~~gg~~e 346 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL---------------------PVCAVSYSCIGE 346 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC---------------------CEEEecCCChHH
Confidence 787777889999999999999999753 24899999999999975 899999989888
Q ss_pred ccC---CcEEeCCCCHHHHHHHHHHHh
Q 004411 481 SLS---GAIRVNPWNVDAVADAMDSAL 504 (755)
Q Consensus 481 ~l~---~ai~VnP~d~~~~A~ai~~aL 504 (755)
.+. +|++|+ |++++|++|.++|
T Consensus 347 iv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 347 LVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 883 489996 6999999998765
No 86
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.67 E-value=2.8e-16 Score=159.40 Aligned_cols=158 Identities=24% Similarity=0.312 Sum_probs=116.9
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeE
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~ 666 (755)
||++|+||||++. ....++++++++|++|+++ +..++++|||+...+.+++..+ +.++|++||++++.+++..|..
T Consensus 1 li~~D~DgTL~~~--~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~~ 76 (204)
T TIGR01484 1 LLFFDLDGTLLDP--NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYIE 76 (204)
T ss_pred CEEEeCcCCCcCC--CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEEc
Confidence 6899999999983 2267899999999999985 6899999999999999999875 4789999999999865444543
Q ss_pred cccCcCccHHH------HHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhc-CCCeEEE-e
Q 004411 667 CSLTRDFDWKE------IAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA-NEPVVVK-R 738 (755)
Q Consensus 667 ~~~~~~~~w~~------~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~-~~~~~V~-s 738 (755)
....|.+ .+..++..+....++..+|.+...+.+||+.. +.......++...++.... ...+.+. +
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 150 (204)
T TIGR01484 77 ----PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYV 150 (204)
T ss_pred ----ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEe
Confidence 1122322 22344444556778889999999999999875 1111233455555554422 1357777 7
Q ss_pred cCeEEEEEeCCCCCCC
Q 004411 739 GQHIVEVKPQVCQHQS 754 (755)
Q Consensus 739 G~~~VEV~p~gvnKG~ 754 (755)
|..++||+|+++|||.
T Consensus 151 ~~~~~ev~p~~~~K~~ 166 (204)
T TIGR01484 151 GKTDLEVLPAGVDKGS 166 (204)
T ss_pred cCCEEEEecCCCChHH
Confidence 9999999999999985
No 87
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.64 E-value=1.3e-15 Score=149.54 Aligned_cols=155 Identities=21% Similarity=0.326 Sum_probs=119.1
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ-HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
.++++|+++||+++.||+..+++|+..+.++ .|++. |+++|. ++. ...+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~----~~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEY----KKELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCH----HHHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----ccc----cccccccccccccc------c
Confidence 5789999999999999999999999999875 66654 877762 222 23344444443321 1
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
.|.+++ .++.+++.++|+.||+++.||..||+|++++|||+||. |+|+|..+|..+.+
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~---------------------pvI~~~~~~~~e~~ 131 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC---------------------PVIASDIGGNNEII 131 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT----------------------EEEEESSTHHHHHS
T ss_pred cccccc-cccccccccccccceecccccccccccccccccccccc---------------------ceeeccccCCceee
Confidence 377664 66789999999999999999999999999999999964 89999988888877
Q ss_pred C---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 004411 483 S---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYK 520 (755)
Q Consensus 483 ~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 520 (755)
. .|++++|.|+++++++|.+++.++ +.+....++.++
T Consensus 132 ~~~~~g~~~~~~~~~~l~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 132 NDGVNGFLFDPNDIEELADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp GTTTSEEEESTTSHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred ccccceEEeCCCCHHHHHHHHHHHHCCH-HHHHHHHHHhcC
Confidence 3 479999999999999999999976 344444444443
No 88
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.55 E-value=2.3e-14 Score=149.82 Aligned_cols=221 Identities=18% Similarity=0.237 Sum_probs=161.0
Q ss_pred CCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEE
Q 004411 213 HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIK 292 (755)
Q Consensus 213 ~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~ 292 (755)
.+.++.|+-|.-|--.++- +.+-..++-|. |...+|.+++++.++.+.. +.-.-...+|.
T Consensus 113 MGlktVfTdHSlfGfad~~-----------si~~n~ll~~s--------L~~id~~IcVshtskentv-lr~~L~p~kvs 172 (426)
T KOG1111|consen 113 MGLKTVFTDHSLFGFADIG-----------SILTNKLLPLS--------LANIDRIICVSHTSKENTV-LRGALAPAKVS 172 (426)
T ss_pred cCceEEEeccccccccchh-----------hhhhcceeeee--------ecCCCcEEEEeecCCCceE-EEeccCHhHee
Confidence 4589999999865322111 11111222221 3345677788888876532 22222345889
Q ss_pred EEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 004411 293 ILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (755)
Q Consensus 293 v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 371 (755)
++||-+++..|.|.... +. .+...|+.++||-+.||+++++.++.++-++||+.+ ++++|
T Consensus 173 vIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fii~G--- 233 (426)
T KOG1111|consen 173 VIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FIIIG--- 233 (426)
T ss_pred eccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EEEec---
Confidence 99999999999885321 22 345889999999999999999999999999999987 88777
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCc
Q 004411 372 RSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (755)
Q Consensus 372 r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 451 (755)
+||..-.+++.+++. +. + .+|+++ |.++.+++...|...|||+.||+.|.|+++.+||+.||.
T Consensus 234 --DGPk~i~lee~lEk~----~l--~----~rV~~l-G~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL---- 296 (426)
T KOG1111|consen 234 --DGPKRIDLEEMLEKL----FL--Q----DRVVML-GTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGL---- 296 (426)
T ss_pred --CCcccchHHHHHHHh----hc--c----CceEEe-cccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCC----
Confidence 566544444333333 21 1 257765 689999999999999999999999999999999999975
Q ss_pred cccccCCCCCCCCCCCceEEEeCCCCcccccCCc-EEeCCCCHHHHHHHHHHHhcC
Q 004411 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGA-IRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-i~VnP~d~~~~A~ai~~aL~m 506 (755)
++|.+..+|..+.|... +..-+-.++++++++.+|++.
T Consensus 297 -----------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 297 -----------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred -----------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 78888889999888644 435555788888888888764
No 89
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.53 E-value=5.8e-13 Score=147.88 Aligned_cols=266 Identities=12% Similarity=0.091 Sum_probs=164.6
Q ss_pred CCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHH-HHHhhhCCEEEEeCHHHHHHHHHHHh
Q 004411 188 NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSSCS 266 (755)
Q Consensus 188 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~i-l~~ll~~Dligf~t~~~~~~Fl~~~~ 266 (755)
+.++.++|.+..-...+... .+..++++-+|--|+..... -+....+ -+.+-.||+|...+....+.+..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~--- 170 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR--- 170 (373)
T ss_pred CCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh---
Confidence 44457888875544444333 45567777666444321110 0111011 22345688888777765543221
Q ss_pred hHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHH
Q 004411 267 RMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346 (755)
Q Consensus 267 r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 346 (755)
+ + .++.++|+|+|.+.|.+....+ .. .+.+ ...++++|+++|++...+++. +|.
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~-~~--~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~ 224 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPP-PP--PADL--AALPRPVIGYYGAIAEWLDLE-LLE 224 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccC-CC--hhHH--hcCCCCEEEEEeccccccCHH-HHH
Confidence 1 1 3567899999999997542211 10 1111 124678999999999966654 444
Q ss_pred HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEE
Q 004411 347 AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECC 426 (755)
Q Consensus 347 A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 426 (755)
+ +.+.+|+++ |++||... ...+ ...+ .. ...|+++ |.++.+++.++|+.||++
T Consensus 225 ~---la~~~p~~~----~vliG~~~-----~~~~----~~~~----~~------~~nV~~~-G~~~~~~l~~~l~~~Dv~ 277 (373)
T cd04950 225 A---LAKARPDWS----FVLIGPVD-----VSID----PSAL----LR------LPNVHYL-GPKPYKELPAYLAGFDVA 277 (373)
T ss_pred H---HHHHCCCCE----EEEECCCc-----CccC----hhHh----cc------CCCEEEe-CCCCHHHHHHHHHhCCEE
Confidence 3 345688876 88888421 1001 0111 00 1247765 689999999999999999
Q ss_pred EEcCCC-----cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHH
Q 004411 427 VVNCVR-----DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMD 501 (755)
Q Consensus 427 vvtS~~-----EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~ 501 (755)
++|+.. .++++..+||||||. |+|+|.+.++.+.. ++..+.+.|+++++++|.
T Consensus 278 l~P~~~~~~~~~~~P~Kl~EylA~G~---------------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~ 335 (373)
T cd04950 278 ILPFRLNELTRATSPLKLFEYLAAGK---------------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIE 335 (373)
T ss_pred ecCCccchhhhcCCcchHHHHhccCC---------------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHH
Confidence 999863 577899999999975 78888765544332 344455669999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (755)
++|..+..++..+ ..+.+.+|+|..=++.+++.|..
T Consensus 336 ~~l~~~~~~~~~~---~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 336 KALLEDGPARERR---RLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHhcCCchHHHH---HHHHHHHCCHHHHHHHHHHHHHh
Confidence 9887654343332 22268889999888888866543
No 90
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.47 E-value=5.8e-13 Score=140.73 Aligned_cols=161 Identities=16% Similarity=0.171 Sum_probs=103.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS 662 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~ 662 (755)
..|+|++|+||||++ .+..++++++++|+++.+ ++..|+|+|||++..+.+.+..+. +..+|++||+++.+.++.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 479999999999999 456699999999999986 599999999999999999998773 236999999999988322
Q ss_pred ceeEcccCcCccHHHHHHHHHHHHhcC--CCCcEEeecceEEEE-----------------EeccCC--CC-------cc
Q 004411 663 AWEICSLTRDFDWKEIAEPVMKLYTET--TDGSFIEDKETAIVW-----------------HHQHAD--PH-------FG 714 (755)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~i~~~y~~~--t~gs~iE~k~~~l~~-----------------hyr~ad--~~-------~~ 714 (755)
.... ..+ ++.+..+++..... ....+.......... .....+ .+ ..
T Consensus 78 i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQK---PLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred Eeee---cCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 2222 222 45566666544221 111111111000000 000000 00 01
Q ss_pred hhhHHHHHHHHHHHhcCCCeEEEecCeE-EEEEeCCCCCCC
Q 004411 715 SCQAKELLDHLENVLANEPVVVKRGQHI-VEVKPQVCQHQS 754 (755)
Q Consensus 715 ~~qa~el~~~L~~~l~~~~~~V~sG~~~-VEV~p~gvnKG~ 754 (755)
.....++...+.+.+.+..+.+.++..+ +||.|+|+|||+
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~ 192 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGY 192 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHH
Confidence 2233455566666666555667766555 999999999984
No 91
>PTZ00174 phosphomannomutase; Provisional
Probab=99.47 E-value=9.4e-13 Score=137.85 Aligned_cols=168 Identities=15% Similarity=0.138 Sum_probs=100.4
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CCc-eEEcCCceEEEec
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKL-GLSAEHGYFTRWS 659 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~l-~liaenGa~i~~~ 659 (755)
.+.|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||++..+.+.++.. ..+ ++|+.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 3579999999999998 567789999999999997 59999999999999999988632 222 5799999999864
Q ss_pred CCCceeEccc-CcCccHHHHHHHHHHHH-----hcCCCCcEEeecceEEEEEeccCCC------C---cc--hhhHHHHH
Q 004411 660 KNSAWEICSL-TRDFDWKEIAEPVMKLY-----TETTDGSFIEDKETAIVWHHQHADP------H---FG--SCQAKELL 722 (755)
Q Consensus 660 ~~~~w~~~~~-~~~~~w~~~v~~i~~~y-----~~~t~gs~iE~k~~~l~~hyr~ad~------~---~~--~~qa~el~ 722 (755)
++..+..... ..+.++...+....+.+ .....+.|++.........+..... + +. .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 3222222111 12222222222222221 1123345554332111111100000 0 00 11223566
Q ss_pred HHHHHHhcCCCeEEEe-cCeEEEEEeCCCCCCC
Q 004411 723 DHLENVLANEPVVVKR-GQHIVEVKPQVCQHQS 754 (755)
Q Consensus 723 ~~L~~~l~~~~~~V~s-G~~~VEV~p~gvnKG~ 754 (755)
+.+.+.+.+..+...+ |..++||.|+|+|||+
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~ 191 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTY 191 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHH
Confidence 6666665443344443 5689999999999984
No 92
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.46 E-value=1.2e-11 Score=137.71 Aligned_cols=191 Identities=14% Similarity=0.130 Sum_probs=125.7
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCChHHHHHHHHHHHHh----CCCCCCc
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ----HPDLRGK 361 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~----~P~~~~~ 361 (755)
.+|.+++++|+.+.+.+. . ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 173 ~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~-- 243 (382)
T PLN02605 173 SQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ-- 243 (382)
T ss_pred HHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce--
Confidence 356667888886543321 1 123466666 4688999999999999999999999876521 34332
Q ss_pred EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCcccee
Q 004411 362 VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 362 vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~E 441 (755)
++.+++ +++ ++++++.+... + ..|.++ |++ +++..+|++||++|.+| .++++.|
T Consensus 244 --~~vi~G----~~~---~~~~~L~~~~~------~----~~v~~~-G~~--~~~~~l~~aaDv~V~~~----g~~ti~E 297 (382)
T PLN02605 244 --VVVICG----RNK---KLQSKLESRDW------K----IPVKVR-GFV--TNMEEWMGACDCIITKA----GPGTIAE 297 (382)
T ss_pred --EEEEEC----CCH---HHHHHHHhhcc------c----CCeEEE-ecc--ccHHHHHHhCCEEEECC----CcchHHH
Confidence 333442 222 22333333210 1 136654 455 47999999999999866 3789999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCC-----Cccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-----GCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRH 515 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~ 515 (755)
||+||. |+|++... |..+.+ .+|.-+.+.|+++++++|.+++.++++.++.+.
T Consensus 298 Ama~g~---------------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~ 356 (382)
T PLN02605 298 ALIRGL---------------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMS 356 (382)
T ss_pred HHHcCC---------------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999975 78888752 333334 343344468999999999999997555666666
Q ss_pred HHHhhHhhhcCHHHHHHHHH
Q 004411 516 EKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 516 ~~~~~~v~~~~~~~W~~~~l 535 (755)
+..+++...+.+..-++..+
T Consensus 357 ~~~~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 357 ENALKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHHHHhcCCchHHHHHHHHH
Confidence 67788777776665555444
No 93
>PLN02423 phosphomannomutase
Probab=99.44 E-value=1.7e-12 Score=135.61 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=100.5
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC-C-C-ceEEcCCceEEEecCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-E-K-LGLSAEHGYFTRWSKN 661 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i-~-~-l~liaenGa~i~~~~~ 661 (755)
++++|+|+||||++ .++..+++++++|++|.+ +..|+++|||++..+.+.|+.. . . ..+|++||+++...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~--~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKELRK--VVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh--CCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45667999999998 456788999999999995 3899999999999999988764 2 2 3689999999985432
Q ss_pred CceeEcc-cCcCccHHHHHHHHHHHHh--------cCCCCcEEeecceEEEEE--eccCCC----------CcchhhHHH
Q 004411 662 SAWEICS-LTRDFDWKEIAEPVMKLYT--------ETTDGSFIEDKETAIVWH--HQHADP----------HFGSCQAKE 720 (755)
Q Consensus 662 ~~w~~~~-~~~~~~w~~~v~~i~~~y~--------~~t~gs~iE~k~~~l~~h--yr~ad~----------~~~~~qa~e 720 (755)
....... ...+ .+.++++++... ....+++++..+..+.+. +.++.. .. .....+
T Consensus 82 ~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~ 157 (245)
T PLN02423 82 LIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKV-HNIRPK 157 (245)
T ss_pred EEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCcc-chHHHH
Confidence 2121111 1122 234444443221 123466776443322221 222200 01 122345
Q ss_pred HHHHHHHHhcCCCeE-EEecCeEEEEEeCCCCCCC
Q 004411 721 LLDHLENVLANEPVV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 721 l~~~L~~~l~~~~~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
+...+.+.+.+..+. +.+|..||||+|+|+|||.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~ 192 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTY 192 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHH
Confidence 666676766542333 3367799999999999984
No 94
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.41 E-value=8.5e-13 Score=138.34 Aligned_cols=158 Identities=15% Similarity=0.228 Sum_probs=104.4
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC----CCceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV----EKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i----~~l~liaenGa~i~~~~ 660 (755)
+.+|++||||||++....+...++++.++++++.+ +++.++++|||+...+++....+ |+ .+|++||+.|+.++
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCC
Confidence 35899999999998433346677999999999996 58899999999999988885432 22 38899999998753
Q ss_pred C----CceeEcccCcCccHH-HHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcC--CC
Q 004411 661 N----SAWEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN--EP 733 (755)
Q Consensus 661 ~----~~w~~~~~~~~~~w~-~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~--~~ 733 (755)
. ..|.. .....|. +.+..+...+...++....+++...+.+.+... ++.++...+.+.+.. ..
T Consensus 79 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~ 148 (249)
T TIGR01485 79 AEVPDQHWAE---YLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLD 148 (249)
T ss_pred CCcCCHHHHH---HHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCC
Confidence 1 11211 1123343 334555555555555555566667777764421 122334444444432 23
Q ss_pred eE-EEecCeEEEEEeCCCCCCC
Q 004411 734 VV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 734 ~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
+. +.+|..++||+|+++|||.
T Consensus 149 ~~~~~~~~~~ldi~~~~~~K~~ 170 (249)
T TIGR01485 149 VKLIYSSGKDLDILPQGSGKGQ 170 (249)
T ss_pred EEEEEECCceEEEEeCCCChHH
Confidence 34 4688899999999999984
No 95
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.40 E-value=4.3e-12 Score=134.70 Aligned_cols=71 Identities=21% Similarity=0.245 Sum_probs=62.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.|+|++|+||||++ .++.++++++++|++|.+ +|..|+++|||++..+.+.+..+. +.++|+.||+.|+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcC
Confidence 58999999999998 456799999999999996 599999999999999999887652 346899999999864
No 96
>PRK10976 putative hydrolase; Provisional
Probab=99.36 E-value=7.4e-12 Score=132.43 Aligned_cols=71 Identities=20% Similarity=0.200 Sum_probs=62.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
+|+|++|+||||++ .++.++++++++|++|.+ +|..|+|+|||++..+.+.+..++ +.++|+.||+.++..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECC
Confidence 58999999999998 456789999999999996 599999999999999998887663 346899999999864
No 97
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.34 E-value=7.4e-11 Score=131.26 Aligned_cols=185 Identities=12% Similarity=0.114 Sum_probs=140.1
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCCCC-CcEEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNP-ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p-~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
.+.+...+-|+.+-||+...|.||..+...-|+.. ....++..+++ ..+...+..++.+++.+++++.+. +|
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g----- 345 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG----- 345 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----
Confidence 37789999999999999999999999988775411 12334444432 223334455667788888877532 23
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
.++++..+.++.+...+++.+.+..+++..|.||+|++|||+||. |+|++..+|..+++
T Consensus 346 ~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl---------------------PvvAt~~GGP~EiV 404 (495)
T KOG0853|consen 346 QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL---------------------PVVATNNGGPAEIV 404 (495)
T ss_pred ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC---------------------CEEEecCCCceEEE
Confidence 255565677888888888888888888888999999999999975 89999999999998
Q ss_pred C---CcEEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHHHHHHH
Q 004411 483 S---GAIRVNPWNVD---AVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERAC 542 (755)
Q Consensus 483 ~---~ai~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~ 542 (755)
. +|++++| +.+ .+|++|.++.+.|. .+.++.++++++|.+ +++ +.|.+.+....
T Consensus 405 ~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~ 465 (495)
T KOG0853|consen 405 VHGVTGLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVL 465 (495)
T ss_pred EcCCcceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHh
Confidence 3 6999999 666 59999999999875 477778889999988 665 44555554443
No 98
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.34 E-value=3.2e-11 Score=127.83 Aligned_cols=72 Identities=18% Similarity=0.232 Sum_probs=62.0
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC----CceEEcCCceEEEec
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRWS 659 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~----~l~liaenGa~i~~~ 659 (755)
++|+|++|+||||++ .++.++++++++|++|.+ .|..|+|+|||++..+...+..+. ..++|+.||+.|+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 368999999999998 456789999999999996 599999999999999998887653 135899999999863
No 99
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.29 E-value=8.8e-11 Score=124.46 Aligned_cols=197 Identities=21% Similarity=0.314 Sum_probs=142.3
Q ss_pred EEEEEeccCCccccccc-ccCchhHHHHHHHHHHcCC--ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 290 SIKILPVGIHMGQFESI-MSLDVTGQKVKELKEKFDG--KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
.+.++|+|+++..+... .. ...+ +.+++++||+.+.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56778999999988642 00 0112 47899999999999999999999999877666 34666
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|... +. ...+..++...+.. ..|.+ .+.++.+++..+|+.||+++.||..||||++.+|||+||
T Consensus 236 ~g~~~-----~~---~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGP-----ER---REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCC-----cc---HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 66432 11 12233344443321 13555 567888899999999999999999999999999999996
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C--cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI- 522 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v- 522 (755)
. |+|+|...|..+.+. + |+++++.|.+++++++..++++. +.+....+..++.+
T Consensus 301 ~---------------------pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~ 358 (381)
T COG0438 301 T---------------------PVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVE 358 (381)
T ss_pred C---------------------cEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHH
Confidence 4 889999998888884 3 78888888999999999999987 33444333344444
Q ss_pred hhcCHHHHHHHHHHHHHH
Q 004411 523 SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 523 ~~~~~~~W~~~~l~~l~~ 540 (755)
..+++..-++.+.+-+..
T Consensus 359 ~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 359 EEFSWERIAEQLLELYEE 376 (381)
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 466766666655554444
No 100
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.29 E-value=5.7e-10 Score=124.10 Aligned_cols=268 Identities=11% Similarity=0.101 Sum_probs=159.3
Q ss_pred HHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHH
Q 004411 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDY 257 (755)
Q Consensus 178 ~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~ 257 (755)
.-..++++..+| |+|+.| +....++.+.+....++|+....+-..+.. ..+ .-.+|.+...+...
T Consensus 94 ~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~---------~~~---~~~ad~i~~~s~~~ 158 (380)
T PRK13609 94 KRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHK---------IWV---HREVDRYFVATDHV 158 (380)
T ss_pred HHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCc---------ccc---cCCCCEEEECCHHH
Confidence 334456666677 888885 555667766666555677653332111110 001 12578888777655
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcc-cccccccCchhHHHHHHHHHHc---CCce-EEEEe
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMG-QFESIMSLDVTGQKVKELKEKF---DGKI-VILGV 332 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~-~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~V 332 (755)
.+.+.+ .|++ ..+|.++ |++.. .|.... + ...+++++ ++++ +++..
T Consensus 159 ~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~~---~----~~~~~~~~~l~~~~~~il~~~ 209 (380)
T PRK13609 159 KKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELKI---N----PDIIYNKYQLCPNKKILLIMA 209 (380)
T ss_pred HHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCcC---C----HHHHHHHcCCCCCCcEEEEEc
Confidence 444432 1321 1233333 44332 233211 1 12345555 2444 55667
Q ss_pred ccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004411 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (755)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~ 412 (755)
|++...||+..+++++.+ .|+++ ++++++. ++ .+++++++++++. + ..|+++ +.+
T Consensus 210 G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~----~~~~~l~~~~~~~----~----~~v~~~-g~~- 264 (380)
T PRK13609 210 GAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NE----ALKQSLEDLQETN----P----DALKVF-GYV- 264 (380)
T ss_pred CCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CH----HHHHHHHHHHhcC----C----CcEEEE-ech-
Confidence 899989999988888642 35554 6666532 11 2334555554332 1 147766 454
Q ss_pred hhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeC-CCCcc----ccc-CCcE
Q 004411 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCS----PSL-SGAI 486 (755)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~ai 486 (755)
+++..+|+.||+++. ++.|++++|||+||. |+|++. ..|.. ..+ ..|.
T Consensus 265 -~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~---------------------PvI~~~~~~g~~~~n~~~~~~~G~ 318 (380)
T PRK13609 265 -ENIDELFRVTSCMIT----KPGGITLSEAAALGV---------------------PVILYKPVPGQEKENAMYFERKGA 318 (380)
T ss_pred -hhHHHHHHhccEEEe----CCCchHHHHHHHhCC---------------------CEEECCCCCCcchHHHHHHHhCCc
Confidence 468899999999874 445899999999975 777765 44421 122 2355
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 487 RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
.+.+.|+++++++|.++++++ +.+..+.++.+++...+++...++.+++.+...
T Consensus 319 ~~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALLQDD-MKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred EEEECCHHHHHHHHHHHHCCH-HHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 555689999999999999864 345555556667777788888888887766543
No 101
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.28 E-value=4.2e-11 Score=125.97 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=60.9
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
+|++|+||||++ .+..++++++++|++|.+. |..++++|||++..+.+.+..+. +.++|+.||+.+...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCC
Confidence 689999999998 4567889999999999974 99999999999999999887763 3479999999998763
No 102
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.28 E-value=5.5e-11 Score=122.82 Aligned_cols=71 Identities=18% Similarity=0.136 Sum_probs=61.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||+...+.+.+..++ +.++|++||+++...
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITD---KDRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEc
Confidence 68999999999998 456688999999999996 599999999999999888776552 246899999999875
No 103
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.28 E-value=4.8e-11 Score=126.69 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=62.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC--CceEEcCCceEEEecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE--KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~--~l~liaenGa~i~~~~ 660 (755)
.+++|++|+||||++ .++.++++++++|++|.+ .|..|+++|||++..+..++..+. ..++|++||+.|+.+.
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 479999999999998 355678999999999996 599999999999999999987663 2469999999998753
No 104
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.28 E-value=1.7e-10 Score=127.14 Aligned_cols=256 Identities=13% Similarity=0.078 Sum_probs=157.4
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~F 261 (755)
++++..+| |+|+.|+....+.+. +..+..+.|+.++.|..+|.. .+.++ .-.+|.+...+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---h
Confidence 34444455 999999865544444 334455788887766545420 01111 11345443333210 0
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCC
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KG 340 (755)
. . ....++.++|+|||.+.+.+. .. ..++ .. .+.++|+.+++....|+
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~ 197 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARV 197 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHH
Confidence 0 0 112468889999998766431 10 0111 12 36788899999999999
Q ss_pred hHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 341 ISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 341 i~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
+..++ +|++++.+ .| .+++++|. ++. +++++.+ + . +. . |.+. +.+ +++..+
T Consensus 198 ~~~~l~~a~~~~~~-~~-----~~~~~~G~-----g~~-~~~~~~~----~-~----~~---~-v~~~-g~~--~~~~~~ 249 (357)
T PRK00726 198 LNEAVPEALALLPE-AL-----QVIHQTGK-----GDL-EEVRAAY----A-A----GI---N-AEVV-PFI--DDMAAA 249 (357)
T ss_pred HHHHHHHHHHHhhh-Cc-----EEEEEcCC-----CcH-HHHHHHh----h-c----CC---c-EEEe-ehH--hhHHHH
Confidence 87776 88887743 22 23556663 221 2222221 1 1 21 1 5544 444 689999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc--------cccc---CCcEEe
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--------SPSL---SGAIRV 488 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~ai~V 488 (755)
|..||+++.+| | +.+.+|||+||. |+|++...|. ++.+ ..|+++
T Consensus 250 ~~~~d~~i~~~---g-~~~~~Ea~~~g~---------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~ 304 (357)
T PRK00726 250 YAAADLVICRA---G-ASTVAELAAAGL---------------------PAILVPLPHAADDHQTANARALVDAGAALLI 304 (357)
T ss_pred HHhCCEEEECC---C-HHHHHHHHHhCC---------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEE
Confidence 99999999877 3 578999999975 6676654321 2334 247889
Q ss_pred CCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 489 NPWN--VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 489 nP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
+|.| +++++++|.+++.+ ++.++...+..+++..+.+...-++.+++.+
T Consensus 305 ~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 305 PQSDLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred EcccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 9888 99999999999997 4466666667788887787777777776554
No 105
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.26 E-value=8.2e-11 Score=121.98 Aligned_cols=157 Identities=20% Similarity=0.247 Sum_probs=101.8
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCCce-e
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSAW-E 665 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~~w-~ 665 (755)
||+|+||||++ .+..++++++++|++|.+ .|+.++++|||++..+.+++..++ ..++|++||+.+....+... .
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 456699999999999997 499999999999999999998663 25899999999944322222 2
Q ss_pred EcccCcCccHHHHHHHHHHHHhcC--------CCCcEEeecc-----------eEEEEEec--cC--CCC-------cch
Q 004411 666 ICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKE-----------TAIVWHHQ--HA--DPH-------FGS 715 (755)
Q Consensus 666 ~~~~~~~~~w~~~v~~i~~~y~~~--------t~gs~iE~k~-----------~~l~~hyr--~a--d~~-------~~~ 715 (755)
. ..+ .+.+..+++..... ..+.|+.... ......+. .. ..+ ...
T Consensus 77 ~---~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 K---PID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp E---SB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred h---hee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 2 223 34444555443321 1222222220 00000000 00 000 113
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 716 ~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
.+..++.++|.+.+.+....+.++..++||.|+++|||+
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ 189 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGS 189 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHH
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHH
Confidence 456677888888776643556689999999999999984
No 106
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.24 E-value=2e-10 Score=115.93 Aligned_cols=111 Identities=20% Similarity=0.227 Sum_probs=82.3
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004411 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (755)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~ 410 (755)
++||+.+.||+..+++|+..+.+++|+++ ++++|... +....+ .+... .+. ...|.+++ .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~----~~~~~----~~~--~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLE----ELLAA----LLL--LDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHH----HHHHh----cCC--cccEEEeC-C
Confidence 89999999999999999999988887765 88887432 111111 11111 111 12477665 4
Q ss_pred C-ChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 411 L-STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 411 v-~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
+ +.+++..+++.||+++.||..||++...+|||+||. |+|+|+..+..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~---------------------pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL---------------------PVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC---------------------CEEEcCCCCcceEE
Confidence 4 556666777779999999999999999999999964 89999999887755
No 107
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.23 E-value=7.9e-10 Score=121.07 Aligned_cols=246 Identities=14% Similarity=0.151 Sum_probs=147.3
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~F 261 (755)
++++..+| |+|+.|..... ++..+..+..++|+.++.|..||. .. +.++ ...+|.|...+....+.
T Consensus 83 ~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 83 KILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc-
Confidence 44455565 89999876543 333343444467777655555542 10 1111 11257766655432211
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEecccccc
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLF 338 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 338 (755)
+ ...++.++|+|+|.+.+.+. + . ++++ +++++|+.+++....
T Consensus 149 ----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~~~ 193 (350)
T cd03785 149 ----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQGA 193 (350)
T ss_pred ----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcHhH
Confidence 0 12366788999998766431 0 0 2333 467788888887778
Q ss_pred CChHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 339 KGISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 339 KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
|+...++ .|++.+. + ++ +.++.+++ .+ +.++++ +.+.+. +. .|++++ .+ +++.
T Consensus 194 ~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~----~~~~~~----~~----~v~~~g-~~--~~~~ 247 (350)
T cd03785 194 RAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVK----KAYEEL----GV----NYEVFP-FI--DDMA 247 (350)
T ss_pred HHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHH----HHHhcc----CC----CeEEee-hh--hhHH
Confidence 8877654 7777663 2 22 33333332 22 223333 333322 11 266554 33 7899
Q ss_pred HHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----c----cccc---CCcE
Q 004411 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----C----SPSL---SGAI 486 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~ai 486 (755)
.+|+.||++|.+| | +.+++|||+||. |+|++...| + ++.+ ..|+
T Consensus 248 ~~l~~ad~~v~~s---g-~~t~~Eam~~G~---------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~ 302 (350)
T cd03785 248 AAYAAADLVISRA---G-ASTVAELAALGL---------------------PAILIPLPYAADDHQTANARALVKAGAAV 302 (350)
T ss_pred HHHHhcCEEEECC---C-HhHHHHHHHhCC---------------------CEEEeecCCCCCCcHHHhHHHHHhCCCEE
Confidence 9999999999876 3 578999999975 677765443 1 2334 2489
Q ss_pred EeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHH
Q 004411 487 RVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVA 528 (755)
Q Consensus 487 ~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 528 (755)
+|+|. |.++++++|.+++.. ++.++...++.++++..+...
T Consensus 303 ~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 303 LIPQEELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred EEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHH
Confidence 99987 899999999999974 445566666677777655433
No 108
>PLN02887 hydrolase family protein
Probab=99.21 E-value=2.4e-10 Score=131.99 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=61.3
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC---Cc-------eEEcCC
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KL-------GLSAEH 652 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~---~l-------~liaen 652 (755)
.+.|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||++..+.+.+..+. .. ++|+.|
T Consensus 306 ~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~N 381 (580)
T PLN02887 306 PKFSYIFCDMDGTLLN---SKSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQ 381 (580)
T ss_pred cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeec
Confidence 4789999999999998 467799999999999997 599999999999999988887542 11 355679
Q ss_pred ceEEEec
Q 004411 653 GYFTRWS 659 (755)
Q Consensus 653 Ga~i~~~ 659 (755)
|+.|+..
T Consensus 382 GA~I~d~ 388 (580)
T PLN02887 382 GLLVYGR 388 (580)
T ss_pred CeEEEEC
Confidence 9999864
No 109
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.21 E-value=1.2e-10 Score=119.22 Aligned_cols=72 Identities=18% Similarity=0.180 Sum_probs=62.6
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
+|+|++|+||||++ .++.+++++.++|++|++ +++.|+++|||++..+++.+..++ +.++|++||+++...+
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK 73 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC
Confidence 47999999999998 456788999999999986 699999999999999999887663 2469999999999864
No 110
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.20 E-value=2.9e-10 Score=120.46 Aligned_cols=71 Identities=24% Similarity=0.302 Sum_probs=62.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
+|+|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||++..+.+.+..+. +.++|+.||+.++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEec
Confidence 68999999999998 456788999999999997 599999999999999998887763 346999999999864
No 111
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.19 E-value=1.2e-09 Score=120.99 Aligned_cols=251 Identities=15% Similarity=0.151 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchH-HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhh--hCCEEEEe
Q 004411 177 KVFADKVMEVINPDEDYVWIHDYHLMVL-PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFH 253 (755)
Q Consensus 177 ~~fa~~i~~~~~~~~DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll--~~Dligf~ 253 (755)
..+++.+ +..+| |+|++|......+ ...+.+ ..++|+++..+-. -+.+.+. |+.+++.+.+. .+|++.-.
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~-~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~ 148 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAF-YLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAP 148 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHH-HhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCC
Confidence 3454444 34466 9999996544433 344433 3467886542211 1111111 12233323221 25776667
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcC-CceEEEE-
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILG- 331 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~- 331 (755)
+....+++++ +|.+ ..+|.++++|+....+..... .....++++++ ++.+++.
T Consensus 149 s~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~ 203 (365)
T TIGR00236 149 TEQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLT 203 (365)
T ss_pred CHHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEe
Confidence 7776666653 2322 346788899963222221100 01133455553 3344444
Q ss_pred ecccc-ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004411 332 VDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (755)
Q Consensus 332 VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~ 410 (755)
..|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ . ...|.++ +.
T Consensus 204 ~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~~-~~ 262 (365)
T TIGR00236 204 LHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHLI-EP 262 (365)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEEE-CC
Confidence 44653 45999999999999988888765 65554332 11 1122 222221 1 1146655 57
Q ss_pred CChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe-CCCCcccccC-C-cEE
Q 004411 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSLS-G-AIR 487 (755)
Q Consensus 411 v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~-~-ai~ 487 (755)
++..++..+|+.||+++.+| |.+..|||+||. |+|.+ ..+|..+.+. + +++
T Consensus 263 ~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~---------------------PvI~~~~~~~~~e~~~~g~~~l 316 (365)
T TIGR00236 263 LEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK---------------------PVLVLRDTTERPETVEAGTNKL 316 (365)
T ss_pred CChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC---------------------CEEECCCCCCChHHHhcCceEE
Confidence 88999999999999999888 445799999975 66764 5556555553 3 556
Q ss_pred eCCCCHHHHHHHHHHHhcCC
Q 004411 488 VNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 488 VnP~d~~~~A~ai~~aL~m~ 507 (755)
+ |.|+++++++|.++++.+
T Consensus 317 v-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 317 V-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred e-CCCHHHHHHHHHHHHhCh
Confidence 6 579999999999999864
No 112
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.19 E-value=1.1e-10 Score=119.95 Aligned_cols=69 Identities=14% Similarity=0.145 Sum_probs=58.0
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-C-ceEEcCCceEEEec
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K-LGLSAEHGYFTRWS 659 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~-l~liaenGa~i~~~ 659 (755)
+|++|+||||++. ++..+++++++|++|.+ ++..|+++|||+...++..+..+. + .++|++||+.|+..
T Consensus 1 ~i~~DlDGTLL~~---~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 71 (221)
T TIGR02463 1 WVFSDLDGTLLDS---HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLE 71 (221)
T ss_pred CEEEeCCCCCcCC---CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcC
Confidence 5899999999983 34455569999999986 589999999999999999988763 2 46999999999875
No 113
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.16 E-value=1.8e-10 Score=118.43 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=59.6
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
|++|+||||++ .+..+++++.++|++|.+ .|+.++++|||++..+.+++..++ ..++|++||++++..+
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 70 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNE 70 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCC
Confidence 68999999998 456688999999999996 599999999999999888877664 4579999999998764
No 114
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.16 E-value=3e-10 Score=118.06 Aligned_cols=152 Identities=17% Similarity=0.213 Sum_probs=93.2
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-C--ceEEcCCceEEEecCC--
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K--LGLSAEHGYFTRWSKN-- 661 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~--l~liaenGa~i~~~~~-- 661 (755)
||++||||||++ .+...++.. ++++ +. ++++.++++|||++..+.+++..++ . ..+|++||+.|+....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 689999999998 344455544 7776 44 4688999999999999999997662 1 2389999999876531
Q ss_pred --CceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecce--EEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeE-E
Q 004411 662 --SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKET--AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV-V 736 (755)
Q Consensus 662 --~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~--~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~-V 736 (755)
..|.. .....|. ...+ ..+....+|..++.+.. ...++++.. ++.. ....++.+.+.+. ...+. +
T Consensus 75 ~~~~~~~---~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~--~~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQK---HIDHDWR--RQAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ--SQAAKVI 144 (236)
T ss_pred CChhHHH---HHhcCCC--HHHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc--cCCEEEE
Confidence 11210 0111221 1122 23334566777766552 345566543 2211 1233444455443 22333 4
Q ss_pred EecCeEEEEEeCCCCCCC
Q 004411 737 KRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 737 ~sG~~~VEV~p~gvnKG~ 754 (755)
.++..++|+.|+++|||.
T Consensus 145 ~~~~~~~ei~~~~~~K~~ 162 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGL 162 (236)
T ss_pred EECCceEEEeeCCCChHH
Confidence 577789999999999984
No 115
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.14 E-value=1.6e-09 Score=118.47 Aligned_cols=180 Identities=14% Similarity=0.113 Sum_probs=116.3
Q ss_pred EEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCChHHH-HHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLK-FLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 292 ~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~-l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
.++|+|+|...+.+. . . ..++ .+ +++++|+++||....|++... +.|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999997655321 0 0 1111 12 467889999998888987664 4788777542 222 333442
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCC
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~ 449 (755)
+++. + ++++.+.+.+. ..++.+. ..++..+|+.||++|.+| | +.+.+|||+||.
T Consensus 218 ----~~~~-~----~l~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~-- 271 (348)
T TIGR01133 218 ----KNDL-E----KVKNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAGV-- 271 (348)
T ss_pred ----cchH-H----HHHHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC--
Confidence 2221 2 33444433221 1233232 238899999999999865 4 689999999975
Q ss_pred CccccccCCCCCCCCCCCceEEEeCCCCc-------cccc---CCcEEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHH
Q 004411 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGC-------SPSL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEK 517 (755)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-------~~~l---~~ai~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~ 517 (755)
|+|++.+.|. ++.+ ..|++++|.| +++++++|.++++. ++.++.+.+.
T Consensus 272 -------------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~ 331 (348)
T TIGR01133 272 -------------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEA 331 (348)
T ss_pred -------------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 7787776542 2334 2489999876 99999999999975 4556666777
Q ss_pred HhhHhhhcCHHHHHH
Q 004411 518 HYKYISSHDVAYWAK 532 (755)
Q Consensus 518 ~~~~v~~~~~~~W~~ 532 (755)
+++++..+...++++
T Consensus 332 ~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 332 ARKLAKPDAAKRIAE 346 (348)
T ss_pred HHhcCCccHHHHHHh
Confidence 888887776666554
No 116
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.12 E-value=7.2e-09 Score=115.95 Aligned_cols=270 Identities=10% Similarity=0.088 Sum_probs=155.6
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHH
Q 004411 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 181 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~ 260 (755)
.++++..+| |+|.++ +....+..+.+++..++|+.. .++-+-.... | + --.+|.+-..+....+.
T Consensus 97 ~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w----~--~~~~d~~~v~s~~~~~~ 161 (391)
T PRK13608 97 INLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W----I--TPYSTRYYVATKETKQD 161 (391)
T ss_pred HHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c----c--cCCCCEEEECCHHHHHH
Confidence 344555677 888875 222233333333344677643 3433311000 0 0 12478877777655444
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCc-eEEEEecccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGK-IVILGVDDMD 336 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~vil~VdRld 336 (755)
+.+ .|++ ..+|.++++.|+. .|..... ..++++++ +++ .+++++||+.
T Consensus 162 l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~~-------~~~~~~~~~l~~~~~~ilv~~G~lg 213 (391)
T PRK13608 162 FID-----VGID---------------PSTVKVTGIPIDN-KFETPID-------QKQWLIDNNLDPDKQTILMSAGAFG 213 (391)
T ss_pred HHH-----cCCC---------------HHHEEEECeecCh-Hhccccc-------HHHHHHHcCCCCCCCEEEEECCCcc
Confidence 432 1321 1244445555553 3432111 12344454 244 4567799999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
..||+..+++++ ++..|+++ ++++++. ++ ++.+++.+. .+.. ..|+++ |.+ +++
T Consensus 214 ~~k~~~~li~~~---~~~~~~~~----~vvv~G~----~~---~l~~~l~~~---~~~~------~~v~~~-G~~--~~~ 267 (391)
T PRK13608 214 VSKGFDTMITDI---LAKSANAQ----VVMICGK----SK---ELKRSLTAK---FKSN------ENVLIL-GYT--KHM 267 (391)
T ss_pred cchhHHHHHHHH---HhcCCCce----EEEEcCC----CH---HHHHHHHHH---hccC------CCeEEE-ecc--chH
Confidence 999999999885 34456554 6555532 22 122333322 2211 136554 444 579
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc-----c-CCcEEeCC
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-----L-SGAIRVNP 490 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-----l-~~ai~VnP 490 (755)
..+|+.||+++.. +.|++..|||+||. |+|++...+..+. + ..|.-+-+
T Consensus 268 ~~~~~~aDl~I~k----~gg~tl~EA~a~G~---------------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~ 322 (391)
T PRK13608 268 NEWMASSQLMITK----PGGITISEGLARCI---------------------PMIFLNPAPGQELENALYFEEKGFGKIA 322 (391)
T ss_pred HHHHHhhhEEEeC----CchHHHHHHHHhCC---------------------CEEECCCCCCcchhHHHHHHhCCcEEEe
Confidence 9999999999863 45889999999975 6777653322221 1 22333335
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHHHhc
Q 004411 491 WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (755)
Q Consensus 491 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (755)
.|.++++++|.++++++ +.+..+.++.+++...++...-++.+++.+...++.+
T Consensus 323 ~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 323 DTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 69999999999999864 4556666677888888888888888887776655443
No 117
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.12 E-value=4.8e-09 Score=115.58 Aligned_cols=251 Identities=14% Similarity=0.070 Sum_probs=141.9
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCCh--HHHHHHhhhCCEEEEeC
Q 004411 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR--DEILKSLLNSDLIGFHT 254 (755)
Q Consensus 177 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~--~~il~~ll~~Dligf~t 254 (755)
..+.+.+.+. +| |+|++|++....++..+..+..++|+.++.|--. +.+ +..|+. +..+. -.+|.+-.-+
T Consensus 78 ~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~~r~~~~--~~ad~~~~~s 149 (363)
T cd03786 78 IGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEENRHAID--KLSDLHFAPT 149 (363)
T ss_pred HHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchHHHHHHH--HHhhhccCCC
Confidence 3444445444 66 8999998776655554444445788876554211 000 011211 11111 1346555445
Q ss_pred HHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccC-CcccccccccCchhHHHHHHHHHHc---CCceEEE
Q 004411 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKF---DGKIVIL 330 (755)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 330 (755)
....+++.+ .| ....+|.++++++ |...+..... . ....++.+ .++.+++
T Consensus 150 ~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~~vlv 203 (363)
T cd03786 150 EEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKKYILV 203 (363)
T ss_pred HHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCCEEEE
Confidence 444444332 12 1234677788775 5443322110 0 01112223 2455777
Q ss_pred Eeccccc---cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEe
Q 004411 331 GVDDMDL---FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVII 407 (755)
Q Consensus 331 ~VdRld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~ 407 (755)
.++|+.. .||+..+++|++++.+. ++.++..+. ++..+ ++++.+.+.+.. . ..|.++
T Consensus 204 ~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~----~l~~~~~~~~~~--~---~~v~~~ 263 (363)
T cd03786 204 TLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRP----RIREAGLEFLGH--H---PNVLLI 263 (363)
T ss_pred EeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHH----HHHHHHHhhccC--C---CCEEEE
Confidence 8999875 79999999999987432 233443332 22222 334444433220 0 136655
Q ss_pred cCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcE
Q 004411 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAI 486 (755)
Q Consensus 408 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai 486 (755)
+....+++..+|+.||++|.+|- | +..|+++||. |+|++...+..+.+ .+|+
T Consensus 264 -~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~---------------------PvI~~~~~~~~~~~~~~g~ 316 (363)
T cd03786 264 -SPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV---------------------PVLNLRDRTERPETVESGT 316 (363)
T ss_pred -CCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC---------------------CEEeeCCCCccchhhheee
Confidence 45678899999999999999994 4 4689999965 67777655544444 4555
Q ss_pred EeCC-CCHHHHHHHHHHHhcCCH
Q 004411 487 RVNP-WNVDAVADAMDSALQMEN 508 (755)
Q Consensus 487 ~VnP-~d~~~~A~ai~~aL~m~~ 508 (755)
.+.+ .|+++++++|.++++.+.
T Consensus 317 ~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 317 NVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEecCCCHHHHHHHHHHHhcCch
Confidence 4443 379999999999998764
No 118
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.12 E-value=5.6e-10 Score=117.50 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=58.1
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCC
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~ 661 (755)
+|++|+||||++. .....+.++++|++|.+ .|..|+++|||+...+.+++..++ ..++|++||++++..++
T Consensus 1 li~~DlDGTll~~---~~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDP---HGYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCC---CCcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCC
Confidence 6899999999983 33233468999999986 489999999999999999888763 24799999999987643
No 119
>PLN02382 probable sucrose-phosphatase
Probab=99.12 E-value=3e-10 Score=127.18 Aligned_cols=162 Identities=14% Similarity=0.171 Sum_probs=98.1
Q ss_pred hhccCceEEEecCCCcCCCCCCCCCCCC-HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh---hcCC-CCceEEcCCce
Q 004411 580 YNKTNSRLILLDYDGTVMPQTSEDKRPS-TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW---FSGV-EKLGLSAEHGY 654 (755)
Q Consensus 580 y~~s~~rlI~lD~DGTL~~~~~~~~~p~-~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~---f~~i-~~l~liaenGa 654 (755)
+..+.+.+|++|+||||++.. .++..+ .++..+++++.+ ++..++++|||+.....+. |... |+ .+|+.||+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt 80 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGT 80 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCc
Confidence 345678899999999999843 233455 444555588775 5888999999996655554 4322 44 36677999
Q ss_pred EEEecCC----CceeEcccCcCccHH-HHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHh
Q 004411 655 FTRWSKN----SAWEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVL 729 (755)
Q Consensus 655 ~i~~~~~----~~w~~~~~~~~~~w~-~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l 729 (755)
.|...+. ..|... .+..|. ..+.+.+..|.........+++...+.+++.+. .+.++...+.+.+
T Consensus 81 ~I~~~~~~~~d~~w~~~---l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~ 150 (413)
T PLN02382 81 EIAYGESMVPDHGWVEY---LNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERL 150 (413)
T ss_pred EEEeCCCCccChhHHHH---HhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHH
Confidence 9986431 123221 223443 223344444432233344555666777765432 2234455555555
Q ss_pred cC--CCeE-EEecCeEEEEEeCCCCCCC
Q 004411 730 AN--EPVV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 730 ~~--~~~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
.. ..+. +.+|..++||.|+++|||.
T Consensus 151 ~~~g~~~~i~~s~~~~ldI~p~g~sKg~ 178 (413)
T PLN02382 151 EKRGLDVKIIYSGGIDLDVLPQGAGKGQ 178 (413)
T ss_pred HhcCCcEEEEEECCcEEEEEeCCCCHHH
Confidence 32 2344 3588999999999999984
No 120
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.09 E-value=3.2e-08 Score=115.48 Aligned_cols=182 Identities=10% Similarity=0.117 Sum_probs=120.1
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
++..+|..|.|+...||..+++.+++++++ ++|+. .+.+|..|.....+. .-.++.+.+.+++++ -.|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc--ccCC--C-
Confidence 356689999999999999999999999985 55652 366777775432221 123455666666542 0122 1
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEE-cCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAECCVV-NCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vv-tS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 479 (755)
.|+|+. ..+..--..+|..||++++ ||. .|.-|+.-+-||.- |.|..|-.-|..
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n----------------------GgL~~sv~DG~~ 514 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN----------------------GVLNLSILDGWW 514 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc----------------------CCceeecccCcc
Confidence 477765 4455556679999999999 777 89999988877774 456666666654
Q ss_pred ccc---CCcEEeCC------------CCHHHHHHHHHHHh-c----CCH----HHHHHHHHH-HhhHhhhcCHHHHHHHH
Q 004411 480 PSL---SGAIRVNP------------WNVDAVADAMDSAL-Q----MEN----QEKILRHEK-HYKYISSHDVAYWAKSI 534 (755)
Q Consensus 480 ~~l---~~ai~VnP------------~d~~~~A~ai~~aL-~----m~~----~er~~r~~~-~~~~v~~~~~~~W~~~~ 534 (755)
.+. .+|+.+.+ .|.+++-++|.+++ . .+. .+...++++ |..-...+++.+-++.|
T Consensus 515 ~E~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y 594 (601)
T TIGR02094 515 GEGYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREY 594 (601)
T ss_pred cccCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence 443 25888885 89999999998877 2 211 122233322 22223357888888877
Q ss_pred HHH
Q 004411 535 DQD 537 (755)
Q Consensus 535 l~~ 537 (755)
.+.
T Consensus 595 ~~~ 597 (601)
T TIGR02094 595 VDK 597 (601)
T ss_pred HHH
Confidence 653
No 121
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.04 E-value=1.2e-09 Score=114.48 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=61.3
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.|+||+|+||||++. ....++.++++|++|.+ .++.|+++|||.+..+..++..+. +.++|++||+.|..+
T Consensus 1 ~KLIftDLDGTLLd~---~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDL---EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEc
Confidence 489999999999983 45567889999999997 599999999999999999887663 237999999999876
No 122
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.03 E-value=2.9e-09 Score=122.82 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=62.1
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
++|+||+|+||||++. +...+++++++|++|.+ .|+.|+++|||++..+..++..+. +.++|++||+.|+.+.
T Consensus 415 ~~KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP---LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred eeeEEEEECcCCCcCC---CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 6799999999999983 44566789999999996 589999999999999988887663 2469999999999864
No 123
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.00 E-value=2.5e-09 Score=113.73 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=61.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.+|+|++|+||||++ .+..+++++.++|++|.+ .+..++|+|||+...+...+..+. ..++|++||++|+.+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~ 75 (273)
T PRK00192 3 MKLLVFTDLDGTLLD---HHTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIP 75 (273)
T ss_pred cceEEEEcCcccCcC---CCCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEec
Confidence 478999999999998 345567889999999996 589999999999999988887663 246999999999875
No 124
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.92 E-value=2.6e-09 Score=100.36 Aligned_cols=128 Identities=19% Similarity=0.245 Sum_probs=90.0
Q ss_pred ceEEEEeccccccCChHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 326 KIVILGVDDMDLFKGISLKFL-AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
..+|++.|++...||+..+++ |++++.+++|+++ |+++|.. ++ +++++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~-----~~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNG-----PD------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECES-----S-------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCC-----HH------HHHHh----cC-------CCE
Confidence 357899999999999999999 9999999999755 8877752 22 12222 11 137
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
.+.+ .+ +|+.++|+.||+++.|+. .+|++...+|||++|. |+|+|.. |+...+.
T Consensus 56 ~~~g-~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~---------------------pvi~~~~-~~~~~~~ 110 (135)
T PF13692_consen 56 RFHG-FV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK---------------------PVIASDN-GAEGIVE 110 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT-----------------------EEEEHH-HCHCHS-
T ss_pred EEcC-CH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC---------------------CEEECCc-chhhhee
Confidence 7654 55 689999999999999985 7899999999999975 8888888 6666552
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhc
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQ 505 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~ 505 (755)
.++.+ +.|+++++++|.+++.
T Consensus 111 ~~~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 111 EDGCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp --SEEEE--TT-HHHHHHHHHHHHH
T ss_pred ecCCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999885
No 125
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.92 E-value=7.3e-08 Score=107.06 Aligned_cols=149 Identities=16% Similarity=0.151 Sum_probs=95.5
Q ss_pred HHHHHcC---CceE-EEEe-ccccccC-ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004411 318 ELKEKFD---GKIV-ILGV-DDMDLFK-GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (755)
Q Consensus 318 ~lr~~~~---~~~v-il~V-dRld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~ 391 (755)
.++++++ ++++ ++.. +|....| ++..+++|++.+.+++|+++ +++++.+ ++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~~----~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLVN----PKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCC----hhhH----HHHHHHHhh
Confidence 3455552 4444 3333 4766654 47889999999988888765 6666531 2222 233344332
Q ss_pred HhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEE
Q 004411 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (755)
Q Consensus 392 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (755)
.. |. .+.++. .++..+|+.||+++++| |.+.+|+|+||. |+|
T Consensus 243 ~~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~---------------------PvI 284 (380)
T PRK00025 243 YA---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV---------------------PMV 284 (380)
T ss_pred cC---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC---------------------CEE
Confidence 10 11 244442 47899999999999998 678889999975 666
Q ss_pred Ee-----------------CCCCcccccCC-----cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 004411 472 VS-----------------EFIGCSPSLSG-----AIRVNPWNVDAVADAMDSALQMENQEKILRHEK 517 (755)
Q Consensus 472 ~S-----------------e~~G~~~~l~~-----ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 517 (755)
++ .+.|..+.+.+ +++++..|++++++++.++|++++ .++.+.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~ 351 (380)
T PRK00025 285 VGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA-RRQALLEG 351 (380)
T ss_pred EEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH-HHHHHHHH
Confidence 65 34444555532 367788899999999999998753 34433333
No 126
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.87 E-value=5.1e-07 Score=94.75 Aligned_cols=190 Identities=12% Similarity=0.157 Sum_probs=136.0
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD--LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
....+|+++.+.|.|+.. .|+-+.-.+.++|. .-.++.|+++| ..|+. +-++..+.+++++.+++..-
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRne--eD~ervk~Lkd~a~~L~i~~------ 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNE--EDEERVKSLKDLAEELKIPK------ 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCCh--hhHHHHHHHHHHHHhcCCcc------
Confidence 457899999999999999 77777788888887 33457787766 55543 33455567888888876541
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
.|.| .-++|.+++..+|..|-+.|-+-..|-||+.+.||||+|.-. +.-.+| .|-.=|+.+..|-
T Consensus 338 ~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIp--i~h~Sg--------GP~lDIV~~~~G~---- 402 (465)
T KOG1387|consen 338 HVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIP--IVHNSG--------GPLLDIVTPWDGE---- 402 (465)
T ss_pred ceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceE--EEeCCC--------CCceeeeeccCCc----
Confidence 3664 458999999999999999999999999999999999996410 000000 0011123232221
Q ss_pred CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 483 SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 483 ~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
..|++. | +.++-|++|.+++.+..+||....+..|..+.++.-+...+.|...+...
T Consensus 403 ~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 403 TTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred cceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 136666 3 67889999999999999998887777888888777776666666555443
No 127
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.86 E-value=1.8e-08 Score=103.94 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=57.4
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
+|++|+||||++. +. .+++++++|++|.+ .|..++++|||+...+..++..+. +-++|++||+.|..+.
T Consensus 1 li~~DlDGTLl~~---~~-~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPP---GY-EPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCC---CC-CchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecC
Confidence 5899999999983 23 44679999999997 489999999999999998887653 2369999999998863
No 128
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.84 E-value=1.6e-07 Score=102.89 Aligned_cols=238 Identities=13% Similarity=0.058 Sum_probs=136.2
Q ss_pred HHHHhCCCCCEEEEeCCccch--HHH-HHHh-hcCCCeEEEEEecCCCchhhhhcCC-ChHHHHHHhhhCCEEEEeCHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMV--LPS-FLRK-RFHRVKVGFFLHSPFPSSEIYRTLP-VRDEILKSLLNSDLIGFHTFDY 257 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~r~lp-~~~~il~~ll~~Dligf~t~~~ 257 (755)
++..+++ +|+|++|..-... ++. ++++ +..++|+++++|--+|.. +.... ........+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 4444566 4999999754331 222 2222 112699999999877632 11111 1222334455689999998876
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccc
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 337 (755)
.+.+.+ .|+. ..++.++|+..+...... +....+++.|+++||+..
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k 180 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEK 180 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEecccccccccccc--------------cccccCCceEEEecChhh
Confidence 655542 1221 112333443332211100 011234568999999994
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
..++. +..|+. .|+++|. |++.. . . ...|.|. |.++.+|+.
T Consensus 181 ~~~l~----------~~~~~~----~l~i~G~-----g~~~~-----------~---~-----~~~V~f~-G~~~~eel~ 221 (333)
T PRK09814 181 SPFLK----------NWSQGI----KLTVFGP-----NPEDL-----------E---N-----SANISYK-GWFDPEELP 221 (333)
T ss_pred chHHH----------hcCCCC----eEEEECC-----Ccccc-----------c---c-----CCCeEEe-cCCCHHHHH
Confidence 33211 124554 3777773 22211 0 0 0136655 689999999
Q ss_pred HHHHhCcEEEEcCCC-----------cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---
Q 004411 418 PYYAIAECCVVNCVR-----------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--- 483 (755)
Q Consensus 418 aly~~ADv~vvtS~~-----------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 483 (755)
++|+. |+++++.-. -.++--..||||||. |+|++..++..+.+.
T Consensus 222 ~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~---------------------PVI~~~~~~~~~~V~~~~ 279 (333)
T PRK09814 222 NELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL---------------------PVIVWSKAAIADFIVENG 279 (333)
T ss_pred HHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC---------------------CEEECCCccHHHHHHhCC
Confidence 99988 666654311 123333677899975 899999999888883
Q ss_pred CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh
Q 004411 484 GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (755)
Q Consensus 484 ~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (755)
.|+.|+ +.++++++|.+. ++++++++.++.++...
T Consensus 280 ~G~~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 280 LGFVVD--SLEELPEIIDNI---TEEEYQEMVENVKKISK 314 (333)
T ss_pred ceEEeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 489998 688999998873 35555555555555443
No 129
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.83 E-value=1.5e-09 Score=113.64 Aligned_cols=156 Identities=17% Similarity=0.238 Sum_probs=91.6
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC----CCceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV----EKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i----~~l~liaenGa~i~~~~ 660 (755)
++||++|+||||++. +....+++.+.++ ....++..++++|||+.+...+.+... | -.+|+++|+.|++..
T Consensus 2 ~~ll~sDlD~Tl~~~---~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~P-d~~I~svGt~I~~~~ 76 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG---DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQP-DYIITSVGTEIYYGE 76 (247)
T ss_dssp SEEEEEETBTTTBHC---HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE--SEEEETTTTEEEESS
T ss_pred CEEEEEECCCCCcCC---CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCC-CEEEecCCeEEEEcC
Confidence 689999999999921 1112345555555 233457778999999999988887643 3 248999999999842
Q ss_pred CCceeEcc---cCcCccHH-HHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCC--e
Q 004411 661 NSAWEICS---LTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEP--V 734 (755)
Q Consensus 661 ~~~w~~~~---~~~~~~w~-~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~--~ 734 (755)
.|.... ...+..|. +.+++++..+..-.+..-.++..+.++|.++..+.. ...+.|+..+.... +
T Consensus 77 --~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~-------~~~~~i~~~l~~~~l~~ 147 (247)
T PF05116_consen 77 --NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA-------DILEEIRARLRQRGLRV 147 (247)
T ss_dssp --TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC-------HHHHHHHHHHHCCTCEE
T ss_pred --CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch-------hHHHHHHHHHHHcCCCe
Confidence 333210 02234563 566677766643222222334445677776643211 22344444443333 3
Q ss_pred EE-EecCeEEEEEeCCCCCCC
Q 004411 735 VV-KRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 735 ~V-~sG~~~VEV~p~gvnKG~ 754 (755)
.+ .++...++|.|+++|||.
T Consensus 148 ~~i~s~~~~ldilP~~a~K~~ 168 (247)
T PF05116_consen 148 NVIYSNGRDLDILPKGASKGA 168 (247)
T ss_dssp EEEECTCCEEEEEETT-SHHH
T ss_pred eEEEccceeEEEccCCCCHHH
Confidence 43 478899999999999984
No 130
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.81 E-value=2.5e-06 Score=96.98 Aligned_cols=303 Identities=18% Similarity=0.235 Sum_probs=147.3
Q ss_pred EEEEeCCccchHHHHHHhhcCCCeEEEEEecCCC-------chhhhhcCCC---hHH-----------HHHH-hhhCCEE
Q 004411 193 YVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP-------SSEIYRTLPV---RDE-----------ILKS-LLNSDLI 250 (755)
Q Consensus 193 iVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP-------~~e~~r~lp~---~~~-----------il~~-ll~~Dli 250 (755)
+.+.|.|..-+-.-++|++.|++.-+|+.|-.-+ ..++|..|+. .++ |-++ -..||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 5566887766666689999999999999996433 1233444441 111 1111 1223332
Q ss_pred EEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC----chhHHHHHHH-HHHc--
Q 004411 251 GFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL----DVTGQKVKEL-KEKF-- 323 (755)
Q Consensus 251 gf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~----~~~~~~~~~l-r~~~-- 323 (755)
-.-+.--++ -|..+| +|..- .|.|||+|.+.|...-.- ...++++.++ +..+
T Consensus 226 TTVSeITa~----Ea~~LL----------------~r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g 284 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLL----------------KRKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYG 284 (633)
T ss_dssp EESSHHHHH----HHHHHH----------------SS--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred eehhhhHHH----HHHHHh----------------CCCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222111000 111122 22221 257999999987653110 1123334443 3333
Q ss_pred -----CCceEEEE-ecccc-ccCChHHHHHHHHHHHHh--CCCCCCcEEEEEEecCCCCCchh---------HHHHHHHH
Q 004411 324 -----DGKIVILG-VDDMD-LFKGISLKFLAMGQLLEQ--HPDLRGKVVLVQITNPARSSGKD---------VQDLLSDT 385 (755)
Q Consensus 324 -----~~~~vil~-VdRld-~~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~---------~~~l~~~i 385 (755)
.+++++++ .||.+ ..||++..|+|+.+|-.. .-.. +.-|+..|-.|+....-. +.++++.+
T Consensus 285 ~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~-~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~ 363 (633)
T PF05693_consen 285 HYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS-DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTV 363 (633)
T ss_dssp ---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT--S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC-CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHH
Confidence 14666666 59999 589999999999987431 1111 222333344465443111 12222222
Q ss_pred HHHHHHHhcc---------------------------------------------------------------cCCCCCc
Q 004411 386 NRIAEEINLN---------------------------------------------------------------FGKPGYE 402 (755)
Q Consensus 386 ~~lv~~In~~---------------------------------------------------------------~g~~~~~ 402 (755)
.++.++|..+ -...+-.
T Consensus 364 ~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drV 443 (633)
T PF05693_consen 364 DEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRV 443 (633)
T ss_dssp HHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SE
T ss_pred HHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCce
Confidence 2222222111 0011122
Q ss_pred cEEEecCCCC------hhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC
Q 004411 403 PIVIIKEPLS------TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (755)
Q Consensus 403 pV~~~~~~v~------~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (755)
.|+|....++ .-++..+.+.+|++|+||++|+.|.+|+|++|.+. |-|.|..+
T Consensus 444 KVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gV---------------------PsITTnLs 502 (633)
T PF05693_consen 444 KVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGV---------------------PSITTNLS 502 (633)
T ss_dssp EEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT-----------------------EEEETTB
T ss_pred EEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCC---------------------ceeeccch
Confidence 4665544443 23788899999999999999999999999999864 78999999
Q ss_pred Cccccc--------CCcEE-eCC--CCH----HHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 477 GCSPSL--------SGAIR-VNP--WNV----DAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 477 G~~~~l--------~~ai~-VnP--~d~----~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
|...-+ ..|+. |+- .|. +++|+.|.....++..+|.....+..+.-..-+|.+-...|.+.-
T Consensus 503 GFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 503 GFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp HHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHH
T ss_pred hHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 976433 12554 433 233 566667777788887776665444444334456666555555443
No 131
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.76 E-value=6.4e-07 Score=103.26 Aligned_cols=238 Identities=13% Similarity=0.090 Sum_probs=154.2
Q ss_pred CCCEEE--EeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCC--hHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 190 DEDYVW--IHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV--RDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 190 ~~DiVw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~--~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
++|++. .+.-|... +....|.-++.+..|+ -+. |. -+..+..+-.+|.+..-|.+-.+....
T Consensus 224 ~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~-- 289 (519)
T TIGR03713 224 DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYESLSRADLIIVDREDIERLLEE-- 289 (519)
T ss_pred CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhChhhcCeEEEcCHHHHHHHHH--
Confidence 357777 56666655 3333444445556665 211 21 245566677778777666543333321
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
++ +- .. ...+|..+|++.= +.... ..++..++.|.+++||| +.|-+...|
T Consensus 290 -~~-~~------------~~-~~~~v~~Ip~~~~--~~~~~------------~s~r~~~~~I~v~idrL-~ek~~~~~I 339 (519)
T TIGR03713 290 -NY-RE------------NY-VEFDISRITPFDT--RLRLG------------QSQQLYETEIGFWIDGL-SDEELQQIL 339 (519)
T ss_pred -Hh-hh------------cc-cCCcceeeCccce--EEecC------------hhhcccceEEEEEcCCC-ChHHHHHHH
Confidence 11 10 00 1234445676633 11110 11233567777778899 999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC-C------------------c---c
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG-Y------------------E---P 403 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~-~------------------~---p 403 (755)
+|+.++++++|+.. |.+.|... . .++.+.++++++++|..++... + . .
T Consensus 340 ~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (519)
T TIGR03713 340 QQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKE 409 (519)
T ss_pred HHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhccccc
Confidence 99999999999977 77666431 1 2335566777777766532210 0 0 1
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
.+.+.+..+..++.+.|.-|.++|.+|..|||+ ..+||++.|. |.| .-|.++.+.
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi---------------------PqI---nyg~~~~V~ 464 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI---------------------PQI---NKVETDYVE 464 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC---------------------Cee---ecCCceeeE
Confidence 344556666779999999999999999999999 9999999864 555 667777773
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCH
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQMEN 508 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~ 508 (755)
+|++| .|..++++||...|+.+.
T Consensus 465 d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 465 HNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred cCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 69999 699999999999999764
No 132
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.69 E-value=1.6e-06 Score=103.23 Aligned_cols=181 Identities=9% Similarity=0.050 Sum_probs=115.7
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 327 IVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 327 ~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
.+|.++.|+..-||..+++..+++|.+ .+|+ ..+.+|..|.....+. .-+++.+.+.++++. -++. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC--cCCC--C--cE
Confidence 478889999999999999999999865 3454 2477777664332221 123455555555541 0221 1 47
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCC--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
+|+. ..+-.--..++..|||++.||. .|.-|+.-+-||.- |.|-+|..-|.-.+-
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N----------------------G~LnlSvlDGww~E~ 606 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN----------------------GGLNLSVLDGWWDEG 606 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc----------------------CCeeeecccCccccc
Confidence 8775 4555556679999999999999 77777766665553 578888887765444
Q ss_pred -C--CcEEeCC------------CCHHHHHHHHHHHhc----CC-----HHHHHHHHHH-HhhHhhhcCHHHHHHHHHHH
Q 004411 483 -S--GAIRVNP------------WNVDAVADAMDSALQ----ME-----NQEKILRHEK-HYKYISSHDVAYWAKSIDQD 537 (755)
Q Consensus 483 -~--~ai~VnP------------~d~~~~A~ai~~aL~----m~-----~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~ 537 (755)
. +|..+.+ .|.+++-+.|.+.+- .. +.+...+++. +....-.+++.+-++.|++.
T Consensus 607 ~~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 607 YDGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred cCCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 2 5888888 555666666654433 10 1233333333 23333457888888888877
Q ss_pred HH
Q 004411 538 LE 539 (755)
Q Consensus 538 l~ 539 (755)
+-
T Consensus 687 ~Y 688 (778)
T cd04299 687 FY 688 (778)
T ss_pred hH
Confidence 65
No 133
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.44 E-value=1.7e-05 Score=88.65 Aligned_cols=134 Identities=17% Similarity=0.116 Sum_probs=83.6
Q ss_pred CceEEE--Eeccccc-cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 325 GKIVIL--GVDDMDL-FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 325 ~~~vil--~VdRld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
++++|+ +.+|..+ .|+++.+++|++.+.+++|+++ +++.+.+ +... ..++++.... +. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~----~~~~----~~~~~~~~~~----~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVN----FKRR----LQFEQIKAEY----GP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCC----chhH----HHHHHHHHHh----CC-CC
Confidence 555553 4469887 7999999999999999899876 5443322 1111 1223333322 21 11
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe--------
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-------- 473 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-------- 473 (755)
.|.++.+ +...+|++||++|.+| |.+.+|+|+||. |+|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~---------------------P~Vv~yk~~pl~~ 300 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT---------------------PMVVGYRMKPLTF 300 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC---------------------CEEEEEcCCHHHH
Confidence 3554432 3567999999999999 666779999976 34443
Q ss_pred ---------CCCCcccccCC-c----EEeCCCCHHHHHHHHHHHhcCC
Q 004411 474 ---------EFIGCSPSLSG-A----IRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 474 ---------e~~G~~~~l~~-a----i~VnP~d~~~~A~ai~~aL~m~ 507 (755)
.+.+....+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 301 ~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 301 LIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 12333333321 1 2224457889999999999877
No 134
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.26 E-value=3.4e-06 Score=83.60 Aligned_cols=72 Identities=24% Similarity=0.300 Sum_probs=57.4
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC--CCCceEEcCCceEEEec
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG--VEKLGLSAEHGYFTRWS 659 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~--i~~l~liaenGa~i~~~ 659 (755)
...++||+|+||||+|.. .. .+....+|.+|.+ .|..|+.+|..+...+..+-.. ++.+++|||||+.|+.+
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye---~~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p 78 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YE---WQPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLP 78 (274)
T ss_pred ccceEEEEcccCcccCCC-CC---CCccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEec
Confidence 357899999999999932 22 3456677888885 6999999999999987666554 46688999999999987
No 135
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.24 E-value=0.00052 Score=75.36 Aligned_cols=301 Identities=16% Similarity=0.235 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCc----cchHHHH--HHhhcCCCeEEEEEecCC---------CchhhhhcCCCh
Q 004411 173 LSANKVFADKVMEVINPDEDYVWIHDYH----LMVLPSF--LRKRFHRVKVGFFLHSPF---------PSSEIYRTLPVR 237 (755)
Q Consensus 173 ~~vN~~fa~~i~~~~~~~~DiVwvhDyh----l~llp~~--lr~~~~~~~i~~flH~Pf---------P~~e~~r~lp~~ 237 (755)
.+.+++|+- ......|++..||+|--. ...+|-. +|+++|+.++..+--+|- +..-.-+.+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 456667761 123334667899999765 3345544 899999999998876652 222122335543
Q ss_pred H-HHHHHh---hhCCEEEEeCHHHHHHHHHHHhhHhCccccccCce----------------------eE----------
Q 004411 238 D-EILKSL---LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGY----------------------IG---------- 281 (755)
Q Consensus 238 ~-~il~~l---l~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~----------------------~~---------- 281 (755)
. ..++.. ...|++.|...+.=-|++..|.+. |+..---++. +.
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHH
Confidence 2 222333 345777666666666666666432 2211000000 00
Q ss_pred ---EEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCChHHHHHHHHHHHHhCCC
Q 004411 282 ---LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357 (755)
Q Consensus 282 ---i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~ 357 (755)
...+.+. |.+.. +...... ..+........+|.+.++ +++++..+.- ..--...+.|+..+++++|+
T Consensus 190 ~Rf~~LGa~~--v~v~G---NlKfd~~--~~~~~~~~~~~~r~~l~~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~ 260 (419)
T COG1519 190 QRFRSLGAKP--VVVTG---NLKFDIE--PPPQLAAELAALRRQLGGHRPVWVAASTH--EGEEEIILDAHQALKKQFPN 260 (419)
T ss_pred HHHHhcCCcc--eEEec---ceeecCC--CChhhHHHHHHHHHhcCCCCceEEEecCC--CchHHHHHHHHHHHHhhCCC
Confidence 0111121 11111 1111111 123344566778888876 8899888882 22333477899999999998
Q ss_pred CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC-------CCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-------GYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 358 ~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~-------~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
.. || ++ | +.++. -..+.+++.+.|-+++.- ..++|.+.. +.-|+..+|++||++.|--
T Consensus 261 ~l----lI-lV-P---RHpER---f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVGG 325 (419)
T COG1519 261 LL----LI-LV-P---RHPER---FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVGG 325 (419)
T ss_pred ce----EE-Ee-c---CChhh---HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEECC
Confidence 64 43 33 4 33432 356778888877665321 122454333 4779999999999987644
Q ss_pred -C--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe----CCCCccccc---CCcEEeCCCCHHHHHHHH
Q 004411 431 -V--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS----EFIGCSPSL---SGAIRVNPWNVDAVADAM 500 (755)
Q Consensus 431 -~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~ai~VnP~d~~~~A~ai 500 (755)
+ .-|-| ++|+.+|+. |+|.- .|.-+.+.+ ++++.|+. .+.+++++
T Consensus 326 Slv~~GGHN--~LEpa~~~~---------------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v 380 (419)
T COG1519 326 SLVPIGGHN--PLEPAAFGT---------------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAV 380 (419)
T ss_pred cccCCCCCC--hhhHHHcCC---------------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHH
Confidence 3 23444 579999864 45543 333344444 24677874 88888888
Q ss_pred HHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 501 DSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
...++. +++|..+.++..+.|.++
T Consensus 381 ~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 381 ELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 888876 667888888888888766
No 136
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.24 E-value=1.8e-06 Score=84.01 Aligned_cols=71 Identities=13% Similarity=0.174 Sum_probs=56.0
Q ss_pred EEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhH---HhhhcC-------CCCceE
Q 004411 587 LILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL---GNWFSG-------VEKLGL 648 (755)
Q Consensus 587 lI~lD~DGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L---~~~f~~-------i~~l~l 648 (755)
+|++|+||||+.... .....++.+.+++++|.+ .|+.|+++|||+.... ++|+.. +|.-++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 589999999998420 014778999999999997 5999999999998876 477755 344578
Q ss_pred EcCCceEEEe
Q 004411 649 SAEHGYFTRW 658 (755)
Q Consensus 649 iaenGa~i~~ 658 (755)
++.||+++..
T Consensus 80 i~~~g~~~~~ 89 (157)
T smart00775 80 LLSPDRLFAA 89 (157)
T ss_pred EEcCCcchhh
Confidence 8999998854
No 137
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.14 E-value=4.9e-06 Score=73.07 Aligned_cols=87 Identities=16% Similarity=0.172 Sum_probs=71.4
Q ss_pred EEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C--cEEeCCCCHHHHHHHHH
Q 004411 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMD 501 (755)
Q Consensus 425 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~VnP~d~~~~A~ai~ 501 (755)
+++.|+..+|+++..+|+||||. |+|.+...++...+. + ++.++ |++++++++.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~---------------------~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~ 57 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGT---------------------PVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE 57 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCC---------------------eEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH
Confidence 46778888999999999999963 667666777777773 3 67777 9999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 535 (755)
.+++.| ++++...++++++|. .|++.+=++.++
T Consensus 58 ~ll~~~-~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 58 YLLENP-EERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHCCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999965 578888888999997 688887777765
No 138
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=97.94 E-value=0.00013 Score=71.46 Aligned_cols=166 Identities=20% Similarity=0.270 Sum_probs=109.9
Q ss_pred HhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC-C-CCc-eEEcCCceE
Q 004411 579 AYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V-EKL-GLSAEHGYF 655 (755)
Q Consensus 579 ~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~-i-~~l-~liaenGa~ 655 (755)
++++-..-|+.+|.||||++ .....++++.+.|++|.. +.++-++-|-.++-+.+.++. + ... +..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 34455566999999999998 567889999999999885 678889999999988888853 2 222 466999987
Q ss_pred EEecCCCceeEcccCcCccHH--HHHHHHHH---HHh-----cCCCCcEEeecceEEEEEe--ccCCCC----cc-----
Q 004411 656 TRWSKNSAWEICSLTRDFDWK--EIAEPVMK---LYT-----ETTDGSFIEDKETAIVWHH--QHADPH----FG----- 714 (755)
Q Consensus 656 i~~~~~~~w~~~~~~~~~~w~--~~v~~i~~---~y~-----~~t~gs~iE~k~~~l~~hy--r~ad~~----~~----- 714 (755)
-+..+.. .. . ..-..|. +.++++++ .|. ....|.+||-+.-.+...- |++..+ |.
T Consensus 80 ~yk~gk~-~~--~-Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk 155 (252)
T KOG3189|consen 80 AYKGGKL-LS--K-QSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKK 155 (252)
T ss_pred EeeCCcc-hh--H-HHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhh
Confidence 7665322 11 0 0112332 33333332 222 2356999997665554332 344211 21
Q ss_pred hhhHHHHHHHHHHHhcCCCeEE-EecCeEEEEEeCCCCCC
Q 004411 715 SCQAKELLDHLENVLANEPVVV-KRGQHIVEVKPQVCQHQ 753 (755)
Q Consensus 715 ~~qa~el~~~L~~~l~~~~~~V-~sG~~~VEV~p~gvnKG 753 (755)
...-..+++.|++.+++..+.. +-|+-.+||-|.|++|-
T Consensus 156 ~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKt 195 (252)
T KOG3189|consen 156 HKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKT 195 (252)
T ss_pred hhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchh
Confidence 1122357888999999888775 47899999999999984
No 139
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.87 E-value=0.00015 Score=82.01 Aligned_cols=122 Identities=11% Similarity=0.084 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
...|+|++++.++.|++. |=+ |..+ . ....+.++ .+ |. .|+.+.+ +...++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y~-----nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----YD-----NVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----cC-----CcEEECC-cChHHHHHHHH
Confidence 899999999999999987 654 5432 1 11344444 22 22 3665654 45567999999
Q ss_pred hCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCC-CCcccccCCcEEeCCCCHHHHHHHH
Q 004411 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSLSGAIRVNPWNVDAVADAM 500 (755)
Q Consensus 422 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~~ai~VnP~d~~~~A~ai 500 (755)
.||+++.+|..||+++...||+..|. |++.=+. .|..+.+..|.++++.|+++|+++|
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~---------------------pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i 405 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNL---------------------LILGFEETAHNRDFIASENIFEHNEVDQLISKL 405 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCC---------------------cEEEEecccCCcccccCCceecCCCHHHHHHHH
Confidence 99999999999999999999999753 5555444 4555555678999999999999999
Q ss_pred HHHhcCCH
Q 004411 501 DSALQMEN 508 (755)
Q Consensus 501 ~~aL~m~~ 508 (755)
.++|+.+.
T Consensus 406 ~~lL~d~~ 413 (438)
T TIGR02919 406 KDLLNDPN 413 (438)
T ss_pred HHHhcCHH
Confidence 99999874
No 140
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.84 E-value=2.5e-05 Score=72.76 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=41.0
Q ss_pred eEEEecCCCcCCCCCC---CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHH
Q 004411 586 RLILLDYDGTVMPQTS---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~---~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~ 637 (755)
|+|++|+||||+.... ....+.++++++|++|.+ .+..++++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987421 113477999999999986 48999999999987654
No 141
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.64 E-value=0.0005 Score=69.36 Aligned_cols=142 Identities=16% Similarity=0.255 Sum_probs=89.7
Q ss_pred HHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc-C-C-CCc-eEEcCCceEEEecCCCceeEccc-CcC-ccHHHHHHHHH
Q 004411 610 VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS-G-V-EKL-GLSAEHGYFTRWSKNSAWEICSL-TRD-FDWKEIAEPVM 683 (755)
Q Consensus 610 ~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~-~-i-~~l-~liaenGa~i~~~~~~~w~~~~~-~~~-~~w~~~v~~i~ 683 (755)
+.++|++|.+ +..|.||||-.+...++.+. . + .+. .+.+|||...+..++..|...+. ... ...++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899996 78999999999999888884 2 2 222 58899999888776666754321 000 11122333333
Q ss_pred HHHh----cCCCCcEEeecceEEEEEe--ccCCCC----cc----hhhH-HHHHHHHHHHhcCCCeEEE-ecCeEEEEEe
Q 004411 684 KLYT----ETTDGSFIEDKETAIVWHH--QHADPH----FG----SCQA-KELLDHLENVLANEPVVVK-RGQHIVEVKP 747 (755)
Q Consensus 684 ~~y~----~~t~gs~iE~k~~~l~~hy--r~ad~~----~~----~~qa-~el~~~L~~~l~~~~~~V~-sG~~~VEV~p 747 (755)
.+.. ....|.+||.+...|.+.- |+|..+ |. .... +.+++.|++.+++..+.+. -|...|||.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 3322 1346999999999998875 444211 21 1112 2588889999998888875 7899999999
Q ss_pred CCCCCC
Q 004411 748 QVCQHQ 753 (755)
Q Consensus 748 ~gvnKG 753 (755)
+|++|.
T Consensus 159 ~GwDKt 164 (220)
T PF03332_consen 159 KGWDKT 164 (220)
T ss_dssp TT-SGG
T ss_pred CCccHH
Confidence 999996
No 142
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.51 E-value=0.00018 Score=75.84 Aligned_cols=73 Identities=15% Similarity=0.220 Sum_probs=55.3
Q ss_pred CceEEEecCCCcCCCCCCCCCCC-CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CC-ceEEcCCceEEEe
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRP-STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTRW 658 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p-~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~-l~liaenGa~i~~ 658 (755)
..++|++||||||++.. ....+ ++.+.++|++|.+ .|..++|+|++++....+.+... .+ ...|..+|...+.
T Consensus 125 ~~kvIvFDLDgTLi~~~-~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~ 201 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDE-EPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEE 201 (301)
T ss_pred cceEEEEecCCCCcCCC-CccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccC
Confidence 46899999999999853 11112 5999999999997 48899999999999888777654 22 2467777777654
No 143
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.33 E-value=0.00023 Score=65.75 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=53.3
Q ss_pred EEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC----CceEEcCCceEEE
Q 004411 587 LILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTR 657 (755)
Q Consensus 587 lI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~----~l~liaenGa~i~ 657 (755)
+++||+||||.+..+ ....+.+.+.+.|++|+++ +..++|+||+....++.++..+. --.+++.++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 589999999998643 1236788999999999975 78999999999999999987542 1135555655443
No 144
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.06 E-value=0.001 Score=70.31 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=52.6
Q ss_pred CceEEEecCCCcCCCCCCCCCCC---CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CC-ceEEcCCceEEE
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRP---STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTR 657 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p---~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~-l~liaenGa~i~ 657 (755)
..++|++||||||++. ...+ ++.+.++|++|.+ .|..++|+|+.+...+...+... +. ...|..+|....
T Consensus 127 ~~~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccCC---CCccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 4589999999999985 3333 5899999999997 58899999988888777777643 22 234555665554
Q ss_pred e
Q 004411 658 W 658 (755)
Q Consensus 658 ~ 658 (755)
.
T Consensus 203 k 203 (303)
T PHA03398 203 E 203 (303)
T ss_pred c
Confidence 3
No 145
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.67 E-value=0.0029 Score=59.35 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=42.0
Q ss_pred eEEEecCCCcCCCCCC--CCC-------CCCHHHHHHHHHHhcCCCCcEEEEcCC-ChhhHHhhhc
Q 004411 586 RLILLDYDGTVMPQTS--EDK-------RPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWFS 641 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~--~~~-------~p~~~~~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~f~ 641 (755)
|+|++|+||||++..- ... .+-+.+.++|+.|.+ .+..++|+|++ ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998521 111 246799999999986 48899999999 6766655554
No 146
>PRK10444 UMP phosphatase; Provisional
Probab=96.65 E-value=0.0012 Score=69.37 Aligned_cols=54 Identities=9% Similarity=0.173 Sum_probs=44.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+|++++|+||||... + .+.+...++|++|.+ .+..++++|||+....+.+...+
T Consensus 1 ~~~v~~DlDGtL~~~---~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHD---N-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeC---C-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 478999999999973 3 567899999999997 48999999999987665555443
No 147
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.64 E-value=0.0011 Score=69.88 Aligned_cols=49 Identities=18% Similarity=0.205 Sum_probs=39.3
Q ss_pred eEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004411 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (755)
|+|++|+||||.........+.+.+.++|++|.+. |..++++|||+...
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 78999999999974211123677999999999974 89999999988775
No 148
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.63 E-value=0.0018 Score=67.92 Aligned_cols=65 Identities=17% Similarity=0.245 Sum_probs=48.1
Q ss_pred eEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHHhhhcCCC-Cc---eEEcCCceE
Q 004411 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSGVE-KL---GLSAEHGYF 655 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~f~~i~-~l---~liaenGa~ 655 (755)
|+|++|+||||.+. +... +.+.++|++|.+ .+..|+++|| |+...+.+.+..+. ++ .+++.+|+.
T Consensus 2 ~~~~~D~DGtl~~~---~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~ 73 (249)
T TIGR01457 2 KGYLIDLDGTMYKG---KERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMAT 73 (249)
T ss_pred CEEEEeCCCceEcC---CeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHH
Confidence 68999999999983 3333 478999999997 4899999995 88888888776431 11 255666653
No 149
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.57 E-value=0.0028 Score=59.38 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=44.7
Q ss_pred eEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC--------hhhHHhhhcCC
Q 004411 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG--------KDSLGNWFSGV 643 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~--------~~~L~~~f~~i 643 (755)
|+|++|+||||++... ....+.+.+.++|+.|.+ .+..++|+|+++ ...+++.+..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999995211 124567899999999986 489999999999 67777777654
No 150
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.49 E-value=0.0016 Score=69.50 Aligned_cols=50 Identities=18% Similarity=0.335 Sum_probs=38.7
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (755)
.++|++|+||||.+. . .+-+.+.++|++|.+ .+..++++|||+......+
T Consensus 2 ~~~~~~D~DGtl~~~---~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~ 51 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG---E-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEY 51 (279)
T ss_pred ccEEEEeCCCceEcC---C-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHH
Confidence 579999999999873 2 244568999999996 4889999999875544443
No 151
>PLN02645 phosphoglycolate phosphatase
Probab=96.38 E-value=0.002 Score=69.86 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=42.4
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.++|++|+||||... + .+-+...++|++|.+ .+..++++|+|+....+..+.
T Consensus 27 ~~~~~~~D~DGtl~~~---~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~ 79 (311)
T PLN02645 27 SVETFIFDCDGVIWKG---D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGK 79 (311)
T ss_pred hCCEEEEeCcCCeEeC---C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHH
Confidence 4789999999999983 3 345778999999997 489999999999666555553
No 152
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.33 E-value=0.0011 Score=64.22 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=40.6
Q ss_pred ceEEEecCCCcCCCCCC----CCCCCCHH-HH--HHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 585 SRLILLDYDGTVMPQTS----EDKRPSTE-VL--SILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~----~~~~p~~~-~~--~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.|++++|+||||++... ....+..- +. .+|++|.+ .+..++|+||++...+...+..+
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~~i~~Lk~-~G~~i~IvTn~~~~~~~~~l~~~ 65 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGYGIRCALK-SGIEVAIITGRKAKLVEDRCKTL 65 (154)
T ss_pred CeEEEEeCceeEEcCeEEECCCCcEEEEEechhHHHHHHHHH-CCCEEEEEECCCCHHHHHHHHHc
Confidence 48999999999998321 11111110 10 27888886 48999999999999888888654
No 153
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.32 E-value=0.0023 Score=63.90 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=42.1
Q ss_pred CceEEEecCCCcCCCCC----CCCCCCCHHHH---HHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 584 NSRLILLDYDGTVMPQT----SEDKRPSTEVL---SILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~----~~~~~p~~~~~---~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+|+|++|+||||++.. ........... ..++.|.+ .+..++|+|||+...+.+.+..+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 68999999999999741 11222222222 46777775 58899999999999988887754
No 154
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.25 E-value=0.36 Score=53.62 Aligned_cols=258 Identities=20% Similarity=0.232 Sum_probs=133.0
Q ss_pred HHHHHHHHhCCCCCEEEEeCCcc--chHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHH
Q 004411 179 FADKVMEVINPDEDYVWIHDYHL--MVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFD 256 (755)
Q Consensus 179 fa~~i~~~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~ 256 (755)
..+.+.+ .+| |+|..=||.- +.+...+|++.+..|+.++. ++.+|.==++|-..++.....=++.| .
T Consensus 74 ~~~~~~~-~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---P 142 (373)
T PF02684_consen 74 LVERIKE-EKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---P 142 (373)
T ss_pred HHHHHHH-cCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---c
Confidence 3334433 255 7888888863 46788999999888887653 34454333556555554422211222 1
Q ss_pred HHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEE--e
Q 004411 257 YARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILG--V 332 (755)
Q Consensus 257 ~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~--V 332 (755)
+-..|.. +.| +-..|-|+. =+|.-... .. ....++++ .++++|.- =
T Consensus 143 FE~~~y~------------~~g-~~~~~VGHP--------l~d~~~~~-----~~----~~~~~~~~l~~~~~iIaLLPG 192 (373)
T PF02684_consen 143 FEPEFYK------------KHG-VPVTYVGHP--------LLDEVKPE-----PD----RAEAREKLLDPDKPIIALLPG 192 (373)
T ss_pred ccHHHHh------------ccC-CCeEEECCc--------chhhhccC-----CC----HHHHHHhcCCCCCcEEEEeCC
Confidence 1122221 111 112333432 22211111 11 11223332 34444333 3
Q ss_pred ccccccC-ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC
Q 004411 333 DDMDLFK-GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (755)
Q Consensus 333 dRld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v 411 (755)
+|-...| .++..++|++++.+++|+++ ++....+. .. ...+.+.....+.. .++..+
T Consensus 193 SR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~~~~------~~~~~~---- 250 (373)
T PF02684_consen 193 SRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEYPPD------VSIVII---- 250 (373)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhhCCC------CeEEEc----
Confidence 6665544 45888999999999999987 55443321 11 12233333222111 023322
Q ss_pred ChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCC-----cE
Q 004411 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG-----AI 486 (755)
Q Consensus 412 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----ai 486 (755)
..+...+++.||+.+++| |.+-+|++..+.+....=...-..-- -...+|-..+.|..-.+-| =+
T Consensus 251 -~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~----iak~lvk~~~isL~Niia~~~v~PEl 320 (373)
T PF02684_consen 251 -EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYF----IAKRLVKVKYISLPNIIAGREVVPEL 320 (373)
T ss_pred -CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHH----HHHHhhcCCEeechhhhcCCCcchhh
Confidence 346788999999999999 88999999987631000000000000 0011223555555544422 13
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHH
Q 004411 487 RVNPWNVDAVADAMDSALQMENQ 509 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~ 509 (755)
+-+-.+++.+++++...|..++.
T Consensus 321 iQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 321 IQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred hcccCCHHHHHHHHHHHhcCHHH
Confidence 45567899999999999987653
No 155
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.12 E-value=0.013 Score=61.02 Aligned_cols=63 Identities=19% Similarity=0.316 Sum_probs=47.0
Q ss_pred ccccChHHHHHHhhccCceEEEecCCCcCCCCCC---CC-C---------------------------CCCHHHHHHHHH
Q 004411 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS---ED-K---------------------------RPSTEVLSILND 616 (755)
Q Consensus 568 f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~---~~-~---------------------------~p~~~~~~~L~~ 616 (755)
..=.++++|.+.....+.-.|+||+||||++..+ .. . .|-+.+.++|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 3347788999888876666999999999997554 11 1 111227888999
Q ss_pred HhcCCCCcEEEEcCC
Q 004411 617 LCNDPKNAVFIVSGR 631 (755)
Q Consensus 617 L~~d~~~~V~IvSGR 631 (755)
|.+ .|.+++|+|+|
T Consensus 126 l~~-~G~~i~iVTnr 139 (237)
T TIGR01672 126 HQR-RGDAIFFVTGR 139 (237)
T ss_pred HHH-CCCEEEEEeCC
Confidence 986 48999999999
No 156
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.00 E-value=0.21 Score=53.58 Aligned_cols=169 Identities=12% Similarity=0.131 Sum_probs=109.6
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHh---CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQ---HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~---~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
...++++--...+...+.-++.|.+.+-++ .+.---++ |.+|++ .||..+.+.++|++. .|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciITG----KGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIITG----KGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEcC----CCchhHHHHHHHHHh-----------cc
Confidence 346788888899999999999999855221 11111122 444553 577777777776654 46
Q ss_pred ccEEEecCCCChhhHHHHHHhCcE--EEEcCCCcCCCcc--ceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAEC--CVVNCVRDGMNLV--PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv--~vvtS~~EG~nLv--~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (755)
+.|.+.+--++-++++.++..||. |+=||. -|.-|. +...--|+. |+++-.|.-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcgl---------------------PvcA~~fkc 375 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCGL---------------------PVCAVNFKC 375 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCCC---------------------ceeeecchh
Confidence 678888888999999999999994 566663 454444 334444432 666667765
Q ss_pred ccccc---CCcEEeCCCCHHHHHHHHHHHhcCC---HHHHHHHHHHHhhHhhhcCHHHHHHHHHHH
Q 004411 478 CSPSL---SGAIRVNPWNVDAVADAMDSALQME---NQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (755)
Q Consensus 478 ~~~~l---~~ai~VnP~d~~~~A~ai~~aL~m~---~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (755)
..+.+ .+|++++ |.+++|+.|..+++.- ..+-. +.++-+++..-.+|.++.-+.
T Consensus 376 l~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 376 LDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHh
Confidence 55555 2699998 8999999999998832 22221 334444444557777755443
No 157
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.99 E-value=0.023 Score=54.88 Aligned_cols=66 Identities=17% Similarity=0.244 Sum_probs=55.1
Q ss_pred hhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEE
Q 004411 580 YNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (755)
Q Consensus 580 y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~li 649 (755)
.++...|-|++|+|.||++.. +...++++++.+..+.+ .+..|+|+|-.....+..+...+ ++.+|
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l-~v~fi 88 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKL-GVPFI 88 (175)
T ss_pred HHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhc-CCcee
Confidence 345588999999999999974 56678999999999997 59999999999999999888765 24443
No 158
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.97 E-value=0.033 Score=58.29 Aligned_cols=86 Identities=21% Similarity=0.460 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCC---CCCEEEEeCCccchHHHHHHhhcC------CCeEEEEEecC-CCc---hhhhh--cCCCh-----
Q 004411 178 VFADKVMEVINP---DEDYVWIHDYHLMVLPSFLRKRFH------RVKVGFFLHSP-FPS---SEIYR--TLPVR----- 237 (755)
Q Consensus 178 ~fa~~i~~~~~~---~~DiVwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-fP~---~e~~r--~lp~~----- 237 (755)
.|+.++++.++. .-|+||+||+|..++|.+||.... ++++.|++|.. |-. .+.+. .+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~ 197 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL 197 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc
Confidence 455555555432 349999999999999999999753 59999999964 221 12222 12321
Q ss_pred ---------HHHHHHhhhCCEEEEeCHHHHHHHHH
Q 004411 238 ---------DEILKSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 238 ---------~~il~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
..+-.|+..||.|..-++.|++.-++
T Consensus 198 ~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 198 DEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred cccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 13446789999999999999877654
No 159
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.95 E-value=0.0097 Score=58.46 Aligned_cols=49 Identities=20% Similarity=0.297 Sum_probs=36.6
Q ss_pred CceEEEecCCCcCCCCCCCCC---------CCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 584 NSRLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~---------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
+.|++++|+||||+...+... .+-+.+.++|++|.+ .+..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 468999999999997432111 134779999999986 4899999996554
No 160
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=95.25 E-value=0.064 Score=51.52 Aligned_cols=98 Identities=16% Similarity=0.286 Sum_probs=49.3
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChH-----HHHHH-hhhCCEEEEeCH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD-----EILKS-LLNSDLIGFHTF 255 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~-----~il~~-ll~~Dligf~t~ 255 (755)
++++..++ |+|++|.++...+...... ++++.+++|.+++.........+.. .+.+. .-.+|.+..-+.
T Consensus 74 ~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 74 RLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSH
T ss_pred HHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECH
Confidence 33444455 8999999887755433322 8899999998874211111111111 11112 245788877776
Q ss_pred HHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCccccc
Q 004411 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFE 304 (755)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~ 304 (755)
.-++.+.+ .|++ ..+|.++|+|||+++|+
T Consensus 149 ~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 149 STKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 65555543 2321 24788999999999884
No 161
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.93 E-value=1.2 Score=48.96 Aligned_cols=275 Identities=15% Similarity=0.148 Sum_probs=141.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCc--cchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh
Q 004411 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH--LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL 244 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyh--l~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l 244 (755)
..|..|.+. ++.+.+. +| |++..=|+. -..+...+|+.+|++||.++. -| .+|.==|.|-..+..
T Consensus 69 ~llk~~~~~----~~~i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV---~P--sVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRREL----VRYILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV---SP--SVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHH----HHHHHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE---Cc--ceeeechhhHHHHHH-
Confidence 456666543 2333332 45 777776764 236778999999999998754 23 344222444333222
Q ss_pred hhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-
Q 004411 245 LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF- 323 (755)
Q Consensus 245 l~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~- 323 (755)
.+|++.---+... .|.. + .|+. ..|-|+ +=.|.-.+.+ .....|+++
T Consensus 136 -~~D~lLailPFE~-~~y~---k-~g~~---------~~yVGH--------pl~d~i~~~~---------~r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFEP-AFYD---K-FGLP---------CTYVGH--------PLADEIPLLP---------DREAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCCH-HHHH---h-cCCC---------eEEeCC--------hhhhhccccc---------cHHHHHHHhC
Confidence 2354432111111 1211 0 1111 223333 1122221221 112355555
Q ss_pred ---CCceEEEEe-cc-ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004411 324 ---DGKIVILGV-DD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (755)
Q Consensus 324 ---~~~~vil~V-dR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~ 398 (755)
..+.+.+-- +| -+-..-.+..++|++++.+++|+++ ++.=..+ ..++.++. +....-..
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~---~~~~~~~~---- 247 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIE---EALKWEVA---- 247 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHH---HHhhcccc----
Confidence 334444443 33 4556667888899999999999987 4432221 23333222 22211100
Q ss_pred CCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE------
Q 004411 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV------ 472 (755)
Q Consensus 399 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~------ 472 (755)
.+..+ +...+....+.+||+.+..| |.+.+|++.|+.+ ++|.
T Consensus 248 ---~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P--------------------~Vv~Yk~~~i 295 (381)
T COG0763 248 ---GLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTP--------------------MVVAYKVKPI 295 (381)
T ss_pred ---CceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC--------------------EEEEEeccHH
Confidence 01121 23457888999999999998 8999999999762 2232
Q ss_pred ----------eCCCCcccccCCcEEe-----CCCCHHHHHHHHHHHhcCCH--HHHHHHHHHHhhHhhhcCHHHHHHHH
Q 004411 473 ----------SEFIGCSPSLSGAIRV-----NPWNVDAVADAMDSALQMEN--QEKILRHEKHYKYISSHDVAYWAKSI 534 (755)
Q Consensus 473 ----------Se~~G~~~~l~~ai~V-----nP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (755)
..+.+....+-|-.+| .-..++.+|.++...+..+. ++..+....+++++.+..+..=+.+.
T Consensus 296 t~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~ 374 (381)
T COG0763 296 TYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQA 374 (381)
T ss_pred HHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 2233322222221111 12347899999999998762 12333444566666655344444333
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.83 E-value=0.0093 Score=53.52 Aligned_cols=49 Identities=18% Similarity=0.344 Sum_probs=35.9
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
|++|+||||.. ...+-+...++|++|.+. +..++++|-++...-+.+..
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~~-g~~~~~lTNns~~s~~~~~~ 49 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRER-GKPVVFLTNNSSRSREEYAK 49 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHHT-TSEEEEEES-SSS-HHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHH
Confidence 68999999997 344567889999999974 78899999877555444443
No 163
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.41 E-value=0.036 Score=53.12 Aligned_cols=46 Identities=22% Similarity=0.289 Sum_probs=36.5
Q ss_pred eEEEecCCCcCCCCCCCC-------CCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 586 RLILLDYDGTVMPQTSED-------KRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~-------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
+++++|+||||++..+.. ..+.+.+.++|+.|.+ .+..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999865311 2356789999999996 489999999876
No 164
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.35 E-value=0.1 Score=51.43 Aligned_cols=56 Identities=14% Similarity=0.171 Sum_probs=44.0
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC-hhhHHhhhc
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG-KDSLGNWFS 641 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~-~~~L~~~f~ 641 (755)
-..+++++|+||||+... ...+.+.+.++|++|.+ .+..++|+|+.+ ...+..++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~ 79 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEK 79 (170)
T ss_pred CCCCEEEEecCCccccCC--CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHH
Confidence 477999999999999753 33567899999999986 478999999998 455554443
No 165
>PTZ00445 p36-lilke protein; Provisional
Probab=94.28 E-value=0.076 Score=53.58 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=46.6
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCCCCC---CC---------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMPQTS---ED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~---~~---------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
..+.+++.++...+|+|++|+|-||++..+ .+ ...++++...+.+|.+ .+..|+|||=-+.
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~ 102 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccch
Confidence 345567778889999999999999998221 11 2368899999999986 5899999985444
No 166
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.02 E-value=0.1 Score=54.34 Aligned_cols=62 Identities=13% Similarity=0.237 Sum_probs=45.9
Q ss_pred ccChHHHHHHhhccCceEEEecCCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHh
Q 004411 570 KLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE-------------------------------DKRPSTEVLSILNDLC 618 (755)
Q Consensus 570 ~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~-------------------------------~~~p~~~~~~~L~~L~ 618 (755)
=.++++|.+.....+.-.|.+|+|||++...+. ...|-+.++++|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 367888888765544558999999999953210 1124455899999998
Q ss_pred cCCCCcEEEEcCCC
Q 004411 619 NDPKNAVFIVSGRG 632 (755)
Q Consensus 619 ~d~~~~V~IvSGR~ 632 (755)
+ .+..++++|||.
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 6 489999999996
No 167
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.00 E-value=0.091 Score=51.56 Aligned_cols=62 Identities=23% Similarity=0.334 Sum_probs=46.0
Q ss_pred cccccChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCC-CcEEEEcCCC
Q 004411 567 EFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK-NAVFIVSGRG 632 (755)
Q Consensus 567 ~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~-~~V~IvSGR~ 632 (755)
++..++.+.- -.++..+|.|++|.|.||++. ....++++..+.++++.+.-+ ..|+|+|-..
T Consensus 25 si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 25 SIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred ChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 4555665331 145679999999999999975 466778999999999997522 2589999873
No 168
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=93.72 E-value=0.061 Score=51.41 Aligned_cols=60 Identities=18% Similarity=0.178 Sum_probs=40.2
Q ss_pred ccCceEEEecCCCcCCCCCC----C----CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 582 KTNSRLILLDYDGTVMPQTS----E----DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~----~----~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
..++||+++|.||||++-.- . .++... ==.-++.|.+ .+.+|+|+|||.-.-+++....+
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~-DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVR-DGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeecc-CcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 35789999999999997330 1 111100 0012344443 48999999999999999998764
No 169
>PRK06769 hypothetical protein; Validated
Probab=93.71 E-value=0.054 Score=53.51 Aligned_cols=50 Identities=22% Similarity=0.198 Sum_probs=39.0
Q ss_pred cCceEEEecCCCcCCCCCC----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 583 TNSRLILLDYDGTVMPQTS----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
+..|+|++|.||||.+... ..-.+-+.+.++|++|.+ .+.+++|+|+.+.
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~~ 55 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQPG 55 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEECCch
Confidence 4679999999999976532 122356889999999987 4889999998763
No 170
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=93.71 E-value=0.86 Score=51.25 Aligned_cols=138 Identities=13% Similarity=0.136 Sum_probs=79.4
Q ss_pred eEEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------cc
Q 004411 327 IVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL---------NF 396 (755)
Q Consensus 327 ~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~---------~~ 396 (755)
.++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 34556677 55667888999999998655 5543 54443222 2333333333211 0000 00
Q ss_pred CCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC
Q 004411 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (755)
Q Consensus 397 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (755)
.. .++.++. ...+..++|++||++|..| |-+..|+++++. |.|+--+.
T Consensus 277 ~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~---------------------P~Ilip~~ 324 (396)
T TIGR03492 277 QK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK---------------------PVIQLPGK 324 (396)
T ss_pred cc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC---------------------CEEEEeCC
Confidence 00 0133221 2467899999999999986 345599999875 33333211
Q ss_pred Cc------ccc---c-CCcEEeCCCCHHHHHHHHHHHhcCC
Q 004411 477 GC------SPS---L-SGAIRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 477 G~------~~~---l-~~ai~VnP~d~~~~A~ai~~aL~m~ 507 (755)
+. .+. + .+++.+...+++.+++++.++|+++
T Consensus 325 ~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 325 GPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred CCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 11 011 1 3556666678899999999999864
No 171
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.70 E-value=0.058 Score=52.63 Aligned_cols=43 Identities=26% Similarity=0.385 Sum_probs=30.9
Q ss_pred eEEEecCCCcCCCCCCCCC---------CCCHHHHHHHHHHhcCCCCcEEEEc
Q 004411 586 RLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVS 629 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~---------~p~~~~~~~L~~L~~d~~~~V~IvS 629 (755)
|+.++|+||||....+... ...+.+.+.|++|.++ +..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEe
Confidence 6789999999986543211 2345799999999874 88999998
No 172
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=93.66 E-value=13 Score=41.04 Aligned_cols=256 Identities=15% Similarity=0.085 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh--hhCCEEEE
Q 004411 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLIGF 252 (755)
Q Consensus 175 vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l--l~~Dligf 252 (755)
+=..|++.+.+ .+| |+|.||.=-.-.+...+-....++||++. |-=-=+.|. .-|.-+|+.|.+ --||+---
T Consensus 55 ~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~ 128 (346)
T PF02350_consen 55 AIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFA 128 (346)
T ss_dssp HHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEE
T ss_pred HHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhcc
Confidence 33444444444 477 89999877666555555455567887653 211000121 123445555554 23677666
Q ss_pred eCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEe
Q 004411 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGV 332 (755)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~V 332 (755)
-|..+.++.++ .|.+. ++ +. .+-.+++|.-........+.. ....+-....++.+++..
T Consensus 129 ~t~~~~~~L~~-----~G~~~--~r----I~--------~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~ 187 (346)
T PF02350_consen 129 PTEEARERLLQ-----EGEPP--ER----IF--------VVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTL 187 (346)
T ss_dssp SSHHHHHHHHH-----TT--G--GG----EE--------E---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-
T ss_pred CCHHHHHHHHh-----cCCCC--Ce----EE--------EEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEe
Confidence 68887777764 34321 11 11 122456664422211110000 011222222344455555
Q ss_pred cccccc---CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecC
Q 004411 333 DDMDLF---KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409 (755)
Q Consensus 333 dRld~~---KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~ 409 (755)
=|.... ......+.+++.+.+. +++. +|....++ + ...+.+.+...++ ..|.++ .
T Consensus 188 H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~----p---~~~~~i~~~l~~~---------~~v~~~-~ 245 (346)
T PF02350_consen 188 HPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN----P---RGSDIIIEKLKKY---------DNVRLI-E 245 (346)
T ss_dssp S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S-----H---HHHHHHHHHHTT----------TTEEEE--
T ss_pred CcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC----c---hHHHHHHHHhccc---------CCEEEE-C
Confidence 444433 3466777888888776 5543 44444211 1 2223333332221 136655 5
Q ss_pred CCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc---CCcE
Q 004411 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SGAI 486 (755)
Q Consensus 410 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai 486 (755)
+++..++.++++.|+++|-.|- | +..||..++. |+|.=...|-.++. ..++
T Consensus 246 ~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~---------------------P~v~iR~~geRqe~r~~~~nv 299 (346)
T PF02350_consen 246 PLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK---------------------PVVNIRDSGERQEGRERGSNV 299 (346)
T ss_dssp ---HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-----------------------EEECSSS-S-HHHHHTTSEE
T ss_pred CCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC---------------------eEEEecCCCCCHHHHhhcceE
Confidence 8999999999999999987772 2 2339999865 44443444544443 2466
Q ss_pred EeCCCCHHHHHHHHHHHhcC
Q 004411 487 RVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m 506 (755)
+|. .|.+++.+||.+++..
T Consensus 300 lv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 300 LVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EET-SSHHHHHHHHHHHHH-
T ss_pred EeC-CCHHHHHHHHHHHHhC
Confidence 666 7999999999999975
No 173
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.60 E-value=0.14 Score=55.12 Aligned_cols=58 Identities=17% Similarity=0.292 Sum_probs=46.1
Q ss_pred CceEEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+++++|+||||...... +..+.+.+.++|++|.+ .+..++|+|||+....+..+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHH
Confidence 4579999999999974321 34677899999999987 4899999999999877665543
No 174
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.45 E-value=0.054 Score=53.55 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=36.5
Q ss_pred eEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
|++++|.||||....+ .+..+.+.+.++|++|.+ .+..++|+|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 7899999999995321 123445789999999996 4899999998763
No 175
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=92.66 E-value=0.11 Score=53.02 Aligned_cols=36 Identities=11% Similarity=-0.033 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+||.....++.+...
T Consensus 86 ~~~g~~~~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~ 121 (219)
T TIGR00338 86 LTEGAEELVKTLKE-KGYKVAVISGGFDLFAEHVKDK 121 (219)
T ss_pred cCCCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 45678889999986 4889999999988887777654
No 176
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=92.57 E-value=0.085 Score=52.34 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=36.5
Q ss_pred CceEEEecCCCcCCCCCC------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 584 NSRLILLDYDGTVMPQTS------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
..|++++|.||||.-... ..-.+-+.+.++|++|.+ .+..++|+|..+
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 368999999999865321 112355788999999997 488999999876
No 177
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=92.55 E-value=1.1 Score=51.14 Aligned_cols=107 Identities=17% Similarity=0.265 Sum_probs=63.4
Q ss_pred HHHc---CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc
Q 004411 320 KEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF 396 (755)
Q Consensus 320 r~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~ 396 (755)
|++| .+..++.+..++ .|=-+..+..+.++|+.-|+.+ |++...|. .+ ++.+.+.+.+ .
T Consensus 276 R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~----~ 337 (468)
T PF13844_consen 276 RAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAA----H 337 (468)
T ss_dssp TGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHH----T
T ss_pred HHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHH----c
Confidence 4455 355566666776 5667899999999999999876 76665443 11 1233333333 2
Q ss_pred CCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 397 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
|-. -..|+|.. ..+.+|..+.|+.+|||+-|..+-| +.+.+||+.+|.
T Consensus 338 Gv~-~~Ri~f~~-~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmGV 385 (468)
T PF13844_consen 338 GVD-PDRIIFSP-VAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMGV 385 (468)
T ss_dssp TS--GGGEEEEE----HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-
T ss_pred CCC-hhhEEEcC-CCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcCC
Confidence 432 23477654 6788999999999999999987766 456789999854
No 178
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.48 E-value=0.16 Score=52.95 Aligned_cols=47 Identities=19% Similarity=0.331 Sum_probs=38.1
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (755)
+.+++++|+||||.. ...+-+.+.++|++|.+ .+..++|+|..+...
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHHHH-CCCEEEEEeCCCCCh
Confidence 367899999999987 33467899999999997 488999988776654
No 179
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=92.20 E-value=0.21 Score=51.08 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 75 l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 75 IREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred cCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHH
Confidence 44566788888876 5889999999999888887765
No 180
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.09 E-value=0.18 Score=52.50 Aligned_cols=50 Identities=24% Similarity=0.378 Sum_probs=38.6
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhcC
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSG 642 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~~ 642 (755)
++||+||||.+. .. +-+.+.+.|+.|.+. +.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~---~~-~~~~a~e~i~~l~~~-g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLG---HK-PIPGAAEALNRLRAK-GKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcC---Cc-cCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHH
Confidence 579999999983 33 345889999999864 78888887 8999877666654
No 181
>PLN02954 phosphoserine phosphatase
Probab=92.07 E-value=0.18 Score=51.66 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 86 ~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~ 120 (224)
T PLN02954 86 SPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAI 120 (224)
T ss_pred CccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 3677788888886 4889999999999988887664
No 182
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=92.05 E-value=8 Score=42.97 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=48.4
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
|.+ .++++..++.++++.|++++-.|- =++ .||.+.|.+ ++.+. .=.+.+.
T Consensus 264 v~l-~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P--------------------vv~l~---~R~e~~~ 314 (365)
T TIGR03568 264 FRL-FKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP--------------------TINIG---TRQKGRL 314 (365)
T ss_pred EEE-ECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC--------------------EEeec---CCchhhh
Confidence 554 468999999999999999985442 122 699998651 23332 2222232
Q ss_pred -C--cEEeCCCCHHHHHHHHHHHhc
Q 004411 484 -G--AIRVNPWNVDAVADAMDSALQ 505 (755)
Q Consensus 484 -~--ai~VnP~d~~~~A~ai~~aL~ 505 (755)
| .+.| +.|.+++.+++.+++.
T Consensus 315 ~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 315 RADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 3447 6799999999998654
No 183
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.92 E-value=0.29 Score=50.51 Aligned_cols=57 Identities=16% Similarity=0.214 Sum_probs=43.7
Q ss_pred CceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh---HH
Q 004411 584 NSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS---LG 637 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~---L~ 637 (755)
++-+++||+|-|++...+ ..+.+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 567899999999986321 134566899999999997 499999999999765 44
Q ss_pred hhhc
Q 004411 638 NWFS 641 (755)
Q Consensus 638 ~~f~ 641 (755)
+++.
T Consensus 155 ~nL~ 158 (229)
T TIGR01675 155 DNLI 158 (229)
T ss_pred HHHH
Confidence 4443
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=91.83 E-value=0.19 Score=58.14 Aligned_cols=50 Identities=22% Similarity=0.318 Sum_probs=38.3
Q ss_pred cCceEEEecCCCcCCCCCCCC---------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 583 TNSRLILLDYDGTVMPQTSED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~---------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
.+.|+++||+||||....+.. ..+.+.+.+.|++|.++ +..++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCcc
Confidence 467999999999998643211 12457899999999974 899999997554
No 185
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.58 E-value=0.15 Score=54.00 Aligned_cols=54 Identities=26% Similarity=0.381 Sum_probs=40.4
Q ss_pred cCceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHH
Q 004411 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~ 637 (755)
.+..+|++|+|+|++...+ ....+-+.+.++|+.|.+ .|..++++|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHH
Confidence 4567999999999985331 022345788999999986 48899999999855433
No 186
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=91.47 E-value=0.38 Score=48.04 Aligned_cols=35 Identities=14% Similarity=-0.114 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.++|+.|.+ .+..++|+||.....++.++..+
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~ 117 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKL 117 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHh
Confidence 455678888886 48899999999988888887643
No 187
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=91.35 E-value=0.26 Score=52.48 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
-+.+.++|+.|.+ .+..++|+|+.....++..+...
T Consensus 144 ~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~ 179 (273)
T PRK13225 144 FPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQ 179 (273)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 3567788888886 48899999999999888887653
No 188
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=91.31 E-value=0.4 Score=52.30 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=47.2
Q ss_pred CceEEEecCCCcCCCCC--CC------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC
Q 004411 584 NSRLILLDYDGTVMPQT--SE------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~--~~------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~ 644 (755)
.+|+|++|+|+||.... .. -..+.+.+.++|++|.+ .|..++|+|.+....+...|..-|
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHhCc
Confidence 47899999999998742 11 11245789999999986 588999999999999888887633
No 189
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.20 E-value=0.3 Score=51.39 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=48.0
Q ss_pred CceEEEecCCCcCCCCCC-----------------C-------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh
Q 004411 584 NSRLILLDYDGTVMPQTS-----------------E-------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----------------~-------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (755)
.+-++++|+|+|++...+ . .+.+-+.++++++.|.+ .|..|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 457999999999994211 1 34456789999999996 5999999999986544333
Q ss_pred hcCCCCceEEcCCceEEEe
Q 004411 640 FSGVEKLGLSAEHGYFTRW 658 (755)
Q Consensus 640 f~~i~~l~liaenGa~i~~ 658 (755)
...+.+.|+-.....++|.
T Consensus 179 ~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHcCCCCcceeeecC
Confidence 3333233332223344443
No 190
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=90.69 E-value=0.37 Score=47.75 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=42.9
Q ss_pred ceEEEecCCCcCCCCCC-------C----------------CCCCCHHHHHHHHHHhcCCCCcEEEEcCC-ChhhHHhhh
Q 004411 585 SRLILLDYDGTVMPQTS-------E----------------DKRPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWF 640 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~-------~----------------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~f 640 (755)
.||++||+||||....- . ...+-+.+.++|+.|.+ .+..++|+|++ ....++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 48999999999986431 0 12344789999999996 48899999998 777766665
Q ss_pred cC
Q 004411 641 SG 642 (755)
Q Consensus 641 ~~ 642 (755)
..
T Consensus 81 ~~ 82 (174)
T TIGR01685 81 GT 82 (174)
T ss_pred Hh
Confidence 43
No 191
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.65 E-value=0.2 Score=49.01 Aligned_cols=46 Identities=20% Similarity=0.372 Sum_probs=35.2
Q ss_pred ceEEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004411 585 SRLILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (755)
.|+++||.||||....+. .-.+-+.+.++|++|.+ .+.+++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 378999999999874321 12345789999999996 48899999975
No 192
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.65 E-value=10 Score=41.98 Aligned_cols=136 Identities=15% Similarity=0.214 Sum_probs=83.9
Q ss_pred ceEEEEecccccc-CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 326 KIVILGVDDMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 326 ~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
+-+++..=|-... +++...+.|+.++++++|+.. +| .|.--+ +.. ++++ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v-------~e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRV-------RELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhh-------hHHH---HHHhCCC--CcE
Confidence 4566667776655 999999999999999998865 32 232111 222 2222 1122321 136
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS- 483 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 483 (755)
+++ .++...+...|...|-+.+--| |=..-||-.-+. -++++=+.+.=.+.+.
T Consensus 265 ~li-~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~--------------------Pvl~lR~~TERPE~v~a 318 (383)
T COG0381 265 KLI-DPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK--------------------PVLVLRDTTERPEGVEA 318 (383)
T ss_pred EEe-CCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC--------------------cEEeeccCCCCccceec
Confidence 655 5899999999999996655444 122234444432 1455544454445553
Q ss_pred C-cEEeCCCCHHHHHHHHHHHhcCCH
Q 004411 484 G-AIRVNPWNVDAVADAMDSALQMEN 508 (755)
Q Consensus 484 ~-ai~VnP~d~~~~A~ai~~aL~m~~ 508 (755)
| .++|+. |.+.+.+++.++++++.
T Consensus 319 gt~~lvg~-~~~~i~~~~~~ll~~~~ 343 (383)
T COG0381 319 GTNILVGT-DEENILDAATELLEDEE 343 (383)
T ss_pred CceEEeCc-cHHHHHHHHHHHhhChH
Confidence 4 355665 78999999999999764
No 193
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=90.60 E-value=0.32 Score=45.69 Aligned_cols=68 Identities=13% Similarity=0.132 Sum_probs=40.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-----HHhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-----~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
-|+|++|+++..+++.+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|...+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 499999998877777777744 48999999997543211 12222222 3345689998888877777664
No 194
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=90.44 E-value=0.27 Score=49.50 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.++|+.|.+ . ..++|+||.....++..+..+
T Consensus 71 pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 556788888886 3 789999999999988887653
No 195
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=90.44 E-value=0.64 Score=50.71 Aligned_cols=36 Identities=14% Similarity=-0.112 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+||......+.....
T Consensus 182 l~pGa~elL~~Lk~-~G~~~aIvSgg~~~~~~~l~~~ 217 (322)
T PRK11133 182 LMPGLTELVLKLQA-LGWKVAIASGGFTYFADYLRDK 217 (322)
T ss_pred CChhHHHHHHHHHH-cCCEEEEEECCcchhHHHHHHH
Confidence 45667778888886 4889999999887665555543
No 196
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=90.36 E-value=0.3 Score=53.80 Aligned_cols=47 Identities=17% Similarity=0.344 Sum_probs=38.1
Q ss_pred CceEEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004411 584 NSRLILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (755)
++|++++|.||||....+ ....+.+.+.+.|+.|.+ .+..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998532 234667889999999985 58899999985
No 197
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=90.18 E-value=0.39 Score=46.89 Aligned_cols=36 Identities=14% Similarity=-0.044 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.+.++|+.+.+ .+..++|+||.....++.++..+
T Consensus 75 ~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~ 110 (177)
T TIGR01488 75 RPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKL 110 (177)
T ss_pred CcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHc
Confidence 3567777888775 47889999999888888877643
No 198
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=90.00 E-value=0.49 Score=45.35 Aligned_cols=58 Identities=16% Similarity=0.194 Sum_probs=44.2
Q ss_pred CceEEEecCCCcCCCCC--C--C--CC-----------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhh
Q 004411 584 NSRLILLDYDGTVMPQT--S--E--DK-----------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~--~--~--~~-----------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f 640 (755)
+++++++|+||||+... + . +. .+-+.+.+.|+.|.+ +..++|+|+.....++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 36789999999999752 1 0 00 224678899999984 6889999999999988877
Q ss_pred cCC
Q 004411 641 SGV 643 (755)
Q Consensus 641 ~~i 643 (755)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 654
No 199
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=88.55 E-value=11 Score=42.19 Aligned_cols=71 Identities=17% Similarity=0.109 Sum_probs=49.8
Q ss_pred hHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc----C----CcE
Q 004411 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL----S----GAI 486 (755)
Q Consensus 415 el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----~----~ai 486 (755)
++-.+-+.|...|+||++|+.|.+|-|..+.|. |-|.+..+|..-.+ . -||
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGi---------------------PSvtTNlSGFGcfMeehi~d~~ayGI 551 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI---------------------PSVTTNLSGFGCFMEEHIEDPQAYGI 551 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEecc---------------------ccccccccchhhhHHHHhcCchhceE
Confidence 667788999999999999999999999999865 44555555543222 2 144
Q ss_pred -EeC-----C-CCHHHHHHHHHHHhcC
Q 004411 487 -RVN-----P-WNVDAVADAMDSALQM 506 (755)
Q Consensus 487 -~Vn-----P-~d~~~~A~ai~~aL~m 506 (755)
+|+ | .+++++++-|..-...
T Consensus 552 YIvDRRfks~deSv~qL~~~m~~F~~q 578 (692)
T KOG3742|consen 552 YIVDRRFKSPDESVQQLASFMYEFCKQ 578 (692)
T ss_pred EEEecccCChhhHHHHHHHHHHHHHHH
Confidence 333 2 3467778777776653
No 200
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=88.32 E-value=0.37 Score=47.52 Aligned_cols=58 Identities=16% Similarity=0.116 Sum_probs=42.2
Q ss_pred ceEEEecCCCcCCCCC----CCC---CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 585 SRLILLDYDGTVMPQT----SED---KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~----~~~---~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.|+++||.||||++-. +.. +..+.+=...++.|.+ .+..++|+|+++...++..+..+
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 7999999999999842 111 1222333445666765 48899999999999999988765
No 201
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=88.22 E-value=0.87 Score=44.80 Aligned_cols=35 Identities=6% Similarity=0.031 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 74 ~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 108 (188)
T TIGR01489 74 DPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEG 108 (188)
T ss_pred CccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHH
Confidence 3456667777764 3677888888877776666553
No 202
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=87.96 E-value=0.95 Score=46.15 Aligned_cols=37 Identities=8% Similarity=0.062 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.+.++|+.|.+ .+..++|+||.....++.++..+
T Consensus 71 l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 71 IREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 34566678888876 48899999999998888877654
No 203
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=87.18 E-value=0.8 Score=46.82 Aligned_cols=33 Identities=12% Similarity=-0.107 Sum_probs=25.0
Q ss_pred HHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 609 EVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 609 ~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.++|+.|++ .+..++|+||.....++..+..
T Consensus 96 g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 128 (222)
T PRK10826 96 GVREALALCKA-QGLKIGLASASPLHMLEAVLTM 128 (222)
T ss_pred CHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHh
Confidence 35667777775 4788999999988887777754
No 204
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=86.93 E-value=0.72 Score=48.83 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=36.4
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~ 634 (755)
+.+.+++|+||||.. ...+-+...+.|++|.+. +.+++++|-++..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~~-g~~~iflTNn~~~ 52 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKAA-GKPVIFLTNNSTR 52 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHHc-CCeEEEEeCCCCC
Confidence 356799999999997 344557999999999974 8889888766543
No 205
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=86.00 E-value=9.1 Score=41.79 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=83.7
Q ss_pred ccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004411 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (755)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~ 412 (755)
-.-|++-+....|+++.+... .+ +.++ ..-+ -+...+++.+++.+.+.++ ||.. .+..+++.++
T Consensus 192 NSgd~sNnHieaL~~L~~~~~--~~----~kIi--vPLs--Yg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mp 255 (360)
T PF07429_consen 192 NSGDPSNNHIEALEALKQQFG--DD----VKII--VPLS--YGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMP 255 (360)
T ss_pred CCCCCCccHHHHHHHHHHhcC--CC----eEEE--EECC--CCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCC
Confidence 456788878777766665321 12 2222 2111 2222456777777777665 4432 3666788999
Q ss_pred hhhHHHHHHhCcEEEEcCCC-cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEe--
Q 004411 413 TQDKVPYYAIAECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRV-- 488 (755)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~V-- 488 (755)
.+|+.++++.+|+.++...| .|||...+ .+.+ +.++++|+-.-....+ ..++.|
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~---------------------G~~v~L~~~np~~~~l~~~~ipVlf 313 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL---------------------GKKVFLSRDNPFWQDLKEQGIPVLF 313 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc---------------------CCeEEEecCChHHHHHHhCCCeEEe
Confidence 99999999999999999986 88887643 1222 2478888877666666 345433
Q ss_pred --CCCCHHHHHHHHHHHhc
Q 004411 489 --NPWNVDAVADAMDSALQ 505 (755)
Q Consensus 489 --nP~d~~~~A~ai~~aL~ 505 (755)
+.-|...+++|=+++..
T Consensus 314 ~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 314 YGDELDEALVREAQRQLAN 332 (360)
T ss_pred ccccCCHHHHHHHHHHHhh
Confidence 44455555555444433
No 206
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=85.94 E-value=0.12 Score=53.55 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=51.2
Q ss_pred cCceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh
Q 004411 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (755)
-+...|++|+|+|++...+ ....+-+.++++++.+.+ .|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 4678999999999985210 012334568899999987 4999999999998855544
Q ss_pred hcCCCCceEEcCCceEEEec
Q 004411 640 FSGVEKLGLSAEHGYFTRWS 659 (755)
Q Consensus 640 f~~i~~l~liaenGa~i~~~ 659 (755)
...+...|+-.-.+.+++..
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~ 168 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPD 168 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEE
T ss_pred HHHHHHcCCCccchhccccc
Confidence 44443344434356666654
No 207
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=85.33 E-value=8.6 Score=42.84 Aligned_cols=96 Identities=11% Similarity=0.061 Sum_probs=58.6
Q ss_pred ecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc----ccc
Q 004411 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSL 482 (755)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l 482 (755)
+.+.+++. .++..||++|.. -|.| +..|++++|. |+|+.-..+-. ..+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G~---------------------P~v~~p~~~dq~~~a~~l 330 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITH---GGMN-STMEALFNGV---------------------PMVAVPQGADQPMTARRI 330 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhCC---------------------CEEecCCcccHHHHHHHH
Confidence 34667764 568899988854 4666 5689999975 44443332211 112
Q ss_pred ---CCcEEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHH
Q 004411 483 ---SGAIRVNP--WNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAK 532 (755)
Q Consensus 483 ---~~ai~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 532 (755)
..|+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++
T Consensus 331 ~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 331 AELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred HHCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 12566654 46799999999999864 344455555555544 34444444
No 208
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=85.07 E-value=0.96 Score=46.05 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
-+.+.++|+.|.+ .+..++|+||.....++.++...
T Consensus 95 ~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 130 (226)
T PRK13222 95 YPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEAL 130 (226)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 3455667777775 47889999999998888887643
No 209
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=84.80 E-value=70 Score=35.51 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=47.3
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc----c
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC----S 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~ 479 (755)
|. +.+.++.. +++..||++| .+-|+| +..|++++|. |+|+--+.+- +
T Consensus 290 v~-~~~~~p~~---~ll~~~d~~I---~hgG~~-t~~eal~~Gv---------------------P~v~~P~~~dQ~~~a 340 (401)
T cd03784 290 VR-VVDFVPHD---WLLPRCAAVV---HHGGAG-TTAAALRAGV---------------------PQLVVPFFGDQPFWA 340 (401)
T ss_pred eE-EeCCCCHH---HHhhhhheee---ecCCch-hHHHHHHcCC---------------------CEEeeCCCCCcHHHH
Confidence 44 44566654 5678899999 456654 5579999975 4444334331 2
Q ss_pred ccc-C-C-cEEeCCC--CHHHHHHHHHHHhc
Q 004411 480 PSL-S-G-AIRVNPW--NVDAVADAMDSALQ 505 (755)
Q Consensus 480 ~~l-~-~-ai~VnP~--d~~~~A~ai~~aL~ 505 (755)
..+ . | |+.+++. +.+++++++.++|+
T Consensus 341 ~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 341 ARVAELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHHHHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 222 1 3 5666654 68999999999998
No 210
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=84.38 E-value=4.1 Score=43.45 Aligned_cols=92 Identities=9% Similarity=0.134 Sum_probs=58.5
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++ ++++++.. .+ .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~----~l~~~~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLD----ELKKFAKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHH----HHHHHHHh----CC-----CE
Confidence 367999999999987666777777653 23333 333443331 2222 34444332 11 24
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
.++ + ..+++..+++.||+++.. -|.+..|++++|.
T Consensus 227 ~~~-~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 ILF-I--DVENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred EEE-e--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 433 2 357899999999999884 3578999999975
No 211
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=84.29 E-value=1.7 Score=47.48 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=33.2
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcC---CCCcEEEE---cCCChhhHHh
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCND---PKNAVFIV---SGRGKDSLGN 638 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d---~~~~V~Iv---SGR~~~~L~~ 638 (755)
.++||+||||.. ...+-+...++|+.|... -+..++++ ||++.....+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 589999999997 234468899999999863 05556555 4666665333
No 212
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=84.27 E-value=1.4 Score=42.71 Aligned_cols=55 Identities=11% Similarity=0.311 Sum_probs=41.3
Q ss_pred EEEecCCCcCCCCC------C--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh---hHHhhhcC
Q 004411 587 LILLDYDGTVMPQT------S--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD---SLGNWFSG 642 (755)
Q Consensus 587 lI~lD~DGTL~~~~------~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~---~L~~~f~~ 642 (755)
++++|+|||++... + ......+.+.++.+++.+ .|..++-+|+|+.. ..+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHH
Confidence 47899999999752 1 112455788899999997 48999999999965 45666653
No 213
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=84.11 E-value=1.4 Score=45.35 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
-+.+.++|+.|.+. +..++++|+.+...++..+..
T Consensus 88 ~pGv~~~l~~L~~~-~i~~avaS~s~~~~~~~~L~~ 122 (221)
T COG0637 88 IPGVVELLEQLKAR-GIPLAVASSSPRRAAERVLAR 122 (221)
T ss_pred CccHHHHHHHHHhc-CCcEEEecCChHHHHHHHHHH
Confidence 35677888888864 688999999998887777753
No 214
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=82.82 E-value=0.99 Score=43.57 Aligned_cols=56 Identities=18% Similarity=0.322 Sum_probs=37.6
Q ss_pred eEEEecCCCcCCCCCCCCC----------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 586 RLILLDYDGTVMPQTSEDK----------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~----------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
|++++|+||||+....... ..-|.+.+.|+.|+. ...|+|.|..+....+.....+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999996432110 123577788888875 5789999999988777776654
No 215
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=82.57 E-value=1.2 Score=45.58 Aligned_cols=36 Identities=17% Similarity=0.067 Sum_probs=28.1
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
...+...++++.|.+ .|.+|+|+||-.....++...
T Consensus 77 ~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~ 112 (212)
T COG0560 77 RLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAE 112 (212)
T ss_pred cCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHH
Confidence 345678888899987 599999999998876665554
No 216
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=82.20 E-value=3.8 Score=46.19 Aligned_cols=80 Identities=13% Similarity=0.171 Sum_probs=58.5
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCCCC----C------CCC---CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHh
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT----S------EDK---RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~~~----~------~~~---~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~ 638 (755)
.+..++.+-.....|.++||+|+||..-. . .+. .+-.++.+.+..|.+ .|...+|+|-+.....++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 44566777777788999999999998522 0 111 233567778888886 588889999999999999
Q ss_pred hhcCCCCceEEcCC
Q 004411 639 WFSGVEKLGLSAEH 652 (755)
Q Consensus 639 ~f~~i~~l~liaen 652 (755)
.|..-|++.|=-|+
T Consensus 288 vF~khp~MiLkeed 301 (574)
T COG3882 288 VFRKHPDMILKEED 301 (574)
T ss_pred HHhhCCCeEeeHhh
Confidence 99877777554333
No 217
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=81.94 E-value=1.6 Score=48.66 Aligned_cols=35 Identities=29% Similarity=0.289 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.++|+.|.+ .+..++|+|+++...++..+..+
T Consensus 219 pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~l 253 (381)
T PLN02575 219 TGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSI 253 (381)
T ss_pred cCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 355567888876 48899999999999888877643
No 218
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=81.94 E-value=0.79 Score=49.15 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=21.1
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCC
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMP 598 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~ 598 (755)
+...+.++-...+.++|+||+||||++
T Consensus 27 ~~~~~~~~~~~~~~k~VIFDlDGTLvD 53 (286)
T PLN02779 27 STARVASASASALPEALLFDCDGVLVE 53 (286)
T ss_pred hhhhhhhhccccCCcEEEEeCceeEEc
Confidence 345555665666789999999999998
No 219
>PLN02940 riboflavin kinase
Probab=81.39 E-value=1.7 Score=48.55 Aligned_cols=33 Identities=9% Similarity=0.090 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 96 pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 96 PGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred cCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 345568888886 488999999999888776654
No 220
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=80.96 E-value=0.63 Score=46.59 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=20.4
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChh
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~ 634 (755)
.|-+.+.++|++|.+ .+..++++|+|+..
T Consensus 73 ~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 355788999999996 46678888888754
No 221
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=80.38 E-value=2.3 Score=41.91 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=34.3
Q ss_pred ceEEEecCCCcCCCCCCC------------C----------CCCCHHHHHHHHHHhcCCCCcEEEEcCCC-hhhHHhhhc
Q 004411 585 SRLILLDYDGTVMPQTSE------------D----------KRPSTEVLSILNDLCNDPKNAVFIVSGRG-KDSLGNWFS 641 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~------------~----------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~-~~~L~~~f~ 641 (755)
.|||+||+|+||-+.--. . -..-+++.++|+.|.+ .+..+++||=-. .+-.++.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 489999999999974310 0 0123688899999997 589999999544 445555554
Q ss_pred C
Q 004411 642 G 642 (755)
Q Consensus 642 ~ 642 (755)
.
T Consensus 82 ~ 82 (169)
T PF12689_consen 82 L 82 (169)
T ss_dssp H
T ss_pred h
Confidence 3
No 222
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=79.86 E-value=9.1 Score=36.50 Aligned_cols=73 Identities=23% Similarity=0.270 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004411 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (755)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (755)
.-+.+...+++++ ++..|.||.|-.-++..+. ..+.+++.++++..+|+. ||++..+.++..+-.+.+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~l----pv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFNL----PVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcCC----CEEEEcCccCHHHHHHHHHH
Confidence 3455666666665 3558889999877766665 667789999999999874 89999888888877776666
Q ss_pred CcE
Q 004411 423 AEC 425 (755)
Q Consensus 423 ADv 425 (755)
+++
T Consensus 110 ~~~ 112 (141)
T COG0816 110 AGV 112 (141)
T ss_pred cCC
Confidence 543
No 223
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=79.73 E-value=10 Score=43.91 Aligned_cols=101 Identities=19% Similarity=0.211 Sum_probs=73.9
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEE
Q 004411 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (755)
Q Consensus 327 ~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~ 406 (755)
.|+++..+ +.|=.++.+.-.-++|+.-|+-. |++-+.+ +.++..+.+++++++- |. +...++|
T Consensus 431 vVf~c~~n--~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~----Gv-~~eRL~f 493 (620)
T COG3914 431 VVFCCFNN--YFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAERE----GV-DSERLRF 493 (620)
T ss_pred EEEEecCC--cccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHc----CC-Chhheee
Confidence 34444554 47888999999999999999864 6666532 3346677788888764 42 3445776
Q ss_pred ecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
. .+.+.++-.|.|..||+++-|=-+-| ..++.|++-.+
T Consensus 494 ~-p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm~ 531 (620)
T COG3914 494 L-PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWMG 531 (620)
T ss_pred c-CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHhc
Confidence 5 57888999999999999998876655 56778888874
No 224
>PRK08238 hypothetical protein; Validated
Probab=79.34 E-value=4.1 Score=46.96 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
..+++.+.|+++.+ .|..++|+|+.....++.....+
T Consensus 73 ~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~l 109 (479)
T PRK08238 73 YNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHL 109 (479)
T ss_pred CChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 34789999999986 58999999999999888777654
No 225
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=79.09 E-value=2.9 Score=41.25 Aligned_cols=60 Identities=8% Similarity=0.076 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC------CCceEEcCCceEEEecCCCceeEcc
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV------EKLGLSAEHGYFTRWSKNSAWEICS 668 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i------~~l~liaenGa~i~~~~~~~w~~~~ 668 (755)
.+.|.+++..+...+ ....|+|+||-.-..+...|..+ ..+.+ ..|-.++... ..|....
T Consensus 73 ~Idp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi-~sn~~~ih~d--g~h~i~~ 138 (220)
T COG4359 73 KIDPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDI-VSNNDYIHID--GQHSIKY 138 (220)
T ss_pred ccCccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhhccccceeeeEE-eecCceEcCC--Cceeeec
Confidence 345566666667776 47899999999988888888754 12334 4455666554 4566443
No 226
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=78.99 E-value=13 Score=40.51 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=57.1
Q ss_pred CceEEEEecc--ccccCChH---HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004411 325 GKIVILGVDD--MDLFKGIS---LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (755)
Q Consensus 325 ~~~vil~VdR--ld~~KGi~---~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~ 399 (755)
...+.+-||- =.+.=+-. .++..+..+.+.++ .. +. |. +||-..++ ..+.+.++.+.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vt-tSRRTp~~---~~~~L~~~~~~-------- 207 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VT-TSRRTPPE---AEAALRELLKD-------- 207 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EE-cCCCCcHH---HHHHHHHhhcC--------
Confidence 4555555553 22222223 67777888877765 22 43 33 34333332 33334443321
Q ss_pred CCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
...+.++. .-+..=+.+++..||.++||. |..+|+. ||+++|.
T Consensus 208 -~~~~~~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMvs-EA~~tG~ 250 (311)
T PF06258_consen 208 -NPGVYIWD-GTGENPYLGFLAAADAIVVTE--DSVSMVS-EAAATGK 250 (311)
T ss_pred -CCceEEec-CCCCCcHHHHHHhCCEEEEcC--ccHHHHH-HHHHcCC
Confidence 11243443 333445889999999999997 8888875 9999864
No 227
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=78.74 E-value=3.2 Score=41.45 Aligned_cols=36 Identities=8% Similarity=-0.112 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.+.|+.+.+ .+..++|+||.....++.+...
T Consensus 88 ~~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~ 123 (202)
T TIGR01490 88 LYPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARI 123 (202)
T ss_pred ccHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHH
Confidence 34677788888876 4789999999998888777653
No 228
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=78.66 E-value=36 Score=37.73 Aligned_cols=83 Identities=16% Similarity=0.149 Sum_probs=53.8
Q ss_pred hhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc--ccc------c--
Q 004411 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPS------L-- 482 (755)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~------l-- 482 (755)
.+++.++|++||+++.=| | ++++-|..++|. |.|+=-+... .++ +
T Consensus 243 ~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~---------------------P~IliP~p~~~~~~Q~~NA~~l~~ 297 (357)
T COG0707 243 IDDMAALLAAADLVISRA---G-ALTIAELLALGV---------------------PAILVPYPPGADGHQEYNAKFLEK 297 (357)
T ss_pred HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCC---------------------CEEEeCCCCCccchHHHHHHHHHh
Confidence 456999999999988654 2 577889999976 3333333332 122 2
Q ss_pred -CCcEEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhhHh
Q 004411 483 -SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEKHYKYI 522 (755)
Q Consensus 483 -~~ai~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 522 (755)
..|+.+.-.+ .+.+++.|.++++.+ |+..+|....+.+
T Consensus 298 ~gaa~~i~~~~lt~~~l~~~i~~l~~~~--~~l~~m~~~a~~~ 338 (357)
T COG0707 298 AGAALVIRQSELTPEKLAELILRLLSNP--EKLKAMAENAKKL 338 (357)
T ss_pred CCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHhc
Confidence 1367776656 899999999999863 4444444433333
No 229
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=77.59 E-value=1.2 Score=43.99 Aligned_cols=15 Identities=27% Similarity=0.545 Sum_probs=13.5
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
+.++|++|+||||++
T Consensus 4 ~~~~viFD~DGTLiD 18 (188)
T PRK10725 4 RYAGLIFDMDGTILD 18 (188)
T ss_pred cceEEEEcCCCcCcc
Confidence 468999999999998
No 230
>PRK11587 putative phosphatase; Provisional
Probab=77.06 E-value=1.2 Score=45.55 Aligned_cols=16 Identities=31% Similarity=0.565 Sum_probs=13.8
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.+.|+||+||||++.
T Consensus 2 ~~k~viFDlDGTL~Ds 17 (218)
T PRK11587 2 RCKGFLFDLDGTLVDS 17 (218)
T ss_pred CCCEEEEcCCCCcCcC
Confidence 3678999999999983
No 231
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=76.63 E-value=4 Score=41.18 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=40.2
Q ss_pred ccCceEEEecCCCcCCCCCCCC----CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 582 KTNSRLILLDYDGTVMPQTSED----KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~~----~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+..+++++||+||||+...+.. ...-|.+.+.|+.+.+ ...|+|=|-.+...++..+.
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHH
Confidence 3567999999999999743211 1223577888888886 57788888777666655443
No 232
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=76.27 E-value=4.7 Score=39.17 Aligned_cols=60 Identities=12% Similarity=0.131 Sum_probs=44.4
Q ss_pred ccCceEEEecCCCcCCCCCCCC------C--------------------------CCCHHHHHHHHHHhcCCCCcEEEEc
Q 004411 582 KTNSRLILLDYDGTVMPQTSED------K--------------------------RPSTEVLSILNDLCNDPKNAVFIVS 629 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~~------~--------------------------~p~~~~~~~L~~L~~d~~~~V~IvS 629 (755)
+.++..+++|+|.||+...... . .+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 3567889999999999743210 0 013578899999984 57899999
Q ss_pred CCChhhHHhhhcCC
Q 004411 630 GRGKDSLGNWFSGV 643 (755)
Q Consensus 630 GR~~~~L~~~f~~i 643 (755)
..........+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99998887777655
No 233
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=75.62 E-value=4.8 Score=39.25 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=41.0
Q ss_pred ceEEEecCCCcCCCCCCCCC---------------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 585 SRLILLDYDGTVMPQTSEDK---------------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~---------------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
++.+++|+|+||+....... ..-+.+.+.|+.|.+ ...++|.|.-+....+..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 36799999999996431110 123578899999986 4788999888888777776654
No 234
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=75.45 E-value=1.3 Score=44.83 Aligned_cols=16 Identities=31% Similarity=0.605 Sum_probs=13.8
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.++|+||+||||++.
T Consensus 2 ~~~~viFD~DGTL~ds 17 (214)
T PRK13288 2 KINTVLFDLDGTLINT 17 (214)
T ss_pred CccEEEEeCCCcCccC
Confidence 3689999999999983
No 235
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=74.59 E-value=4.1 Score=42.34 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=29.5
Q ss_pred CCCHHHHHHHHHHhc-CCCCcEEEEcCCChhhHHhhhcC
Q 004411 605 RPSTEVLSILNDLCN-DPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~-d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.+.+.++++.+.+ ..+..++|+|--.--.++.++..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 356788888888853 34788899999888888888864
No 236
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=74.51 E-value=1.5 Score=43.06 Aligned_cols=15 Identities=20% Similarity=0.607 Sum_probs=13.2
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.++|+||+||||++.
T Consensus 1 ~~~iiFD~DGTL~ds 15 (185)
T TIGR02009 1 YKAVIFDMDGVIVDT 15 (185)
T ss_pred CCeEEEcCCCcccCC
Confidence 378999999999983
No 237
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=74.39 E-value=1.5 Score=45.77 Aligned_cols=17 Identities=29% Similarity=0.466 Sum_probs=14.6
Q ss_pred cCceEEEecCCCcCCCC
Q 004411 583 TNSRLILLDYDGTVMPQ 599 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~ 599 (755)
++.+.|+||+||||++.
T Consensus 20 ~~~k~viFDlDGTLiDs 36 (248)
T PLN02770 20 APLEAVLFDVDGTLCDS 36 (248)
T ss_pred CccCEEEEcCCCccCcC
Confidence 35789999999999983
No 238
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=74.02 E-value=7.3 Score=41.23 Aligned_cols=57 Identities=14% Similarity=0.250 Sum_probs=44.6
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
...+|++|+|-||.........+++.+.+.|.+|.+. +..+++=|--+.+....-+.
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~-g~vLvLWSyG~~eHV~~sl~ 177 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ-GCVLVLWSYGNREHVRHSLK 177 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc-CCEEEEecCCCHHHHHHHHH
Confidence 4579999999999986544556789999999999974 77778877777776555554
No 239
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=73.96 E-value=2.1 Score=42.98 Aligned_cols=14 Identities=36% Similarity=0.558 Sum_probs=12.5
Q ss_pred eEEEecCCCcCCCC
Q 004411 586 RLILLDYDGTVMPQ 599 (755)
Q Consensus 586 rlI~lD~DGTL~~~ 599 (755)
|+|+||+||||++.
T Consensus 1 k~viFDlDGTL~d~ 14 (203)
T TIGR02252 1 KLITFDAVGTLLAL 14 (203)
T ss_pred CeEEEecCCceeee
Confidence 57999999999984
No 240
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=72.96 E-value=3.3 Score=41.15 Aligned_cols=45 Identities=22% Similarity=0.321 Sum_probs=34.6
Q ss_pred ceEEEecCCCcCCCCCCC------CCCCCHHHHHHHHHHhcCCCCcEEEEcC
Q 004411 585 SRLILLDYDGTVMPQTSE------DKRPSTEVLSILNDLCNDPKNAVFIVSG 630 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~------~~~p~~~~~~~L~~L~~d~~~~V~IvSG 630 (755)
.++||+|-||||--+.+. +-...+.++++|.+|.+ .+..++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh-CCCeEEEEEC
Confidence 689999999999765431 11234688999999985 5899999985
No 241
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=72.36 E-value=27 Score=34.46 Aligned_cols=51 Identities=14% Similarity=0.109 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCC--CEEEEeCCccchHHHHHHhhcCCCeEEEE
Q 004411 168 EWQAYLSANKVFADKVMEVINPDE--DYVWIHDYHLMVLPSFLRKRFHRVKVGFF 220 (755)
Q Consensus 168 ~w~~Y~~vN~~fa~~i~~~~~~~~--DiVwvhDyhl~llp~~lr~~~~~~~i~~f 220 (755)
.|+.=..-=+..|+++.+.-+.+. |+|.-| +-+.-+-+||+.+|+++++-+
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 344444444455555554433222 999999 888888899999999997643
No 242
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=72.10 E-value=1.6 Score=43.61 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=11.6
Q ss_pred EEEecCCCcCCCC
Q 004411 587 LILLDYDGTVMPQ 599 (755)
Q Consensus 587 lI~lD~DGTL~~~ 599 (755)
+|++|+||||++.
T Consensus 2 ~viFD~DGTLiDs 14 (197)
T TIGR01548 2 ALVLDMDGVMADV 14 (197)
T ss_pred ceEEecCceEEec
Confidence 5899999999984
No 243
>PRK11590 hypothetical protein; Provisional
Probab=71.87 E-value=2.1 Score=43.61 Aligned_cols=15 Identities=33% Similarity=0.735 Sum_probs=13.4
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
++|+++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 578999999999995
No 244
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=71.68 E-value=2.1 Score=44.10 Aligned_cols=15 Identities=40% Similarity=0.647 Sum_probs=13.5
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.|+|+|||||||++.
T Consensus 10 ~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 10 VDTVLLDMDGTLLDL 24 (224)
T ss_pred CCEEEEcCCCCccch
Confidence 689999999999983
No 245
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=71.64 E-value=0.2 Score=59.90 Aligned_cols=142 Identities=20% Similarity=0.146 Sum_probs=82.6
Q ss_pred cChHHHHHHhhccCceEEEecCCCcCCCCCCC--CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh----------HHh
Q 004411 571 LGMHHIASAYNKTNSRLILLDYDGTVMPQTSE--DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS----------LGN 638 (755)
Q Consensus 571 l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~--~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~----------L~~ 638 (755)
+...++......-+.-|.++|+||||-++..+ .++.+.....+-.+..+ .-...++|||++.. ..+
T Consensus 175 fpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~~~pigid~~r 252 (732)
T KOG1050|consen 175 FPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVKALPIGIDVQR 252 (732)
T ss_pred CChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhc--cCCcceEEeccceeeeeecccccchHH
Confidence 55566776666666678999999999985421 22232333333333332 22356799999765 555
Q ss_pred hhcCCCCceEEcCCceEEEecCCCc-eeEcccCcC-----ccHHHHHHHHHHHHhc--------------CCCCcEEeec
Q 004411 639 WFSGVEKLGLSAEHGYFTRWSKNSA-WEICSLTRD-----FDWKEIAEPVMKLYTE--------------TTDGSFIEDK 698 (755)
Q Consensus 639 ~f~~i~~l~liaenGa~i~~~~~~~-w~~~~~~~~-----~~w~~~v~~i~~~y~~--------------~t~gs~iE~k 698 (755)
+.. +.++..+++||-.++.+.++. .....+..| ..+....++.++.|.+ +++|.-+|+-
T Consensus 253 ~v~-~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~ 331 (732)
T KOG1050|consen 253 FVK-LLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEEL 331 (732)
T ss_pred hhc-cccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHH
Confidence 553 457889999999998754222 111111111 2344556666666642 3444444444
Q ss_pred ceEEEEEeccCCCCcch
Q 004411 699 ETAIVWHHQHADPHFGS 715 (755)
Q Consensus 699 ~~~l~~hyr~ad~~~~~ 715 (755)
..++..||+..+..|+.
T Consensus 332 k~~v~~~v~rIn~~f~~ 348 (732)
T KOG1050|consen 332 KFCVSVHVRRINEKFGS 348 (732)
T ss_pred HHHhHhhhhhhhhccCC
Confidence 56777777777666653
No 246
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=71.47 E-value=1e+02 Score=37.16 Aligned_cols=135 Identities=13% Similarity=0.145 Sum_probs=74.2
Q ss_pred CceEEEEeccccccCChHHH-H---HHHHHHHHhCCCCCCc-EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004411 325 GKIVILGVDDMDLFKGISLK-F---LAMGQLLEQHPDLRGK-VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~-l---~A~~~ll~~~P~~~~~-vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~ 399 (755)
+..+++.+-|+..-|-..+. | .-+.++ ++.|+.... +++|. |+.+......-.++-+.|.++++.||..-...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IF-aGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIF-AGKAHPGDYMGKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEE-E----TT-HHHHHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEE-eccCCCCcHHHHHHHHHHHHHHHHHhcChhhc
Confidence 55678899999998976663 3 334444 456664333 55554 44432222223456677788888887642222
Q ss_pred CCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc
Q 004411 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479 (755)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 479 (755)
+.-.|+|+. ..+-.--..++.+|||-.-+|.+ ++| |||++. +-.+. .|.+.+|..-|+-
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~------p~E--ASGTSg--MK~~~----------NGaL~lstlDG~n 579 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTR------PKE--ASGTSG--MKAAM----------NGALNLSTLDGWN 579 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---T------TSS--SS-SHH--HHHHH----------TT-EEEEESSTCH
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCC------Ccc--ccCCCc--chhhc----------CCCeEEecccchh
Confidence 233588885 55666677899999999999864 455 344421 11111 3688999888875
Q ss_pred ccc
Q 004411 480 PSL 482 (755)
Q Consensus 480 ~~l 482 (755)
-++
T Consensus 580 iEi 582 (713)
T PF00343_consen 580 IEI 582 (713)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 247
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=70.89 E-value=2.5 Score=42.94 Aligned_cols=15 Identities=33% Similarity=0.596 Sum_probs=13.1
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
+|+|+||+||||++.
T Consensus 1 ~k~iiFD~DGTL~ds 15 (220)
T TIGR03351 1 ISLVVLDMAGTTVDE 15 (220)
T ss_pred CcEEEEecCCCeecc
Confidence 478999999999984
No 248
>PHA02597 30.2 hypothetical protein; Provisional
Probab=70.88 E-value=1.9 Score=43.02 Aligned_cols=15 Identities=33% Similarity=0.485 Sum_probs=13.4
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.|+|+||+||||++.
T Consensus 2 ~k~viFDlDGTLiD~ 16 (197)
T PHA02597 2 KPTILTDVDGVLLSW 16 (197)
T ss_pred CcEEEEecCCceEch
Confidence 578999999999984
No 249
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=69.84 E-value=2.7 Score=43.64 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=14.1
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.|+|+||+||||++.
T Consensus 9 ~~k~iiFDlDGTL~D~ 24 (238)
T PRK10748 9 RISALTFDLDDTLYDN 24 (238)
T ss_pred CceeEEEcCcccccCC
Confidence 4689999999999984
No 250
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=69.64 E-value=3.4 Score=43.87 Aligned_cols=16 Identities=38% Similarity=0.737 Sum_probs=14.0
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
-.++|+||+||||++.
T Consensus 12 ~~k~viFDlDGTL~Ds 27 (272)
T PRK13223 12 LPRLVMFDLDGTLVDS 27 (272)
T ss_pred cCCEEEEcCCCccccC
Confidence 4679999999999984
No 251
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=69.47 E-value=5.2 Score=40.55 Aligned_cols=15 Identities=27% Similarity=0.519 Sum_probs=13.4
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.++|+||+||||++.
T Consensus 2 ~~~viFDlDGTL~ds 16 (221)
T TIGR02253 2 IKAIFFDLDDTLIDT 16 (221)
T ss_pred ceEEEEeCCCCCcCC
Confidence 578999999999984
No 252
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=69.44 E-value=27 Score=37.67 Aligned_cols=98 Identities=18% Similarity=0.231 Sum_probs=65.4
Q ss_pred ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE-EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ-ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
+..|+-=-.=|++-.....|.++.+.+.. ++.++. .+.|+ +. +++.+++.+.+.++ ||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~---gn--~~Yi~~V~~~~~~l---F~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA---NN--QAYIEEVRQAGLAL---FGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC---CC--HHHHHHHHHHHHHh---cCcc---cE
Confidence 33333334578888888888888766432 232322 23332 11 45667777777654 6532 47
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCCC-cCCCccce
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCVR-DGMNLVPY 440 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~-EG~nLv~~ 440 (755)
..+++.++.+|+.++++.+|+.++.--| +|+|..++
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l 245 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL 245 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH
Confidence 7788999999999999999999988764 88887753
No 253
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=69.27 E-value=2.9 Score=42.35 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=13.3
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.|+|+||+||||++.
T Consensus 1 ~k~viFD~DGTL~d~ 15 (224)
T TIGR02254 1 YKTLLFDLDDTILDF 15 (224)
T ss_pred CCEEEEcCcCccccc
Confidence 478999999999984
No 254
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=67.75 E-value=2.8 Score=43.78 Aligned_cols=15 Identities=20% Similarity=0.472 Sum_probs=13.5
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.++|+||+||||++.
T Consensus 2 ~k~viFD~DGTLiDs 16 (253)
T TIGR01422 2 IEAVIFDWAGTTVDF 16 (253)
T ss_pred ceEEEEeCCCCeecC
Confidence 579999999999984
No 255
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=66.69 E-value=3.1 Score=42.57 Aligned_cols=16 Identities=38% Similarity=0.603 Sum_probs=14.1
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
..+.|++|+||||++.
T Consensus 3 ~~~~iiFDlDGTL~Ds 18 (220)
T COG0546 3 MIKAILFDLDGTLVDS 18 (220)
T ss_pred CCCEEEEeCCCccccC
Confidence 4689999999999984
No 256
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=65.82 E-value=4.5 Score=42.76 Aligned_cols=18 Identities=11% Similarity=0.353 Sum_probs=15.4
Q ss_pred ccCceEEEecCCCcCCCC
Q 004411 582 KTNSRLILLDYDGTVMPQ 599 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~ 599 (755)
....++|+|||||||++.
T Consensus 21 ~~~~k~vIFDlDGTLvDS 38 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVED 38 (260)
T ss_pred cCCceEEEEeCCCceeCC
Confidence 346899999999999974
No 257
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=65.48 E-value=4 Score=41.51 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=14.2
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.++|+||+||||++.
T Consensus 3 ~~~~viFD~DGTL~d~ 18 (221)
T PRK10563 3 QIEAVFFDCDGTLVDS 18 (221)
T ss_pred CCCEEEECCCCCCCCC
Confidence 4789999999999984
No 258
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=65.05 E-value=5.3 Score=39.34 Aligned_cols=13 Identities=31% Similarity=0.685 Sum_probs=11.6
Q ss_pred EEEecCCCcCCCC
Q 004411 587 LILLDYDGTVMPQ 599 (755)
Q Consensus 587 lI~lD~DGTL~~~ 599 (755)
+|+||+||||++.
T Consensus 2 ~viFDlDGTL~ds 14 (184)
T TIGR01993 2 VWFFDLDNTLYPH 14 (184)
T ss_pred eEEEeCCCCCCCC
Confidence 6899999999984
No 259
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=64.60 E-value=3.5 Score=43.51 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=22.0
Q ss_pred HHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 610 VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 610 ~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.++|+.|.+ .+..++|+||.+...+...+.
T Consensus 106 ~~elL~~L~~-~g~~l~I~T~~~~~~~~~~l~ 136 (267)
T PRK13478 106 VLEVIAALRA-RGIKIGSTTGYTREMMDVVVP 136 (267)
T ss_pred HHHHHHHHHH-CCCEEEEEcCCcHHHHHHHHH
Confidence 3456677775 377888888888887766654
No 260
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=64.05 E-value=3 Score=42.95 Aligned_cols=15 Identities=40% Similarity=0.791 Sum_probs=13.3
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.+.|+||+||||++.
T Consensus 12 ~k~viFD~DGTL~Ds 26 (229)
T PRK13226 12 PRAVLFDLDGTLLDS 26 (229)
T ss_pred CCEEEEcCcCccccC
Confidence 478999999999984
No 261
>PRK09449 dUMP phosphatase; Provisional
Probab=63.19 E-value=3.8 Score=41.72 Aligned_cols=15 Identities=33% Similarity=0.426 Sum_probs=13.3
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
+.|.|+||+||||++
T Consensus 2 ~~k~iiFDlDGTLid 16 (224)
T PRK09449 2 KYDWILFDADETLFH 16 (224)
T ss_pred CccEEEEcCCCchhc
Confidence 368999999999996
No 262
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=62.50 E-value=5.9 Score=38.78 Aligned_cols=26 Identities=15% Similarity=0.308 Sum_probs=17.6
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhc
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCN 619 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~ 619 (755)
+|+||+||||++.. +.....++++++
T Consensus 1 ~iiFD~DGTL~ds~-------~~~~~~~~~~~~ 26 (185)
T TIGR01990 1 AVIFDLDGVITDTA-------EYHYLAWKALAD 26 (185)
T ss_pred CeEEcCCCccccCh-------HHHHHHHHHHHH
Confidence 48999999999842 344455555554
No 263
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=60.84 E-value=6.9 Score=39.01 Aligned_cols=14 Identities=21% Similarity=0.458 Sum_probs=12.6
Q ss_pred eEEEecCCCcCCCC
Q 004411 586 RLILLDYDGTVMPQ 599 (755)
Q Consensus 586 rlI~lD~DGTL~~~ 599 (755)
|+|+||+||||++.
T Consensus 2 k~viFD~dgTLiD~ 15 (198)
T TIGR01428 2 KALVFDVYGTLFDV 15 (198)
T ss_pred cEEEEeCCCcCccH
Confidence 68999999999984
No 264
>PRK14986 glycogen phosphorylase; Provisional
Probab=60.35 E-value=1.4e+02 Score=36.70 Aligned_cols=136 Identities=12% Similarity=0.078 Sum_probs=85.6
Q ss_pred CceEEEEeccccccCChHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004411 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~ 400 (755)
+..+++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-...++ ..-.++-+.|.+++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY-YMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999998888777 777766663 4566532 235566555443333 3334666788888888886422223
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004411 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (755)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (755)
.-.|+|+. ...-.--..++.+|||-.-+|. .++| |||+++-+. + -.|+|-+|..-|+-.
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~E--ASGTsnMK~--a----------lNGaLtlgtlDG~nv 679 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTE--ASGTSNMKF--A----------LNGALTIGTLDGANV 679 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCcc--ccCcchhhH--H----------hcCceeeeccCCchh
Confidence 33588886 4556666678999999877775 5667 455543221 1 136788888878655
Q ss_pred cc
Q 004411 481 SL 482 (755)
Q Consensus 481 ~l 482 (755)
++
T Consensus 680 Ei 681 (815)
T PRK14986 680 EM 681 (815)
T ss_pred HH
Confidence 44
No 265
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=60.10 E-value=5.3 Score=40.71 Aligned_cols=33 Identities=12% Similarity=0.194 Sum_probs=23.8
Q ss_pred HHHHHHHH-HHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 608 TEVLSILN-DLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 608 ~~~~~~L~-~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.+.+.|+ .+.+ .|..++|||+.....++.+..
T Consensus 97 pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~ 130 (210)
T TIGR01545 97 PLVAERLRQYLES-SDADIWLITGSPQPLVEAVYF 130 (210)
T ss_pred ccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHH
Confidence 45566664 5554 488899999998888877764
No 266
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=59.45 E-value=17 Score=37.07 Aligned_cols=21 Identities=29% Similarity=0.562 Sum_probs=17.3
Q ss_pred hccCceEEEecCCCcCCCCCC
Q 004411 581 NKTNSRLILLDYDGTVMPQTS 601 (755)
Q Consensus 581 ~~s~~rlI~lD~DGTL~~~~~ 601 (755)
+.+.+.|+++|+|-|++.+++
T Consensus 9 ~~~~ril~~FDFD~TIid~dS 29 (256)
T KOG3120|consen 9 SSSPRILLVFDFDRTIIDQDS 29 (256)
T ss_pred ccCCcEEEEEecCceeecCCc
Confidence 345788999999999998764
No 267
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=58.73 E-value=23 Score=39.04 Aligned_cols=176 Identities=18% Similarity=0.253 Sum_probs=94.6
Q ss_pred Ccccc----ccChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhh
Q 004411 565 GPEFR----KLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (755)
Q Consensus 565 ~~~f~----~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f 640 (755)
.|+|. -|+..+|..--+..+-+|+-||=|+||-.+. ..-.++..++.-|-+|-+ .+..|.|||--++....+|.
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~DG-~sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYEDG-ASLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCcccccCC-CCCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 45664 2455555555444578999999999999865 222345556665555554 38999999988887655543
Q ss_pred c----------C---C-----CCc-eEEcCCceEEEecCC----------CceeEcccCcCccHH-HHHHHHHHH-----
Q 004411 641 S----------G---V-----EKL-GLSAEHGYFTRWSKN----------SAWEICSLTRDFDWK-EIAEPVMKL----- 685 (755)
Q Consensus 641 ~----------~---i-----~~l-~liaenGa~i~~~~~----------~~w~~~~~~~~~~w~-~~v~~i~~~----- 685 (755)
. . + .++ .+-+|.-+..+...+ ..|.. +.-..|. +.+.++|+.
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L 277 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAAL 277 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHH
Confidence 2 1 1 122 355666676666432 24542 2224563 455555532
Q ss_pred --Hhc--CCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhc------CCCeEEEec--CeEEEEEe
Q 004411 686 --YTE--TTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA------NEPVVVKRG--QHIVEVKP 747 (755)
Q Consensus 686 --y~~--~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~------~~~~~V~sG--~~~VEV~p 747 (755)
... ..| +-|-.|+-++-.-- .....+..+|.+|+.-.++..+. .-++...-| +-||||=.
T Consensus 278 ~~~~~~l~Lp-a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd 349 (408)
T PF06437_consen 278 RDCVKRLNLP-ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD 349 (408)
T ss_pred HHHHHHcCCC-eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC
Confidence 221 344 55667776654421 11112233455554433333332 134555543 45677643
No 268
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.52 E-value=34 Score=37.76 Aligned_cols=115 Identities=7% Similarity=0.013 Sum_probs=77.3
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCC---CcCC---CccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCV---RDGM---NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~---~EG~---nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (755)
+.+++...+...+...|+.-|+.+.=+. -++. +.-..|+++|+ |+++.+--.|
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~---------------------~~liT~~~~~ 297 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG---------------------GFLITDYWKD 297 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC---------------------CccccccHHH
Confidence 4555444455778888888888764433 2333 78889999995 4666655555
Q ss_pred cccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 478 CSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 478 ~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
.-.-+. |--++--.|..++.+.+...+.-+ +||++..+.+++.|. .|+-..=+..++..+..
T Consensus 298 ~e~~f~pgk~~iv~~d~kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 298 LEKFFKPGKDIIVYQDSKDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HHHhcCCchheEEecCHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 444443 323333468999999999999976 488888889888885 46666656556665554
No 269
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=56.68 E-value=4.1e+02 Score=31.68 Aligned_cols=27 Identities=7% Similarity=0.390 Sum_probs=24.4
Q ss_pred HHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 416 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
-..++++||+++++| |.+.+|++.++.
T Consensus 482 ~~~~m~aaD~aLaaS-----GTaTLEaAL~g~ 508 (608)
T PRK01021 482 RYELMRECDCALAKC-----GTIVLETALNQT 508 (608)
T ss_pred hHHHHHhcCeeeecC-----CHHHHHHHHhCC
Confidence 468999999999999 899999999976
No 270
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=56.53 E-value=8.2 Score=36.10 Aligned_cols=48 Identities=21% Similarity=0.158 Sum_probs=38.4
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
.+.++++|++. ....-+++.+.|+.|.+ ...|+|+||-.+.++.+...
T Consensus 17 ~~~~v~~tiat----gGklf~ev~e~iqeL~d--~V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT----GGKLFSEVSETIQELHD--MVDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc----CcEEcHhhHHHHHHHHH--hheEEEecCCcchHHHHHHH
Confidence 46788999986 23344688899999996 38899999999999988875
No 271
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=53.86 E-value=4.7 Score=40.52 Aligned_cols=27 Identities=11% Similarity=0.215 Sum_probs=0.0
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
|+||+||||++ ......+....+++++
T Consensus 1 iiFDlDGTL~D---s~~~~~~~~~~~~~~~ 27 (205)
T TIGR01454 1 VVFDLDGVLVD---SFAVMREAFAIAYREV 27 (205)
T ss_pred CeecCcCcccc---CHHHHHHHHHHHHHHh
No 272
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=53.72 E-value=4.4 Score=46.50 Aligned_cols=15 Identities=27% Similarity=0.607 Sum_probs=13.1
Q ss_pred ceEEEecCCCcCCCC
Q 004411 585 SRLILLDYDGTVMPQ 599 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~ 599 (755)
.+.++||+||||++.
T Consensus 241 ~k~vIFDlDGTLiDs 255 (459)
T PRK06698 241 LQALIFDMDGTLFQT 255 (459)
T ss_pred hhheeEccCCceecc
Confidence 478999999999983
No 273
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=53.40 E-value=6.1 Score=40.07 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.+.+.++|+.|.+. ..++|+||-....++.....+
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHc
Confidence 3567788889988873 489999999999888877654
No 274
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=52.77 E-value=6.5 Score=37.35 Aligned_cols=12 Identities=50% Similarity=0.814 Sum_probs=0.0
Q ss_pred EEEecCCCcCCC
Q 004411 587 LILLDYDGTVMP 598 (755)
Q Consensus 587 lI~lD~DGTL~~ 598 (755)
+|++|+||||++
T Consensus 1 ~iifD~DGTL~d 12 (154)
T TIGR01549 1 AILFDIDGTLVD 12 (154)
T ss_pred CeEecCCCcccc
No 275
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=52.19 E-value=7.2 Score=39.29 Aligned_cols=14 Identities=21% Similarity=0.864 Sum_probs=12.7
Q ss_pred ceEEEecCCCcCCC
Q 004411 585 SRLILLDYDGTVMP 598 (755)
Q Consensus 585 ~rlI~lD~DGTL~~ 598 (755)
.+.|+|||||||++
T Consensus 2 ik~viFDldGtL~d 15 (211)
T TIGR02247 2 IKAVIFDFGGVLLP 15 (211)
T ss_pred ceEEEEecCCceec
Confidence 46899999999998
No 276
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=51.98 E-value=23 Score=32.67 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=29.4
Q ss_pred HHHHHhCCCCCEEEEeCCcc-chHHHHHHhhcCCCeEEEEEec
Q 004411 182 KVMEVINPDEDYVWIHDYHL-MVLPSFLRKRFHRVKVGFFLHS 223 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl-~llp~~lr~~~~~~~i~~flH~ 223 (755)
++++..+| |+||+|.... .+++.++++.....|+.++.|-
T Consensus 68 k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 68 KIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 45555566 9999999875 5667777665555899999993
No 277
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=51.79 E-value=6.7 Score=38.15 Aligned_cols=13 Identities=23% Similarity=0.416 Sum_probs=11.3
Q ss_pred EEEecCCCcCCCC
Q 004411 587 LILLDYDGTVMPQ 599 (755)
Q Consensus 587 lI~lD~DGTL~~~ 599 (755)
+|+||+||||++.
T Consensus 1 ~viFD~DGTL~D~ 13 (175)
T TIGR01493 1 AMVFDVYGTLVDV 13 (175)
T ss_pred CeEEecCCcCccc
Confidence 4799999999984
No 278
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=50.65 E-value=75 Score=29.79 Aligned_cols=71 Identities=20% Similarity=0.290 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004411 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (755)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (755)
..+.++..+.+++. +..+.||.|-..+|.. .+....+.+.++++..+|+. ||.++.+..+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFGV----PVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHH
Confidence 45677777777764 3366789888766654 34456788888888877764 79999988888888877766
Q ss_pred C
Q 004411 423 A 423 (755)
Q Consensus 423 A 423 (755)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 279
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=49.99 E-value=40 Score=30.20 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDV 378 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~ 378 (755)
..|...++++++.+|+.+ +|.||.....+.+-|
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY 81 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIY 81 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHH
Confidence 588899999999999987 888887655554334
No 280
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=49.26 E-value=24 Score=34.84 Aligned_cols=69 Identities=19% Similarity=0.292 Sum_probs=49.0
Q ss_pred ccccChHHHHHHhhccCceEEEecCCCcCCCCCC------------------------------CCCCCCHHHHHHHHHH
Q 004411 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS------------------------------EDKRPSTEVLSILNDL 617 (755)
Q Consensus 568 f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~------------------------------~~~~p~~~~~~~L~~L 617 (755)
..-.++.+|.+....-+.-.+-||+|-|++=..+ +.-.++.++...|-.+
T Consensus 46 ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~M 125 (237)
T COG3700 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHH
Confidence 3346778888887766666778899999873221 0124567777777667
Q ss_pred hcCCCCcEEEEcCCChhhH
Q 004411 618 CNDPKNAVFIVSGRGKDSL 636 (755)
Q Consensus 618 ~~d~~~~V~IvSGR~~~~L 636 (755)
....|..++.+|||.....
T Consensus 126 Hq~RGD~i~FvTGRt~gk~ 144 (237)
T COG3700 126 HQRRGDAIYFVTGRTPGKT 144 (237)
T ss_pred HHhcCCeEEEEecCCCCcc
Confidence 7667899999999997643
No 281
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=46.06 E-value=13 Score=41.53 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=47.0
Q ss_pred ccCceEEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCc
Q 004411 582 KTNSRLILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHG 653 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenG 653 (755)
+...+++++|+|||++...-. .-.-+..+.++..++..+ |..+.-.|.|++-.+...-.. +..|.+||
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rN-GYkI~YltsR~~Gqa~sTrsy---lrnieQng 447 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRN-GYKIKYLTSRSYGQADSTRSY---LRNIEQNG 447 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccC-ceEEEEEecccccchhhhhhH---HHhhhhcC
Confidence 356789999999999973210 112234566666777643 567777888988766444332 44667888
Q ss_pred eEEEe
Q 004411 654 YFTRW 658 (755)
Q Consensus 654 a~i~~ 658 (755)
+.+-.
T Consensus 448 ykLpd 452 (580)
T COG5083 448 YKLPD 452 (580)
T ss_pred ccCCC
Confidence 76643
No 282
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=45.79 E-value=8.6 Score=38.62 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=0.0
Q ss_pred EEecCCCcCCC
Q 004411 588 ILLDYDGTVMP 598 (755)
Q Consensus 588 I~lD~DGTL~~ 598 (755)
|+||+||||++
T Consensus 1 viFD~DGTL~D 11 (213)
T TIGR01449 1 VLFDLDGTLVD 11 (213)
T ss_pred CeecCCCcccc
No 283
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=45.30 E-value=17 Score=38.80 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=42.4
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.-.+++|-||.|..- ..+-+.+.++|+.|.+. +..++++|-++..+.+.++...
T Consensus 20 ~~~DtfifDcDGVlW~g----~~~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWLG----EKPIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred hhcCEEEEcCCcceeec----CCCCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHHH
Confidence 34678999999999862 23446777778888875 5788999999988888777644
No 284
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=45.19 E-value=2.3e+02 Score=34.85 Aligned_cols=136 Identities=10% Similarity=0.051 Sum_probs=84.8
Q ss_pred CceEEEEeccccccCChHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004411 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~ 400 (755)
+..+++.+-|+..-|-..+ .|.-++++. ..+|+.. ..+++|..|-...++ ..-.++-+.|..+++.||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY-YMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHhccChhcCC
Confidence 5577888999999888777 666655553 3466532 235566555443333 2334667788888888886522233
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004411 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (755)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (755)
+-.|+|+. ...-.--..++.+|||-.-+| +.++| |||+++-+. + -.|+|.+|..-|+-.
T Consensus 608 ~lkVVFle-nY~VslAe~iipaaDvseqis------~ag~E--ASGTsnMK~--~----------lNGaltlgtlDGanv 666 (797)
T cd04300 608 KLKVVFLP-NYNVSLAEKIIPAADLSEQIS------TAGKE--ASGTGNMKF--M----------LNGALTIGTLDGANV 666 (797)
T ss_pred ceEEEEeC-CCChHHHHHhhhhhhhhhhCC------CCCcc--ccCCchhhH--H----------hcCceeeecccchhH
Confidence 34588886 445555667899999976666 45677 465543221 1 136788887777654
Q ss_pred cc
Q 004411 481 SL 482 (755)
Q Consensus 481 ~l 482 (755)
++
T Consensus 667 Ei 668 (797)
T cd04300 667 EI 668 (797)
T ss_pred HH
Confidence 44
No 285
>COG4996 Predicted phosphatase [General function prediction only]
Probab=44.51 E-value=36 Score=31.95 Aligned_cols=55 Identities=18% Similarity=0.058 Sum_probs=35.1
Q ss_pred eEEEecCCCcCCCCCCCC--C-------------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 586 RLILLDYDGTVMPQTSED--K-------------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~--~-------------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
++|++|.||||.+..... . ..-+.+++.|+.+.. .|..+-.+|=+-.+-.-+-+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn-sG~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN-SGYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh-CCcEEEEeecCchHHHHHHHH
Confidence 589999999998754110 0 112567777777774 466666777766665444444
No 286
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=43.66 E-value=27 Score=41.21 Aligned_cols=65 Identities=8% Similarity=0.150 Sum_probs=51.3
Q ss_pred HHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCC-CcEEEEcCCChhhHHhhhcCC
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK-NAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~-~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.....+.+++..||+++..-.....+-+++.+.|+.|.+. + ..++|+||......+.....+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~-g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA-GGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc-CCCeEEEEeCCCHHHHHHHHHHh
Confidence 4455566788999999988763323456789999999999864 7 899999999999988887654
No 287
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=43.60 E-value=2e+02 Score=30.46 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=24.3
Q ss_pred CEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCC
Q 004411 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP 226 (755)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP 226 (755)
|++.--.....++..++++.+.+.+++ ||--|
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vV---qI~~P 103 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVV---QIQDP 103 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEE---EeeCC
Confidence 777778888899999999998775444 55445
No 288
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=43.15 E-value=1.2e+02 Score=28.68 Aligned_cols=70 Identities=19% Similarity=0.270 Sum_probs=48.7
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004411 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (755)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (755)
+..+.++.++++ +..++||.|...+|.. .+....+.+.++++..+++. ||.+..+..+..+-...|..+.
T Consensus 43 ~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~~~ 112 (138)
T PRK00109 43 WDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFGL----PVVLVDERLSTVEAERALADVG 112 (138)
T ss_pred HHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHHcC
Confidence 566666666653 3467789888766544 34456777788888777653 7999998888888777776543
No 289
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=43.09 E-value=13 Score=37.57 Aligned_cols=18 Identities=33% Similarity=0.495 Sum_probs=15.2
Q ss_pred cCceEEEecCCCcCCCCC
Q 004411 583 TNSRLILLDYDGTVMPQT 600 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~ 600 (755)
+..|.|++|+||||.+..
T Consensus 2 ~~~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 2 MMIKAILFDLDGTLLDFD 19 (229)
T ss_pred CceeEEEEecCCcccccc
Confidence 357899999999999853
No 290
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=42.02 E-value=59 Score=33.63 Aligned_cols=61 Identities=16% Similarity=0.315 Sum_probs=39.2
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC--CChhhHHhhhc
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG--RGKDSLGNWFS 641 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG--R~~~~L~~~f~ 641 (755)
+..++++.|...-..+++.|.|||+... +...++++++++..... +.++| |+.+.+++++.
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~--------~~n~~~i~~i~~~~~~p-v~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGK--------PKNLDVVKNIIRETGLK-VQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCC--------cchHHHHHHHHhhCCCC-EEEcCCCCCHHHHHHHHH
Confidence 6677888887765679999999999652 12345556665432222 44444 55677777765
No 291
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=41.17 E-value=13 Score=36.53 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=18.5
Q ss_pred HHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 612 SILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 612 ~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.|+.+.+ .+..|+|+||-....++....
T Consensus 96 e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~ 124 (192)
T PF12710_consen 96 ELIRELKD-NGIKVVIVSGSPDEIIEPIAE 124 (192)
T ss_dssp HHHHHHHH-TTSEEEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHH-CCCEEEEECCCcHHHHHHHHH
Confidence 55555544 367777777777776666654
No 292
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=40.83 E-value=3.6e+02 Score=30.39 Aligned_cols=96 Identities=10% Similarity=0.086 Sum_probs=59.6
Q ss_pred cCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc------
Q 004411 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS------ 481 (755)
Q Consensus 408 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------ 481 (755)
...+|+.+ ++..||+++-. -|+|.+ .|++..|. |+|+ +..+.++
T Consensus 289 ~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gv---------------------P~vv--~P~~~DQ~~nA~r 338 (406)
T COG1819 289 ADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGV---------------------PLVV--IPDGADQPLNAER 338 (406)
T ss_pred ecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCC---------------------CEEE--ecCCcchhHHHHH
Confidence 34566654 88899999864 588876 48888764 3333 2222333
Q ss_pred ---cCCcEE--eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 482 ---LSGAIR--VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 482 ---l~~ai~--VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
+.-|+. ..+++.+.++++++++|+++. -+++.+++++-..+++...=+...+
T Consensus 339 ve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~l 395 (406)
T COG1819 339 VEELGAGIALPFEELTEERLRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLL 395 (406)
T ss_pred HHHcCCceecCcccCCHHHHHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHH
Confidence 222444 457999999999999999653 3334455666666665544333333
No 293
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=40.63 E-value=21 Score=39.42 Aligned_cols=83 Identities=28% Similarity=0.342 Sum_probs=49.8
Q ss_pred cCceEEEecCCCcCCCCCCC--------C-CCCCHHHHHHHHHHhcCCCCcEEEEcCCC-----hhh-------HHhhhc
Q 004411 583 TNSRLILLDYDGTVMPQTSE--------D-KRPSTEVLSILNDLCNDPKNAVFIVSGRG-----KDS-------LGNWFS 641 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~--------~-~~p~~~~~~~L~~L~~d~~~~V~IvSGR~-----~~~-------L~~~f~ 641 (755)
-..|.|++||||||..-.+. + ....++.-+-|++|.++ |...+|.|-.. .-. ++..++
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~-g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~a 151 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQD-GIKLFIFTNQNGIARGKLELEEFKKKIKAIVA 151 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccC-CeEEEEEecccccccCcchHHHHHHHHHHHHH
Confidence 35789999999999975431 1 12235566778888875 88887766322 212 333333
Q ss_pred CC--CCceEEcCCceEEEecCCCceeE
Q 004411 642 GV--EKLGLSAEHGYFTRWSKNSAWEI 666 (755)
Q Consensus 642 ~i--~~l~liaenGa~i~~~~~~~w~~ 666 (755)
.+ |=.-++|..+-.+|.|-.+.|+.
T Consensus 152 nl~vPi~~~~A~~~~~yRKP~tGMwe~ 178 (422)
T KOG2134|consen 152 NLGVPIQLLAAIIKGKYRKPSTGMWEF 178 (422)
T ss_pred hcCCceEEeeeccCCcccCcchhHHHH
Confidence 32 32236666666777765556653
No 294
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=40.60 E-value=11 Score=36.46 Aligned_cols=13 Identities=38% Similarity=0.705 Sum_probs=11.2
Q ss_pred EEEecCCCcCCCC
Q 004411 587 LILLDYDGTVMPQ 599 (755)
Q Consensus 587 lI~lD~DGTL~~~ 599 (755)
.+++|+||||++.
T Consensus 1 ~vlFDlDgtLv~~ 13 (183)
T TIGR01509 1 AILFDLDGVLVDT 13 (183)
T ss_pred CeeeccCCceech
Confidence 3789999999984
No 295
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=40.17 E-value=3e+02 Score=28.20 Aligned_cols=45 Identities=29% Similarity=0.365 Sum_probs=25.6
Q ss_pred eEEEeCCCCcccccC--C---cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 004411 469 VIIVSEFIGCSPSLS--G---AIRVNPWNVDAVADAMDSALQMENQEKILRHEK 517 (755)
Q Consensus 469 ~lV~Se~~G~~~~l~--~---ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 517 (755)
|++.-|-+|+.--+. | .+=|+|.+--++|.||+-.+ +|.+.|.++
T Consensus 187 Pii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~ 236 (259)
T KOG2884|consen 187 PIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQER 236 (259)
T ss_pred ceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHH
Confidence 555555444433331 1 35678888778998887433 455555553
No 296
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=40.03 E-value=28 Score=34.97 Aligned_cols=35 Identities=11% Similarity=0.196 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
.++.+.++...|.+ .+.+|+++||-=+..+...-.
T Consensus 89 lT~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~ 123 (227)
T KOG1615|consen 89 LTPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAE 123 (227)
T ss_pred cCCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHH
Confidence 45677888888887 489999999987776655544
No 297
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=39.22 E-value=16 Score=36.61 Aligned_cols=14 Identities=14% Similarity=0.328 Sum_probs=12.5
Q ss_pred eEEEecCCCcCCCC
Q 004411 586 RLILLDYDGTVMPQ 599 (755)
Q Consensus 586 rlI~lD~DGTL~~~ 599 (755)
++|+||+||||++.
T Consensus 1 ~~viFDldgvL~d~ 14 (199)
T PRK09456 1 MLYIFDLGNVIVDI 14 (199)
T ss_pred CEEEEeCCCccccC
Confidence 47999999999985
No 298
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=37.29 E-value=13 Score=35.39 Aligned_cols=11 Identities=45% Similarity=0.909 Sum_probs=0.0
Q ss_pred EEecCCCcCCC
Q 004411 588 ILLDYDGTVMP 598 (755)
Q Consensus 588 I~lD~DGTL~~ 598 (755)
|+||+||||++
T Consensus 1 iifD~dgtL~d 11 (176)
T PF13419_consen 1 IIFDLDGTLVD 11 (176)
T ss_dssp EEEESBTTTEE
T ss_pred cEEECCCCcEe
No 299
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=36.38 E-value=57 Score=34.27 Aligned_cols=67 Identities=19% Similarity=0.299 Sum_probs=44.2
Q ss_pred hHHHHHHhhcc-CceEEEecCCCcCCCCC-CC----------------------------------------CCCCCHHH
Q 004411 573 MHHIASAYNKT-NSRLILLDYDGTVMPQT-SE----------------------------------------DKRPSTEV 610 (755)
Q Consensus 573 ~~~i~~~y~~s-~~rlI~lD~DGTL~~~~-~~----------------------------------------~~~p~~~~ 610 (755)
+++|.+..... ..-|+++|+|-||+... +. .....+++
T Consensus 7 ~~eV~~~~~~~~~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~ 86 (252)
T PF11019_consen 7 FHEVQDYLENADQDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDV 86 (252)
T ss_pred HHHHHHHHHcCCCCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhH
Confidence 44554444444 67899999999998532 00 01134566
Q ss_pred HHHHHHHhcCCCCcEEEEcCCChhhHHhhh
Q 004411 611 LSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (755)
Q Consensus 611 ~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f 640 (755)
.++++.|.+ .+.+|+..|.|+.......+
T Consensus 87 ~~~i~~lq~-~~~~v~alT~~~~~~~~~t~ 115 (252)
T PF11019_consen 87 PNIINSLQN-KGIPVIALTARGPNMEDWTL 115 (252)
T ss_pred HHHHHHHHH-CCCcEEEEcCCChhhHHHHH
Confidence 788899886 58999999999965433333
No 300
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=35.55 E-value=6.7e+02 Score=28.02 Aligned_cols=80 Identities=13% Similarity=0.172 Sum_probs=39.2
Q ss_pred CcEEEEEEecCCCCCc--hhHHHHHHHHHHHHHHHhccc-CCCCCccEEEec-CCCChhhHHHHHHhCcEEEEcCCCcCC
Q 004411 360 GKVVLVQITNPARSSG--KDVQDLLSDTNRIAEEINLNF-GKPGYEPIVIIK-EPLSTQDKVPYYAIAECCVVNCVRDGM 435 (755)
Q Consensus 360 ~~vvLvqi~~p~r~~~--~~~~~l~~~i~~lv~~In~~~-g~~~~~pV~~~~-~~v~~~el~aly~~ADv~vvtS~~EG~ 435 (755)
+++.|++.++|-.-.| ...++| ..+.+|+.+-|..- ...=++++++.+ .+++..-+..-+ +-.++.++|-.-+|
T Consensus 157 ~~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~-a~~~it~~saSKtF 234 (388)
T COG1168 157 ERVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF-ADNSITLTSASKTF 234 (388)
T ss_pred CCccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh-hcceEEEeeccccc
Confidence 3456778888875433 343443 34555555433221 112245555544 344444333333 22344556666677
Q ss_pred Ccccee
Q 004411 436 NLVPYK 441 (755)
Q Consensus 436 nLv~~E 441 (755)
||.-+.
T Consensus 235 NlaGL~ 240 (388)
T COG1168 235 NLAGLK 240 (388)
T ss_pred cchhhh
Confidence 766443
No 301
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=35.43 E-value=4.1e+02 Score=28.99 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCceEEEEeccccccCChHH-HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 324 DGKIVILGVDDMDLFKGISL-KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
.++.+++..|--...|--+. .+.++.+.|.+. .++ ++++|+|.- .+. ...+++++.++. .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~~----vvl~ggp~e---~e~----~~~~~i~~~~~~-------~ 242 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GYE----VVLTSGPDK---DDL----ACVNEIAQGCQT-------P 242 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CCe----EEEEcCCCh---HHH----HHHHHHHHhcCC-------C
Confidence 34667778876667777653 444444444432 333 455665431 111 122333332211 1
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+++-+.+..+..|+.++++.||++|-+-
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEecC
Confidence 3444667889999999999999998664
No 302
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=35.15 E-value=27 Score=37.55 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=27.8
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK 622 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~ 622 (755)
.--|+||+||.|.. .+.|-++..++|+.|.+++|
T Consensus 35 ~fgfafDIDGVL~R----G~~~i~~~~~Alr~L~~~~g 68 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFR----GHRPIPGALKALRRLVDNQG 68 (389)
T ss_pred ceeEEEecccEEEe----cCCCCcchHHHHHHHHhcCC
Confidence 44699999999997 55677899999999997643
No 303
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=34.71 E-value=1.3e+02 Score=32.09 Aligned_cols=81 Identities=20% Similarity=0.148 Sum_probs=50.6
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
.++.+++++|-.+.. ..+++ ++..|+++ ++.+|.+. .+. +-+ .
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~----l~~~~~~~----~~v~g~~~----~~~----------------~~~-----n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEA----LKALPDYQ----FIVFGPNA----ADP----------------RPG-----N 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHH----HHhCCCCe----EEEEcCCc----ccc----------------cCC-----C
Confidence 467899999988766 33333 44467665 55554321 000 001 3
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
|.+. ..+..++..++..||++|-.+ |+|. ..|++++|.
T Consensus 234 i~~~--~~~~~~~~~~m~~ad~vIs~~---G~~t-~~Ea~~~g~ 271 (318)
T PF13528_consen 234 IHVR--PFSTPDFAELMAAADLVISKG---GYTT-ISEALALGK 271 (318)
T ss_pred EEEe--ecChHHHHHHHHhCCEEEECC---CHHH-HHHHHHcCC
Confidence 5543 344578999999999998764 6664 459999975
No 304
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=33.56 E-value=21 Score=35.51 Aligned_cols=29 Identities=24% Similarity=0.273 Sum_probs=19.5
Q ss_pred eEEEecCCCcCCCCCCCCCCC----CHHHHHHHHHH
Q 004411 586 RLILLDYDGTVMPQTSEDKRP----STEVLSILNDL 617 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~~p----~~~~~~~L~~L 617 (755)
++|+||.||||+... ... ...+...+..+
T Consensus 2 ~~i~fDktGTLt~~~---~~v~~~~~~~~~~~~~~~ 34 (215)
T PF00702_consen 2 DAICFDKTGTLTQGK---MSVAPPSNEAALAIAAAL 34 (215)
T ss_dssp SEEEEECCTTTBESH---HEEESCSHHHHHHHHHHH
T ss_pred eEEEEecCCCcccCe---EEEEeccHHHHHHHHHHh
Confidence 689999999998732 222 35555666555
No 305
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=33.12 E-value=1.7e+02 Score=32.25 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 420 (755)
++..++|.+++.+++ .+ +++.+.++. +.+++.+. .+.++.++. +...+|
T Consensus 185 lP~~~~aa~~L~~~~--~~----~~i~~a~~~------~~i~~~~~-------------~~~~~~~~~------~~~~~m 233 (347)
T PRK14089 185 MPIFKELAKKLEGKE--KI----LVVPSFFKG------KDLKEIYG-------------DISEFEISY------DTHKAL 233 (347)
T ss_pred HHHHHHHHHHHhhcC--cE----EEEeCCCcH------HHHHHHHh-------------cCCCcEEec------cHHHHH
Q ss_pred HhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeC----------------CCCcccccCC
Q 004411 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE----------------FIGCSPSLSG 484 (755)
Q Consensus 421 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se----------------~~G~~~~l~~ 484 (755)
+.||+++..| |.+.+|++.++.+ .+|.-. +.|..-.+-+
T Consensus 234 ~~aDlal~~S-----GT~TLE~al~g~P--------------------~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~ 288 (347)
T PRK14089 234 LEAEFAFICS-----GTATLEAALIGTP--------------------FVLAYKAKAIDYFIAKMFVKLKHIGLANIFFD 288 (347)
T ss_pred HhhhHHHhcC-----cHHHHHHHHhCCC--------------------EEEEEeCCHHHHHHHHHHHcCCeeehHHHhcC
Q ss_pred cE---------EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHH
Q 004411 485 AI---------RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (755)
Q Consensus 485 ai---------~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (755)
-+ +-+-.+++.+++++.+ ...+..+......++........+.++..++
T Consensus 289 ~~~~~~vvPEllQ~~~t~~~la~~i~~---~~~~~~~~~~~~l~~~l~~~a~~~~A~~i~~ 346 (347)
T PRK14089 289 FLGKEPLHPELLQEFVTVENLLKAYKE---MDREKFFKKSKELREYLKHGSAKNVAKILKE 346 (347)
T ss_pred CCcccccCchhhcccCCHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCHHHHHHHHHhc
No 306
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=31.46 E-value=47 Score=39.23 Aligned_cols=61 Identities=10% Similarity=0.158 Sum_probs=48.3
Q ss_pred ccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
....+.+.++.||+++..-.....+.+++.++|++|.+. +..++++||......+.....+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~-Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR-GIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHc
Confidence 345678999999998753223445778999999999874 8899999999999988888754
No 307
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=31.07 E-value=2.9e+02 Score=33.73 Aligned_cols=130 Identities=12% Similarity=0.105 Sum_probs=85.1
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCC-CCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHP-DLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P-~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
+..+++.+-|+..-|-..+.+.=..++...-- ++..++.+|..|-...++ ..-.++-+.+.+.++.||.+- .
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y-~~aK~iIk~I~~~a~~in~~l------k 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPAD-YAAKEIIKLINDVADVINNKL------K 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcc-hHHHHHHHHHHHHHHhhcccc------e
Confidence 46788999999998887776666666554333 555667666555433323 223466778888888888742 4
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
|+|+. +.+-.--..++.+|||-..+|+ .++| |||+++-+. + -.|.+-+|..-|+-.++
T Consensus 559 VvFl~-nYdvslA~~iipa~Dvweqis~------a~~E--ASGTsnMK~--a----------lNGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLP-NYDVSLAELLIPAADVWEQIPT------AGKE--ASGTSNMKA--A----------LNGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeC-CCChhHHHhhcccccccccCCC------CCcc--ccCcCcchH--H----------hcCCceeeccccHHHHH
Confidence 88885 4444545568999999777765 5677 566654322 1 13688888888876554
No 308
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=30.48 E-value=2.8e+02 Score=34.04 Aligned_cols=136 Identities=11% Similarity=0.050 Sum_probs=83.0
Q ss_pred CceEEEEeccccccCChHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004411 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~ 400 (755)
+...++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-...++ ..-.++-+.|..+++.||..=...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY-HMAKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc-HHHHHHHHHHHHHHHHhccChhhCC
Confidence 4566788999998887776 666655553 3456541 235566555443333 2334566788888888886522223
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004411 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (755)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (755)
.-.|+|+. ...-.--..++.+|||-.-+|. .++| |||+++-+. + -.|+|-+|..-|+-.
T Consensus 605 ~lkVVFle-nY~VslAe~iipaaDvseqist------ag~E--ASGTsnMK~--a----------lNGaltlgtlDGanv 663 (794)
T TIGR02093 605 KLKVVFVP-NYNVSLAELIIPAADLSEQIST------AGKE--ASGTGNMKF--M----------LNGALTIGTLDGANV 663 (794)
T ss_pred ceeEEEeC-CCChHHHHHhhhhhhhhhhCCC------CCcc--ccCcchhHH--H----------hcCcceeecccchhH
Confidence 33588885 4555556678999999766664 5667 465543221 1 136777777766544
Q ss_pred cc
Q 004411 481 SL 482 (755)
Q Consensus 481 ~l 482 (755)
++
T Consensus 664 Ei 665 (794)
T TIGR02093 664 EI 665 (794)
T ss_pred HH
Confidence 43
No 309
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=30.13 E-value=2.8e+02 Score=34.09 Aligned_cols=136 Identities=14% Similarity=0.100 Sum_probs=83.6
Q ss_pred CceEEEEeccccccCChHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004411 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~ 400 (755)
+..+++.+-|+..-|-..+ .|...+++. ..+|+.. ..+++|..|-...++ ..-.++-+.|..+++.||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhcCChhhCC
Confidence 4466778999998887776 666655553 3467632 235566555443333 2334566788888888875422223
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004411 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (755)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (755)
.-.|+|+. ...-.--..++.+|||-.-+| +.++| |||+++-+. + -.|+|-+|..-|+-.
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis------~ag~E--ASGTsnMK~--a----------mNGaLtlgtlDGanv 665 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIS------TAGKE--ASGTGNMKL--A----------LNGALTVGTLDGANV 665 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCC------CCCcc--ccCcchhHH--H----------hcCceeeecccchHH
Confidence 33588885 455566667899999976666 45677 465543221 1 136788888777644
Q ss_pred cc
Q 004411 481 SL 482 (755)
Q Consensus 481 ~l 482 (755)
++
T Consensus 666 Ei 667 (798)
T PRK14985 666 EI 667 (798)
T ss_pred HH
Confidence 43
No 310
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=28.16 E-value=25 Score=44.74 Aligned_cols=16 Identities=25% Similarity=0.490 Sum_probs=13.9
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.+.++|||||||++.
T Consensus 74 ~ikaVIFDlDGTLiDS 89 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNS 89 (1057)
T ss_pred CCCEEEECCCCCeEeC
Confidence 3688999999999984
No 311
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=28.07 E-value=66 Score=37.95 Aligned_cols=76 Identities=17% Similarity=0.250 Sum_probs=48.4
Q ss_pred cCceEEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh---HHhhhcCCCCceEEcC
Q 004411 583 TNSRLILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS---LGNWFSGVEKLGLSAE 651 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~---L~~~f~~i~~l~liae 651 (755)
-..|+|+.|+|||++...-- ..--...+.++..++.++ |.+++-+|.|..-. -+.|+..+..=|-+--
T Consensus 528 Wn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N-GYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LP 606 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN-GYKILYLSARAIGQADSTRQYLKNVEQDGKKLP 606 (738)
T ss_pred cCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC-CeeEEEEehhhhhhhHHHHHHHHHHhhcCccCC
Confidence 35689999999999873311 112246788889999975 89999999998763 3445544322223333
Q ss_pred CceEEEec
Q 004411 652 HGYFTRWS 659 (755)
Q Consensus 652 nGa~i~~~ 659 (755)
.|=.+.-|
T Consensus 607 dGPViLSP 614 (738)
T KOG2116|consen 607 DGPVILSP 614 (738)
T ss_pred CCCEEeCC
Confidence 44444433
No 312
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=27.85 E-value=1.6e+02 Score=30.57 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=39.9
Q ss_pred cChHHHHHHhhccC-ceEEEecC--CCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC--CChhhHHhhhc
Q 004411 571 LGMHHIASAYNKTN-SRLILLDY--DGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG--RGKDSLGNWFS 641 (755)
Q Consensus 571 l~~~~i~~~y~~s~-~rlI~lD~--DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG--R~~~~L~~~f~ 641 (755)
.+..+.++.+.... ..+|++|+ |||+.. ++-++++.+.+.. ..-++++| |+.+.+.+.+.
T Consensus 148 ~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G-------~~~~li~~l~~~~----~ipvi~~GGi~s~edi~~l~~ 212 (234)
T PRK13587 148 LNLFSFVRQLSDIPLGGIIYTDIAKDGKMSG-------PNFELTGQLVKAT----TIPVIASGGIRHQQDIQRLAS 212 (234)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccCcCCCCc-------cCHHHHHHHHHhC----CCCEEEeCCCCCHHHHHHHHH
Confidence 45566777776654 67888888 799865 3344444443322 23478888 88889998885
No 313
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=27.32 E-value=54 Score=34.12 Aligned_cols=58 Identities=19% Similarity=0.349 Sum_probs=41.8
Q ss_pred ccCceEEEecCCCcCCCCCCC-----------------------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh-HH
Q 004411 582 KTNSRLILLDYDGTVMPQTSE-----------------------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS-LG 637 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~-----------------------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~-L~ 637 (755)
+-+.+.|++|+|-|+++..+. ...+-+...+.|+=.-+ .|..|+-+|-|..+. ..
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQENEKD 154 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhcccc
Confidence 345679999999999974421 12445677888877665 489999999999886 43
Q ss_pred hhh
Q 004411 638 NWF 640 (755)
Q Consensus 638 ~~f 640 (755)
...
T Consensus 155 ~T~ 157 (274)
T COG2503 155 GTI 157 (274)
T ss_pred hhH
Confidence 333
No 314
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=26.06 E-value=99 Score=37.36 Aligned_cols=69 Identities=4% Similarity=0.018 Sum_probs=53.0
Q ss_pred HHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 574 HHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 574 ~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
++.++.+.+...+.+++-+|++++..-.....+-+++.+.+++|.+ .|.+++++||............+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc
Confidence 4445566666778888888988775322344567899999999997 48999999999999988887654
No 315
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=25.29 E-value=1.1e+03 Score=27.36 Aligned_cols=102 Identities=5% Similarity=0.009 Sum_probs=57.7
Q ss_pred ecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC---ccccc-
Q 004411 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG---CSPSL- 482 (755)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G---~~~~l- 482 (755)
+.+.+|+.++.+- ..+++||- +-|+| ...||+.+|.+ .|++--++- .+..+
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~GvP--------------------~v~iP~~~DQ~~Na~rv~ 404 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDALVP--------------------MVGLPMMGDQFYNTNKYV 404 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHcCCC--------------------EEECCCCccHHHHHHHHH
Confidence 4567888765432 45677663 45655 55799999752 223222221 12222
Q ss_pred --CCcEEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh------cCHHHHHHHHH
Q 004411 483 --SGAIRVNP--WNVDAVADAMDSALQMENQEKILRHEKHYKYISS------HDVAYWAKSID 535 (755)
Q Consensus 483 --~~ai~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~------~~~~~W~~~~l 535 (755)
+.|+.+++ .+.+++++||.++|+.+. -+++.++..+.++. ..+.+|.+..+
T Consensus 405 ~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~--y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 405 ELGIGRALDTVTVSAAQLVLAIVDVIENPK--YRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred HcCcEEEeccCCcCHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 12677765 467999999999998743 23333344444432 34566776543
No 316
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=24.90 E-value=3.5e+02 Score=31.58 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=64.4
Q ss_pred EEEeccccccCChHHHHHHHHHHHH-hCCCCCCc--EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004411 329 ILGVDDMDLFKGISLKFLAMGQLLE-QHPDLRGK--VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (755)
Q Consensus 329 il~VdRld~~KGi~~~l~A~~~ll~-~~P~~~~~--vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~ 405 (755)
++++.+--.-|-+..+|-|+..+.. .+..-+++ .+|| -.|+| ||..++.+.+.++....+ . ..+
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLV--L~PTR-------ELA~QV~~~~~~~~~~~~---~-~~~ 197 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLV--LAPTR-------ELAVQVQAEAREFGKSLR---L-RST 197 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEE--EcCcH-------HHHHHHHHHHHHHcCCCC---c-cEE
Confidence 7889999999999999999999987 33333333 4554 45764 677777777777654433 2 234
Q ss_pred EecCCCC-hhhHHHHHHhCcEEEEcCCC
Q 004411 406 IIKEPLS-TQDKVPYYAIAECCVVNCVR 432 (755)
Q Consensus 406 ~~~~~v~-~~el~aly~~ADv~vvtS~~ 432 (755)
+++|..| ..++..+=+.+||++-|+-|
T Consensus 198 cvyGG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 198 CVYGGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred EEeCCCCccHHHHHHhcCCcEEEeCChH
Confidence 4555444 67899999999999999854
No 317
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=24.87 E-value=1e+02 Score=33.23 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=44.3
Q ss_pred hhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc------c---CC
Q 004411 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS------L---SG 484 (755)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------l---~~ 484 (755)
+++.++|..||+++..+ |++ +..|++++|. |+|+.-+.|-.++ + +-
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g~---------------------P~l~ip~~~~~eQ~~na~~l~~~g~ 293 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLGK---------------------PLIVIPDLGQFEQGNNAVKLEDLGC 293 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcCC---------------------CEEEEcCCCcccHHHHHHHHHHCCC
Confidence 78999999999999876 555 4789999975 4555555553332 2 12
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCC
Q 004411 485 AIRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~ 507 (755)
|+.++..+. ++.+++...++++
T Consensus 294 ~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 294 GIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred EEEcChhhH-HHHHHHHhccccc
Confidence 667776666 4444555544443
No 318
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=23.90 E-value=82 Score=29.76 Aligned_cols=70 Identities=19% Similarity=0.358 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc-CCCCCccEEEecCCCChhhHHHHHH
Q 004411 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF-GKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~-g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+..+.++++++ ++..+.||.|...+|.+. +....+.+.++++..+| +. ||.+..+..+..+-...+.
T Consensus 38 ~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~~-~~~~~v~~f~~~L~~~~~~i----pV~~~DEr~TT~~A~~~l~ 107 (135)
T PF03652_consen 38 KDIEELKKLIEEY-----QIDGIVVGLPLNMDGSES-EQARRVRKFAEELKKRFPGI----PVILVDERLTTKEAERRLR 107 (135)
T ss_dssp CCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC--CCHHHHHHHHHHHHHHH-TS----EEEEEECSCSHHCCHCCHH
T ss_pred hHHHHHHHHHHHh-----CCCEEEEeCCcccCCCcc-HHHHHHHHHHHHHHHhcCCC----cEEEECCChhHHHHHHHHH
Confidence 4455666777765 244677898876655442 33456666777776666 43 7999988888777666554
Q ss_pred h
Q 004411 422 I 422 (755)
Q Consensus 422 ~ 422 (755)
.
T Consensus 108 ~ 108 (135)
T PF03652_consen 108 E 108 (135)
T ss_dssp H
T ss_pred H
Confidence 3
No 319
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=23.55 E-value=4.4e+02 Score=31.43 Aligned_cols=76 Identities=18% Similarity=0.267 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
+..|+.+.++|++-|+-+ |+...-|.-++ + .+...+... |.. -..|+|.. -...+|=..-+.
T Consensus 773 P~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~----rf~ty~~~~----Gl~-p~riifs~-va~k~eHvrr~~ 834 (966)
T KOG4626|consen 773 PSTLQMWANILKRVPNSV----LWLLRFPAVGE----Q----RFRTYAEQL----GLE-PDRIIFSP-VAAKEEHVRRGQ 834 (966)
T ss_pred HHHHHHHHHHHHhCCcce----eEEEeccccch----H----HHHHHHHHh----CCC-ccceeecc-ccchHHHHHhhh
Confidence 567899999999999876 77777776433 2 233333333 321 11255432 344677788899
Q ss_pred hCcEEEEcCCCcCC
Q 004411 422 IAECCVVNCVRDGM 435 (755)
Q Consensus 422 ~ADv~vvtS~~EG~ 435 (755)
.||||+-|++.-|-
T Consensus 835 LaDv~LDTplcnGh 848 (966)
T KOG4626|consen 835 LADVCLDTPLCNGH 848 (966)
T ss_pred hhhhcccCcCcCCc
Confidence 99999999987664
No 320
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=23.22 E-value=5.4e+02 Score=28.56 Aligned_cols=157 Identities=15% Similarity=0.138 Sum_probs=100.2
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc-ccCCCCCcc
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL-NFGKPGYEP 403 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~-~~g~~~~~p 403 (755)
++++-++=--++-.|.=..=+.+.|+.-+..|+.- ..+.|++.-. .++- .+...++.+++. +.|.
T Consensus 189 ~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v---~~~~V~Nt~~--~ke~----~~F~~f~~~ldlvr~gk----- 254 (364)
T PF10933_consen 189 GKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAV---EHVYVTNTYH--LKEH----PTFVNFANSLDLVRDGK----- 254 (364)
T ss_pred CceEEEecCCceEEeecCccHHHHHHHHHhChhhc---ceEEEecchh--hhcC----HHHHHHHHhhHHhhcCe-----
Confidence 34555555555556665556677788888899875 3556666432 1222 233344444443 3343
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
--+.+..+..+..+=| +|++|.--.--|+|-.-+|++..|= |||- -|+.+.
T Consensus 255 -asfegR~~~p~fla~~--tD~VvSHqWeN~lNYlY~daLyggY---------------------PLVH-----NS~~l~ 305 (364)
T PF10933_consen 255 -ASFEGRFDFPDFLAQH--TDAVVSHQWENPLNYLYYDALYGGY---------------------PLVH-----NSPLLK 305 (364)
T ss_pred -eEEeeecChHHHHHhC--CCEEEeccccchhhHHHHHHHhcCC---------------------Cccc-----Ccchhc
Confidence 2244555566665555 6998888888999999999888532 5554 445554
Q ss_pred -CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh
Q 004411 484 -GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (755)
Q Consensus 484 -~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (755)
-|+.-+-.|..+=|+++.+|+..-+.....-.++.++++.+
T Consensus 306 d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~ 347 (364)
T PF10933_consen 306 DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDR 347 (364)
T ss_pred ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 47888889999999999999987665555544555555543
No 321
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=22.67 E-value=1e+02 Score=37.85 Aligned_cols=66 Identities=6% Similarity=0.082 Sum_probs=51.5
Q ss_pred HHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 577 ~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
++.+.....+.+++=+||+++..-.....+-++..+.|++|.+ .+..++++||......+.....+
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc
Confidence 3456666778888889998875222334567899999999997 48999999999999999888764
No 322
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=22.34 E-value=4.1e+02 Score=27.75 Aligned_cols=84 Identities=21% Similarity=0.208 Sum_probs=46.7
Q ss_pred CceEEEEeccccccCChH--HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 325 GKIVILGVDDMDLFKGIS--LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~--~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
++.+++..+.-...|..+ ...+..+.+ .+. +++ +++++.|. + .+ ..+++.+.+ +..
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l-~~~-~~~----ivl~g~~~-----e-~~---~~~~i~~~~----~~~--- 178 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRL-LAR-GAR----VVLTGGPA-----E-RE---LAEEIAAAL----GGP--- 178 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHH-HHC-CCE----EEEEechh-----h-HH---HHHHHHHhc----CCC---
Confidence 445666776656666654 344444444 433 443 55566432 1 11 223333222 110
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+++.+.+..+..|+.++++.||+++-+-
T Consensus 179 ~~~~~~~~~~l~e~~~li~~~~l~I~~D 206 (279)
T cd03789 179 RVVNLAGKTSLRELAALLARADLVVTND 206 (279)
T ss_pred ccccCcCCCCHHHHHHHHHhCCEEEeeC
Confidence 2344556778999999999999999774
No 323
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=21.79 E-value=1.4e+02 Score=31.54 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=36.5
Q ss_pred eEEEecCCCcCCCCCCC-----------------------CCCCCHHHHHHHHHHhc-----CCCCcEEEEcCCChhhHH
Q 004411 586 RLILLDYDGTVMPQTSE-----------------------DKRPSTEVLSILNDLCN-----DPKNAVFIVSGRGKDSLG 637 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~-----------------------~~~p~~~~~~~L~~L~~-----d~~~~V~IvSGR~~~~L~ 637 (755)
-=|++|.||+|..+.+. ..-|-..++..|.+|.+ ++..+++|||-|+-..-+
T Consensus 122 lRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~ 201 (264)
T PF06189_consen 122 LRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHE 201 (264)
T ss_pred eEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhH
Confidence 34899999999986531 12344677777777764 235667899999866434
Q ss_pred hhh
Q 004411 638 NWF 640 (755)
Q Consensus 638 ~~f 640 (755)
+.+
T Consensus 202 RvI 204 (264)
T PF06189_consen 202 RVI 204 (264)
T ss_pred HHH
Confidence 433
No 324
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=21.73 E-value=2.2e+02 Score=29.57 Aligned_cols=62 Identities=15% Similarity=0.288 Sum_probs=39.8
Q ss_pred ChHHHHHHhhc-c-CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC-CChhhHHhhhc
Q 004411 572 GMHHIASAYNK-T-NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG-RGKDSLGNWFS 641 (755)
Q Consensus 572 ~~~~i~~~y~~-s-~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG-R~~~~L~~~f~ 641 (755)
+..++++.|.. . -..+.++|+||+.... +...++++++++..+..+.+-=| |+.+.++++|.
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~~--------~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~~~l~ 96 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQH--------AREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFA 96 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccCC--------cchHHHHHHHHhhcCCeEEEcCCcCCHHHHHHHHH
Confidence 45668888887 4 4889999999997542 24455666666533334433333 56666777775
No 325
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=21.73 E-value=2.1e+02 Score=27.71 Aligned_cols=40 Identities=28% Similarity=0.444 Sum_probs=30.1
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
..++|++|..|.-.+ |+++.+.|+.+..+ |-.+.++=|-+
T Consensus 67 ~~~vi~Ld~~Gk~~s--------Se~fA~~l~~~~~~-G~~i~f~IGG~ 106 (155)
T COG1576 67 GSYVVLLDIRGKALS--------SEEFADFLERLRDD-GRDISFLIGGA 106 (155)
T ss_pred CCeEEEEecCCCcCC--------hHHHHHHHHHHHhc-CCeEEEEEeCc
Confidence 459999999998776 79999999999976 44444444433
No 326
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=20.74 E-value=74 Score=34.34 Aligned_cols=39 Identities=26% Similarity=0.596 Sum_probs=30.9
Q ss_pred eCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHH
Q 004411 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSAN 176 (755)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN 176 (755)
|++.+.+-..|..|+|. +|+.... ..|+.++|.+|...+
T Consensus 272 ~~s~~~L~dlY~~~~k~--yPivSiE--------DPFdqdDw~~w~~~~ 310 (433)
T KOG2670|consen 272 WLSGDQLADLYKSFIKD--YPIVSIE--------DPFDQDDWEAWSKFF 310 (433)
T ss_pred ccCHHHHHHHHHHHHhc--CCeeeec--------CCcchhhHHHHHHHh
Confidence 68899999999999998 6773221 359999999999655
No 327
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=20.61 E-value=70 Score=30.29 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=28.6
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
.-+=++|+||.++.-.+.......++++. +.+ -|..|+|+|--.
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~---I~~-~G~PviVAtDV~ 86 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEW---ISE-YGKPVIVATDVS 86 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHH---HHH-cCCEEEEEecCC
Confidence 34567999999997554444444455544 444 377899998654
No 328
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=20.52 E-value=1.4e+02 Score=37.91 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 604 KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 604 ~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
..|-+++.++++++.+ .|..|+++|||...........+
T Consensus 567 Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred CCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 4567899999999997 59999999999999998887643
No 329
>cd03309 CmuC_like CmuC_like. Proteins similar to the putative corrinoid methyltransferase CmuC. Its function has been inferred from sequence similarity to the methyltransferases CmuA and MtaA. Mutants of Methylobacterium sp. disrupted in cmuC and purU appear deficient in some step of chloromethane metabolism.
Probab=20.36 E-value=7.7e+02 Score=26.86 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Q 004411 170 QAYLSANKVFADKVMEVINPDEDYVWIHDY 199 (755)
Q Consensus 170 ~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDy 199 (755)
+.-..++..|+++.++.+. -|+|++||-
T Consensus 151 d~ltd~~i~y~~~qiea~G--ad~I~i~Dd 178 (321)
T cd03309 151 DYLTDAKLKLYERRIKHLE--PDLLVYHDD 178 (321)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEeCC
Confidence 3444556677777766543 489999883
No 330
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=20.17 E-value=1.4e+02 Score=30.60 Aligned_cols=46 Identities=17% Similarity=0.328 Sum_probs=31.8
Q ss_pred EEecCCCcCCCCCCCC-----------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 588 ILLDYDGTVMPQTSED-----------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~-----------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
+.+|++|++....+.. .....++.+.|+++.+|++...+++.+.+.
T Consensus 1 l~i~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~ 57 (222)
T cd07018 1 LVLDLSGSLVEQPPPSPPLLLGGGESSELSLRDLLEALEKAAEDDRIKGIVLDLDGL 57 (222)
T ss_pred CEEcCCCcccccCCCCChhhhccCCcCCccHHHHHHHHHHHhcCCCeEEEEEECCCC
Confidence 3678899987644211 122367888889998888888887776553
Done!