Query 004413
Match_columns 755
No_of_seqs 671 out of 4471
Neff 9.0
Searched_HMMs 29240
Date Tue Mar 26 00:27:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.5E-30 8.5E-35 308.0 22.8 248 1-248 397-719 (768)
2 1ogq_A PGIP-2, polygalacturona 100.0 5.8E-31 2E-35 279.3 15.2 246 1-248 53-306 (313)
3 3rgz_A Protein brassinosteroid 100.0 2E-30 6.7E-35 308.8 18.8 247 1-247 272-552 (768)
4 4eco_A Uncharacterized protein 100.0 2E-29 6.8E-34 293.5 14.5 240 2-246 85-446 (636)
5 1ogq_A PGIP-2, polygalacturona 100.0 5.4E-29 1.9E-33 264.1 11.7 225 1-227 79-307 (313)
6 4ecn_A Leucine-rich repeat pro 100.0 3.1E-28 1.1E-32 288.8 16.7 240 2-246 327-686 (876)
7 4eco_A Uncharacterized protein 99.9 4.5E-28 1.5E-32 282.1 15.4 241 1-247 209-502 (636)
8 3v47_A TOLL-like receptor 5B a 99.9 3E-27 1E-31 264.3 20.8 136 1-136 33-172 (455)
9 3v47_A TOLL-like receptor 5B a 99.9 5.6E-27 1.9E-31 262.1 21.0 248 1-248 57-386 (455)
10 4fcg_A Uncharacterized protein 99.9 9.1E-27 3.1E-31 248.5 20.9 208 21-233 80-298 (328)
11 2id5_A Lingo-1, leucine rich r 99.9 1E-26 3.5E-31 261.7 21.7 248 1-248 35-311 (477)
12 3t6q_A CD180 antigen; protein- 99.9 2.6E-26 8.8E-31 266.5 25.5 245 1-246 36-338 (606)
13 4ecn_A Leucine-rich repeat pro 99.9 9.1E-27 3.1E-31 276.2 18.2 240 1-247 451-742 (876)
14 1xku_A Decorin; proteoglycan, 99.9 1.3E-25 4.3E-30 240.1 23.5 219 2-227 56-278 (330)
15 1ozn_A Reticulon 4 receptor; N 99.9 2.9E-26 9.8E-31 239.8 16.7 225 2-229 15-242 (285)
16 4fcg_A Uncharacterized protein 99.9 1.5E-25 5.1E-30 239.1 21.0 220 1-225 84-314 (328)
17 2z66_A Variable lymphocyte rec 99.9 9.5E-26 3.3E-30 238.4 18.4 243 2-248 11-263 (306)
18 2ft3_A Biglycan; proteoglycan, 99.9 3E-25 1E-29 237.5 22.0 217 2-226 58-278 (332)
19 2z66_A Variable lymphocyte rec 99.9 6.4E-26 2.2E-30 239.7 15.9 227 1-228 31-264 (306)
20 3o6n_A APL1; leucine-rich repe 99.9 2E-25 6.9E-30 244.3 20.3 256 1-261 48-344 (390)
21 3t6q_A CD180 antigen; protein- 99.9 1.7E-25 5.6E-30 259.7 20.7 247 1-248 281-538 (606)
22 3zyi_A Leucine-rich repeat-con 99.9 3E-25 1E-29 247.9 22.1 242 2-248 58-305 (452)
23 3oja_B Anopheles plasmodium-re 99.9 2.2E-25 7.6E-30 257.7 21.7 255 2-261 55-350 (597)
24 3oja_B Anopheles plasmodium-re 99.9 3.4E-25 1.2E-29 256.2 22.8 244 1-248 78-360 (597)
25 3zyj_A Leucine-rich repeat-con 99.9 3.6E-25 1.2E-29 246.4 22.1 242 2-248 47-294 (440)
26 1ozn_A Reticulon 4 receptor; N 99.9 3.8E-25 1.3E-29 231.3 20.8 221 25-248 14-240 (285)
27 2id5_A Lingo-1, leucine rich r 99.9 3.9E-25 1.3E-29 248.8 22.0 243 2-248 15-263 (477)
28 2z7x_B TOLL-like receptor 1, v 99.9 2.4E-25 8.2E-30 253.3 20.5 104 1-107 24-128 (520)
29 2z7x_B TOLL-like receptor 1, v 99.9 2.8E-25 9.5E-30 252.8 20.9 255 1-261 48-449 (520)
30 2z81_A CD282 antigen, TOLL-lik 99.9 1.5E-25 5E-30 256.9 18.7 156 1-156 29-210 (549)
31 3zyi_A Leucine-rich repeat-con 99.9 2.6E-25 8.8E-30 248.4 20.2 225 1-227 78-305 (452)
32 3vq2_A TLR4, TOLL-like recepto 99.9 3.3E-25 1.1E-29 257.1 21.1 136 1-136 35-171 (606)
33 3vq2_A TLR4, TOLL-like recepto 99.9 2.3E-25 8E-30 258.4 19.6 243 1-247 59-438 (606)
34 1ziw_A TOLL-like receptor 3; i 99.9 1.1E-24 3.7E-29 256.4 25.0 233 1-233 28-293 (680)
35 3zyj_A Leucine-rich repeat-con 99.9 4.8E-25 1.6E-29 245.4 20.7 224 1-226 67-293 (440)
36 3j0a_A TOLL-like receptor 5; m 99.9 6.1E-25 2.1E-29 264.2 22.9 244 1-246 51-394 (844)
37 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 8.4E-25 2.9E-29 251.3 22.0 105 1-108 55-160 (562)
38 1xku_A Decorin; proteoglycan, 99.9 2.3E-24 8E-29 230.3 23.8 236 1-243 79-329 (330)
39 1wwl_A Monocyte differentiatio 99.9 7.6E-26 2.6E-30 239.8 11.6 238 2-247 47-310 (312)
40 1ziw_A TOLL-like receptor 3; i 99.9 2.6E-24 8.7E-29 253.1 24.3 247 1-247 52-343 (680)
41 3j0a_A TOLL-like receptor 5; m 99.9 4.7E-25 1.6E-29 265.2 17.8 242 1-247 269-540 (844)
42 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 1.4E-24 4.9E-29 249.3 20.9 255 1-261 79-478 (562)
43 2ft3_A Biglycan; proteoglycan, 99.9 3.5E-24 1.2E-28 229.1 21.5 235 1-243 81-330 (332)
44 1wwl_A Monocyte differentiatio 99.9 4.6E-26 1.6E-30 241.5 6.8 221 2-226 67-310 (312)
45 2z81_A CD282 antigen, TOLL-lik 99.9 6.3E-25 2.2E-29 251.6 15.5 132 1-132 53-210 (549)
46 2z80_A TOLL-like receptor 2, v 99.9 9.7E-25 3.3E-29 235.5 15.8 221 2-226 35-263 (353)
47 2z80_A TOLL-like receptor 2, v 99.9 2.4E-25 8.2E-30 240.3 10.9 246 1-248 55-316 (353)
48 4g8a_A TOLL-like receptor 4; l 99.9 6E-24 2.1E-28 247.5 22.5 130 1-130 55-185 (635)
49 3o6n_A APL1; leucine-rich repe 99.9 5.1E-24 1.8E-28 233.1 20.5 244 1-248 72-354 (390)
50 2z63_A TOLL-like receptor 4, v 99.9 3.6E-24 1.2E-28 246.4 19.2 175 1-176 31-210 (570)
51 2z63_A TOLL-like receptor 4, v 99.9 1E-23 3.4E-28 242.7 19.8 136 1-136 55-195 (570)
52 3bz5_A Internalin-J, INLJ; leu 99.9 4.2E-23 1.4E-27 230.1 22.9 222 1-246 67-299 (457)
53 3rfs_A Internalin B, repeat mo 99.9 6.3E-24 2.1E-28 220.4 15.1 218 5-233 26-243 (272)
54 1o6v_A Internalin A; bacterial 99.9 6.5E-23 2.2E-27 229.9 24.5 232 2-248 50-302 (466)
55 2z62_A TOLL-like receptor 4, v 99.9 2.2E-23 7.4E-28 216.8 18.4 223 3-229 12-241 (276)
56 2o6q_A Variable lymphocyte rec 99.9 1.1E-22 3.8E-27 210.7 23.2 204 23-229 17-222 (270)
57 4fmz_A Internalin; leucine ric 99.9 1.4E-22 4.8E-27 218.0 23.3 210 1-225 69-278 (347)
58 2z62_A TOLL-like receptor 4, v 99.9 3E-23 1E-27 215.7 17.0 206 1-207 31-241 (276)
59 3bz5_A Internalin-J, INLJ; leu 99.9 4.5E-22 1.5E-26 221.8 25.6 221 1-244 45-265 (457)
60 1jl5_A Outer protein YOPM; leu 99.9 1.1E-22 3.6E-27 226.7 19.6 226 1-246 14-290 (454)
61 4fmz_A Internalin; leucine ric 99.9 3.6E-22 1.2E-26 214.7 22.8 245 1-261 91-338 (347)
62 3oja_A Leucine-rich immune mol 99.9 1.3E-23 4.4E-28 236.4 11.6 210 2-225 38-250 (487)
63 3o53_A Protein LRIM1, AGAP0063 99.9 1.4E-23 4.7E-28 222.9 10.3 219 1-233 37-259 (317)
64 1o6v_A Internalin A; bacterial 99.9 6.2E-22 2.1E-26 221.9 24.1 233 1-247 71-323 (466)
65 2o6q_A Variable lymphocyte rec 99.9 1.1E-21 3.7E-26 203.2 23.9 202 1-205 19-220 (270)
66 1p9a_G Platelet glycoprotein I 99.9 7.3E-22 2.5E-26 206.6 20.6 204 17-227 5-210 (290)
67 4glp_A Monocyte differentiatio 99.9 1.5E-22 5E-27 214.3 15.0 199 46-246 91-307 (310)
68 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-23 4.5E-28 223.1 6.2 233 3-248 15-252 (317)
69 3rfs_A Internalin B, repeat mo 99.9 4.9E-22 1.7E-26 206.1 17.8 199 1-210 44-242 (272)
70 1p9a_G Platelet glycoprotein I 99.9 9.7E-22 3.3E-26 205.7 19.7 197 1-204 13-209 (290)
71 3oja_A Leucine-rich immune mol 99.9 3E-23 1E-27 233.4 7.6 222 14-248 22-252 (487)
72 2xwt_C Thyrotropin receptor; s 99.9 9.5E-22 3.3E-26 199.8 13.8 204 13-223 25-237 (239)
73 4g8a_A TOLL-like receptor 4; l 99.9 4.5E-21 1.5E-25 223.2 20.9 248 1-248 79-582 (635)
74 1h6u_A Internalin H; cell adhe 99.9 3.4E-21 1.2E-25 203.4 17.7 206 5-226 26-231 (308)
75 4glp_A Monocyte differentiatio 99.9 1.3E-21 4.4E-26 207.1 13.1 222 2-226 68-308 (310)
76 3m19_A Variable lymphocyte rec 99.9 1.5E-20 5E-25 192.5 20.5 181 22-205 14-194 (251)
77 2ast_B S-phase kinase-associat 99.9 9E-23 3.1E-27 218.4 3.6 243 1-248 50-308 (336)
78 1jl5_A Outer protein YOPM; leu 99.9 3.8E-20 1.3E-24 206.0 24.8 204 22-247 131-351 (454)
79 3m19_A Variable lymphocyte rec 99.9 1.9E-20 6.6E-25 191.6 20.5 179 46-227 14-194 (251)
80 2xwt_C Thyrotropin receptor; s 99.9 2.4E-21 8.1E-26 196.9 13.5 195 1-201 34-237 (239)
81 2ca6_A RAN GTPase-activating p 99.8 8.8E-23 3E-27 223.0 1.7 236 13-248 23-318 (386)
82 3goz_A Leucine-rich repeat-con 99.8 5.5E-22 1.9E-26 214.7 7.2 246 1-246 1-297 (362)
83 1h6u_A Internalin H; cell adhe 99.8 3.2E-20 1.1E-24 196.0 18.8 188 1-204 44-231 (308)
84 3g06_A SSPH2 (leucine-rich rep 99.8 1.3E-19 4.4E-24 208.2 24.4 218 1-248 43-276 (622)
85 2ca6_A RAN GTPase-activating p 99.8 1.8E-22 6.1E-27 220.6 0.3 229 1-229 35-320 (386)
86 3omv_A RAF proto-oncogene seri 99.8 1.6E-21 5.3E-26 204.0 7.0 100 569-678 198-300 (307)
87 2ast_B S-phase kinase-associat 99.8 1.2E-21 4.1E-26 209.6 5.9 231 1-233 73-314 (336)
88 4gt4_A Tyrosine-protein kinase 99.8 1.3E-21 4.6E-26 205.2 3.6 93 569-676 211-304 (308)
89 4aoj_A High affinity nerve gro 99.8 2.3E-21 7.8E-26 205.5 3.7 96 569-679 224-320 (329)
90 2o6s_A Variable lymphocyte rec 99.8 1.4E-19 4.7E-24 179.6 15.6 178 2-189 11-188 (208)
91 4asz_A BDNF/NT-3 growth factor 99.8 2.5E-21 8.5E-26 202.3 2.4 96 569-679 194-290 (299)
92 3goz_A Leucine-rich repeat-con 99.8 4E-21 1.4E-25 207.9 3.3 232 1-232 25-304 (362)
93 3g06_A SSPH2 (leucine-rich rep 99.8 6.1E-19 2.1E-23 202.6 19.9 216 1-248 64-299 (622)
94 4ay9_X Follicle-stimulating ho 99.8 3.8E-19 1.3E-23 191.4 15.4 223 2-230 13-241 (350)
95 3cvr_A Invasion plasmid antige 99.8 9.4E-19 3.2E-23 198.6 18.0 183 23-233 60-251 (571)
96 3cvr_A Invasion plasmid antige 99.8 1.1E-18 3.6E-23 198.2 18.0 175 47-247 60-244 (571)
97 1z7x_W Ribonuclease inhibitor; 99.8 2.2E-21 7.5E-26 217.0 -4.8 247 1-247 59-355 (461)
98 2o6s_A Variable lymphocyte rec 99.8 1.2E-18 4.1E-23 172.8 15.4 177 25-233 10-186 (208)
99 4ase_A Vascular endothelial gr 99.8 1.5E-20 5.2E-25 200.8 1.2 96 569-678 251-347 (353)
100 1h6t_A Internalin B; cell adhe 99.8 8.5E-19 2.9E-23 183.4 14.2 172 43-226 43-214 (291)
101 1z7x_W Ribonuclease inhibitor; 99.8 4.7E-21 1.6E-25 214.3 -4.1 248 1-248 116-413 (461)
102 1m9s_A Internalin B; cell inva 99.8 2.1E-18 7.1E-23 197.9 15.6 183 5-203 28-210 (605)
103 1h6t_A Internalin B; cell adhe 99.8 5.6E-18 1.9E-22 177.2 16.7 184 5-204 31-214 (291)
104 3hmm_A TGF-beta receptor type- 99.8 1.9E-20 6.6E-25 196.7 -2.9 107 569-679 176-298 (303)
105 2xot_A Amphoterin-induced prot 99.7 2.6E-18 8.9E-23 185.6 11.8 178 24-204 20-203 (361)
106 2v9t_B SLIT homolog 2 protein 99.7 1.5E-17 5.1E-22 166.4 15.4 153 25-180 14-166 (220)
107 4ay9_X Follicle-stimulating ho 99.7 9.3E-18 3.2E-22 180.5 14.7 219 18-242 6-232 (350)
108 2qkw_B Protein kinase; three-h 99.7 3.9E-19 1.3E-23 188.9 3.7 112 569-680 205-317 (321)
109 2xot_A Amphoterin-induced prot 99.7 6.4E-18 2.2E-22 182.5 12.8 177 48-227 20-204 (361)
110 2v70_A SLIT-2, SLIT homolog 2 99.7 2E-17 6.8E-22 165.5 15.2 156 25-183 14-170 (220)
111 1m9s_A Internalin B; cell inva 99.7 1.3E-17 4.5E-22 191.2 14.8 193 21-227 20-212 (605)
112 2v9t_B SLIT homolog 2 protein 99.7 3E-17 1E-21 164.2 15.3 153 49-204 14-166 (220)
113 2v70_A SLIT-2, SLIT homolog 2 99.7 2.6E-17 8.9E-22 164.6 14.9 157 48-207 13-170 (220)
114 3e6j_A Variable lymphocyte rec 99.7 5E-17 1.7E-21 163.7 16.8 156 24-183 21-176 (229)
115 3uim_A Brassinosteroid insensi 99.7 1.8E-18 6.1E-23 184.1 4.5 109 569-677 199-310 (326)
116 3e6j_A Variable lymphocyte rec 99.7 1.9E-16 6.4E-21 159.4 17.8 157 47-207 20-176 (229)
117 4ezg_A Putative uncharacterize 99.7 7E-17 2.4E-21 158.6 13.8 152 43-202 41-193 (197)
118 4ezg_A Putative uncharacterize 99.7 3.5E-17 1.2E-21 160.7 11.2 156 18-180 40-195 (197)
119 1dce_A Protein (RAB geranylger 99.7 6.4E-19 2.2E-23 200.9 -4.2 194 19-219 346-567 (567)
120 4g3f_A NF-kappa-beta-inducing 99.7 3.7E-18 1.3E-22 180.2 0.8 98 569-679 220-317 (336)
121 1xeu_A Internalin C; cellular 99.7 8.3E-17 2.8E-21 165.6 10.8 171 20-205 17-187 (263)
122 4b9d_A Serine/threonine-protei 99.7 4.1E-18 1.4E-22 180.7 0.6 88 569-671 189-276 (350)
123 1xeu_A Internalin C; cellular 99.7 6.7E-17 2.3E-21 166.3 9.6 171 44-227 17-187 (263)
124 2nru_A Interleukin-1 receptor- 99.7 4.7E-17 1.6E-21 171.4 7.5 106 569-677 199-305 (307)
125 1dce_A Protein (RAB geranylger 99.6 2E-18 6.7E-23 196.9 -6.0 189 2-197 353-567 (567)
126 4b8c_D Glucose-repressible alc 99.6 4.8E-17 1.6E-21 191.2 5.2 213 2-226 177-405 (727)
127 3fpq_A Serine/threonine-protei 99.6 6.5E-17 2.2E-21 167.7 5.3 89 569-671 194-282 (290)
128 1w8a_A SLIT protein; signaling 99.6 6.8E-16 2.3E-20 150.8 10.3 130 49-205 11-141 (192)
129 4b8c_D Glucose-repressible alc 99.6 5.9E-17 2E-21 190.5 2.8 191 22-222 173-369 (727)
130 4fih_A Serine/threonine-protei 99.6 9.2E-17 3.2E-21 170.0 3.7 90 569-671 234-323 (346)
131 1w8a_A SLIT protein; signaling 99.6 2.3E-15 8E-20 147.0 12.1 125 2-129 12-137 (192)
132 2ell_A Acidic leucine-rich nuc 99.6 3.3E-15 1.1E-19 142.5 12.5 134 20-179 22-160 (168)
133 2ell_A Acidic leucine-rich nuc 99.6 3E-15 1E-19 142.8 11.1 130 1-132 27-161 (168)
134 2je0_A Acidic leucine-rich nuc 99.6 2.1E-15 7E-20 140.8 9.2 128 21-150 16-148 (149)
135 3hyh_A Carbon catabolite-derep 99.6 1.3E-16 4.5E-21 163.9 1.0 87 569-671 175-262 (275)
136 3ogk_B Coronatine-insensitive 99.6 4.1E-17 1.4E-21 188.4 -3.6 113 62-174 285-411 (592)
137 4fie_A Serine/threonine-protei 99.6 3.5E-16 1.2E-20 169.8 3.5 90 569-671 311-400 (423)
138 3ogk_B Coronatine-insensitive 99.6 4.1E-17 1.4E-21 188.3 -4.5 245 1-247 167-477 (592)
139 2wfh_A SLIT homolog 2 protein 99.6 1.4E-14 4.9E-19 141.4 13.6 127 25-155 13-139 (193)
140 3ubd_A Ribosomal protein S6 ki 99.6 4.4E-16 1.5E-20 162.2 2.5 82 569-666 190-271 (304)
141 3lb7_A RAF proto-oncogene seri 99.6 1.4E-15 4.9E-20 160.2 5.2 101 569-679 198-301 (307)
142 2je0_A Acidic leucine-rich nuc 99.6 5.3E-15 1.8E-19 138.0 8.4 127 46-174 17-148 (149)
143 3poz_A Epidermal growth factor 99.6 7E-16 2.4E-20 164.1 2.4 95 570-679 184-279 (327)
144 3p86_A Serine/threonine-protei 99.5 1.2E-15 4.2E-20 160.9 3.1 101 569-683 203-303 (309)
145 4aw0_A HPDK1, 3-phosphoinositi 99.5 4.6E-16 1.6E-20 162.2 -0.3 86 569-670 198-283 (311)
146 1qcf_A Haematopoetic cell kina 99.5 1.8E-15 6.2E-20 168.5 4.1 95 570-679 350-445 (454)
147 3kul_A Ephrin type-A receptor 99.5 9.5E-16 3.3E-20 163.0 1.6 96 570-680 219-315 (325)
148 2qol_A Ephrin receptor; recept 99.5 7.9E-16 2.7E-20 166.8 0.9 95 570-679 215-310 (373)
149 2o6r_A Variable lymphocyte rec 99.5 8.7E-14 3E-18 133.8 15.0 125 2-129 11-135 (177)
150 2wfh_A SLIT homolog 2 protein 99.5 8.2E-14 2.8E-18 136.0 14.4 127 49-179 13-139 (193)
151 2c30_A Serine/threonine-protei 99.5 3.3E-15 1.1E-19 158.5 4.7 90 569-671 205-294 (321)
152 3cbl_A C-FES, proto-oncogene t 99.5 1.1E-15 3.9E-20 165.9 1.1 93 570-677 280-373 (377)
153 1fmk_A C-SRC, P60-SRC, tyrosin 99.5 3.7E-15 1.3E-19 165.9 4.9 96 570-680 346-442 (452)
154 3sv0_A Casein kinase I-like; t 99.5 3.2E-15 1.1E-19 167.0 3.2 101 570-678 178-278 (483)
155 3og7_A AKAP9-BRAF fusion prote 99.5 9E-15 3.1E-19 152.6 6.4 99 569-677 186-287 (289)
156 1opk_A P150, C-ABL, proto-onco 99.5 4E-15 1.4E-19 167.5 3.8 94 570-678 384-478 (495)
157 3kex_A Receptor tyrosine-prote 99.5 3.7E-15 1.3E-19 158.4 3.1 95 570-679 182-277 (325)
158 2o6r_A Variable lymphocyte rec 99.5 1.5E-13 5E-18 132.2 14.0 133 24-183 9-141 (177)
159 2izr_A Casein kinase I isoform 99.5 9.3E-15 3.2E-19 155.6 5.2 102 569-679 181-282 (330)
160 1csn_A Casein kinase-1; phosph 99.5 4.9E-15 1.7E-19 155.1 3.0 103 569-679 182-284 (298)
161 1k9a_A Carboxyl-terminal SRC k 99.5 4.4E-15 1.5E-19 165.1 2.7 94 569-677 350-444 (450)
162 3lzb_A Epidermal growth factor 99.5 3.8E-15 1.3E-19 158.5 2.1 95 570-679 184-279 (327)
163 2eva_A TAK1 kinase - TAB1 chim 99.5 1.2E-14 4.1E-19 153.1 5.9 99 569-680 167-265 (307)
164 3l9p_A Anaplastic lymphoma kin 99.5 5.2E-15 1.8E-19 160.0 2.6 96 570-680 251-347 (367)
165 2ozo_A Tyrosine-protein kinase 99.5 1.3E-14 4.3E-19 167.5 5.6 94 570-678 504-598 (613)
166 4hgt_A Casein kinase I isoform 99.5 5.3E-15 1.8E-19 154.6 2.1 102 569-679 179-281 (296)
167 3soc_A Activin receptor type-2 99.5 1.8E-15 6.2E-20 160.6 -1.6 105 569-678 197-318 (322)
168 4g31_A Eukaryotic translation 99.5 2.4E-15 8.1E-20 157.2 -0.8 86 569-671 194-279 (299)
169 2h8h_A Proto-oncogene tyrosine 99.5 1.1E-14 3.7E-19 165.5 4.5 95 570-679 429-524 (535)
170 2psq_A Fibroblast growth facto 99.5 8.2E-15 2.8E-19 158.7 3.2 95 570-679 270-365 (370)
171 3uzp_A CKI-delta, CKID, casein 99.5 5E-15 1.7E-19 154.9 1.3 103 569-680 179-282 (296)
172 1mqb_A Ephrin type-A receptor 99.5 9.2E-15 3.2E-19 155.9 3.2 95 570-679 215-310 (333)
173 2y4i_B KSR2, HKSR2, kinase sup 99.5 4.5E-14 1.5E-18 149.4 7.8 100 569-682 198-306 (319)
174 3op5_A Serine/threonine-protei 99.5 8.7E-15 3E-19 158.1 2.2 106 570-680 226-331 (364)
175 3ugc_A Tyrosine-protein kinase 99.5 1E-14 3.5E-19 152.5 2.6 100 571-678 183-291 (295)
176 1ds9_A Outer arm dynein; leuci 99.5 6.2E-16 2.1E-20 151.9 -6.6 135 18-157 14-155 (198)
177 3q4u_A Activin receptor type-1 99.5 6.1E-15 2.1E-19 154.6 0.5 102 569-676 181-300 (301)
178 4fl3_A Tyrosine-protein kinase 99.5 2.2E-14 7.7E-19 165.9 5.2 92 570-676 537-629 (635)
179 3gxj_A TGF-beta receptor type- 99.5 1.3E-14 4.5E-19 152.2 2.9 105 569-679 176-298 (303)
180 1mp8_A Focal adhesion kinase 1 99.5 7.6E-15 2.6E-19 152.5 1.1 94 570-678 182-276 (281)
181 3p1a_A MYT1 kinase, membrane-a 99.5 5.1E-15 1.7E-19 156.3 -0.6 85 569-671 220-304 (311)
182 3dtc_A Mitogen-activated prote 99.4 1.8E-14 6.1E-19 148.6 2.9 93 569-675 178-270 (271)
183 4hcu_A Tyrosine-protein kinase 99.4 9.9E-15 3.4E-19 150.5 1.0 94 570-678 172-266 (269)
184 3c1x_A Hepatocyte growth facto 99.4 1.1E-14 3.9E-19 157.6 1.2 95 570-679 261-356 (373)
185 1a9n_A U2A', U2A'; complex (nu 99.4 9.4E-14 3.2E-18 133.5 7.4 134 18-179 15-153 (176)
186 3cc6_A Protein tyrosine kinase 99.4 2.1E-14 7.1E-19 149.1 3.0 94 570-678 179-273 (281)
187 3sb4_A Hypothetical leucine ri 99.4 1.4E-13 4.7E-18 146.5 9.3 100 117-218 225-327 (329)
188 3sxs_A Cytoplasmic tyrosine-pr 99.4 1.2E-14 4.1E-19 149.7 0.9 94 570-678 170-264 (268)
189 3fxz_A Serine/threonine-protei 99.4 2.7E-14 9.1E-19 149.7 3.4 90 569-671 180-269 (297)
190 1p4o_A Insulin-like growth fac 99.4 8.7E-15 3E-19 155.1 -0.6 94 570-678 205-299 (322)
191 1luf_A Muscle-specific tyrosin 99.4 1.3E-14 4.6E-19 155.1 0.8 95 570-679 241-336 (343)
192 3tt0_A Basic fibroblast growth 99.4 2.3E-14 7.8E-19 155.9 2.6 96 570-680 258-354 (382)
193 3sb4_A Hypothetical leucine ri 99.4 1.8E-13 6E-18 145.6 9.4 84 141-226 225-311 (329)
194 3s95_A LIMK-1, LIM domain kina 99.4 7.1E-15 2.4E-19 155.0 -1.6 97 570-679 187-283 (310)
195 3dbq_A Dual specificity protei 99.4 1.7E-14 6E-19 154.4 1.4 89 569-671 173-273 (343)
196 1xbb_A Tyrosine-protein kinase 99.4 3.2E-14 1.1E-18 148.5 2.9 94 570-678 185-279 (291)
197 4f0f_A Serine/threonine-protei 99.4 2.8E-14 9.6E-19 148.5 2.4 95 569-675 190-286 (287)
198 3gen_A Tyrosine-protein kinase 99.4 1.8E-14 6E-19 149.7 0.8 94 570-678 186-280 (283)
199 4f9c_A Cell division cycle 7-r 99.4 4.8E-14 1.6E-18 151.4 3.9 40 570-609 211-251 (361)
200 3qup_A Tyrosine-protein kinase 99.4 2.1E-14 7.1E-19 152.3 0.9 96 570-680 204-300 (323)
201 2zmd_A Dual specificity protei 99.4 2.2E-14 7.7E-19 156.3 1.1 89 569-671 220-320 (390)
202 1ds9_A Outer arm dynein; leuci 99.4 2.9E-15 9.8E-20 147.1 -5.5 147 2-155 22-185 (198)
203 3kfa_A Tyrosine-protein kinase 99.4 9.4E-15 3.2E-19 152.2 -1.9 94 570-678 177-271 (288)
204 1qpc_A LCK kinase; alpha beta 99.4 6.7E-15 2.3E-19 152.6 -3.4 95 570-679 175-270 (279)
205 4b99_A Mitogen-activated prote 99.4 7.8E-14 2.7E-18 151.4 4.8 99 569-671 226-344 (398)
206 1u59_A Tyrosine-protein kinase 99.4 4.4E-14 1.5E-18 147.2 2.7 98 570-682 178-276 (287)
207 1byg_A CSK, protein (C-termina 99.4 3.7E-14 1.3E-18 146.9 1.8 95 569-678 178-273 (278)
208 3g39_A Variable lymphocyte rec 99.4 1.1E-12 3.8E-17 125.1 11.9 103 25-130 12-114 (170)
209 1a9n_A U2A', U2A'; complex (nu 99.4 2.9E-13 1E-17 130.0 7.8 62 139-202 85-152 (176)
210 3g33_A Cell division protein k 99.4 5.8E-14 2E-18 147.8 3.0 100 569-671 183-296 (308)
211 2wqm_A Serine/threonine-protei 99.4 6.3E-14 2.2E-18 147.6 3.2 101 569-681 200-300 (310)
212 3lxp_A Non-receptor tyrosine-p 99.4 5.2E-15 1.8E-19 156.7 -5.3 102 570-679 202-311 (318)
213 2v62_A Serine/threonine-protei 99.4 1E-13 3.6E-18 148.5 4.7 104 569-677 224-327 (345)
214 2yfx_A Tyrosine-protein kinase 99.4 4E-14 1.4E-18 150.5 1.2 96 570-680 210-306 (327)
215 4eqm_A Protein kinase; transfe 99.4 7E-14 2.4E-18 146.3 2.9 100 569-679 176-276 (294)
216 3kmu_A ILK, integrin-linked ki 99.4 6E-14 2E-18 144.5 2.4 95 569-677 172-269 (271)
217 2p1m_B Transport inhibitor res 99.4 1.8E-14 6.2E-19 166.2 -1.8 243 1-245 187-493 (594)
218 1fvr_A Tyrosine-protein kinase 99.4 6.8E-14 2.3E-18 148.7 2.8 97 569-680 205-302 (327)
219 3t9t_A Tyrosine-protein kinase 99.4 3.3E-14 1.1E-18 146.2 0.3 94 570-678 170-264 (267)
220 2i1m_A Macrophage colony-stimu 99.4 7.1E-14 2.4E-18 148.8 2.7 95 570-678 231-326 (333)
221 2w4o_A Calcium/calmodulin-depe 99.4 8.7E-14 3E-18 149.3 3.4 92 569-671 214-305 (349)
222 3e3p_A Protein kinase, putativ 99.4 2.8E-13 9.4E-18 145.9 7.0 101 569-671 195-314 (360)
223 3mdy_A Bone morphogenetic prot 99.4 6.5E-14 2.2E-18 149.3 2.0 106 569-680 210-333 (337)
224 3pls_A Macrophage-stimulating 99.4 6.4E-14 2.2E-18 146.5 1.9 96 570-679 193-288 (298)
225 3brb_A Proto-oncogene tyrosine 99.4 5.1E-14 1.7E-18 148.6 1.0 94 570-678 214-308 (313)
226 3g2f_A Bone morphogenetic prot 99.4 4.6E-14 1.6E-18 150.5 0.7 110 569-679 192-319 (336)
227 3lm5_A Serine/threonine-protei 99.4 1.3E-13 4.3E-18 146.7 4.0 91 569-671 197-287 (327)
228 2r9u_A Variable lymphocyte rec 99.4 2E-12 6.7E-17 123.9 11.9 104 25-131 15-118 (174)
229 3lxl_A Tyrosine-protein kinase 99.4 1.1E-14 3.7E-19 154.9 -4.4 101 571-679 196-304 (327)
230 2xir_A Vascular endothelial gr 99.4 6E-14 2.1E-18 148.1 1.3 95 570-678 215-310 (316)
231 4fvq_A Tyrosine-protein kinase 99.4 1.2E-13 4.1E-18 143.9 3.4 95 569-679 181-276 (289)
232 1u46_A ACK-1, activated CDC42 99.4 8.4E-14 2.9E-18 145.1 2.2 95 570-678 189-284 (291)
233 2j0j_A Focal adhesion kinase 1 99.4 1E-13 3.4E-18 161.1 2.9 94 570-678 557-651 (656)
234 3fdn_A Serine/threonine-protei 99.4 5.1E-14 1.8E-18 145.9 0.4 87 569-671 171-257 (279)
235 3soa_A Calcium/calmodulin-depe 99.4 2.7E-13 9.2E-18 150.0 6.2 91 569-671 177-267 (444)
236 4aw2_A Serine/threonine-protei 99.4 1.2E-13 4.3E-18 152.2 3.5 92 569-671 240-338 (437)
237 2vx3_A Dual specificity tyrosi 99.4 3.8E-13 1.3E-17 146.2 7.2 42 569-610 222-263 (382)
238 2p1m_B Transport inhibitor res 99.4 4.2E-14 1.4E-18 163.1 -0.6 245 1-247 133-470 (594)
239 1u5q_A Serine/threonine protei 99.4 1.3E-13 4.4E-18 147.9 3.3 89 569-671 214-305 (348)
240 2eue_A Carbon catabolite derep 99.4 7.1E-14 2.4E-18 144.5 1.1 87 569-671 175-262 (275)
241 2ivs_A Proto-oncogene tyrosine 99.4 1.2E-13 4E-18 145.7 2.7 94 570-678 217-311 (314)
242 3zgw_A Maternal embryonic leuc 99.4 5.5E-14 1.9E-18 150.5 -0.1 87 569-671 173-260 (347)
243 3v5w_A G-protein coupled recep 99.4 8.1E-14 2.8E-18 158.3 1.2 89 569-670 354-448 (689)
244 2pvf_A Fibroblast growth facto 99.4 8.8E-14 3E-18 148.3 1.4 95 570-679 224-319 (334)
245 3llt_A Serine/threonine kinase 99.4 1.6E-14 5.5E-19 155.7 -4.4 102 569-671 223-355 (360)
246 3mtl_A Cell division protein k 99.4 1.4E-13 4.7E-18 146.1 2.6 100 569-671 164-281 (324)
247 3fe3_A MAP/microtubule affinit 99.4 6.4E-14 2.2E-18 148.9 0.0 87 569-671 177-264 (328)
248 3uto_A Twitchin; kinase, muscl 99.4 1.2E-13 4.3E-18 157.3 2.4 91 569-671 320-410 (573)
249 2h34_A Serine/threonine-protei 99.4 1.7E-13 5.9E-18 144.3 3.3 99 569-680 199-298 (309)
250 4euu_A Serine/threonine-protei 99.4 3.8E-13 1.3E-17 142.3 5.9 108 569-678 179-309 (319)
251 3h4j_B AMPK kdaid, SNF1-like p 99.4 6.8E-14 2.3E-18 149.1 0.0 87 569-671 171-258 (336)
252 3f66_A Hepatocyte growth facto 99.4 8.3E-14 2.8E-18 145.8 0.7 95 570-679 197-292 (298)
253 1t46_A HOMO sapiens V-KIT hard 99.4 1.6E-13 5.4E-18 144.6 2.8 95 570-678 212-307 (313)
254 3tki_A Serine/threonine-protei 99.4 1.6E-13 5.4E-18 145.6 2.7 90 569-671 171-261 (323)
255 3kk8_A Calcium/calmodulin depe 99.4 3E-13 1E-17 140.4 4.7 91 569-671 171-261 (284)
256 3cek_A Dual specificity protei 99.3 3.3E-14 1.1E-18 150.1 -2.7 90 569-671 192-292 (313)
257 3niz_A Rhodanese family protei 99.3 2.1E-13 7.1E-18 143.9 3.2 100 569-671 183-300 (311)
258 2w5a_A Serine/threonine-protei 99.3 1.7E-13 5.8E-18 141.9 2.2 92 569-675 180-271 (279)
259 3kvw_A DYRK2, dual specificity 99.3 3.7E-13 1.3E-17 148.6 4.9 42 569-610 263-304 (429)
260 4e5w_A Tyrosine-protein kinase 99.3 2.1E-14 7.2E-19 150.6 -4.9 98 571-676 195-300 (302)
261 2a19_B Interferon-induced, dou 99.3 4.4E-13 1.5E-17 139.0 5.1 92 569-680 185-276 (284)
262 3kn6_A Ribosomal protein S6 ki 99.3 7.6E-14 2.6E-18 148.2 -0.8 97 569-670 173-269 (325)
263 2w1i_A JAK2; chromosomal rearr 99.3 1.3E-13 4.4E-18 146.5 1.0 101 570-678 213-322 (326)
264 4agu_A Cyclin-dependent kinase 99.3 8.3E-13 2.8E-17 139.1 7.1 103 569-671 166-284 (311)
265 3is5_A Calcium-dependent prote 99.3 2.4E-13 8.3E-18 141.4 2.7 89 569-671 190-278 (285)
266 3a7i_A MST3 kinase, serine/thr 99.3 1.1E-13 3.8E-18 145.3 0.1 88 569-671 183-270 (303)
267 3g39_A Variable lymphocyte rec 99.3 6.6E-12 2.2E-16 119.7 12.5 105 1-108 12-116 (170)
268 1tki_A Titin; serine kinase, m 99.3 1.1E-13 3.6E-18 146.8 -0.3 90 569-671 167-257 (321)
269 3o0g_A Cell division protein k 99.3 3.2E-13 1.1E-17 141.0 3.3 101 569-671 165-282 (292)
270 1ob3_A PFPK5, cell division co 99.3 4E-13 1.4E-17 139.9 4.0 100 569-671 164-280 (288)
271 3ork_A Serine/threonine protei 99.3 2.5E-13 8.5E-18 143.2 2.2 95 569-675 183-278 (311)
272 2bdw_A Hypothetical protein K1 99.3 3.3E-13 1.1E-17 145.5 3.1 91 569-671 194-284 (362)
273 4aaa_A Cyclin-dependent kinase 99.3 5.4E-13 1.9E-17 142.0 4.6 101 569-671 188-306 (331)
274 2clq_A Mitogen-activated prote 99.3 5.9E-13 2E-17 138.9 4.7 90 569-671 187-278 (295)
275 1kob_A Twitchin; kinase, intra 99.3 2.8E-13 9.5E-18 147.2 2.1 90 569-671 214-304 (387)
276 2xrw_A Mitogen-activated prote 99.3 1.5E-12 5.2E-17 140.9 7.7 103 569-671 190-318 (371)
277 3pg1_A Mitogen-activated prote 99.3 4.9E-13 1.7E-17 144.2 3.8 100 569-671 197-316 (362)
278 2vgo_A Serine/threonine-protei 99.3 2.8E-13 9.5E-18 140.8 1.6 87 569-671 176-262 (284)
279 3eqc_A Dual specificity mitoge 99.3 9.4E-13 3.2E-17 141.8 5.8 103 569-671 194-324 (360)
280 2y0a_A Death-associated protei 99.3 2.2E-13 7.6E-18 144.7 0.8 91 569-671 181-271 (326)
281 2buj_A Serine/threonine-protei 99.3 1.2E-13 4E-18 146.0 -1.4 96 570-678 208-306 (317)
282 3an0_A Dual specificity mitoge 99.3 3.5E-13 1.2E-17 143.9 2.3 90 569-671 217-310 (340)
283 3dls_A PAS domain-containing s 99.3 3.3E-13 1.1E-17 143.9 1.9 81 569-671 193-274 (335)
284 1j1b_A Glycogen synthase kinas 99.3 1.6E-12 5.6E-17 143.0 7.6 101 569-671 220-336 (420)
285 2x4f_A Myosin light chain kina 99.3 2.9E-13 1E-17 146.5 1.5 91 569-671 252-342 (373)
286 2r9u_A Variable lymphocyte rec 99.3 1.1E-11 3.8E-16 118.6 12.3 103 2-107 16-118 (174)
287 1o6l_A RAC-beta serine/threoni 99.3 2.7E-13 9.3E-18 144.5 1.0 87 569-671 169-260 (337)
288 3aln_A Dual specificity mitoge 99.3 3.6E-13 1.2E-17 143.1 1.9 92 569-671 189-285 (327)
289 3ll6_A Cyclin G-associated kin 99.3 1.1E-13 3.9E-18 147.2 -2.0 93 570-680 215-310 (337)
290 4fr4_A YANK1, serine/threonine 99.3 4.8E-13 1.6E-17 145.0 2.8 89 569-670 178-270 (384)
291 3cok_A Serine/threonine-protei 99.3 2.3E-13 7.9E-18 140.9 0.3 87 569-671 176-262 (278)
292 3fme_A Dual specificity mitoge 99.3 3.4E-13 1.2E-17 140.4 1.5 90 569-671 173-266 (290)
293 2pmi_A Negative RE, cyclin-dep 99.3 6.2E-13 2.1E-17 140.6 3.6 100 569-671 172-293 (317)
294 2qr7_A Ribosomal protein S6 ki 99.3 2.3E-13 8E-18 145.4 -0.1 94 569-671 184-277 (342)
295 1z57_A Dual specificity protei 99.3 5.3E-13 1.8E-17 142.1 2.6 103 569-671 198-328 (339)
296 1blx_A Cyclin-dependent kinase 99.3 6.4E-13 2.2E-17 140.9 2.9 100 569-671 183-296 (326)
297 2vwi_A Serine/threonine-protei 99.3 6.8E-13 2.3E-17 139.0 2.9 91 570-671 191-287 (303)
298 2yab_A Death-associated protei 99.3 2.9E-13 1E-17 145.7 -0.1 90 569-671 182-272 (361)
299 2wtk_C Serine/threonine-protei 99.3 7.6E-13 2.6E-17 138.9 3.1 87 569-671 175-263 (305)
300 2j7t_A Serine/threonine-protei 99.3 1.1E-12 3.6E-17 137.6 4.1 90 569-671 181-275 (302)
301 4dc2_A Protein kinase C IOTA t 99.3 7.7E-13 2.6E-17 143.9 3.1 89 569-666 217-307 (396)
302 4eut_A Serine/threonine-protei 99.3 6.9E-13 2.4E-17 144.9 2.6 108 569-678 179-309 (396)
303 3nsz_A CK II alpha, casein kin 99.3 4.1E-13 1.4E-17 142.7 0.8 102 569-671 194-319 (330)
304 3ttj_A Mitogen-activated prote 99.3 8.8E-13 3E-17 146.9 3.4 103 569-671 227-355 (464)
305 3v8s_A RHO-associated protein 99.3 4.1E-12 1.4E-16 138.9 8.6 91 569-671 233-329 (410)
306 3i6u_A CDS1, serine/threonine- 99.3 3.9E-13 1.3E-17 147.9 0.5 92 569-671 305-399 (419)
307 2x7f_A TRAF2 and NCK-interacti 99.3 3.4E-13 1.2E-17 143.1 -0.0 89 569-671 193-286 (326)
308 3uc3_A Serine/threonine-protei 99.3 5.4E-13 1.8E-17 143.8 1.5 93 569-671 181-274 (361)
309 4ejn_A RAC-alpha serine/threon 99.3 3.8E-13 1.3E-17 149.4 0.3 87 569-671 313-404 (446)
310 3com_A Serine/threonine-protei 99.3 1.2E-12 4E-17 138.1 4.0 90 569-671 189-278 (314)
311 2eu9_A Dual specificity protei 99.3 7.8E-13 2.7E-17 141.8 2.6 103 569-671 203-333 (355)
312 2r3i_A Cell division protein k 99.3 1.5E-12 5E-17 136.3 4.6 98 569-671 167-283 (299)
313 2zv2_A Calcium/calmodulin-depe 99.3 1.3E-12 4.4E-17 136.7 4.2 89 569-671 201-292 (298)
314 3hko_A Calcium/calmodulin-depe 99.3 5.9E-13 2E-17 142.4 1.5 91 569-671 238-330 (345)
315 3gbz_A Kinase, CMGC CDK; ssgci 99.3 8.9E-13 3E-17 140.2 2.8 101 569-671 201-318 (329)
316 2dyl_A Dual specificity mitoge 99.3 1.7E-12 5.8E-17 137.0 4.9 91 569-671 188-283 (318)
317 2rku_A Serine/threonine-protei 99.3 2.1E-13 7.3E-18 142.4 -2.1 87 569-671 179-265 (294)
318 2y94_A 5'-AMP-activated protei 99.3 1.2E-12 4E-17 145.9 3.8 92 569-676 179-273 (476)
319 1ua2_A CAK, cell division prot 99.3 1.6E-12 5.5E-17 139.2 4.6 100 569-671 176-291 (346)
320 3mi9_A Cell division protein k 99.3 1.8E-12 6.3E-17 139.0 5.0 99 570-671 193-311 (351)
321 1nxk_A MAP kinase-activated pr 99.3 8.7E-13 3E-17 144.2 2.4 95 569-671 227-321 (400)
322 2a2a_A Death-associated protei 99.3 6.9E-13 2.3E-17 140.5 1.4 91 569-671 182-272 (321)
323 4exu_A Mitogen-activated prote 99.3 1.3E-12 4.4E-17 141.4 3.6 100 569-671 205-323 (371)
324 4fdw_A Leucine rich hypothetic 99.3 4.9E-11 1.7E-15 129.8 16.0 215 2-226 139-359 (401)
325 3a99_A Proto-oncogene serine/t 99.3 4.4E-13 1.5E-17 142.0 -0.2 81 569-671 212-293 (320)
326 1rdq_E PKA C-alpha, CAMP-depen 99.3 1.2E-12 4.2E-17 140.3 3.2 87 569-671 202-293 (350)
327 2h6d_A 5'-AMP-activated protei 99.3 4E-13 1.4E-17 138.8 -0.5 87 569-671 174-261 (276)
328 3bhy_A Death-associated protei 99.3 5.2E-13 1.8E-17 138.5 0.2 91 569-671 175-265 (283)
329 2yex_A Serine/threonine-protei 99.3 8.1E-13 2.8E-17 136.4 1.7 90 569-671 171-261 (276)
330 1xjd_A Protein kinase C, theta 99.3 2.3E-13 7.8E-18 145.5 -2.9 86 569-670 182-268 (345)
331 2owb_A Serine/threonine-protei 99.3 8.3E-13 2.8E-17 140.8 1.4 87 569-671 205-291 (335)
332 4e7w_A Glycogen synthase kinas 99.3 7.9E-13 2.7E-17 144.3 1.2 101 569-671 205-321 (394)
333 3c0i_A Peripheral plasma membr 99.3 7.5E-13 2.6E-17 142.1 1.1 89 569-671 197-286 (351)
334 3txo_A PKC-L, NPKC-ETA, protei 99.3 2.7E-13 9.3E-18 145.5 -2.4 82 569-666 188-269 (353)
335 3f3z_A Calcium/calmodulin-depe 99.2 5E-13 1.7E-17 138.2 -0.5 90 569-671 172-261 (277)
336 3fhr_A MAP kinase-activated pr 99.2 3.6E-13 1.2E-17 143.7 -1.6 100 569-676 193-294 (336)
337 3coi_A Mitogen-activated prote 99.2 1.3E-12 4.5E-17 140.3 2.8 100 569-671 187-305 (353)
338 2vd5_A DMPK protein; serine/th 99.2 8.8E-13 3E-17 144.3 1.3 90 569-671 227-327 (412)
339 2jam_A Calcium/calmodulin-depe 99.2 1.1E-12 3.9E-17 137.6 2.0 91 569-671 171-261 (304)
340 1cm8_A Phosphorylated MAP kina 99.2 3.8E-12 1.3E-16 137.5 6.0 100 569-671 189-307 (367)
341 3pfq_A PKC-B, PKC-beta, protei 99.2 1E-12 3.6E-17 153.0 1.7 82 569-666 506-587 (674)
342 2y7j_A Phosphorylase B kinase 99.2 2.2E-12 7.5E-17 139.2 4.1 91 569-671 263-359 (365)
343 2r5t_A Serine/threonine-protei 99.2 5.1E-13 1.7E-17 144.4 -1.0 90 569-674 203-292 (373)
344 2i0e_A Protein kinase C-beta I 99.2 6.9E-13 2.3E-17 142.3 -0.2 82 569-666 185-266 (353)
345 4fdw_A Leucine rich hypothetic 99.2 1.4E-10 4.7E-15 126.3 18.0 224 10-245 124-357 (401)
346 3gni_B Strad alpha; kinase fol 99.2 1.1E-12 3.9E-17 142.8 1.5 100 570-671 200-333 (389)
347 1fot_A TPK1 delta, CAMP-depend 99.2 2.1E-12 7.3E-17 136.5 3.5 87 569-671 167-258 (318)
348 3vhe_A Vascular endothelial gr 99.2 1.5E-12 5.1E-17 140.1 2.3 96 569-678 259-355 (359)
349 3a8x_A Protein kinase C IOTA t 99.2 1.5E-12 5E-17 139.4 2.2 89 569-666 174-264 (345)
350 1x8b_A WEE1HU, WEE1-like prote 99.2 6.5E-13 2.2E-17 137.9 -0.8 85 569-671 194-279 (289)
351 3oz6_A Mitogen-activated prote 99.2 6.6E-13 2.2E-17 144.7 -0.9 41 570-610 195-236 (388)
352 2b9h_A MAP kinase FUS3, mitoge 99.2 1.1E-12 3.8E-17 140.8 0.6 99 570-671 187-305 (353)
353 3qyz_A Mitogen-activated prote 99.2 1E-12 3.6E-17 141.8 0.2 100 569-671 195-313 (364)
354 3mwu_A Calmodulin-domain prote 99.2 2.9E-12 1E-16 143.9 3.9 90 569-671 187-276 (486)
355 2fst_X Mitogen-activated prote 99.2 4.2E-12 1.4E-16 137.0 5.0 100 569-671 193-311 (367)
356 1vzo_A Ribosomal protein S6 ki 99.2 1.5E-12 5.2E-17 139.9 1.4 91 569-671 224-321 (355)
357 2ac3_A MAP kinase-interacting 99.2 4.3E-12 1.5E-16 133.9 4.8 97 570-671 186-295 (316)
358 3eb0_A Putative uncharacterize 99.2 1.8E-12 6.3E-17 140.9 2.0 101 569-671 205-321 (383)
359 3lij_A Calcium/calmodulin depe 99.2 4.1E-12 1.4E-16 143.0 4.7 90 569-671 202-291 (494)
360 3nyv_A Calmodulin-domain prote 99.2 1.7E-12 5.8E-17 145.8 1.1 90 569-671 192-281 (484)
361 3a62_A Ribosomal protein S6 ki 99.2 1.2E-12 4.2E-17 139.0 -0.2 87 569-671 185-276 (327)
362 3un9_A NLR family member X1; l 99.2 2.6E-13 8.9E-18 146.4 -5.6 180 46-225 72-283 (372)
363 2ycf_A Serine/threonine-protei 99.2 1.4E-12 4.7E-17 138.2 -0.3 92 569-671 180-274 (322)
364 2wei_A Calmodulin-domain prote 99.2 2.6E-12 9E-17 133.6 1.6 90 569-671 187-276 (287)
365 2iwi_A Serine/threonine-protei 99.2 2.3E-12 8E-17 135.7 1.2 81 569-671 202-283 (312)
366 2i6l_A Mitogen-activated prote 99.2 8.2E-13 2.8E-17 139.5 -2.5 100 569-671 188-305 (320)
367 1rjb_A FL cytokine receptor; k 99.2 4.9E-12 1.7E-16 135.2 3.3 97 569-679 238-335 (344)
368 3rgf_A Cyclin-dependent kinase 99.2 4.7E-12 1.6E-16 138.7 3.0 40 569-608 199-239 (405)
369 2acx_A G protein-coupled recep 99.2 2.1E-12 7.3E-17 146.1 0.1 90 569-671 349-444 (576)
370 1phk_A Phosphorylase kinase; g 99.2 4.7E-12 1.6E-16 132.3 2.5 91 569-671 187-283 (298)
371 2ifg_A High affinity nerve gro 99.2 5.9E-11 2E-15 127.0 10.4 101 27-130 13-115 (347)
372 3q5i_A Protein kinase; CDPK, m 99.2 4.8E-12 1.6E-16 142.8 1.7 93 569-675 212-307 (504)
373 3un9_A NLR family member X1; l 99.2 1.3E-12 4.3E-17 141.1 -3.1 159 69-227 71-254 (372)
374 3p23_A Serine/threonine-protei 99.2 9.8E-12 3.3E-16 137.1 3.8 90 569-671 190-283 (432)
375 1b6c_B TGF-B superfamily recep 99.2 6.4E-12 2.2E-16 134.1 2.2 107 567-679 213-337 (342)
376 3e7e_A HBUB1, BUB1A, mitotic c 99.1 8.9E-12 3E-16 134.5 2.9 90 569-678 249-339 (365)
377 3c4z_A Rhodopsin kinase; Ser/T 99.1 5.6E-12 1.9E-16 142.2 1.3 87 569-667 353-439 (543)
378 2jii_A Serine/threonine-protei 99.1 2.7E-11 9.1E-16 130.0 6.6 108 568-680 231-338 (352)
379 3rp9_A Mitogen-activated prote 99.1 1.4E-11 4.9E-16 137.1 3.7 31 571-601 249-280 (458)
380 3qa8_A MGC80376 protein; kinas 99.1 1.2E-11 4.2E-16 141.5 2.3 95 569-668 187-294 (676)
381 3byv_A Rhoptry kinase; malaria 99.1 1.3E-11 4.6E-16 133.7 2.2 83 569-671 266-359 (377)
382 3q60_A ROP5B; pseudokinase, tr 99.1 9.1E-12 3.1E-16 134.7 0.6 95 569-671 255-352 (371)
383 1wak_A Serine/threonine-protei 99.1 3.5E-11 1.2E-15 131.0 4.7 103 569-671 257-391 (397)
384 1q8y_A SR protein kinase; tran 99.1 6.6E-11 2.3E-15 127.8 6.5 103 569-671 199-333 (373)
385 1t4h_A Serine/threonine-protei 99.1 5.5E-11 1.9E-15 123.7 5.1 90 568-671 193-282 (290)
386 2ifg_A High affinity nerve gro 99.1 2.5E-10 8.7E-15 122.1 10.4 103 2-107 12-116 (347)
387 1zy4_A Serine/threonine-protei 99.1 4.3E-11 1.5E-15 125.0 3.7 89 569-671 194-283 (303)
388 3dzo_A Rhoptry kinase domain; 99.0 5.1E-11 1.7E-15 130.7 3.6 82 569-670 271-362 (413)
389 3n9x_A Phosphotransferase; mal 99.0 6E-11 2E-15 131.0 1.9 35 571-605 217-252 (432)
390 2rio_A Serine/threonine-protei 99.0 3.1E-10 1.1E-14 125.3 6.8 94 566-671 193-295 (434)
391 3uqc_A Probable conserved tran 99.0 4.2E-11 1.5E-15 124.4 -0.4 86 581-679 178-266 (286)
392 3qd2_B Eukaryotic translation 98.9 4E-10 1.4E-14 119.3 4.3 88 567-671 238-325 (332)
393 2ra8_A Uncharacterized protein 98.9 2.3E-10 8E-15 122.3 1.5 136 88-226 166-321 (362)
394 2pml_X PFPK7, Ser/Thr protein 98.9 2.5E-10 8.5E-15 122.0 0.9 98 568-671 213-322 (348)
395 2pzi_A Probable serine/threoni 98.9 2.6E-10 9E-15 133.4 0.6 85 569-676 241-326 (681)
396 2ra8_A Uncharacterized protein 98.8 1.4E-09 4.9E-14 116.2 5.4 179 42-223 135-341 (362)
397 3m2w_A MAP kinase-activated pr 98.8 8.9E-10 3E-14 115.1 1.6 85 579-675 172-262 (299)
398 1io0_A Tropomodulin; LRR prote 98.3 6.9E-08 2.4E-12 93.0 0.4 90 18-107 32-136 (185)
399 4fs7_A Uncharacterized protein 98.3 7E-06 2.4E-10 89.0 15.1 177 16-200 156-353 (394)
400 1io0_A Tropomodulin; LRR prote 98.2 1.6E-07 5.4E-12 90.4 0.7 42 66-107 32-78 (185)
401 3rw6_A Nuclear RNA export fact 98.2 2.2E-07 7.4E-12 94.3 1.5 106 18-125 137-258 (267)
402 4gt6_A Cell surface protein; l 98.2 1.6E-05 5.4E-10 86.2 16.1 88 137-230 260-350 (394)
403 3rw6_A Nuclear RNA export fact 98.2 4.5E-08 1.5E-12 99.3 -4.1 119 28-148 122-257 (267)
404 4gt6_A Cell surface protein; l 98.2 8.6E-06 2.9E-10 88.3 13.3 107 113-224 260-369 (394)
405 4fs7_A Uncharacterized protein 98.1 1.2E-05 4.1E-10 87.1 12.3 178 15-200 178-376 (394)
406 3e4g_A ATP synthase subunit S, 97.8 5.9E-06 2E-10 77.7 2.8 87 46-132 61-153 (176)
407 3e4g_A ATP synthase subunit S, 97.8 6.8E-06 2.3E-10 77.3 2.9 82 23-104 62-149 (176)
408 4h09_A Hypothetical leucine ri 97.6 0.00038 1.3E-08 74.7 12.6 186 10-200 146-343 (379)
409 4h09_A Hypothetical leucine ri 97.5 0.00087 3E-08 71.8 14.3 197 17-221 131-342 (379)
410 2vuw_A Serine/threonine-protei 97.0 0.00036 1.2E-08 73.5 4.6 89 568-670 240-329 (336)
411 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00026 8.9E-09 67.8 2.5 89 66-154 66-169 (197)
412 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00061 2.1E-08 65.2 4.6 111 68-178 39-169 (197)
413 3rfe_A Platelet glycoprotein I 96.1 0.0079 2.7E-07 53.5 5.9 56 26-83 12-68 (130)
414 3rfe_A Platelet glycoprotein I 95.8 0.016 5.5E-07 51.5 6.6 56 50-107 12-68 (130)
415 2jwp_A Malectin, MGC80075; sug 95.7 0.012 4E-07 55.3 5.6 99 341-448 52-151 (174)
416 4azs_A Methyltransferase WBDD; 92.1 0.029 9.8E-07 63.4 0.2 35 569-604 403-437 (569)
417 2ks1_B Epidermal growth factor 90.6 0.11 3.9E-06 35.8 1.8 29 486-514 12-40 (44)
418 2l2t_A Receptor tyrosine-prote 88.6 0.15 5E-06 35.1 1.2 29 486-514 11-39 (44)
419 2jwa_A Receptor tyrosine-prote 84.3 0.31 1E-05 33.5 1.0 28 487-514 13-40 (44)
420 2k1k_A Ephrin type-A receptor 72.4 1.6 5.4E-05 29.1 1.6 16 485-500 10-25 (38)
421 3en9_A Glycoprotease, O-sialog 71.9 0.54 1.9E-05 52.5 -1.3 40 567-606 498-539 (540)
422 2k9y_A Ephrin type-A receptor 56.7 2.5 8.5E-05 28.6 0.2 10 488-497 16-25 (41)
423 3vhe_A Vascular endothelial gr 44.8 2.9 0.0001 43.3 -1.5 31 531-561 12-42 (359)
424 3dzo_A Rhoptry kinase domain; 39.2 3.7 0.00013 43.8 -1.8 23 539-561 76-98 (413)
425 3qd2_B Eukaryotic translation 34.7 6.2 0.00021 40.1 -0.9 22 540-561 5-26 (332)
426 1iij_A ERBB-2 receptor protein 32.4 5.4 0.00019 25.8 -1.1 8 505-512 27-34 (35)
427 2lz0_A Uncharacterized protein 29.7 90 0.0031 25.4 5.6 39 15-54 13-51 (100)
428 2vuw_A Serine/threonine-protei 28.8 6.9 0.00024 40.1 -1.8 21 541-561 20-40 (336)
429 2lz0_A Uncharacterized protein 27.6 98 0.0033 25.2 5.5 46 33-79 7-52 (100)
430 1rjb_A FL cytokine receptor; k 26.4 11 0.00037 38.7 -0.9 22 540-561 44-65 (344)
431 1t4h_A Serine/threonine-protei 26.3 15 0.00052 36.4 0.3 16 546-561 31-46 (290)
432 1wak_A Serine/threonine-protei 24.6 13 0.00043 38.9 -0.7 21 541-561 37-57 (397)
433 3byv_A Rhoptry kinase; malaria 23.9 9.7 0.00033 39.8 -1.8 22 540-561 72-93 (377)
434 2l9u_A Receptor tyrosine-prote 23.1 17 0.00057 23.1 -0.1 24 489-512 10-33 (40)
435 3q60_A ROP5B; pseudokinase, tr 22.7 12 0.0004 39.0 -1.5 21 541-561 62-82 (371)
436 2pml_X PFPK7, Ser/Thr protein 22.3 18 0.00061 36.9 -0.1 22 540-561 30-51 (348)
437 1q8y_A SR protein kinase; tran 22.0 15 0.00052 37.9 -0.7 21 541-561 19-39 (373)
438 1b6c_B TGF-B superfamily recep 21.9 14 0.00047 37.7 -1.1 24 538-561 39-62 (342)
439 2jii_A Serine/threonine-protei 21.7 12 0.00041 38.6 -1.7 21 541-561 42-62 (352)
440 1zar_A RIO2 kinase; serine kin 21.1 25 0.00084 35.0 0.7 20 542-561 91-110 (282)
441 2llm_A Amyloid beta A4 protein 25.8 21 0.00073 24.1 0.0 26 486-511 17-42 (43)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=2.5e-30 Score=307.97 Aligned_cols=248 Identities=31% Similarity=0.464 Sum_probs=216.6
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++.+|..|+++++|++|+|++|.+++.+|..|+++++|++|+|++|.+.+.+|..+..+++|++|++++|
T Consensus 397 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 476 (768)
T 3rgz_A 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476 (768)
T ss_dssp CEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCC
Confidence 46888888888888888999999999999999998888988999999999999999998888988999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
++++.+|..+.++++|++|+|++|++++.+|..++.+++|+.|++++|.+....+..+..+++|+.|+|++|.+++.+|.
T Consensus 477 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred cccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 99988899999999999999999999988999999999999999999988878888888999999999999988877765
Q ss_pred cc----------------------------------------------------------------------cCCCCCCE
Q 004413 161 GI----------------------------------------------------------------------GELQNLQT 170 (755)
Q Consensus 161 ~~----------------------------------------------------------------------~~l~~L~~ 170 (755)
.+ +.+++|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 43 33567889
Q ss_pred EeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccC--CCCCEEEeecCcCCCCCcccccc---ccccccccccc
Q 004413 171 LDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKS--ENLQNIDLSYNHLSGPFPSWVTS---NLQMNLVANNF 245 (755)
Q Consensus 171 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~Ls~N~l~g~ip~~~~~---~~~l~l~~n~~ 245 (755)
|||++|+++|.+|..++.+++|+.|+|++|+++|.+|..+. ++|+.|||++|+++|.+|..+.. ...|++++|++
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999999999999988654 88999999999999999988772 33589999998
Q ss_pred ccC
Q 004413 246 TFD 248 (755)
Q Consensus 246 ~~~ 248 (755)
++.
T Consensus 717 ~g~ 719 (768)
T 3rgz_A 717 SGP 719 (768)
T ss_dssp EEE
T ss_pred ccc
Confidence 865
No 2
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=5.8e-31 Score=279.26 Aligned_cols=246 Identities=26% Similarity=0.375 Sum_probs=223.5
Q ss_pred CeEEecCCcCcC--CCchhhcCCCCCCEEEccC-ccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEc
Q 004413 1 MLLSVAHNVFSG--SVPRELGNLKELTVLSFGN-NNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWA 77 (755)
Q Consensus 1 ~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 77 (755)
+.|+|++|++++ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|
T Consensus 53 ~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 132 (313)
T 1ogq_A 53 NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132 (313)
T ss_dssp EEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEEC
T ss_pred EEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeC
Confidence 369999999999 8999999999999999995 9999999999999999999999999999899999999999999999
Q ss_pred cCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCC-CCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccC
Q 004413 78 SDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLA-SLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITG 156 (755)
Q Consensus 78 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 156 (755)
++|.+++.+|..|.++++|++|++++|.+++.+|..+..++ +|+.|++++|.+....+..+..++ |+.|+|++|.+++
T Consensus 133 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp CSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE
T ss_pred CCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC
Confidence 99999999999999999999999999999999999999998 999999999998877788888887 9999999999999
Q ss_pred CCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc-
Q 004413 157 SIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT- 233 (755)
Q Consensus 157 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~- 233 (755)
.+|..+..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|++++.+|..+ .++|+.|+|++|+|+|.+|....
T Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l 290 (313)
T 1ogq_A 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNL 290 (313)
T ss_dssp CCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTG
T ss_pred cCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccc
Confidence 9999999999999999999999976665 8889999999999999998888754 48999999999999999998732
Q ss_pred -ccccccccccccccC
Q 004413 234 -SNLQMNLVANNFTFD 248 (755)
Q Consensus 234 -~~~~l~l~~n~~~~~ 248 (755)
....+++.+|+..++
T Consensus 291 ~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 291 QRFDVSAYANNKCLCG 306 (313)
T ss_dssp GGSCGGGTCSSSEEES
T ss_pred cccChHHhcCCCCccC
Confidence 233578888875544
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=2e-30 Score=308.83 Aligned_cols=247 Identities=36% Similarity=0.527 Sum_probs=142.4
Q ss_pred CeEEecCCcCcCCCchhhcCC-CCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchh-hhcCCCCCEEEcc
Q 004413 1 MLLSVAHNVFSGSVPRELGNL-KELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPST-YAKLRNMQTLWAS 78 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l-~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~ 78 (755)
++|+|++|++++.+|..+..+ ++|++|+|++|.+++.+|..|+++++|++|+|++|.+++.+|.. +.++++|++|+++
T Consensus 272 ~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls 351 (768)
T 3rgz_A 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLS 351 (768)
T ss_dssp CEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECC
T ss_pred CEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCc
Confidence 345666666665555555543 56666666666665555555666666666666666555555543 5555555555555
Q ss_pred CCCCCCCcchhhcCC---------------------------CCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCC
Q 004413 79 DAPFTGKIPDFIGNW---------------------------TKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNV 131 (755)
Q Consensus 79 ~n~l~~~~p~~~~~l---------------------------~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~ 131 (755)
+|.+++.+|..+.++ ++|++|++++|.+++.+|..+..+++|+.|++++|.+.
T Consensus 352 ~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 431 (768)
T 3rgz_A 352 FNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 431 (768)
T ss_dssp SSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred CCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCccc
Confidence 555555555544444 44555555555555555555555566666666665555
Q ss_pred CCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc-
Q 004413 132 SSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK- 210 (755)
Q Consensus 132 ~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~- 210 (755)
...+..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+|..+
T Consensus 432 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 511 (768)
T 3rgz_A 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred CcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHh
Confidence 5555555566666666666666666666666666666666666666666666666666666666666666665555543
Q ss_pred -CCCCCEEEeecCcCCCCCccccc--c-ccccccccccccc
Q 004413 211 -SENLQNIDLSYNHLSGPFPSWVT--S-NLQMNLVANNFTF 247 (755)
Q Consensus 211 -~~~L~~L~Ls~N~l~g~ip~~~~--~-~~~l~l~~n~~~~ 247 (755)
.++|++|+|++|+++|.+|..+. . ...|++++|++++
T Consensus 512 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp GCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 25666666666666666665554 1 2235666666553
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=2e-29 Score=293.47 Aligned_cols=240 Identities=22% Similarity=0.335 Sum_probs=215.9
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCcc------------------------------------------------
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNN------------------------------------------------ 33 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~------------------------------------------------ 33 (755)
.|+|++|++.|.+|++|++|++|++|+|++|.
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHH
Confidence 68999999999999999999999999999884
Q ss_pred ------------------------------CCCCCcccccCCccCcEEEccccCCCCC-----------------Cchhh
Q 004413 34 ------------------------------FSGTLPPEIGNLAKLEQLYLNSWGAGGE-----------------IPSTY 66 (755)
Q Consensus 34 ------------------------------l~~~~p~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~~ 66 (755)
+++ +|..|+++++|++|+|++|.+++. +|..+
T Consensus 165 l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 165 CINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp HHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 334 788899999999999999999886 89998
Q ss_pred h--cCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCC-CCC-CCCccccCC------CCCCeeecCCCCCCCCChh
Q 004413 67 A--KLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNS-FQG-PIPSSLSKL------ASLDSLRISDIYNVSSSLD 136 (755)
Q Consensus 67 ~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~l~~l------~~L~~L~l~~n~~~~~~~~ 136 (755)
. ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+..+ ++|+.|++++|.+. ..+.
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 8 99999999999999999999999999999999999998 998 789888876 99999999999988 5555
Q ss_pred --hhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCC-CCEEEccCCcCCCCCCcccC--
Q 004413 137 --FVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGS-LNYLFLGNNSLSGTLPTQKS-- 211 (755)
Q Consensus 137 --~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~-- 211 (755)
.+..+++|+.|++++|.++|.+| .+..+++|+.|+|++|+++ .+|..+..+++ |+.|++++|.++ .+|....
T Consensus 323 ~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~ 399 (636)
T 4eco_A 323 ETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAK 399 (636)
T ss_dssp HHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTT
T ss_pred hhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhc
Confidence 79999999999999999999999 8999999999999999999 88989999999 999999999999 6666432
Q ss_pred --CCCCEEEeecCcCCCCCccccc----------ccccccccccccc
Q 004413 212 --ENLQNIDLSYNHLSGPFPSWVT----------SNLQMNLVANNFT 246 (755)
Q Consensus 212 --~~L~~L~Ls~N~l~g~ip~~~~----------~~~~l~l~~n~~~ 246 (755)
++|+.|++++|.+++.+|..+. ....|++++|.++
T Consensus 400 ~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~ 446 (636)
T 4eco_A 400 SVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS 446 (636)
T ss_dssp CSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC
T ss_pred ccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC
Confidence 3799999999999999888765 2335899999887
No 5
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=5.4e-29 Score=264.10 Aligned_cols=225 Identities=24% Similarity=0.376 Sum_probs=211.7
Q ss_pred CeEEecC-CcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 004413 1 MLLSVAH-NVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 79 (755)
++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|..+++|++|++++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 5799995 999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchhhcCCC-CCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCC
Q 004413 80 APFTGKIPDFIGNWT-KLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSI 158 (755)
Q Consensus 80 n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 158 (755)
|.+++.+|..+..++ +|++|++++|.+++.+|..+..++ |+.|++++|.+....+..+..+++|+.|+|++|.+++.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 999999999999998 999999999999999999999997 999999999998888889999999999999999999777
Q ss_pred CccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc-cCCCCCEEEeecCc-CCCC
Q 004413 159 PSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ-KSENLQNIDLSYNH-LSGP 227 (755)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~~L~~L~Ls~N~-l~g~ 227 (755)
+. +..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|+ +.|.
T Consensus 238 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred Cc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCC
Confidence 76 888999999999999999999999999999999999999999988875 34789999999998 6653
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=3.1e-28 Score=288.77 Aligned_cols=240 Identities=20% Similarity=0.285 Sum_probs=203.1
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEc-cCccCCCC-------------------------------------------
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSF-GNNNFSGT------------------------------------------- 37 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L-s~n~l~~~------------------------------------------- 37 (755)
.|+|++|++.|.+|+.|++|++|++|+| ++|.+.|.
T Consensus 327 ~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~ 406 (876)
T 4ecn_A 327 GLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQD 406 (876)
T ss_dssp EEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHH
Confidence 5899999999999999999999999999 77754333
Q ss_pred ---------------------------------CcccccCCccCcEEEccccCCCC-----------------CCchhhh
Q 004413 38 ---------------------------------LPPEIGNLAKLEQLYLNSWGAGG-----------------EIPSTYA 67 (755)
Q Consensus 38 ---------------------------------~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~ 67 (755)
+|..|+++++|++|+|++|.+++ .+|..++
T Consensus 407 ~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~ 486 (876)
T 4ecn_A 407 AINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELS 486 (876)
T ss_dssp HHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCC
T ss_pred HhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhh
Confidence 78889999999999999999988 3888877
Q ss_pred --cCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCC-CCC-CCCccccCCC-------CCCeeecCCCCCCCCChh
Q 004413 68 --KLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNS-FQG-PIPSSLSKLA-------SLDSLRISDIYNVSSSLD 136 (755)
Q Consensus 68 --~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~l~~l~-------~L~~L~l~~n~~~~~~~~ 136 (755)
++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+..++ +|+.|++++|.+. ..+.
T Consensus 487 f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 487 WSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp GGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred hccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 99999999999999999999999999999999999998 887 7787665554 9999999999888 4555
Q ss_pred --hhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCC-CCEEEccCCcCCCCCCcccC--
Q 004413 137 --FVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGS-LNYLFLGNNSLSGTLPTQKS-- 211 (755)
Q Consensus 137 --~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~-- 211 (755)
.+.++++|+.|+|++|.++ .+| .++.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|....
T Consensus 566 ~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~ 641 (876)
T 4ecn_A 566 SASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAK 641 (876)
T ss_dssp HHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTT
T ss_pred hhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhcc
Confidence 7899999999999999998 788 8899999999999999999 78888999998 999999999998 5665432
Q ss_pred --CCCCEEEeecCcCCCCCcccc---c-----ccccccccccccc
Q 004413 212 --ENLQNIDLSYNHLSGPFPSWV---T-----SNLQMNLVANNFT 246 (755)
Q Consensus 212 --~~L~~L~Ls~N~l~g~ip~~~---~-----~~~~l~l~~n~~~ 246 (755)
++|+.|+|++|+++|.+|... . ....|++++|.++
T Consensus 642 ~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~ 686 (876)
T 4ecn_A 642 SVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ 686 (876)
T ss_dssp CSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC
T ss_pred ccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC
Confidence 348999999999998777543 1 2235788888877
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=4.5e-28 Score=282.06 Aligned_cols=241 Identities=19% Similarity=0.257 Sum_probs=215.5
Q ss_pred CeEEecCCcCcCC-----------------Cchhhc--CCCCCCEEEccCccCCCCCcccccCCccCcEEEccccC-CCC
Q 004413 1 MLLSVAHNVFSGS-----------------VPRELG--NLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWG-AGG 60 (755)
Q Consensus 1 ~~L~Ls~n~l~~~-----------------~p~~l~--~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~ 60 (755)
++|+|++|.|++. +|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++
T Consensus 209 ~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~ 288 (636)
T 4eco_A 209 RQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG 288 (636)
T ss_dssp CEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCH
T ss_pred CEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCcc
Confidence 5899999999996 999999 99999999999999999999999999999999999998 888
Q ss_pred -CCchhhhcC------CCCCEEEccCCCCCCCcch--hhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCC
Q 004413 61 -EIPSTYAKL------RNMQTLWASDAPFTGKIPD--FIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNV 131 (755)
Q Consensus 61 -~~p~~~~~l------~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~ 131 (755)
.+|..+.++ ++|++|++++|+++ .+|. .++++++|++|++++|.++|.+| .+..+++|+.|++++|.+.
T Consensus 289 ~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 289 EQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp HHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE
T ss_pred ccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc
Confidence 899988887 99999999999999 8998 89999999999999999998999 8999999999999999887
Q ss_pred CCChhhhcCCCC-CCEEEeeCccccCCCCccccCCC--CCCEEeCCCCCCCCCCccccc-------CCCCCCEEEccCCc
Q 004413 132 SSSLDFVMSLKN-LTDLSLRNALITGSIPSGIGELQ--NLQTLDLSFNNLTGQIPRTLF-------NIGSLNYLFLGNNS 201 (755)
Q Consensus 132 ~~~~~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~l~-------~l~~L~~L~Ls~N~ 201 (755)
..+..+..+++ |+.|++++|.++ .+|..+..+. +|+.|++++|.+++.+|..+. .+++|+.|+|++|.
T Consensus 367 -~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~ 444 (636)
T 4eco_A 367 -EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQ 444 (636)
T ss_dssp -ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSC
T ss_pred -cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCc
Confidence 55566888999 999999999999 7888887765 899999999999998888888 78899999999999
Q ss_pred CCCCCCccc---CCCCCEEEeecCcCCCCCcccccc----------cc-ccccccccccc
Q 004413 202 LSGTLPTQK---SENLQNIDLSYNHLSGPFPSWVTS----------NL-QMNLVANNFTF 247 (755)
Q Consensus 202 l~~~~p~~~---~~~L~~L~Ls~N~l~g~ip~~~~~----------~~-~l~l~~n~~~~ 247 (755)
++ .+|... .++|+.|+|++|.|+ .+|..... .+ .|+|++|+++.
T Consensus 445 l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 502 (636)
T 4eco_A 445 IS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTK 502 (636)
T ss_dssp CC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCB
T ss_pred cC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCc
Confidence 99 455532 489999999999999 77776542 33 58999998873
No 8
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.95 E-value=3e-27 Score=264.34 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=117.7
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCC-cccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTL-PPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 79 (755)
++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 33 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 112 (455)
T 3v47_A 33 NYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQ 112 (455)
T ss_dssp CEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTT
T ss_pred CEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCC
Confidence 57999999999888999999999999999999987555 56789999999999999999888888999999999999999
Q ss_pred CCCCCCcchh--hcCCCCCcEEEccCCCCCCCCCcc-ccCCCCCCeeecCCCCCCCCChh
Q 004413 80 APFTGKIPDF--IGNWTKLKSLRFQGNSFQGPIPSS-LSKLASLDSLRISDIYNVSSSLD 136 (755)
Q Consensus 80 n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~l~~n~~~~~~~~ 136 (755)
|.+++.++.. |.++++|++|+|++|.+++..|.. +..+++|++|++++|.+....+.
T Consensus 113 n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 172 (455)
T 3v47_A 113 CNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEE 172 (455)
T ss_dssp SCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTT
T ss_pred CCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChh
Confidence 9998766655 888999999999999999777776 78899999999998887665443
No 9
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.95 E-value=5.6e-27 Score=262.12 Aligned_cols=248 Identities=19% Similarity=0.199 Sum_probs=197.7
Q ss_pred CeEEecCCcCcCCC-chhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchh--hhcCCCCCEEEc
Q 004413 1 MLLSVAHNVFSGSV-PRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPST--YAKLRNMQTLWA 77 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L 77 (755)
++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+.. |..+++|++|+|
T Consensus 57 ~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L 136 (455)
T 3v47_A 57 QFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVL 136 (455)
T ss_dssp CEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEEC
T ss_pred cEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEEC
Confidence 57999999998666 467899999999999999999888999999999999999999998765554 889999999999
Q ss_pred cCCCCCCCcchh-hcCCCCCcEEEccCCCCCCCCCccccCC----------------------------------CCCCe
Q 004413 78 SDAPFTGKIPDF-IGNWTKLKSLRFQGNSFQGPIPSSLSKL----------------------------------ASLDS 122 (755)
Q Consensus 78 ~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~l~~l----------------------------------~~L~~ 122 (755)
++|.+++..|.. +.++++|++|++++|.+++..+..+..+ ++|++
T Consensus 137 ~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~ 216 (455)
T 3v47_A 137 RDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITT 216 (455)
T ss_dssp CSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEE
T ss_pred CCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeee
Confidence 999999877766 8899999999999999987777655443 56778
Q ss_pred eecCCCCCCCCChhhhc---------------------------------------CCCCCCEEEeeCccccCCCCcccc
Q 004413 123 LRISDIYNVSSSLDFVM---------------------------------------SLKNLTDLSLRNALITGSIPSGIG 163 (755)
Q Consensus 123 L~l~~n~~~~~~~~~l~---------------------------------------~l~~L~~L~L~~n~l~~~~p~~~~ 163 (755)
|++++|.+....+..+. ..++|+.|++++|.+++.+|..+.
T Consensus 217 L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 296 (455)
T 3v47_A 217 LDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFS 296 (455)
T ss_dssp EECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTT
T ss_pred EecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcc
Confidence 88887765432222111 125788888888888888888888
Q ss_pred CCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc--c-cccc
Q 004413 164 ELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT--S-NLQM 238 (755)
Q Consensus 164 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~--~-~~~l 238 (755)
.+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+..+ .++|++|+|++|++++..|..+. . ...|
T Consensus 297 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 376 (455)
T 3v47_A 297 HFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKEL 376 (455)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEE
Confidence 88888888888888887777788888888888888888876655543 47888888888888877777665 2 3358
Q ss_pred cccccccccC
Q 004413 239 NLVANNFTFD 248 (755)
Q Consensus 239 ~l~~n~~~~~ 248 (755)
++++|+++..
T Consensus 377 ~L~~N~l~~~ 386 (455)
T 3v47_A 377 ALDTNQLKSV 386 (455)
T ss_dssp ECCSSCCSCC
T ss_pred ECCCCccccC
Confidence 8888887753
No 10
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=9.1e-27 Score=248.53 Aligned_cols=208 Identities=23% Similarity=0.303 Sum_probs=149.8
Q ss_pred CCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEE
Q 004413 21 LKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLR 100 (755)
Q Consensus 21 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 100 (755)
.++++.|+|++|.++ .+|..++++++|++|+|++|.+. .+|..+.++++|++|+|++|.++ .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467777777777776 66666777777777777777776 66777777777777777777777 6677777777777777
Q ss_pred ccCCCCCCCCCccccC---------CCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEE
Q 004413 101 FQGNSFQGPIPSSLSK---------LASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTL 171 (755)
Q Consensus 101 L~~n~l~~~~p~~l~~---------l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 171 (755)
|++|.+.+.+|..+.. +++|++|++++|.+. ..+..+..+++|+.|+|++|.+++ +|..+..+++|+.|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 7777666666666543 777777777777666 344556777777777777777773 55567777777777
Q ss_pred eCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc
Q 004413 172 DLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT 233 (755)
Q Consensus 172 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~ 233 (755)
+|++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+ +++|+.|+|++|++.+.+|.++.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 777777777777777777777777777777777777543 36777777777777777777766
No 11
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=261.75 Aligned_cols=248 Identities=23% Similarity=0.172 Sum_probs=199.5
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+....+..|.++++|++|+|++|
T Consensus 35 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 114 (477)
T 2id5_A 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 114 (477)
T ss_dssp SEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTS
T ss_pred cEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCC
Confidence 57999999999888889999999999999999999888889999999999999999998766677899999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
.+++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++++|.+.......+..+++|+.|+|++|.+.+..+.
T Consensus 115 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~ 194 (477)
T 2id5_A 115 KIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY 194 (477)
T ss_dssp CCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTT
T ss_pred ccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChh
Confidence 99987888899999999999999999887788888999999999999888877777777888888888888877765555
Q ss_pred cccCCCC------------------------CCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCC
Q 004413 161 GIGELQN------------------------LQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENL 214 (755)
Q Consensus 161 ~~~~l~~------------------------L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L 214 (755)
.+..+++ |+.|+|++|++++..+..+..+++|+.|+|++|.+++..+..+ .++|
T Consensus 195 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (477)
T 2id5_A 195 SFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRL 274 (477)
T ss_dssp CSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTC
T ss_pred hcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccC
Confidence 5555544 4444555556664333567788889999999998886655433 3788
Q ss_pred CEEEeecCcCCCCCccccc--c-cccccccccccccC
Q 004413 215 QNIDLSYNHLSGPFPSWVT--S-NLQMNLVANNFTFD 248 (755)
Q Consensus 215 ~~L~Ls~N~l~g~ip~~~~--~-~~~l~l~~n~~~~~ 248 (755)
+.|+|++|++++..|..+. . ...|++++|.++..
T Consensus 275 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 275 QEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp CEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCC
T ss_pred CEEECCCCccceECHHHhcCcccCCEEECCCCcCcee
Confidence 8888888888877777665 2 33588888887643
No 12
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.94 E-value=2.6e-26 Score=266.47 Aligned_cols=245 Identities=17% Similarity=0.114 Sum_probs=188.1
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|.|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 36 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 115 (606)
T 3t6q_A 36 ECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQT 115 (606)
T ss_dssp CEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTS
T ss_pred cEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecccc
Confidence 57999999999888999999999999999999999888999999999999999999999888999999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCC--EEEeeCccccCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLT--DLSLRNALITGSI 158 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~--~L~L~~n~l~~~~ 158 (755)
.+++..+..|+++++|++|++++|.+++.....+..+++|++|++++|.+....+..+..+++|+ .|++++|.+++..
T Consensus 116 ~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~ 195 (606)
T 3t6q_A 116 GISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIE 195 (606)
T ss_dssp CCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEEC
T ss_pred CcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccC
Confidence 99976678899999999999999999974444455599999999999998888888888888888 7888888877655
Q ss_pred CccccCC---------------------------------------------------CCCCEEeCCCCCCCCCCccccc
Q 004413 159 PSGIGEL---------------------------------------------------QNLQTLDLSFNNLTGQIPRTLF 187 (755)
Q Consensus 159 p~~~~~l---------------------------------------------------~~L~~L~Ls~N~l~~~~p~~l~ 187 (755)
|..+... .+|+.|++++|.+++..+..+.
T Consensus 196 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~ 275 (606)
T 3t6q_A 196 PGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFH 275 (606)
T ss_dssp TTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTT
T ss_pred hhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhc
Confidence 5443221 0455566666666655555566
Q ss_pred CCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc---ccccccccccccc
Q 004413 188 NIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT---SNLQMNLVANNFT 246 (755)
Q Consensus 188 ~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~---~~~~l~l~~n~~~ 246 (755)
.+++|+.|++++|.++ .+|... .++|++|++++|.+++..|..+. ....|++++|.+.
T Consensus 276 ~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~ 338 (606)
T 3t6q_A 276 CFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338 (606)
T ss_dssp TCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSC
T ss_pred cccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcc
Confidence 6666666666666666 344332 25666666666666655454443 2224566666544
No 13
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=9.1e-27 Score=276.24 Aligned_cols=240 Identities=18% Similarity=0.227 Sum_probs=207.5
Q ss_pred CeEEecCCcCcC-----------------CCchhhc--CCCCCCEEEccCccCCCCCcccccCCccCcEEEccccC-CCC
Q 004413 1 MLLSVAHNVFSG-----------------SVPRELG--NLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWG-AGG 60 (755)
Q Consensus 1 ~~L~Ls~n~l~~-----------------~~p~~l~--~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~ 60 (755)
++|+|++|+|++ .+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++
T Consensus 451 ~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg 530 (876)
T 4ecn_A 451 QIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISA 530 (876)
T ss_dssp CEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCH
T ss_pred CEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCccc
Confidence 589999999998 4999988 99999999999999999999999999999999999998 887
Q ss_pred -CCchhhhcCC-------CCCEEEccCCCCCCCcch--hhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCC
Q 004413 61 -EIPSTYAKLR-------NMQTLWASDAPFTGKIPD--FIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYN 130 (755)
Q Consensus 61 -~~p~~~~~l~-------~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~ 130 (755)
.+|..+.+++ +|++|+|++|+++ .+|. .|+++++|++|+|++|.++ .+| .|..+++|+.|++++|.+
T Consensus 531 ~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l 607 (876)
T 4ecn_A 531 AQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQI 607 (876)
T ss_dssp HHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCC
T ss_pred ccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcc
Confidence 7888777666 9999999999999 8998 8999999999999999999 888 899999999999999998
Q ss_pred CCCChhhhcCCCC-CCEEEeeCccccCCCCccccCCCC--CCEEeCCCCCCCCCCcccc---c--CCCCCCEEEccCCcC
Q 004413 131 VSSSLDFVMSLKN-LTDLSLRNALITGSIPSGIGELQN--LQTLDLSFNNLTGQIPRTL---F--NIGSLNYLFLGNNSL 202 (755)
Q Consensus 131 ~~~~~~~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~l---~--~l~~L~~L~Ls~N~l 202 (755)
. ..+..+..+++ |+.|+|++|.++ .+|..+..++. |+.|+|++|++++.+|... . .+++|+.|+|++|.+
T Consensus 608 ~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L 685 (876)
T 4ecn_A 608 E-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEI 685 (876)
T ss_dssp S-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCC
T ss_pred c-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcC
Confidence 8 55567888898 999999999999 78888877654 9999999999988666322 2 345899999999999
Q ss_pred CCCCCccc---CCCCCEEEeecCcCCCCCcccccc----------cc-ccccccccccc
Q 004413 203 SGTLPTQK---SENLQNIDLSYNHLSGPFPSWVTS----------NL-QMNLVANNFTF 247 (755)
Q Consensus 203 ~~~~p~~~---~~~L~~L~Ls~N~l~g~ip~~~~~----------~~-~l~l~~n~~~~ 247 (755)
+ .+|... .++|+.|+|++|+|+ .+|.+... .+ .|+|++|+++.
T Consensus 686 ~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~ 742 (876)
T 4ecn_A 686 Q-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS 742 (876)
T ss_dssp C-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCCC
T ss_pred C-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCcc
Confidence 9 566543 478999999999998 77776542 33 58899998873
No 14
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.94 E-value=1.3e-25 Score=240.15 Aligned_cols=219 Identities=26% Similarity=0.328 Sum_probs=116.0
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
+|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++++|.
T Consensus 56 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~ 132 (330)
T 1xku_A 56 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENE 132 (330)
T ss_dssp EEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSC
T ss_pred EEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCc
Confidence 4555555555544445555555555555555555444555555555555555555554 2333222 455555555555
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCC--CCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCC
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQG--PIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIP 159 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 159 (755)
+++..+..|.++++|++|++++|.+.. ..+..+..+++|+.|++++|.+....... .++|+.|++++|.+++..+
T Consensus 133 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~---~~~L~~L~l~~n~l~~~~~ 209 (330)
T 1xku_A 133 ITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL---PPSLTELHLDGNKITKVDA 209 (330)
T ss_dssp CCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSC---CTTCSEEECTTSCCCEECT
T ss_pred ccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccc---cccCCEEECCCCcCCccCH
Confidence 554444455555555555555555542 34445555555555555555544332211 1455555555555555555
Q ss_pred ccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCC
Q 004413 160 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGP 227 (755)
Q Consensus 160 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ 227 (755)
..+..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++ .+|... .++|++|++++|+|++.
T Consensus 210 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 210 ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred HHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCcc
Confidence 55555555666666555555444445555555566666655555 333322 24555566665555543
No 15
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.9e-26 Score=239.79 Aligned_cols=225 Identities=21% Similarity=0.185 Sum_probs=202.1
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
+++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|++++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 15 TTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp EEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 5788888887 566544 4799999999999997777889999999999999999988888999999999999999997
Q ss_pred -CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 82 -FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 82 -l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
+....+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.......+..+++|+.|+|++|.+++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 7766688899999999999999999988888999999999999999999888878899999999999999999977777
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc--cCCCCCEEEeecCcCCCCCc
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFP 229 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~~L~~L~Ls~N~l~g~ip 229 (755)
.+..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++..+.. ..++|+.|+|++|++....+
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 8999999999999999999888999999999999999999999755442 34899999999999987655
No 16
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=1.5e-25 Score=239.14 Aligned_cols=220 Identities=20% Similarity=0.246 Sum_probs=204.6
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
+.|+|++|+++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.+. .+|..|.++++|++|+|++|
T Consensus 84 ~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n 160 (328)
T 4fcg_A 84 VALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRAC 160 (328)
T ss_dssp CEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEE
T ss_pred eEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCC
Confidence 47999999999 88888999999999999999999 89999999999999999999998 78999999999999999999
Q ss_pred CCCCCcchhhcC---------CCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeC
Q 004413 81 PFTGKIPDFIGN---------WTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRN 151 (755)
Q Consensus 81 ~l~~~~p~~~~~---------l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~ 151 (755)
++.+.+|..+.. +++|++|+|++|.++ .+|..+..+++|++|++++|.+... +..+..+++|+.|+|++
T Consensus 161 ~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l-~~~l~~l~~L~~L~Ls~ 238 (328)
T 4fcg_A 161 PELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSAL-GPAIHHLPKLEELDLRG 238 (328)
T ss_dssp TTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCC-CGGGGGCTTCCEEECTT
T ss_pred CCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcC-chhhccCCCCCEEECcC
Confidence 999899987764 999999999999999 8899999999999999999988854 44689999999999999
Q ss_pred ccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccC--CCCCEEEeecCcCC
Q 004413 152 ALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKS--ENLQNIDLSYNHLS 225 (755)
Q Consensus 152 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~Ls~N~l~ 225 (755)
|.+.+.+|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..+. ++|+.+++..|.+.
T Consensus 239 n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 239 CTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998654 88999998887765
No 17
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=9.5e-26 Score=238.37 Aligned_cols=243 Identities=21% Similarity=0.195 Sum_probs=209.3
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCC--CchhhhcCCCCCEEEccC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGE--IPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~ 79 (755)
.++.++++++ .+|..+. ++|++|+|++|.++...+..|.++++|++|+|++|.+... .+..+..+++|++|++++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 5788888887 5666554 6999999999999854445589999999999999998733 367788899999999999
Q ss_pred CCCCCCcchhhcCCCCCcEEEccCCCCCCCCC-ccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccC-C
Q 004413 80 APFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP-SSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITG-S 157 (755)
Q Consensus 80 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~-~ 157 (755)
|.++ .+|..+.++++|++|++++|.+++..+ ..+..+++|++|++++|.+....+..+..+++|++|+|++|.+++ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 9988 577789999999999999999986554 578999999999999999888777888999999999999999987 5
Q ss_pred CCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc--cCCCCCEEEeecCcCCCCCcccccc-
Q 004413 158 IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPSWVTS- 234 (755)
Q Consensus 158 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~~L~~L~Ls~N~l~g~ip~~~~~- 234 (755)
+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..+.. ..++|+.|+|++|++++..|..+..
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 7889999999999999999999877889999999999999999999766543 3489999999999999988877652
Q ss_pred --c-ccccccccccccC
Q 004413 235 --N-LQMNLVANNFTFD 248 (755)
Q Consensus 235 --~-~~l~l~~n~~~~~ 248 (755)
. ..|++++|+++++
T Consensus 247 ~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 247 PSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTCCEEECTTCCEECS
T ss_pred hccCCEEEccCCCeecc
Confidence 2 3589999998765
No 18
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.93 E-value=3e-25 Score=237.47 Aligned_cols=217 Identities=24% Similarity=0.291 Sum_probs=102.0
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
+|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+. .+|..+. ++|++|++++|.
T Consensus 58 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~ 134 (332)
T 2ft3_A 58 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNR 134 (332)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSC
T ss_pred EEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCc
Confidence 3444444444444444444444444444444444444444444444444444444443 2222222 444444444444
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCC--CCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCC
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQ--GPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIP 159 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 159 (755)
++...+..|.++++|++|++++|.++ +..+..+..+ +|+.|++++|.+....... .++|+.|++++|.+++..+
T Consensus 135 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~---~~~L~~L~l~~n~i~~~~~ 210 (332)
T 2ft3_A 135 IRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDL---PETLNELHLDHNKIQAIEL 210 (332)
T ss_dssp CCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSS---CSSCSCCBCCSSCCCCCCT
T ss_pred cCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccc---cCCCCEEECCCCcCCccCH
Confidence 44333333444444444444444443 1333344444 4444444444443322111 1345555555555555444
Q ss_pred ccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCC
Q 004413 160 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSG 226 (755)
Q Consensus 160 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g 226 (755)
..+..+++|+.|+|++|++++..+..+..+++|+.|++++|+++ .+|... .++|+.|++++|+|++
T Consensus 211 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 211 EDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp TSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred HHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 55555555555555555555444445555555555555555555 333322 2455555555555553
No 19
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=6.4e-26 Score=239.71 Aligned_cols=227 Identities=19% Similarity=0.170 Sum_probs=201.5
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCC--CCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEcc
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSG--TLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWAS 78 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 78 (755)
++|+|++|+++...+..|.++++|++|+|++|.++. ..+..+..+++|++|+|++|.+. .+|..+..+++|++|+++
T Consensus 31 ~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~ 109 (306)
T 2z66_A 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQ 109 (306)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECT
T ss_pred CEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECC
Confidence 579999999995555568999999999999999973 23677888999999999999986 467779999999999999
Q ss_pred CCCCCCCcc-hhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCC-CChhhhcCCCCCCEEEeeCccccC
Q 004413 79 DAPFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVS-SSLDFVMSLKNLTDLSLRNALITG 156 (755)
Q Consensus 79 ~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~-~~~~~l~~l~~L~~L~L~~n~l~~ 156 (755)
+|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+.. ..+..+..+++|+.|+|++|.+++
T Consensus 110 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 189 (306)
T 2z66_A 110 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 189 (306)
T ss_dssp TSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred CCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCC
Confidence 999986554 578999999999999999998888899999999999999998876 456678899999999999999998
Q ss_pred CCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccC---CCCCEEEeecCcCCCCC
Q 004413 157 SIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKS---ENLQNIDLSYNHLSGPF 228 (755)
Q Consensus 157 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~Ls~N~l~g~i 228 (755)
..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..+.... ++|++|+|++|++++..
T Consensus 190 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 190 LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 8899999999999999999999987777899999999999999999988776543 58999999999998754
No 20
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.93 E-value=2e-25 Score=244.33 Aligned_cols=256 Identities=18% Similarity=0.196 Sum_probs=181.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|++++|.+....+..+.++++|++|+|++|.+++..+..|.++++|++|+|++|.+.+..|..|.++++|++|++++|
T Consensus 48 ~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 127 (390)
T 3o6n_A 48 KIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 127 (390)
T ss_dssp SEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCC
Confidence 35677777776444444667777777777777776655566777777777777777777666666777777777777777
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcC--------------------
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMS-------------------- 140 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~-------------------- 140 (755)
.++...+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+.......+..
T Consensus 128 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L 207 (390)
T 3o6n_A 128 DLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAV 207 (390)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSC
T ss_pred ccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcc
Confidence 777433344567777777777777777666666777777777777777665443322221
Q ss_pred -----------------CCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCC
Q 004413 141 -----------------LKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLS 203 (755)
Q Consensus 141 -----------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 203 (755)
.++|+.|++++|.+++. ..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|+++
T Consensus 208 ~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 285 (390)
T 3o6n_A 208 EELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285 (390)
T ss_dssp SEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC
T ss_pred eEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc
Confidence 23567777777777643 46788999999999999999888899999999999999999998
Q ss_pred CCCCcc-cCCCCCEEEeecCcCCCCCccccc---ccccccccccccccCCCCCCCCCCcccc
Q 004413 204 GTLPTQ-KSENLQNIDLSYNHLSGPFPSWVT---SNLQMNLVANNFTFDRSNISVFPGLHCL 261 (755)
Q Consensus 204 ~~~p~~-~~~~L~~L~Ls~N~l~g~ip~~~~---~~~~l~l~~n~~~~~~~~~~~~~~l~~l 261 (755)
+..... ..++|+.|+|++|+++ .+|..+. ....|++++|+++.. ....++.+..+
T Consensus 286 ~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~--~~~~~~~L~~L 344 (390)
T 3o6n_A 286 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL--KLSTHHTLKNL 344 (390)
T ss_dssp EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC--CCCTTCCCSEE
T ss_pred ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee--CchhhccCCEE
Confidence 643332 3589999999999998 5666554 334689999998744 34445555444
No 21
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.93 E-value=1.7e-25 Score=259.66 Aligned_cols=247 Identities=21% Similarity=0.196 Sum_probs=218.9
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCch-hhhcCCCCCEEEccC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPS-TYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~ 79 (755)
++|+|++|+++ .+|..+.++++|++|+|++|.+++..|..+.++++|++|++++|.+.+.+|. .+..+++|++|++++
T Consensus 281 ~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 359 (606)
T 3t6q_A 281 QELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSH 359 (606)
T ss_dssp SEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCS
T ss_pred CEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCC
Confidence 57999999998 7888899999999999999999987788999999999999999999877765 589999999999999
Q ss_pred CCCCCCc--chhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChh-hhcCCCCCCEEEeeCccccC
Q 004413 80 APFTGKI--PDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLD-FVMSLKNLTDLSLRNALITG 156 (755)
Q Consensus 80 n~l~~~~--p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~-~l~~l~~L~~L~L~~n~l~~ 156 (755)
|.+++.. +..+.++++|++|++++|.+.+..|..+..+++|+.|++++|.+....+. .+..+++|+.|++++|.+.+
T Consensus 360 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 439 (606)
T 3t6q_A 360 DDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDI 439 (606)
T ss_dssp SCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBT
T ss_pred CccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCC
Confidence 9998655 77899999999999999999988889999999999999999988766554 48899999999999999998
Q ss_pred CCCccccCCCCCCEEeCCCCCCCCC---CcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccc
Q 004413 157 SIPSGIGELQNLQTLDLSFNNLTGQ---IPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSW 231 (755)
Q Consensus 157 ~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~ 231 (755)
..|..+..+++|+.|+|++|++++. .+..+..+++|+.|++++|.+++..|..+ .++|+.|+|++|++++.+|..
T Consensus 440 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 519 (606)
T 3t6q_A 440 SSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEA 519 (606)
T ss_dssp TCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGG
T ss_pred cCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhH
Confidence 8999999999999999999999862 33678899999999999999998777654 489999999999999988888
Q ss_pred cc--ccccccccccccccC
Q 004413 232 VT--SNLQMNLVANNFTFD 248 (755)
Q Consensus 232 ~~--~~~~l~l~~n~~~~~ 248 (755)
+. ..+.|++++|+++..
T Consensus 520 l~~l~~L~L~L~~N~l~~~ 538 (606)
T 3t6q_A 520 LSHLKGIYLNLASNHISII 538 (606)
T ss_dssp GTTCCSCEEECCSSCCCCC
T ss_pred hCcccccEEECcCCccccc
Confidence 77 334789999998743
No 22
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.93 E-value=3e-25 Score=247.89 Aligned_cols=242 Identities=21% Similarity=0.203 Sum_probs=201.1
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.++.++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4566667776 5676554 689999999999998888889999999999999999988888889999999999999999
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCC-CCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIY-NVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~-~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
++...+..|.++++|++|+|++|.++...+..|..+++|+.|++++|+ +.......+.++++|+.|+|++|.+++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 997666778899999999999999986666688899999999999854 4444455788899999999999999854 4
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc---cc
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT---SN 235 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~---~~ 235 (755)
.+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..+ .++|+.|+|++|+|++..+..+. ..
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 57888999999999999998888899999999999999999997766544 37899999999999865555544 23
Q ss_pred ccccccccccccC
Q 004413 236 LQMNLVANNFTFD 248 (755)
Q Consensus 236 ~~l~l~~n~~~~~ 248 (755)
..|+|++|++.|+
T Consensus 293 ~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 293 VELHLHHNPWNCD 305 (452)
T ss_dssp CEEECCSSCEECS
T ss_pred CEEEccCCCcCCC
Confidence 3588999998876
No 23
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.2e-25 Score=257.73 Aligned_cols=255 Identities=18% Similarity=0.196 Sum_probs=178.6
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
+|++++|.+....+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|.
T Consensus 55 ~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 134 (597)
T 3oja_B 55 IVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND 134 (597)
T ss_dssp EEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCC
Confidence 46666666665444556666677777777776666555566667777777777777666666666667777777777776
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcC---------------------
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMS--------------------- 140 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~--------------------- 140 (755)
+++..+..|+++++|++|+|++|.+++..|..|..+++|++|++++|.+.......+..
T Consensus 135 l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~ 214 (597)
T 3oja_B 135 LSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVE 214 (597)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCS
T ss_pred CCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhh
Confidence 66444444566677777777777666666666666667777777666655443222211
Q ss_pred ----------------CCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 004413 141 ----------------LKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSG 204 (755)
Q Consensus 141 ----------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 204 (755)
.++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|.+++
T Consensus 215 ~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 292 (597)
T 3oja_B 215 ELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 292 (597)
T ss_dssp EEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE
T ss_pred eeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC
Confidence 2357777777777775 3678899999999999999998889999999999999999999997
Q ss_pred CCCcc-cCCCCCEEEeecCcCCCCCccccc---ccccccccccccccCCCCCCCCCCcccc
Q 004413 205 TLPTQ-KSENLQNIDLSYNHLSGPFPSWVT---SNLQMNLVANNFTFDRSNISVFPGLHCL 261 (755)
Q Consensus 205 ~~p~~-~~~~L~~L~Ls~N~l~g~ip~~~~---~~~~l~l~~n~~~~~~~~~~~~~~l~~l 261 (755)
..+.. .+++|+.|+|++|.++ .+|.++. ....|++++|.++.. ++..++.+..+
T Consensus 293 l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~L~~L 350 (597)
T 3oja_B 293 LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL--KLSTHHTLKNL 350 (597)
T ss_dssp EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC--CCCTTCCCSEE
T ss_pred CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc--ChhhcCCCCEE
Confidence 53332 2589999999999998 6777665 334689999998754 34455555444
No 24
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.4e-25 Score=256.21 Aligned_cols=244 Identities=18% Similarity=0.150 Sum_probs=202.1
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.++++|++|+|++|
T Consensus 78 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N 157 (597)
T 3oja_B 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157 (597)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC
Confidence 57999999999888889999999999999999999888888999999999999999998766667899999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCC-------------------------------------CCCCee
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKL-------------------------------------ASLDSL 123 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-------------------------------------~~L~~L 123 (755)
.+++..|..|+++++|++|+|++|.+++.....+..+ ++|+.|
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L 237 (597)
T 3oja_B 158 NLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTIL 237 (597)
T ss_dssp CCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEE
T ss_pred cCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEE
Confidence 9998888889999999999999999985432222221 234445
Q ss_pred ecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCC
Q 004413 124 RISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLS 203 (755)
Q Consensus 124 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 203 (755)
++++|.+.. +..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++
T Consensus 238 ~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 238 KLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp ECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC
Confidence 555554443 3568889999999999999999999999999999999999999995 6777788999999999999999
Q ss_pred CCCCccc--CCCCCEEEeecCcCCCCCcccccccccccccccccccC
Q 004413 204 GTLPTQK--SENLQNIDLSYNHLSGPFPSWVTSNLQMNLVANNFTFD 248 (755)
Q Consensus 204 ~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~~~~~l~l~~n~~~~~ 248 (755)
. +|... +++|+.|+|++|.|++..+..+.....|++++|+++++
T Consensus 315 ~-i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 315 H-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp C-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHH
T ss_pred c-cCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCCh
Confidence 4 55433 48999999999999866444444455689999998865
No 25
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=3.6e-25 Score=246.35 Aligned_cols=242 Identities=21% Similarity=0.205 Sum_probs=202.2
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.++.++++++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+....+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 4566677776 6776665 689999999999987778889999999999999999988878889999999999999999
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCC-CCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYN-VSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~-~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
++...+..|.++++|++|+|++|.++...+..|..+++|+.|++++|+. .......+.++++|+.|+|++|.++ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-
Confidence 9966666789999999999999999876677889999999999998554 4444557888999999999999998 455
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc---cc
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT---SN 235 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~---~~ 235 (755)
.+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+ .++|+.|+|++|+|++..+..+. ..
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 47888999999999999998888899999999999999999997766543 37899999999999966655544 23
Q ss_pred ccccccccccccC
Q 004413 236 LQMNLVANNFTFD 248 (755)
Q Consensus 236 ~~l~l~~n~~~~~ 248 (755)
..|+|++|++.|+
T Consensus 282 ~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 282 ERIHLHHNPWNCN 294 (440)
T ss_dssp CEEECCSSCEECS
T ss_pred CEEEcCCCCccCC
Confidence 3588999998876
No 26
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.93 E-value=3.8e-25 Score=231.29 Aligned_cols=221 Identities=19% Similarity=0.213 Sum_probs=179.3
Q ss_pred CEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCC
Q 004413 25 TVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGN 104 (755)
Q Consensus 25 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 104 (755)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|++++|.+++..+..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67888888887 566544 468899999998888777778888899999999999888777888888899999999988
Q ss_pred C-CCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCc
Q 004413 105 S-FQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIP 183 (755)
Q Consensus 105 ~-l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 183 (755)
. ++...+..+..+++|++|++++|.+....+..+..+++|++|++++|.+++..+..+..+++|+.|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 776667788888999999999888887777788888899999999998887777778888899999999998886555
Q ss_pred ccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc---ccccccccccccccC
Q 004413 184 RTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT---SNLQMNLVANNFTFD 248 (755)
Q Consensus 184 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~---~~~~l~l~~n~~~~~ 248 (755)
..+..+++|+.|++++|.+++..|..+ .++|+.|+|++|.|++..+..+. ....|++++|+++++
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 678888899999999998887766554 37889999999999876655554 233588888888765
No 27
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.93 E-value=3.9e-25 Score=248.81 Aligned_cols=243 Identities=20% Similarity=0.195 Sum_probs=215.3
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.++.++++++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 5677888887 6776664 699999999999998888899999999999999999998889999999999999999999
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCcc
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSG 161 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~ 161 (755)
++...+..|.++++|++|+|++|.+++..+..|..+++|+.|++++|.+....+..+..+++|+.|+|++|.+++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 99666667899999999999999999888899999999999999999998888888999999999999999999777778
Q ss_pred ccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccC--CCCCEEEeecCcCCCCCcc-ccc---cc
Q 004413 162 IGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKS--ENLQNIDLSYNHLSGPFPS-WVT---SN 235 (755)
Q Consensus 162 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~Ls~N~l~g~ip~-~~~---~~ 235 (755)
+..+++|+.|+|++|.+.+..+..+..+++|+.|++++|.+.+.++.... .+|+.|+|++|.|++ +|. .+. ..
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L 250 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVRHLVYL 250 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS-CCHHHHTTCTTC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc-cCHHHhcCcccc
Confidence 99999999999999999987778899999999999999998887776544 589999999999994 553 333 33
Q ss_pred ccccccccccccC
Q 004413 236 LQMNLVANNFTFD 248 (755)
Q Consensus 236 ~~l~l~~n~~~~~ 248 (755)
..|+|++|.++..
T Consensus 251 ~~L~Ls~n~l~~~ 263 (477)
T 2id5_A 251 RFLNLSYNPISTI 263 (477)
T ss_dssp CEEECCSSCCCEE
T ss_pred CeeECCCCcCCcc
Confidence 4689999987643
No 28
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.4e-25 Score=253.34 Aligned_cols=104 Identities=21% Similarity=0.181 Sum_probs=64.3
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|++|
T Consensus 24 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N 100 (520)
T 2z7x_B 24 TILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFN 100 (520)
T ss_dssp SEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSS
T ss_pred cEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCC
Confidence 35666666666655566666666666666666666555666666666666666666665 34433 5666666666666
Q ss_pred CCCC-CcchhhcCCCCCcEEEccCCCCC
Q 004413 81 PFTG-KIPDFIGNWTKLKSLRFQGNSFQ 107 (755)
Q Consensus 81 ~l~~-~~p~~~~~l~~L~~L~L~~n~l~ 107 (755)
.+++ .+|..|+++++|++|++++|.++
T Consensus 101 ~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 101 AFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred ccccccchhhhccCCcceEEEecCcccc
Confidence 6654 35566666666666666666554
No 29
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.8e-25 Score=252.84 Aligned_cols=255 Identities=18% Similarity=0.165 Sum_probs=186.5
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCC-CCchhhhcCCCCCEEEccC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGG-EIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~ 79 (755)
++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++
T Consensus 48 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~ 124 (520)
T 2z7x_B 48 RILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLST 124 (520)
T ss_dssp CEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEE
T ss_pred cEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecC
Confidence 58999999999888999999999999999999998 57766 89999999999999987 5788999999999999999
Q ss_pred CCCCCCcchhhcCCCCC--cEEEccCCCC--CCCCCccccCCC-------------------------------------
Q 004413 80 APFTGKIPDFIGNWTKL--KSLRFQGNSF--QGPIPSSLSKLA------------------------------------- 118 (755)
Q Consensus 80 n~l~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~p~~l~~l~------------------------------------- 118 (755)
|.+++ ..+..+++| ++|++++|.+ .+..|..+..+.
T Consensus 125 n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 201 (520)
T 2z7x_B 125 THLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVL 201 (520)
T ss_dssp SSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECC
T ss_pred cccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccc
Confidence 98864 234444444 5555555555 333333332211
Q ss_pred ----------------------------------------------CCCeeecCCCCCCCCChhh---------------
Q 004413 119 ----------------------------------------------SLDSLRISDIYNVSSSLDF--------------- 137 (755)
Q Consensus 119 ----------------------------------------------~L~~L~l~~n~~~~~~~~~--------------- 137 (755)
+|++|++++|.+....+..
T Consensus 202 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l 281 (520)
T 2z7x_B 202 EDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIH 281 (520)
T ss_dssp STTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEE
T ss_pred cccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEec
Confidence 3333333333322111000
Q ss_pred --------------------------------------hcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCC
Q 004413 138 --------------------------------------VMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLT 179 (755)
Q Consensus 138 --------------------------------------l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 179 (755)
...+++|++|++++|.+++.+|..+..+++|+.|+|++|+++
T Consensus 282 ~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 361 (520)
T 2z7x_B 282 QVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK 361 (520)
T ss_dssp EEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCC
T ss_pred cccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccC
Confidence 157788999999999999888888999999999999999998
Q ss_pred C--CCcccccCCCCCCEEEccCCcCCCCCCcc---cCCCCCEEEeecCcCCCCCccccc-ccccccccccccccCCCCCC
Q 004413 180 G--QIPRTLFNIGSLNYLFLGNNSLSGTLPTQ---KSENLQNIDLSYNHLSGPFPSWVT-SNLQMNLVANNFTFDRSNIS 253 (755)
Q Consensus 180 ~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~---~~~~L~~L~Ls~N~l~g~ip~~~~-~~~~l~l~~n~~~~~~~~~~ 253 (755)
+ .+|..+..+++|+.|++++|.+++.+|.. ..++|+.|++++|++++.+|..+. ....|++++|+++.-+....
T Consensus 362 ~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~ 441 (520)
T 2z7x_B 362 ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVV 441 (520)
T ss_dssp BHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCGGGG
T ss_pred ccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCcccccchhhh
Confidence 6 55677888999999999999998756643 237889999999999888887775 34468888888874332223
Q ss_pred CCCCcccc
Q 004413 254 VFPGLHCL 261 (755)
Q Consensus 254 ~~~~l~~l 261 (755)
.++.+..+
T Consensus 442 ~l~~L~~L 449 (520)
T 2z7x_B 442 KLEALQEL 449 (520)
T ss_dssp GCTTCCEE
T ss_pred cCCCCCEE
Confidence 34444444
No 30
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.93 E-value=1.5e-25 Score=256.86 Aligned_cols=156 Identities=19% Similarity=0.193 Sum_probs=121.6
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 29 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n 108 (549)
T 2z81_A 29 KSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN 108 (549)
T ss_dssp CEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTC
T ss_pred cEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCC
Confidence 57888888888888888888888999999888888777788888888888888888888777777888888888888888
Q ss_pred CCCC-CcchhhcCCCCCcEEEccCCCCCCCCC-ccccCCCCCCeeecCCCCCCCCChhhh--------------------
Q 004413 81 PFTG-KIPDFIGNWTKLKSLRFQGNSFQGPIP-SSLSKLASLDSLRISDIYNVSSSLDFV-------------------- 138 (755)
Q Consensus 81 ~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~n~~~~~~~~~l-------------------- 138 (755)
.+++ ..|..++++++|++|++++|.+.+.+| ..+..+++|++|++++|.+....+..+
T Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 188 (549)
T 2z81_A 109 PYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLL 188 (549)
T ss_dssp CCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHH
T ss_pred cccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccc
Confidence 8875 356678888888888888887444444 567778888888888777665444333
Q ss_pred ----cCCCCCCEEEeeCccccC
Q 004413 139 ----MSLKNLTDLSLRNALITG 156 (755)
Q Consensus 139 ----~~l~~L~~L~L~~n~l~~ 156 (755)
..+++|++|++++|.+++
T Consensus 189 ~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 189 EIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp HHHHHSTTTBSEEEEESCBCTT
T ss_pred hhhHhhcccccEEEccCCcccc
Confidence 346677777777777765
No 31
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.93 E-value=2.6e-25 Score=248.44 Aligned_cols=225 Identities=17% Similarity=0.137 Sum_probs=202.6
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|+|++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..|..+++|++|+|++|
T Consensus 78 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 157 (452)
T 3zyi_A 78 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNN 157 (452)
T ss_dssp SEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSC
T ss_pred cEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCC
Confidence 57999999999998999999999999999999999888899999999999999999998877778999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCC-CCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGN-SFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIP 159 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 159 (755)
.++...+..|.++++|++|++++| .+....+..|..+++|+.|++++|.+... +.+..+++|+.|+|++|.+++..|
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 158 PIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRP 235 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC--CCCTTCTTCCEEECTTSCCSEECG
T ss_pred CcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc--ccccccccccEEECcCCcCcccCc
Confidence 999666678999999999999995 55533444689999999999999988765 458889999999999999999999
Q ss_pred ccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCC
Q 004413 160 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGP 227 (755)
Q Consensus 160 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ 227 (755)
..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|++..+..+ .++|+.|+|++|++...
T Consensus 236 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 236 GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp GGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred ccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 999999999999999999998888999999999999999999996655433 48999999999998753
No 32
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.93 E-value=3.3e-25 Score=257.13 Aligned_cols=136 Identities=18% Similarity=0.215 Sum_probs=119.8
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 35 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 114 (606)
T 3vq2_A 35 KNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTS
T ss_pred CEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCC
Confidence 57899999999888888999999999999999998777888999999999999999998888889999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCC-CCCccccCCCCCCeeecCCCCCCCCChh
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQG-PIPSSLSKLASLDSLRISDIYNVSSSLD 136 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~ 136 (755)
.+++..+..|+++++|++|++++|.+++ .+|..+.++++|++|++++|.+....+.
T Consensus 115 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 115 KLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 9987777789999999999999999985 5688999999999999998887655443
No 33
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.93 E-value=2.3e-25 Score=258.40 Aligned_cols=243 Identities=20% Similarity=0.164 Sum_probs=177.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+.+..+..|+++++|++|++++|
T Consensus 59 ~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 138 (606)
T 3vq2_A 59 QWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 138 (606)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSS
T ss_pred cEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCC
Confidence 57999999999888889999999999999999999888999999999999999999998877788999999999999999
Q ss_pred CCCC-CcchhhcCCCCCcEEEccCCCCCCCCCccccCCC---------------------------CCCeeecCCCCCC-
Q 004413 81 PFTG-KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLA---------------------------SLDSLRISDIYNV- 131 (755)
Q Consensus 81 ~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~---------------------------~L~~L~l~~n~~~- 131 (755)
.+++ .+|..|+++++|++|++++|.+++..+..+..+. +|+.|++++|.+.
T Consensus 139 ~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~ 218 (606)
T 3vq2_A 139 FIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSS 218 (606)
T ss_dssp CCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCH
T ss_pred cccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccch
Confidence 9986 6799999999999999999988865555443332 2233333333211
Q ss_pred --------------------------------------------------------------------------------
Q 004413 132 -------------------------------------------------------------------------------- 131 (755)
Q Consensus 132 -------------------------------------------------------------------------------- 131 (755)
T Consensus 219 ~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 298 (606)
T 3vq2_A 219 NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK 298 (606)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCC
T ss_pred hHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccch
Confidence
Q ss_pred CCChhhhcCCCCCCEEEeeCccccCCCCc--------------------cccCCCCCCEEeCCCCCCCCC--CcccccCC
Q 004413 132 SSSLDFVMSLKNLTDLSLRNALITGSIPS--------------------GIGELQNLQTLDLSFNNLTGQ--IPRTLFNI 189 (755)
Q Consensus 132 ~~~~~~l~~l~~L~~L~L~~n~l~~~~p~--------------------~~~~l~~L~~L~Ls~N~l~~~--~p~~l~~l 189 (755)
.. +.+..+++|+.|++++|.+ +.+|. .+..+++|+.|++++|.+++. ++..+..+
T Consensus 299 ~l--~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~ 375 (606)
T 3vq2_A 299 YL--EDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGT 375 (606)
T ss_dssp CC--CCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCC
T ss_pred hh--hhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccC
Confidence 00 0223334455555555554 23331 344567777888888887754 36777888
Q ss_pred CCCCEEEccCCcCCCCCCcc--cCCCCCEEEeecCcCCCCCc-cccc---cccccccccccccc
Q 004413 190 GSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFP-SWVT---SNLQMNLVANNFTF 247 (755)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~--~~~~L~~L~Ls~N~l~g~ip-~~~~---~~~~l~l~~n~~~~ 247 (755)
++|+.|++++|.+++.. .. ..++|+.|++++|++++..| ..+. ....|++++|.++.
T Consensus 376 ~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 438 (606)
T 3vq2_A 376 NSLRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438 (606)
T ss_dssp SCCCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEE
T ss_pred CcccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCc
Confidence 88888888888877533 32 23788888888888887766 3333 23357788887764
No 34
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.93 E-value=1.1e-24 Score=256.35 Aligned_cols=233 Identities=19% Similarity=0.176 Sum_probs=151.2
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.++++|++|++++|
T Consensus 28 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n 107 (680)
T 1ziw_A 28 TVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSN 107 (680)
T ss_dssp SEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred cEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCC
Confidence 45777777777666666777777777777777777666777777777777777777776554456777777777777777
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhc--CCCCCCEEEeeCccccCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVM--SLKNLTDLSLRNALITGSI 158 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~--~l~~L~~L~L~~n~l~~~~ 158 (755)
.+++..|..|+++++|++|++++|.+++..+..+.++++|++|++++|.+....+..+. .+++|+.|++++|.+++..
T Consensus 108 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 187 (680)
T 1ziw_A 108 SIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFS 187 (680)
T ss_dssp CCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBC
T ss_pred ccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccC
Confidence 77765556677777777777777777766666677777777777777766665555433 4466777777777777666
Q ss_pred CccccCC---------------------------CCCCEEeCCCCCCCCCCcccccCCCC--CCEEEccCCcCCCCCCcc
Q 004413 159 PSGIGEL---------------------------QNLQTLDLSFNNLTGQIPRTLFNIGS--LNYLFLGNNSLSGTLPTQ 209 (755)
Q Consensus 159 p~~~~~l---------------------------~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~p~~ 209 (755)
|..+..+ ++|+.|++++|.+++..|..+..++. |+.|++++|.+++..+..
T Consensus 188 ~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~ 267 (680)
T 1ziw_A 188 PGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDS 267 (680)
T ss_dssp TTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTT
T ss_pred hhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCccc
Confidence 6555433 34555555555555555555555433 666666666665544432
Q ss_pred c--CCCCCEEEeecCcCCCCCccccc
Q 004413 210 K--SENLQNIDLSYNHLSGPFPSWVT 233 (755)
Q Consensus 210 ~--~~~L~~L~Ls~N~l~g~ip~~~~ 233 (755)
+ .++|++|++++|.+++.+|..+.
T Consensus 268 ~~~l~~L~~L~L~~n~l~~~~~~~~~ 293 (680)
T 1ziw_A 268 FAWLPQLEYFFLEYNNIQHLFSHSLH 293 (680)
T ss_dssp TTTCTTCCEEECCSCCBSEECTTTTT
T ss_pred ccCcccccEeeCCCCccCccChhhhc
Confidence 2 25566666666666655554443
No 35
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=4.8e-25 Score=245.38 Aligned_cols=224 Identities=18% Similarity=0.164 Sum_probs=201.8
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+++...+..|..+++|++|+|++|
T Consensus 67 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 146 (440)
T 3zyj_A 67 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNN 146 (440)
T ss_dssp SEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSC
T ss_pred cEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCC
Confidence 57999999999888899999999999999999999888889999999999999999998777778999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCC-CCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNS-FQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIP 159 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 159 (755)
.++...+..|.++++|++|+|++|. +....+..|..+++|++|++++|.+... +.+..+++|+.|+|++|.+++..|
T Consensus 147 ~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~ 224 (440)
T 3zyj_A 147 PIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRP 224 (440)
T ss_dssp CCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC--CCCTTCSSCCEEECTTSCCCEECT
T ss_pred cccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc--cccCCCcccCEEECCCCccCccCh
Confidence 9997667789999999999999954 4433445789999999999999988754 358889999999999999999889
Q ss_pred ccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCC
Q 004413 160 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSG 226 (755)
Q Consensus 160 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g 226 (755)
..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+ .++|+.|+|++|++..
T Consensus 225 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 225 GSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred hhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 999999999999999999998888899999999999999999996655433 4899999999999864
No 36
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.93 E-value=6.1e-25 Score=264.19 Aligned_cols=244 Identities=23% Similarity=0.261 Sum_probs=165.0
Q ss_pred CeEEecCCcCcCCC-chhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchh--hhcCCCCCEEEc
Q 004413 1 MLLSVAHNVFSGSV-PRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPST--YAKLRNMQTLWA 77 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L 77 (755)
++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++.+|.. |.++++|++|+|
T Consensus 51 ~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~L 130 (844)
T 3j0a_A 51 QLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130 (844)
T ss_dssp SEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEE
T ss_pred eEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEEC
Confidence 35666666554444 455666666666666666666555666666666666666666665544443 556666666666
Q ss_pred cCCCCCCCcc-hhhcCCCCCcEEEccCCCCCCCCCcccc--------------------------C--------------
Q 004413 78 SDAPFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPSSLS--------------------------K-------------- 116 (755)
Q Consensus 78 ~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~--------------------------~-------------- 116 (755)
++|.+++..+ ..|+++++|++|+|++|.+++..+..+. .
T Consensus 131 s~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~ 210 (844)
T 3j0a_A 131 SKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILD 210 (844)
T ss_dssp ESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEB
T ss_pred CCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEe
Confidence 6666554433 3455666666666655555433222111 1
Q ss_pred ------------------------------------------------------CCCCCeeecCCCCCCCCChhhhcCCC
Q 004413 117 ------------------------------------------------------LASLDSLRISDIYNVSSSLDFVMSLK 142 (755)
Q Consensus 117 ------------------------------------------------------l~~L~~L~l~~n~~~~~~~~~l~~l~ 142 (755)
.++|+.|++++|.+....+..+..++
T Consensus 211 Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 290 (844)
T 3j0a_A 211 VSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK 290 (844)
T ss_dssp CSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCC
T ss_pred cCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCC
Confidence 13456666666666555666788999
Q ss_pred CCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEee
Q 004413 143 NLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLS 220 (755)
Q Consensus 143 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls 220 (755)
+|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+.+..+..+ .++|+.|+|+
T Consensus 291 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 99999999999998889899999999999999999998888899999999999999999986665433 4899999999
Q ss_pred cCcCCCCCcccccccccccccccccc
Q 004413 221 YNHLSGPFPSWVTSNLQMNLVANNFT 246 (755)
Q Consensus 221 ~N~l~g~ip~~~~~~~~l~l~~n~~~ 246 (755)
+|.+++ ++. +.....+++++|+++
T Consensus 371 ~N~l~~-i~~-~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 371 DNALTT-IHF-IPSIPDIFLSGNKLV 394 (844)
T ss_dssp TCCSCC-CSS-CCSCSEEEEESCCCC
T ss_pred CCCCCc-ccC-CCCcchhccCCCCcc
Confidence 999984 332 223334666666665
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.93 E-value=8.4e-25 Score=251.29 Aligned_cols=105 Identities=23% Similarity=0.172 Sum_probs=70.0
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|.. .+++|++|++++|
T Consensus 55 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N 131 (562)
T 3a79_B 55 KALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFN 131 (562)
T ss_dssp CEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSS
T ss_pred CEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCC
Confidence 35677777777666666777777777777777776666666777777777777777765 34444 5667777777777
Q ss_pred CCCC-CcchhhcCCCCCcEEEccCCCCCC
Q 004413 81 PFTG-KIPDFIGNWTKLKSLRFQGNSFQG 108 (755)
Q Consensus 81 ~l~~-~~p~~~~~l~~L~~L~L~~n~l~~ 108 (755)
++++ .+|..|+++++|++|++++|.+++
T Consensus 132 ~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 132 DFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CccccCchHhhcccCcccEEecCCCcccc
Confidence 7664 334666777777777777766654
No 38
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.93 E-value=2.3e-24 Score=230.26 Aligned_cols=236 Identities=20% Similarity=0.234 Sum_probs=202.0
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++++|.+.+..+..|.++++|++|++++|
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 155 (330)
T 1xku_A 79 HTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTN 155 (330)
T ss_dssp CEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCC
Confidence 58999999999988999999999999999999998 6676655 79999999999999888888999999999999999
Q ss_pred CCCC--CcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCC
Q 004413 81 PFTG--KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSI 158 (755)
Q Consensus 81 ~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 158 (755)
.+.. ..+..|.++++|++|++++|.++ .+|..+. ++|++|++++|.+....+..+..+++|+.|+|++|.+++..
T Consensus 156 ~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 232 (330)
T 1xku_A 156 PLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVD 232 (330)
T ss_dssp CCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEEC
T ss_pred cCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeC
Confidence 9963 67788999999999999999998 4666554 89999999999998888889999999999999999999888
Q ss_pred CccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--------CCCCCEEEeecCcCCC--CC
Q 004413 159 PSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--------SENLQNIDLSYNHLSG--PF 228 (755)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--------~~~L~~L~Ls~N~l~g--~i 228 (755)
+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+ ...++.|++++|++.. ..
T Consensus 233 ~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~ 311 (330)
T 1xku_A 233 NGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQ 311 (330)
T ss_dssp TTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSC
T ss_pred hhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccC
Confidence 888999999999999999999 789899999999999999999996554433 2578899999999863 23
Q ss_pred ccccc---cccccccccc
Q 004413 229 PSWVT---SNLQMNLVAN 243 (755)
Q Consensus 229 p~~~~---~~~~l~l~~n 243 (755)
|..+. ....++|++|
T Consensus 312 ~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 312 PSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp GGGGTTCCCGGGEEC---
T ss_pred ccccccccceeEEEeccc
Confidence 33333 1223555555
No 39
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=7.6e-26 Score=239.83 Aligned_cols=238 Identities=21% Similarity=0.247 Sum_probs=163.2
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCC-CCCccccc-------CCccCcEEEccccCCCCCCchhh--hcCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFS-GTLPPEIG-------NLAKLEQLYLNSWGAGGEIPSTY--AKLRN 71 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~-~~~p~~~~-------~l~~L~~L~L~~n~l~~~~p~~~--~~l~~ 71 (755)
+|++++|.+ .+|..+... |+.|+|++|.+. ..+|..+. ++++|++|+|++|.+++.+|..+ ..+++
T Consensus 47 ~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 122 (312)
T 1wwl_A 47 YLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPD 122 (312)
T ss_dssp THHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCC
T ss_pred eEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCC
Confidence 356677777 667666644 777777777773 44565555 67778888888888777777665 77778
Q ss_pred CCEEEccCCCCCCCcchhhcCC-----CCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCC--Chhhh--cCCC
Q 004413 72 MQTLWASDAPFTGKIPDFIGNW-----TKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSS--SLDFV--MSLK 142 (755)
Q Consensus 72 L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~--~~~~l--~~l~ 142 (755)
|++|+|++|++++. |..++.+ ++|++|+|++|++++..+..+..+++|++|++++|.+... .+..+ ..++
T Consensus 123 L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 201 (312)
T 1wwl_A 123 LNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFP 201 (312)
T ss_dssp CSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCT
T ss_pred ccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCC
Confidence 88888888877765 6666665 7788888888887766667777788888888877765432 12222 6777
Q ss_pred CCCEEEeeCccccCC--CC-ccccCCCCCCEEeCCCCCCCCCCc-ccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEE
Q 004413 143 NLTDLSLRNALITGS--IP-SGIGELQNLQTLDLSFNNLTGQIP-RTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNID 218 (755)
Q Consensus 143 ~L~~L~L~~n~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ 218 (755)
+|++|+|++|.+++. ++ ..+..+++|+.|+|++|++++..| ..+..+++|+.|+|++|.|+ .+|....++|++||
T Consensus 202 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~ 280 (312)
T 1wwl_A 202 TLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSVLD 280 (312)
T ss_dssp TCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEEEEE
T ss_pred CCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCceEEE
Confidence 788888888877621 12 234566788888888888876554 34556777888888888877 55655557788888
Q ss_pred eecCcCCCCCccccc--c-ccccccccccccc
Q 004413 219 LSYNHLSGPFPSWVT--S-NLQMNLVANNFTF 247 (755)
Q Consensus 219 Ls~N~l~g~ip~~~~--~-~~~l~l~~n~~~~ 247 (755)
|++|+|++. |. +. . ...|++++|+++.
T Consensus 281 Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 281 LSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 888888765 54 33 2 2347777777653
No 40
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.92 E-value=2.6e-24 Score=253.15 Aligned_cols=247 Identities=21% Similarity=0.204 Sum_probs=195.9
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|.+++..|..|+++++|++|+|++|.++...+..|+++++|++|+|++|.+.+..|..|.++++|++|++++|
T Consensus 52 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 131 (680)
T 1ziw_A 52 TSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 131 (680)
T ss_dssp SEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSS
T ss_pred cEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCC
Confidence 57999999999999999999999999999999998655557999999999999999998877788999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCcccc--CCCCCCeeecCCCCCCCCChhhhcCC-----------------
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLS--KLASLDSLRISDIYNVSSSLDFVMSL----------------- 141 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~l~~n~~~~~~~~~l~~l----------------- 141 (755)
.+++..+..++++++|++|++++|.+++..+..+. .+++|+.|++++|.+....+..+..+
T Consensus 132 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~ 211 (680)
T 1ziw_A 132 GLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSL 211 (680)
T ss_dssp CCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHH
T ss_pred cccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhh
Confidence 99988888899999999999999999877666554 56889999999988776655544332
Q ss_pred ----------CCCCEEEeeCccccCCCCccccCCCC--CCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc
Q 004413 142 ----------KNLTDLSLRNALITGSIPSGIGELQN--LQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ 209 (755)
Q Consensus 142 ----------~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 209 (755)
++|+.|++++|.+++..|..+..++. |+.|+|++|++++..+..+..+++|+.|++++|.+++..|..
T Consensus 212 ~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 291 (680)
T 1ziw_A 212 TEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 291 (680)
T ss_dssp HHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTT
T ss_pred HHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhh
Confidence 56777888888888777777777654 888888888888777778888888888888888888766654
Q ss_pred c--CCCCCEEEeecCcCCCC-----Ccc----ccc---cccccccccccccc
Q 004413 210 K--SENLQNIDLSYNHLSGP-----FPS----WVT---SNLQMNLVANNFTF 247 (755)
Q Consensus 210 ~--~~~L~~L~Ls~N~l~g~-----ip~----~~~---~~~~l~l~~n~~~~ 247 (755)
+ .++|+.|++++|...+. +|. .+. ....|++++|.++.
T Consensus 292 ~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 292 LHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp TTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred hcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 3 36777777777665542 332 111 22346777777654
No 41
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.92 E-value=4.7e-25 Score=265.18 Aligned_cols=242 Identities=19% Similarity=0.174 Sum_probs=167.2
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.+.+..|..|..+++|++|++++|
T Consensus 269 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 348 (844)
T 3j0a_A 269 RHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348 (844)
T ss_dssp CEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSC
T ss_pred cEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCC
Confidence 46899999999888888999999999999999998888888999999999999999998888888999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCC--------------------CCCC-hhhhc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYN--------------------VSSS-LDFVM 139 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~--------------------~~~~-~~~l~ 139 (755)
.+....+..|.++++|++|+|++|.+++ ++ .+++|+.|++++|.+ .... ...+.
T Consensus 349 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~ 423 (844)
T 3j0a_A 349 HIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLL 423 (844)
T ss_dssp CCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHT
T ss_pred CCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhh
Confidence 9987777788889999999999998873 22 134444444444333 2221 12344
Q ss_pred CCCCCCEEEeeCccccCCCCc-cccCCCCCCEEeCCCCCCC-----CCCcccccCCCCCCEEEccCCcCCCCCCccc--C
Q 004413 140 SLKNLTDLSLRNALITGSIPS-GIGELQNLQTLDLSFNNLT-----GQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--S 211 (755)
Q Consensus 140 ~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~ 211 (755)
.+++|+.|+|++|.+++..+. .+..+++|+.|+|++|.++ +..+..+..+++|+.|+|++|.+++..|..+ .
T Consensus 424 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 503 (844)
T 3j0a_A 424 RVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHL 503 (844)
T ss_dssp TCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSC
T ss_pred cCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccch
Confidence 667777777777777644332 2344566666666666665 2333445556666666666666665555432 3
Q ss_pred CCCCEEEeecCcCCCCCcccccccc-ccccccccccc
Q 004413 212 ENLQNIDLSYNHLSGPFPSWVTSNL-QMNLVANNFTF 247 (755)
Q Consensus 212 ~~L~~L~Ls~N~l~g~ip~~~~~~~-~l~l~~n~~~~ 247 (755)
++|+.|+|++|+|++..|..+...+ .|++++|+++.
T Consensus 504 ~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~ 540 (844)
T 3j0a_A 504 TALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLA 540 (844)
T ss_dssp CSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCC
T ss_pred hhhheeECCCCCCCccChhhhhccccEEECCCCcCCC
Confidence 5666666666666654444443222 46666666553
No 42
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.92 E-value=1.4e-24 Score=249.34 Aligned_cols=255 Identities=21% Similarity=0.181 Sum_probs=189.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCC-CCchhhhcCCCCCEEEccC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGG-EIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~ 79 (755)
++|+|++|+|++..|..|.++++|++|+|++|.++ .+|.. .+++|++|+|++|.+.+ .+|..|.++++|++|++++
T Consensus 79 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~ 155 (562)
T 3a79_B 79 RVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSA 155 (562)
T ss_dssp CEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEEC
T ss_pred cEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCC
Confidence 58999999999988999999999999999999998 67766 89999999999999987 4578999999999999999
Q ss_pred CCCCCCcchhhcCCCCC--cEEEccCCCC--CCCCCccccCCC-------------------------------------
Q 004413 80 APFTGKIPDFIGNWTKL--KSLRFQGNSF--QGPIPSSLSKLA------------------------------------- 118 (755)
Q Consensus 80 n~l~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~p~~l~~l~------------------------------------- 118 (755)
|.+++. .+..+++| ++|++++|.+ ++..|..+..+.
T Consensus 156 n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 232 (562)
T 3a79_B 156 AKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLND 232 (562)
T ss_dssp SBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCS
T ss_pred CccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccc
Confidence 998753 33444444 7777777777 555554444322
Q ss_pred --------------------------------------------CCCeeecCCCCCCCCChhh-----------------
Q 004413 119 --------------------------------------------SLDSLRISDIYNVSSSLDF----------------- 137 (755)
Q Consensus 119 --------------------------------------------~L~~L~l~~n~~~~~~~~~----------------- 137 (755)
+|++|++++|.+....+..
T Consensus 233 ~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~ 312 (562)
T 3a79_B 233 ENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHV 312 (562)
T ss_dssp TTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEE
T ss_pred cccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhc
Confidence 4444444444433211111
Q ss_pred ------------------------------------hcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCC-
Q 004413 138 ------------------------------------VMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTG- 180 (755)
Q Consensus 138 ------------------------------------l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~- 180 (755)
...+++|++|++++|.+++.+|..+..+++|+.|+|++|++++
T Consensus 313 ~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 392 (562)
T 3a79_B 313 KNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNF 392 (562)
T ss_dssp EECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBT
T ss_pred ccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCc
Confidence 1567888899999999888888888888999999999998885
Q ss_pred -CCcccccCCCCCCEEEccCCcCCCCCCccc---CCCCCEEEeecCcCCCCCccccc-ccccccccccccccCCCCCCCC
Q 004413 181 -QIPRTLFNIGSLNYLFLGNNSLSGTLPTQK---SENLQNIDLSYNHLSGPFPSWVT-SNLQMNLVANNFTFDRSNISVF 255 (755)
Q Consensus 181 -~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~~L~~L~Ls~N~l~g~ip~~~~-~~~~l~l~~n~~~~~~~~~~~~ 255 (755)
.+|..+..+++|+.|++++|.+++.+|... .++|+.|++++|++++.+|..+. ....|++++|+++.-+.....+
T Consensus 393 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l 472 (562)
T 3a79_B 393 FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHL 472 (562)
T ss_dssp THHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSS
T ss_pred ccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCC
Confidence 234567888889999999998887566542 37888888888888888887775 4446888888877433333334
Q ss_pred CCcccc
Q 004413 256 PGLHCL 261 (755)
Q Consensus 256 ~~l~~l 261 (755)
+.+..+
T Consensus 473 ~~L~~L 478 (562)
T 3a79_B 473 QALQEL 478 (562)
T ss_dssp CCCSEE
T ss_pred CCCCEE
Confidence 444444
No 43
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.92 E-value=3.5e-24 Score=229.13 Aligned_cols=235 Identities=21% Similarity=0.298 Sum_probs=200.8
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..|..|+++++|++|+|++|.++ .+|..+. ++|++|++++|.+....+..|.++++|++|++++|
T Consensus 81 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n 157 (332)
T 2ft3_A 81 YALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGN 157 (332)
T ss_dssp CEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSC
T ss_pred cEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCC
Confidence 58999999999988999999999999999999998 6776665 89999999999998777778999999999999999
Q ss_pred CCC--CCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCC
Q 004413 81 PFT--GKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSI 158 (755)
Q Consensus 81 ~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 158 (755)
.++ +..+..+..+ +|++|++++|.+++ +|..+. ++|++|++++|.+....+..+..+++|+.|+|++|.+++..
T Consensus 158 ~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 233 (332)
T 2ft3_A 158 PLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE 233 (332)
T ss_dssp CCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC
T ss_pred ccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC
Confidence 996 3677888888 99999999999994 666554 79999999999999888888999999999999999999888
Q ss_pred CccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--------CCCCCEEEeecCcCC--CCC
Q 004413 159 PSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--------SENLQNIDLSYNHLS--GPF 228 (755)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--------~~~L~~L~Ls~N~l~--g~i 228 (755)
+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+ ...|+.|++++|++. +..
T Consensus 234 ~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~ 312 (332)
T 2ft3_A 234 NGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQ 312 (332)
T ss_dssp TTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSC
T ss_pred hhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccC
Confidence 889999999999999999999 789899999999999999999996554432 256899999999987 444
Q ss_pred ccccc--c-ccccccccc
Q 004413 229 PSWVT--S-NLQMNLVAN 243 (755)
Q Consensus 229 p~~~~--~-~~~l~l~~n 243 (755)
|..+. . ...+++++|
T Consensus 313 ~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 313 PATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp GGGGTTBCCSTTEEC---
T ss_pred cccccccchhhhhhcccc
Confidence 44443 1 223555544
No 44
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=4.6e-26 Score=241.51 Aligned_cols=221 Identities=21% Similarity=0.252 Sum_probs=130.7
Q ss_pred eEEecCCcC-cCCCchhhc-------CCCCCCEEEccCccCCCCCcccc--cCCccCcEEEccccCCCCCCchhhhcC--
Q 004413 2 LLSVAHNVF-SGSVPRELG-------NLKELTVLSFGNNNFSGTLPPEI--GNLAKLEQLYLNSWGAGGEIPSTYAKL-- 69 (755)
Q Consensus 2 ~L~Ls~n~l-~~~~p~~l~-------~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-- 69 (755)
+|+|++|.+ ...+|..+. ++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..+..+
T Consensus 67 ~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~ 145 (312)
T 1wwl_A 67 SLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQ 145 (312)
T ss_dssp HCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT
T ss_pred hcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHH
Confidence 355666666 344555444 56666666666666666666654 5666666666666666555 5555555
Q ss_pred ---CCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCC--CCccc--cCCCCCCeeecCCCCCCCC---Chhhhc
Q 004413 70 ---RNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGP--IPSSL--SKLASLDSLRISDIYNVSS---SLDFVM 139 (755)
Q Consensus 70 ---~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~p~~l--~~l~~L~~L~l~~n~~~~~---~~~~l~ 139 (755)
++|++|+|++|++++..+..|+++++|++|+|++|++.+. .+..+ ..+++|++|++++|.+... ....+.
T Consensus 146 ~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 225 (312)
T 1wwl_A 146 WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAA 225 (312)
T ss_dssp TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHH
T ss_pred hhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHh
Confidence 6666666666666655556666666666666666665543 22223 5666666666666665521 112344
Q ss_pred CCCCCCEEEeeCccccCCCC-ccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEE
Q 004413 140 SLKNLTDLSLRNALITGSIP-SGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNID 218 (755)
Q Consensus 140 ~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ 218 (755)
.+++|+.|+|++|.+++.+| ..+..+++|+.|+|++|+++ .+|..+. ++|+.|+|++|+|++.......++|++|+
T Consensus 226 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p~~~~l~~L~~L~ 302 (312)
T 1wwl_A 226 ARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNPSPDELPQVGNLS 302 (312)
T ss_dssp TTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCCCTTTSCEEEEEE
T ss_pred cCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCChhHhhCCCCCEEe
Confidence 56666666666666665553 34445566666666666666 5555554 56666666666666542222235666666
Q ss_pred eecCcCCC
Q 004413 219 LSYNHLSG 226 (755)
Q Consensus 219 Ls~N~l~g 226 (755)
|++|+|++
T Consensus 303 L~~N~l~~ 310 (312)
T 1wwl_A 303 LKGNPFLD 310 (312)
T ss_dssp CTTCTTTC
T ss_pred ccCCCCCC
Confidence 66666654
No 45
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.92 E-value=6.3e-25 Score=251.59 Aligned_cols=132 Identities=21% Similarity=0.205 Sum_probs=113.1
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCC-CCchhhhcCCCCCEEEccC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGG-EIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~ 79 (755)
++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++ ..|..+.++++|++|++++
T Consensus 53 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~ 132 (549)
T 2z81_A 53 QVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN 132 (549)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEE
T ss_pred cEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCC
Confidence 589999999998888999999999999999999998777779999999999999999986 4567899999999999999
Q ss_pred CCCCCCcc-hhhcCCCCCcEEEccCCCCCCCCCccccC------------------------CCCCCeeecCCCCCCC
Q 004413 80 APFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPSSLSK------------------------LASLDSLRISDIYNVS 132 (755)
Q Consensus 80 n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~------------------------l~~L~~L~l~~n~~~~ 132 (755)
|.+.+.+| ..|.++++|++|++++|.+++..|..+.. +++|++|++++|.+..
T Consensus 133 n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 133 VETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp SSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred CccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 98555665 57999999999999999999877776654 5667777777776554
No 46
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.92 E-value=9.7e-25 Score=235.55 Aligned_cols=221 Identities=16% Similarity=0.194 Sum_probs=179.8
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
+.++++|+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++++|+
T Consensus 35 ~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (353)
T 2z80_A 35 ICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111 (353)
T ss_dssp EEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCc
Confidence 4678888888 6677665 599999999999987666689999999999999999988888889999999999999999
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCC-ccccCCCCCCeeecCCCC-CCCCChhhhcCCCCCCEEEeeCccccCCCC
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIP-SSLSKLASLDSLRISDIY-NVSSSLDFVMSLKNLTDLSLRNALITGSIP 159 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~n~-~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 159 (755)
+++..+..|.++++|++|++++|+++...+ ..+..+++|++|++++|. +....+..+..+++|+.|++++|.+++..|
T Consensus 112 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (353)
T 2z80_A 112 LSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEP 191 (353)
T ss_dssp CSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCH
Confidence 996555568999999999999999984333 378899999999999984 555566788899999999999999998889
Q ss_pred ccccCCCCCCEEeCCCCCCCCCCcc-cccCCCCCCEEEccCCcCCCCCCccc-----CCCCCEEEeecCcCCC
Q 004413 160 SGIGELQNLQTLDLSFNNLTGQIPR-TLFNIGSLNYLFLGNNSLSGTLPTQK-----SENLQNIDLSYNHLSG 226 (755)
Q Consensus 160 ~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~~-----~~~L~~L~Ls~N~l~g 226 (755)
..+..+++|+.|++++|.++. +|. .+..+++|+.|++++|.+++..+... ...++.++|++|.+++
T Consensus 192 ~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~ 263 (353)
T 2z80_A 192 KSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD 263 (353)
T ss_dssp TTTTTCSEEEEEEEECSCSTT-HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCH
T ss_pred HHHhccccCCeecCCCCcccc-chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccC
Confidence 999999999999999999974 444 44568999999999999987543321 2345555555555543
No 47
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=240.33 Aligned_cols=246 Identities=17% Similarity=0.163 Sum_probs=195.1
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|++++|
T Consensus 55 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 134 (353)
T 2z80_A 55 KSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGN 134 (353)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTC
T ss_pred cEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCC
Confidence 57999999999877778999999999999999999877888999999999999999998766666999999999999999
Q ss_pred CCCCCcch--hhcCCCCCcEEEccCC-CCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCC
Q 004413 81 PFTGKIPD--FIGNWTKLKSLRFQGN-SFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGS 157 (755)
Q Consensus 81 ~l~~~~p~--~~~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 157 (755)
+++. +|. .|.++++|++|++++| .+....+..+..+++|++|++++|.+....+..+..+++|++|++++|.+...
T Consensus 135 ~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 213 (353)
T 2z80_A 135 PYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILL 213 (353)
T ss_dssp CCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTH
T ss_pred CCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccc
Confidence 9994 554 7899999999999999 57766677899999999999999998888888899999999999999998744
Q ss_pred CCccccCCCCCCEEeCCCCCCCCCCccccc---CCCCCCEEEccCCcCCCC----CCcc--cCCCCCEEEeecCcCCCCC
Q 004413 158 IPSGIGELQNLQTLDLSFNNLTGQIPRTLF---NIGSLNYLFLGNNSLSGT----LPTQ--KSENLQNIDLSYNHLSGPF 228 (755)
Q Consensus 158 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~----~p~~--~~~~L~~L~Ls~N~l~g~i 228 (755)
....+..+++|+.|++++|.+++..+..+. ....++.++++++.+++. +|.. ..++|+.|+|++|+|+ .+
T Consensus 214 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i 292 (353)
T 2z80_A 214 LEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SV 292 (353)
T ss_dssp HHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CC
T ss_pred hhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-cc
Confidence 333455689999999999999875443332 355666777777766642 2221 2356777777777776 55
Q ss_pred cccc-c--c-cccccccccccccC
Q 004413 229 PSWV-T--S-NLQMNLVANNFTFD 248 (755)
Q Consensus 229 p~~~-~--~-~~~l~l~~n~~~~~ 248 (755)
|..+ . . ...|++++|+++++
T Consensus 293 ~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 293 PDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CHHHHhcCCCCCEEEeeCCCccCc
Confidence 5543 2 2 22467777776654
No 48
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.91 E-value=6e-24 Score=247.50 Aligned_cols=130 Identities=21% Similarity=0.204 Sum_probs=107.7
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|||++|+|++..+..|.++++|++|+|++|+|++..|.+|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 55 ~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N 134 (635)
T 4g8a_A 55 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 134 (635)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTS
T ss_pred CEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCC
Confidence 57899999998777788999999999999999998777778889999999999999887776778888999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCC-CCCccccCCCCCCeeecCCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQG-PIPSSLSKLASLDSLRISDIYN 130 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~~ 130 (755)
++++..+..|+++++|++|+|++|.++. ..|..+..+++|++|++++|.+
T Consensus 135 ~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 135 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp CCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred cCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 8887666678888888888888888864 3567777788888887776653
No 49
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.91 E-value=5.1e-24 Score=233.15 Aligned_cols=244 Identities=18% Similarity=0.153 Sum_probs=201.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|.++++|++|++++|
T Consensus 72 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n 151 (390)
T 3o6n_A 72 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 151 (390)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCC
Confidence 57999999999887889999999999999999999877888999999999999999998655556799999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCC-------------------------------------CCCCee
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKL-------------------------------------ASLDSL 123 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-------------------------------------~~L~~L 123 (755)
.+++..+..|.++++|++|++++|.+++.....+..+ ++|+.|
T Consensus 152 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L 231 (390)
T 3o6n_A 152 NLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTIL 231 (390)
T ss_dssp CCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEE
T ss_pred ccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEE
Confidence 9998778889999999999999999885422222221 245555
Q ss_pred ecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCC
Q 004413 124 RISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLS 203 (755)
Q Consensus 124 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 203 (755)
++++|.+... +.+..+++|+.|+|++|.+++..|..+..+++|+.|+|++|++++ +|..+..+++|+.|++++|+++
T Consensus 232 ~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 232 KLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred ECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce
Confidence 5555555433 568899999999999999998889999999999999999999994 6777788999999999999999
Q ss_pred CCCCcc--cCCCCCEEEeecCcCCCCCcccccccccccccccccccC
Q 004413 204 GTLPTQ--KSENLQNIDLSYNHLSGPFPSWVTSNLQMNLVANNFTFD 248 (755)
Q Consensus 204 ~~~p~~--~~~~L~~L~Ls~N~l~g~ip~~~~~~~~l~l~~n~~~~~ 248 (755)
+ +|.. ..++|+.|+|++|+|+..-...+.....|++++|+++++
T Consensus 309 ~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 309 H-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp C-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHH
T ss_pred e-cCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccch
Confidence 5 4433 248999999999999865333333445699999999865
No 50
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.91 E-value=3.6e-24 Score=246.44 Aligned_cols=175 Identities=21% Similarity=0.196 Sum_probs=146.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...|..|.++++|++|++++|
T Consensus 31 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 110 (570)
T 2z63_A 31 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110 (570)
T ss_dssp CEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccc
Confidence 57999999999888889999999999999999999777888999999999999999998888889999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCC-CCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCC----CEEEeeCcccc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQG-PIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNL----TDLSLRNALIT 155 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L----~~L~L~~n~l~ 155 (755)
+++...+..|+++++|++|++++|.+++ .+|..+.++++|++|++++|.+....+..+..+.+| ..|++++|.++
T Consensus 111 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~ 190 (570)
T 2z63_A 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (570)
T ss_dssp CCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred ccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCce
Confidence 9986555578999999999999999986 478999999999999999998887766666666666 77888887776
Q ss_pred CCCCccccCCCCCCEEeCCCC
Q 004413 156 GSIPSGIGELQNLQTLDLSFN 176 (755)
Q Consensus 156 ~~~p~~~~~l~~L~~L~Ls~N 176 (755)
+..+..+..+ +|+.|++++|
T Consensus 191 ~~~~~~~~~~-~L~~L~l~~n 210 (570)
T 2z63_A 191 FIQPGAFKEI-RLHKLTLRNN 210 (570)
T ss_dssp EECTTTTTTC-EEEEEEEESC
T ss_pred ecCHHHhccC-cceeEecccc
Confidence 6555544433 4555555544
No 51
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.91 E-value=1e-23 Score=242.69 Aligned_cols=136 Identities=17% Similarity=0.158 Sum_probs=119.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|.++...+..|.++++|++|++++|
T Consensus 55 ~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n 134 (570)
T 2z63_A 55 QVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN 134 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSS
T ss_pred eEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCC
Confidence 58999999999888889999999999999999999777889999999999999999998766667999999999999999
Q ss_pred CCCC-CcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCC----CeeecCCCCCCCCChh
Q 004413 81 PFTG-KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASL----DSLRISDIYNVSSSLD 136 (755)
Q Consensus 81 ~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L----~~L~l~~n~~~~~~~~ 136 (755)
.+++ .+|..|+++++|++|++++|.+++..+..+..+++| ..|++++|.+....+.
T Consensus 135 ~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~ 195 (570)
T 2z63_A 135 LIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG 195 (570)
T ss_dssp CCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT
T ss_pred ccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHH
Confidence 9986 579999999999999999999997777778777777 7888888776554443
No 52
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.91 E-value=4.2e-23 Score=230.11 Aligned_cols=222 Identities=21% Similarity=0.134 Sum_probs=181.8
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|+|++. | ++.+++|++|+|++|.+++. + ++++++|++|++++|.+++. | +..+++|++|++++|
T Consensus 67 ~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N 137 (457)
T 3bz5_A 67 TKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARN 137 (457)
T ss_dssp SEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTS
T ss_pred CEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCC
Confidence 5899999999975 4 89999999999999999864 4 89999999999999999874 4 889999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
++++ ++ ++++++|++|++++|...+.+ .+..+++|+.|++++|.+.... +..+++|+.|++++|.+++.
T Consensus 138 ~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~--- 206 (457)
T 3bz5_A 138 TLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKL--- 206 (457)
T ss_dssp CCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCC---
T ss_pred ccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCCee---
Confidence 9996 33 888999999999999665555 4788999999999999887753 77889999999999999865
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCC----------CCCEEEeecCcCCCCCcc
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSE----------NLQNIDLSYNHLSGPFPS 230 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~----------~L~~L~Ls~N~l~g~ip~ 230 (755)
.++.+++|+.|++++|++++ +| +..+++|+.|++++|++++..+. .++ +|+.|++++|.+.|.+|.
T Consensus 207 ~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~ 282 (457)
T 3bz5_A 207 DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA 282 (457)
T ss_dssp CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEEC
T ss_pred ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCcccc
Confidence 48889999999999999996 66 78899999999999999975433 333 455666777777777774
Q ss_pred ccc-ccccccccccccc
Q 004413 231 WVT-SNLQMNLVANNFT 246 (755)
Q Consensus 231 ~~~-~~~~l~l~~n~~~ 246 (755)
.-. ....|++++|.+.
T Consensus 283 ~~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 283 EGCRKIKELDVTHNTQL 299 (457)
T ss_dssp TTCTTCCCCCCTTCTTC
T ss_pred cccccCCEEECCCCccc
Confidence 322 3335788887643
No 53
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=6.3e-24 Score=220.39 Aligned_cols=218 Identities=20% Similarity=0.205 Sum_probs=178.1
Q ss_pred ecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCC
Q 004413 5 VAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTG 84 (755)
Q Consensus 5 Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 84 (755)
+..+.+.... .+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+.+. ..+..+++|++|++++|.+++
T Consensus 26 l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~ 99 (272)
T 3rfs_A 26 LKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS 99 (272)
T ss_dssp HTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCC
T ss_pred hcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCc
Confidence 4445554332 3567788999999999886 333 588889999999999988763 478889999999999999987
Q ss_pred CcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccC
Q 004413 85 KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGE 164 (755)
Q Consensus 85 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 164 (755)
..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+....+..+..+++|+.|++++|.+++..+..+..
T Consensus 100 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 179 (272)
T 3rfs_A 100 LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDK 179 (272)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcC
Confidence 77777888999999999999998777777888999999999988888777777888889999999999988777777888
Q ss_pred CCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCccccc
Q 004413 165 LQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT 233 (755)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~ 233 (755)
+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+.. ++|+.|+++.|.++|.+|.+++
T Consensus 180 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-----~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 180 LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-----PGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT-----TTTHHHHHHHHHTGGGBBCTTS
T ss_pred CccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC-----cHHHHHHHHHHhCCCcccCccc
Confidence 899999999999998777777888889999999999887554 3678888888888888888765
No 54
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.90 E-value=6.5e-23 Score=229.88 Aligned_cols=232 Identities=27% Similarity=0.325 Sum_probs=146.7
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.|++++|.+.. +| .+..+++|++|+|++|.+++. +. +.++++|++|++++|.+.+..+ +.++++|++|++++|.
T Consensus 50 ~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~ 123 (466)
T 1o6v_A 50 TLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 123 (466)
T ss_dssp EEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCC
Confidence 45555555542 33 244555555555555555432 22 5555555555555555543322 5555555555555555
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCC-------------------CCccccCCCCCCeeecCCCCCCCCChhhhcCCC
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGP-------------------IPSSLSKLASLDSLRISDIYNVSSSLDFVMSLK 142 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~-------------------~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~ 142 (755)
+++.. . +.++++|++|++++|.+++. ....+.++++|+.|++++|.+... ..+..++
T Consensus 124 l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~ 199 (466)
T 1o6v_A 124 ITDID-P-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLT 199 (466)
T ss_dssp CCCCG-G-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCT
T ss_pred CCCCh-H-HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCC
Confidence 54322 1 44555555555555544421 012367788888899988876554 4578888
Q ss_pred CCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecC
Q 004413 143 NLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYN 222 (755)
Q Consensus 143 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N 222 (755)
+|+.|++++|.+++..+ ++.+++|+.|++++|++++ + ..+..+++|+.|++++|.+++..+....++|+.|++++|
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n 275 (466)
T 1o6v_A 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGAN 275 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSS
T ss_pred CCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCC
Confidence 99999999998886655 6778889999999998884 3 367788889999999998887766555688888888888
Q ss_pred cCCCCCccccc--ccccccccccccccC
Q 004413 223 HLSGPFPSWVT--SNLQMNLVANNFTFD 248 (755)
Q Consensus 223 ~l~g~ip~~~~--~~~~l~l~~n~~~~~ 248 (755)
.+++..| ... ....|++++|.++..
T Consensus 276 ~l~~~~~-~~~l~~L~~L~L~~n~l~~~ 302 (466)
T 1o6v_A 276 QISNISP-LAGLTALTNLELNENQLEDI 302 (466)
T ss_dssp CCCCCGG-GTTCTTCSEEECCSSCCSCC
T ss_pred ccCcccc-ccCCCccCeEEcCCCcccCc
Confidence 8886544 211 233578888877643
No 55
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=2.2e-23 Score=216.81 Aligned_cols=223 Identities=20% Similarity=0.192 Sum_probs=182.0
Q ss_pred EEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCC
Q 004413 3 LSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPF 82 (755)
Q Consensus 3 L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 82 (755)
++-.+.++. .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+.+..+..|.++++|++|++++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344455555 5666554 5899999999999877777899999999999999999877777899999999999999999
Q ss_pred CCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCC-hhhhcCCCCCCEEEeeCccccCCCCcc
Q 004413 83 TGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSS-LDFVMSLKNLTDLSLRNALITGSIPSG 161 (755)
Q Consensus 83 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~ 161 (755)
++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+.... +..+..+++|+.|+|++|.+++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 9777788999999999999999999777767899999999999998887754 667888999999999999998777777
Q ss_pred ccCCCCCC----EEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc--cCCCCCEEEeecCcCCCCCc
Q 004413 162 IGELQNLQ----TLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFP 229 (755)
Q Consensus 162 ~~~l~~L~----~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~~L~~L~Ls~N~l~g~ip 229 (755)
+..+++|+ .|++++|.+++..+ ......+|+.|++++|++++..+.. ..++|+.|+|++|++++..|
T Consensus 169 ~~~l~~L~~l~l~L~ls~n~l~~~~~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQP-GAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GHHHHTCTTCCEEEECCSSCCCEECT-TSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred hhhhhhccccceeeecCCCcccccCc-cccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 77766666 89999999985444 4444558999999999998655443 24789999999999987765
No 56
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.1e-22 Score=210.71 Aligned_cols=204 Identities=20% Similarity=0.196 Sum_probs=155.6
Q ss_pred CCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEcc
Q 004413 23 ELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQ 102 (755)
Q Consensus 23 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 102 (755)
+++.++++++.++ .+|..+. ++|++|+|++|++....+..|.++++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5677888888777 4665554 577888888888776666677788888888888888775555556777888888888
Q ss_pred CCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCC
Q 004413 103 GNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQI 182 (755)
Q Consensus 103 ~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 182 (755)
+|.+++..+..+..+++|++|++++|.+....+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 88887665666777888888888887777777777788888888888888888666666888888888888888888766
Q ss_pred cccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCc
Q 004413 183 PRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFP 229 (755)
Q Consensus 183 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip 229 (755)
+..+..+++|+.|+|++|++++..+..+ .++|+.|+|++|++....+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 6678888888888888888886554332 3788899999998876543
No 57
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.90 E-value=1.4e-22 Score=217.96 Aligned_cols=210 Identities=25% Similarity=0.334 Sum_probs=130.8
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..+ +..+++|++|+|++|.++. ++ .+.++++|++|++++|.+.+. +. +..+++|++|++++|
T Consensus 69 ~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n 142 (347)
T 4fmz_A 69 EYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNLGAN 142 (347)
T ss_dssp CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTTC
T ss_pred cEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEECCCC
Confidence 578899998885433 8888999999999998874 44 588889999999998888654 33 778888888888888
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+..... +..+++|+.|++++|.+.+..+
T Consensus 143 ~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 216 (347)
T 4fmz_A 143 HNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP- 216 (347)
T ss_dssp TTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred CCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-
Confidence 6554443 37777778888887777764322 6677777777777776554332 4455555555555555543322
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCC
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLS 225 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~ 225 (755)
+..+++|+.|++++|.+++. +. +..+++|+.|++++|.+++.......++|+.|++++|.++
T Consensus 217 -~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~ 278 (347)
T 4fmz_A 217 -VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQIS 278 (347)
T ss_dssp -GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred -hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccC
Confidence 44445555555555555432 22 4444555555555554443211122244445555555444
No 58
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=3e-23 Score=215.75 Aligned_cols=206 Identities=20% Similarity=0.184 Sum_probs=182.7
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|++++|
T Consensus 31 ~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 110 (276)
T 2z62_A 31 KNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCC
Confidence 57999999999888889999999999999999999777778999999999999999998888889999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCC-CCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCC----EEEeeCcccc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGP-IPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLT----DLSLRNALIT 155 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~----~L~L~~n~l~ 155 (755)
.+++..+..+.++++|++|++++|.+++. +|..+..+++|++|++++|.+.......+..+.+|+ .|++++|.++
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~ 190 (276)
T 2z62_A 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (276)
T ss_dssp CCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC
T ss_pred CccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccc
Confidence 99977776899999999999999999863 689999999999999999999887776666666665 8999999999
Q ss_pred CCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 004413 156 GSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLP 207 (755)
Q Consensus 156 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 207 (755)
+..+..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|++++..+
T Consensus 191 ~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 191 FIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 66655554 4589999999999997666677899999999999999986544
No 59
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.89 E-value=4.5e-22 Score=221.81 Aligned_cols=221 Identities=19% Similarity=0.153 Sum_probs=177.7
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|.|++. | .++.+++|++|+|++|.+++ +| ++.+++|++|+|++|.+++. + +.++++|++|++++|
T Consensus 45 ~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N 116 (457)
T 3bz5_A 45 TSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTN 116 (457)
T ss_dssp CEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSS
T ss_pred CEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCC
Confidence 5789999999864 5 68899999999999999986 34 88899999999999998774 3 888999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
++++ ++ ++.+++|++|++++|++++. .+..+++|+.|++++|...... .+..+++|+.|++++|.+++ +|
T Consensus 117 ~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~- 186 (457)
T 3bz5_A 117 KLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD- 186 (457)
T ss_dssp CCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC-
T ss_pred cCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec-
Confidence 9886 44 88889999999999999863 3788899999999988544433 46788899999999999986 44
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCcccccccccccc
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSNLQMNL 240 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~~~l~l 240 (755)
+..+++|+.|++++|++++. .+..+++|+.|++++|++++ +|....++|+.|++++|+|++..+..+.....|++
T Consensus 187 -l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l 261 (457)
T 3bz5_A 187 -VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-IDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHC 261 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSCCCCTTCTTCCEEEC
T ss_pred -cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cCccccCCCCEEEeeCCcCCCcCHHHCCCCCEEec
Confidence 78889999999999999864 37888999999999999997 56556688999999999998765544443333444
Q ss_pred cccc
Q 004413 241 VANN 244 (755)
Q Consensus 241 ~~n~ 244 (755)
..|+
T Consensus 262 ~~n~ 265 (457)
T 3bz5_A 262 IQTD 265 (457)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 4443
No 60
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.89 E-value=1.1e-22 Score=226.65 Aligned_cols=226 Identities=20% Similarity=0.286 Sum_probs=110.9
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccC-------------cEEEccccCCCCC------
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKL-------------EQLYLNSWGAGGE------ 61 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~------ 61 (755)
++|++++|++ |.+|.+|+++++|++|++++|.+.+.+|..++++.+| ++|++++|++++.
T Consensus 14 ~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~~~ 92 (454)
T 1jl5_A 14 QEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPH 92 (454)
T ss_dssp ---------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCCTT
T ss_pred hhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCcCC
Confidence 4688899999 7899889999999999999998888888888877653 6666666665441
Q ss_pred -------------CchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCC
Q 004413 62 -------------IPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDI 128 (755)
Q Consensus 62 -------------~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 128 (755)
+|.. +++|++|++++|++++ ++.. .++|++|++++|.+++ +| .+..+++|++|++++|
T Consensus 93 L~~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 93 LESLVASCNSLTELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNN 163 (454)
T ss_dssp CSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CCEEEccCCcCCccccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCC
Confidence 2211 1333444444443332 1110 1466677777776664 55 4667777777777766
Q ss_pred CCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCC-------------------CCcccccCC
Q 004413 129 YNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTG-------------------QIPRTLFNI 189 (755)
Q Consensus 129 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-------------------~~p~~l~~l 189 (755)
.+.... . ...+|++|++++|.+++ +| .++.+++|+.|++++|++++ .+| .+..+
T Consensus 164 ~l~~lp-~---~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~n~l~~lp-~~~~l 236 (454)
T 1jl5_A 164 SLKKLP-D---LPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELP-ELQNL 236 (454)
T ss_dssp CCSCCC-C---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCC-CCTTC
T ss_pred cCcccC-C---CcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCcCcccEEECcCCcCCccc-ccCCC
Confidence 655421 1 12355566666665554 33 35555555555555555543 333 24455
Q ss_pred CCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCcccccccccccccccccc
Q 004413 190 GSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSNLQMNLVANNFT 246 (755)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~~~l~l~~n~~~ 246 (755)
++|+.|++++|++++ +|. ..++|+.|++++|++++ +|........|++++|.++
T Consensus 237 ~~L~~L~l~~N~l~~-l~~-~~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~ 290 (454)
T 1jl5_A 237 PFLTTIYADNNLLKT-LPD-LPPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFS 290 (454)
T ss_dssp TTCCEEECCSSCCSS-CCS-CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred CCCCEEECCCCcCCc-ccc-cccccCEEECCCCcccc-cCcccCcCCEEECcCCccC
Confidence 555555555555553 222 22455555555555553 4443323334555555544
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.89 E-value=3.6e-22 Score=214.74 Aligned_cols=245 Identities=22% Similarity=0.289 Sum_probs=201.2
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|.++. +| .+.++++|++|+|++|.+++ ++. +..+++|++|++++|.....++ .+..+++|++|++++|
T Consensus 91 ~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~ 165 (347)
T 4fmz_A 91 TNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTES 165 (347)
T ss_dssp CEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSS
T ss_pred CEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCC
Confidence 589999999986 34 69999999999999999984 444 8999999999999997766555 4899999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
.+.+..+ +..+++|++|++++|.+.+. +. +..+++|+.|++++|.+..... +..+++|+.|++++|.+++..+
T Consensus 166 ~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 166 KVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp CCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred CcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-
Confidence 9985443 88999999999999999853 33 8889999999999988776544 7889999999999999985544
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCccccc---cccc
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT---SNLQ 237 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~---~~~~ 237 (755)
+..+++|+.|++++|.+++ + ..+..+++|+.|++++|.+++.......++|+.|++++|++++..|..+. ....
T Consensus 239 -~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 315 (347)
T 4fmz_A 239 -LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTT 315 (347)
T ss_dssp -GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSE
T ss_pred -hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCE
Confidence 8899999999999999985 3 46889999999999999999753334458999999999999988887665 2346
Q ss_pred ccccccccccCCCCCCCCCCcccc
Q 004413 238 MNLVANNFTFDRSNISVFPGLHCL 261 (755)
Q Consensus 238 l~l~~n~~~~~~~~~~~~~~l~~l 261 (755)
|++++|+++.... ...++.+..+
T Consensus 316 L~L~~n~l~~~~~-~~~l~~L~~L 338 (347)
T 4fmz_A 316 LFLSQNHITDIRP-LASLSKMDSA 338 (347)
T ss_dssp EECCSSSCCCCGG-GGGCTTCSEE
T ss_pred EEccCCccccccC-hhhhhcccee
Confidence 8999999875432 3344444443
No 62
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.89 E-value=1.3e-23 Score=236.37 Aligned_cols=210 Identities=20% Similarity=0.169 Sum_probs=96.9
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
+|+|++|.|++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++.. ..++|++|++++|.
T Consensus 38 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~~N~ 110 (487)
T 3oja_A 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNN 110 (487)
T ss_dssp EEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSC
T ss_pred EEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECcCCc
Confidence 44555555554444445555555555555555543322 444555555555555443211 12445555555555
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhc-CCCCCCEEEeeCccccCCCCc
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVM-SLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~-~l~~L~~L~L~~n~l~~~~p~ 160 (755)
+++..+. .+++|+.|+|++|.+++..|..+..+++|+.|++++|.+....+..+. .+++|+.|+|++|.+++..+
T Consensus 111 l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~- 186 (487)
T 3oja_A 111 ISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG- 186 (487)
T ss_dssp CCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-
T ss_pred CCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc-
Confidence 5433322 234455555555555544444444555555555555544443333332 44555555555555543311
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc--cCCCCCEEEeecCcCC
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLS 225 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~~L~~L~Ls~N~l~ 225 (755)
+..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++ +|.. ..++|+.|++++|++.
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred -cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 2234555555555555553 22234445555555555555543 2221 1244555555555554
No 63
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.89 E-value=1.4e-23 Score=222.91 Aligned_cols=219 Identities=21% Similarity=0.191 Sum_probs=160.7
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|++++..|..|.++++|++|+|++|.+++..+ +..+++|++|+|++|.+++. ..+++|++|++++|
T Consensus 37 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-----~~~~~L~~L~l~~n 109 (317)
T 3o53_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-----LVGPSIETLHAANN 109 (317)
T ss_dssp SEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-----EECTTCCEEECCSS
T ss_pred CEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-----cCCCCcCEEECCCC
Confidence 467888888887777778888888888888888875443 77888888888888877532 23477888888888
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhh-cCCCCCCEEEeeCccccCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFV-MSLKNLTDLSLRNALITGSIP 159 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l-~~l~~L~~L~L~~n~l~~~~p 159 (755)
.+++..+. .+++|++|++++|.+++..+..+..+++|++|++++|.+....+..+ ..+++|++|+|++|.+++. +
T Consensus 110 ~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 185 (317)
T 3o53_A 110 NISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (317)
T ss_dssp CCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred ccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c
Confidence 87754433 35678888888888887666677778888888888887776655554 4678888888888888754 2
Q ss_pred ccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCC-CCCccccc
Q 004413 160 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLS-GPFPSWVT 233 (755)
Q Consensus 160 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~-g~ip~~~~ 233 (755)
....+++|+.|+|++|++++ +|..+..+++|+.|++++|++++ +|... .++|+.|++++|+++ +.+|.++.
T Consensus 186 -~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 186 -GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp -CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred -cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 23347888888888888884 55557788888888888888874 44432 367888888888887 56666655
No 64
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.89 E-value=6.2e-22 Score=221.90 Aligned_cols=233 Identities=27% Similarity=0.313 Sum_probs=154.8
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|.+++..| +.++++|++|+|++|.+++..+ +.++++|++|+|++|.+.+..+ +.++++|++|++++|
T Consensus 71 ~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n 144 (466)
T 1o6v_A 71 TQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSN 144 (466)
T ss_dssp CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEE
T ss_pred CEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCC
Confidence 578888888886544 7888888888888888875433 7888888888888888765432 777777777777777
Q ss_pred CCCCCcc-------------------hhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCC
Q 004413 81 PFTGKIP-------------------DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSL 141 (755)
Q Consensus 81 ~l~~~~p-------------------~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l 141 (755)
.+.+... ..+.++++|++|++++|.+++. ..+..+++|++|++++|.+....+ +..+
T Consensus 145 ~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 220 (466)
T 1o6v_A 145 TISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGIL 220 (466)
T ss_dssp EECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGC
T ss_pred ccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--cccc
Confidence 7653210 1256677788888888887742 347777888888888777655433 5566
Q ss_pred CCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeec
Q 004413 142 KNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSY 221 (755)
Q Consensus 142 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~ 221 (755)
++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+....++|+.|++++
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~ 296 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 296 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCS
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcCC
Confidence 7777777777776643 246666777777777777764333 666677777777777776555444446677777777
Q ss_pred CcCCCCCccccc-cccccccccccccc
Q 004413 222 NHLSGPFPSWVT-SNLQMNLVANNFTF 247 (755)
Q Consensus 222 N~l~g~ip~~~~-~~~~l~l~~n~~~~ 247 (755)
|++++..|-.-. ....|++++|+++.
T Consensus 297 n~l~~~~~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 297 NQLEDISPISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp SCCSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred CcccCchhhcCCCCCCEEECcCCcCCC
Confidence 777654431111 22346666666654
No 65
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.1e-21 Score=203.25 Aligned_cols=202 Identities=21% Similarity=0.279 Sum_probs=178.6
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
+.+++++++++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.++...+..|.++++|++|++++|
T Consensus 19 ~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n 95 (270)
T 2o6q_A 19 NSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN 95 (270)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSS
T ss_pred CEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCC
Confidence 36899999998 5776555 68999999999999766778999999999999999998766667899999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
.+++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|.+.......+..+++|+.|+|++|.+++..+.
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 96 KLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 99977777789999999999999999987788889999999999999998888777889999999999999999987777
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCC
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGT 205 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 205 (755)
.|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+...
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 889999999999999999976666788899999999999998744
No 66
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=7.3e-22 Score=206.61 Aligned_cols=204 Identities=23% Similarity=0.191 Sum_probs=177.1
Q ss_pred hhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCC
Q 004413 17 ELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKL 96 (755)
Q Consensus 17 ~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 96 (755)
.+.++++|+.+++++|.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|.+++ ++.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC
Confidence 3678899999999999998 6776664 689999999999988888899999999999999999985 4433 789999
Q ss_pred cEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCC
Q 004413 97 KSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFN 176 (755)
Q Consensus 97 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 176 (755)
++|+|++|.++ .+|..+..+++|+.|++++|.+....+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 78888999999999999999998888888999999999999999999877778889999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCCcccC--CCCCEEEeecCcCCCC
Q 004413 177 NLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKS--ENLQNIDLSYNHLSGP 227 (755)
Q Consensus 177 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~Ls~N~l~g~ 227 (755)
++++..+..+..+++|+.|+|++|+++ .+|.... .+|+.|+|++|++...
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 999655566788999999999999998 4555443 6799999999998753
No 67
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=214.32 Aligned_cols=199 Identities=21% Similarity=0.202 Sum_probs=103.1
Q ss_pred ccCcEEEccccCCCCCCchhh--hcCCCCCEEEccCCCCCCCcc----hhhcCCCCCcEEEccCCCCCCCCCccccCCCC
Q 004413 46 AKLEQLYLNSWGAGGEIPSTY--AKLRNMQTLWASDAPFTGKIP----DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLAS 119 (755)
Q Consensus 46 ~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 119 (755)
++|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+++..+..+..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 445566665555555555554 555556666666655554333 22334555666666666555555555555556
Q ss_pred CCeeecCCCCCCCC----ChhhhcCCCCCCEEEeeCccccCCCCc----cccCCCCCCEEeCCCCCCCCCCcccccCC--
Q 004413 120 LDSLRISDIYNVSS----SLDFVMSLKNLTDLSLRNALITGSIPS----GIGELQNLQTLDLSFNNLTGQIPRTLFNI-- 189 (755)
Q Consensus 120 L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-- 189 (755)
|++|++++|.+... ....+..+++|++|+|++|.++ .++. .+..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 66666655554321 0112245555666666666554 1121 13445566666666666655445444444
Q ss_pred -CCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCC-CCcccccccccccccccccc
Q 004413 190 -GSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSG-PFPSWVTSNLQMNLVANNFT 246 (755)
Q Consensus 190 -~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g-~ip~~~~~~~~l~l~~n~~~ 246 (755)
++|+.|+|++|+|+ .+|....++|+.|||++|+|++ .++..+.....|++++|+++
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTS
T ss_pred cCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCCchhhhCCCccEEECcCCCCC
Confidence 45666666666665 3444444556666666666654 23322323334555555554
No 68
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.88 E-value=1.3e-23 Score=223.05 Aligned_cols=233 Identities=15% Similarity=0.092 Sum_probs=190.2
Q ss_pred EEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCC
Q 004413 3 LSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPF 82 (755)
Q Consensus 3 L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 82 (755)
++++.+.+...+...+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+ +..+++|++|++++|.+
T Consensus 15 ~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 15 EKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp ESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 4556666654555556677899999999999998888899999999999999999976554 89999999999999998
Q ss_pred CCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccc
Q 004413 83 TGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGI 162 (755)
Q Consensus 83 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~ 162 (755)
++ ++ ..++|++|++++|.+++..+. .+++|++|++++|.+....+..+..+++|+.|+|++|.+++..+..+
T Consensus 93 ~~-l~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 93 QE-LL----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp EE-EE----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred cc-cc----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 84 32 348999999999999865433 46889999999999988777788889999999999999998777766
Q ss_pred -cCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc-cCCCCCEEEeecCcCCCCCccccc---cccc
Q 004413 163 -GELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ-KSENLQNIDLSYNHLSGPFPSWVT---SNLQ 237 (755)
Q Consensus 163 -~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~~L~~L~Ls~N~l~g~ip~~~~---~~~~ 237 (755)
..+++|+.|+|++|.+++. +. ...+++|+.|+|++|++++..+.. ..++|+.|+|++|+|+ .+|..+. ....
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred hhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 4789999999999999854 43 345899999999999999655442 2489999999999998 5676654 2335
Q ss_pred ccccccccccC
Q 004413 238 MNLVANNFTFD 248 (755)
Q Consensus 238 l~l~~n~~~~~ 248 (755)
|++++|+++++
T Consensus 242 L~l~~N~~~~~ 252 (317)
T 3o53_A 242 FDLRGNGFHCG 252 (317)
T ss_dssp EECTTCCCBHH
T ss_pred EEccCCCccCc
Confidence 88999988743
No 69
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.88 E-value=4.9e-22 Score=206.08 Aligned_cols=199 Identities=20% Similarity=0.188 Sum_probs=179.8
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
+.|++++|.+.. + +.+..+++|++|+|++|.+++ + ..+.++++|++|+|++|.+++..+..|.++++|++|++++|
T Consensus 44 ~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 119 (272)
T 3rfs_A 44 DQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119 (272)
T ss_dssp CEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred eeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCC
Confidence 478999999883 3 358999999999999999985 3 47999999999999999999888888999999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
++++..+..|.++++|++|++++|.+++..+..+..+++|+.|++++|.+....+..+..+++|+.|+|++|.+++..+.
T Consensus 120 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 199 (272)
T 3rfs_A 120 QLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG 199 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHH
Confidence 99987777899999999999999999977777789999999999999999888777889999999999999999988888
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK 210 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 210 (755)
.+..+++|+.|+|++|.+.+. +++|+.|+++.|.++|.+|...
T Consensus 200 ~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 200 VFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp TTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred HHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 899999999999999998754 5579999999999999988754
No 70
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=9.7e-22 Score=205.66 Aligned_cols=197 Identities=22% Similarity=0.205 Sum_probs=178.6
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
+.|++++|+++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+ ...+++|++|++++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N 87 (290)
T 1p9a_G 13 LEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHN 87 (290)
T ss_dssp CEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSS
T ss_pred cEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCC
Confidence 46899999998 6676665 799999999999998888899999999999999999976433 278999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
+++ .+|..+.++++|++|+|++|++++..+..|..+++|++|++++|.+.......+..+++|+.|+|++|+++...+.
T Consensus 88 ~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 166 (290)
T 1p9a_G 88 QLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAG 166 (290)
T ss_dssp CCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTT
T ss_pred cCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHH
Confidence 998 7888899999999999999999977778899999999999999999988888889999999999999999977777
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSG 204 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 204 (755)
.+..+++|+.|+|++|+++ .+|..+..+.+|+.|+|++|.+..
T Consensus 167 ~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 167 LLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp TTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred HhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 7889999999999999999 788889999999999999999874
No 71
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=3e-23 Score=233.38 Aligned_cols=222 Identities=17% Similarity=0.122 Sum_probs=186.0
Q ss_pred CchhhcCCC----CCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchh
Q 004413 14 VPRELGNLK----ELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDF 89 (755)
Q Consensus 14 ~p~~l~~l~----~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 89 (755)
+|..+..+. +|++|+|++|.+++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|.+++ ++
T Consensus 22 l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-- 96 (487)
T 3oja_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL-- 96 (487)
T ss_dssp HHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE--
T ss_pred hHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC--
Confidence 455555554 89999999999998888899999999999999999987665 8999999999999999884 33
Q ss_pred hcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCcccc-CCCCC
Q 004413 90 IGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIG-ELQNL 168 (755)
Q Consensus 90 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L 168 (755)
..++|++|++++|.+++..+. .+++|+.|++++|.+....+..+..+++|+.|+|++|.+++.+|..+. .+++|
T Consensus 97 --~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L 171 (487)
T 3oja_A 97 --VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171 (487)
T ss_dssp --ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTC
T ss_pred --CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcc
Confidence 238999999999999965543 468899999999999888788889999999999999999988888876 79999
Q ss_pred CEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc-cCCCCCEEEeecCcCCCCCccccc---ccccccccccc
Q 004413 169 QTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ-KSENLQNIDLSYNHLSGPFPSWVT---SNLQMNLVANN 244 (755)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~~L~~L~Ls~N~l~g~ip~~~~---~~~~l~l~~n~ 244 (755)
+.|+|++|.+++. + .+..+++|+.|+|++|.+++..|.. ..++|+.|+|++|.|++ +|.++. ....|++++|.
T Consensus 172 ~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~ 248 (487)
T 3oja_A 172 EHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNG 248 (487)
T ss_dssp CEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCC
T ss_pred cEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCC
Confidence 9999999999964 3 3446899999999999999765552 24899999999999995 777665 23358889888
Q ss_pred cccC
Q 004413 245 FTFD 248 (755)
Q Consensus 245 ~~~~ 248 (755)
++++
T Consensus 249 l~c~ 252 (487)
T 3oja_A 249 FHCG 252 (487)
T ss_dssp BCHH
T ss_pred CcCc
Confidence 8744
No 72
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=9.5e-22 Score=199.76 Aligned_cols=204 Identities=21% Similarity=0.205 Sum_probs=167.1
Q ss_pred CCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccC-CCCCCchhhhcCCCCCEEEccC-CCCCCCcchhh
Q 004413 13 SVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWG-AGGEIPSTYAKLRNMQTLWASD-APFTGKIPDFI 90 (755)
Q Consensus 13 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~ 90 (755)
.+|. +. ++|++|+|++|++++..+..|.++++|++|+|++|. ++...+..|.++++|++|++++ |+++...+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5666 44 489999999999987667789999999999999997 7766666899999999999998 89986666788
Q ss_pred cCCCCCcEEEccCCCCCCCCCccccCCCCCC---eeecCCC-CCCCCChhhhcCCCCCC-EEEeeCccccCCCCccccCC
Q 004413 91 GNWTKLKSLRFQGNSFQGPIPSSLSKLASLD---SLRISDI-YNVSSSLDFVMSLKNLT-DLSLRNALITGSIPSGIGEL 165 (755)
Q Consensus 91 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~---~L~l~~n-~~~~~~~~~l~~l~~L~-~L~L~~n~l~~~~p~~~~~l 165 (755)
.++++|++|++++|.+++ +|. +..+++|+ .|++++| .+.......+..+++|+ .|++++|.++ .+|......
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC
Confidence 999999999999999985 666 88888888 9999998 77777777788899999 9999999988 444443334
Q ss_pred CCCCEEeCCCCC-CCCCCcccccCC-CCCCEEEccCCcCCCCCCcccCCCCCEEEeecCc
Q 004413 166 QNLQTLDLSFNN-LTGQIPRTLFNI-GSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNH 223 (755)
Q Consensus 166 ~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~ 223 (755)
++|+.|+|++|+ +++..+..+..+ ++|+.|++++|++++ +|...+++|+.|+++++.
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSKGLEHLKELIARNTW 237 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCTTCTTCSEEECTTC-
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChhHhccCceeeccCcc
Confidence 889999999995 886556778888 899999999999984 555577889999887763
No 73
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.86 E-value=4.5e-21 Score=223.16 Aligned_cols=248 Identities=22% Similarity=0.239 Sum_probs=196.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|
T Consensus 79 ~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N 158 (635)
T 4g8a_A 79 QVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN 158 (635)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccC
Confidence 58999999999877888999999999999999998777778999999999999999998877778999999999999999
Q ss_pred CCCC-CcchhhcCCCCCcEEEccCCCCCCCCCcccc--------------------------------------------
Q 004413 81 PFTG-KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLS-------------------------------------------- 115 (755)
Q Consensus 81 ~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-------------------------------------------- 115 (755)
.++. .+|..++.+++|++|++++|++++..+..+.
T Consensus 159 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~ 238 (635)
T 4g8a_A 159 LIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSL 238 (635)
T ss_dssp CCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSH
T ss_pred ccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccc
Confidence 9875 4678888999999999998877532221110
Q ss_pred --------------------------------------------------------------------------------
Q 004413 116 -------------------------------------------------------------------------------- 115 (755)
Q Consensus 116 -------------------------------------------------------------------------------- 115 (755)
T Consensus 239 ~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 318 (635)
T 4g8a_A 239 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTI 318 (635)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEE
T ss_pred cccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccc
Confidence
Q ss_pred --------------------------------------------------CCCCCCeeecCCCCCCC-------------
Q 004413 116 --------------------------------------------------KLASLDSLRISDIYNVS------------- 132 (755)
Q Consensus 116 --------------------------------------------------~l~~L~~L~l~~n~~~~------------- 132 (755)
.+++|+.|+++.|.+..
T Consensus 319 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~ 398 (635)
T 4g8a_A 319 ERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTIS 398 (635)
T ss_dssp EECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSC
T ss_pred ccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhh
Confidence 01233333333332210
Q ss_pred -------------------------------------------------------------CChhhhcCCCCCCEEEeeC
Q 004413 133 -------------------------------------------------------------SSLDFVMSLKNLTDLSLRN 151 (755)
Q Consensus 133 -------------------------------------------------------------~~~~~l~~l~~L~~L~L~~ 151 (755)
..+..+..++.|+.|+|++
T Consensus 399 L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~ 478 (635)
T 4g8a_A 399 LKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 478 (635)
T ss_dssp CCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred hhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 0001223456677888888
Q ss_pred cccc-CCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCC
Q 004413 152 ALIT-GSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPF 228 (755)
Q Consensus 152 n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~i 228 (755)
|.+. +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+ +++|++|||++|+|++..
T Consensus 479 N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 479 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred cccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 8644 4578889999999999999999998889999999999999999999998777644 489999999999999998
Q ss_pred ccccc---ccc-cccccccccccC
Q 004413 229 PSWVT---SNL-QMNLVANNFTFD 248 (755)
Q Consensus 229 p~~~~---~~~-~l~l~~n~~~~~ 248 (755)
|..+. ..+ .|+|++|+|.|+
T Consensus 559 ~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 559 KQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp SSCTTCCCTTCCEEECTTCCBCCS
T ss_pred HHHHHhhhCcCCEEEeeCCCCccc
Confidence 98775 223 589999999987
No 74
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=3.4e-21 Score=203.44 Aligned_cols=206 Identities=22% Similarity=0.289 Sum_probs=171.8
Q ss_pred ecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCC
Q 004413 5 VAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTG 84 (755)
Q Consensus 5 Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 84 (755)
+..+.+.+.++ +..+++|++|++++|.++ .+| .+..+++|++|+|++|.+.+..+ +..+++|++|++++|.+++
T Consensus 26 l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~ 99 (308)
T 1h6u_A 26 AGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN 99 (308)
T ss_dssp TTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC
T ss_pred hCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC
Confidence 34444544332 456889999999999997 455 58899999999999999976544 8999999999999999985
Q ss_pred CcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccC
Q 004413 85 KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGE 164 (755)
Q Consensus 85 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 164 (755)
++ .+..+++|++|++++|.+++ ++. +..+++|+.|++++|.+..... +..+++|+.|+|++|.+++..+ +..
T Consensus 100 -~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~ 171 (308)
T 1h6u_A 100 -VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LAN 171 (308)
T ss_dssp -CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred -ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcC
Confidence 43 68899999999999999985 443 8999999999999998776543 8889999999999999986443 889
Q ss_pred CCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCC
Q 004413 165 LQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSG 226 (755)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g 226 (755)
+++|+.|+|++|++++. +. +..+++|+.|++++|++++..+....++|+.|++++|++++
T Consensus 172 l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 172 LSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred CCCCCEEECCCCccCcC-hh-hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeec
Confidence 99999999999999854 43 88999999999999999987765566899999999999974
No 75
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=207.05 Aligned_cols=222 Identities=18% Similarity=0.179 Sum_probs=182.9
Q ss_pred eEEecCCcCcCCCch---hhcCCCCCCEEEccCccCCCCCcccc--cCCccCcEEEccccCCCCCCc----hhhhcCCCC
Q 004413 2 LLSVAHNVFSGSVPR---ELGNLKELTVLSFGNNNFSGTLPPEI--GNLAKLEQLYLNSWGAGGEIP----STYAKLRNM 72 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~---~l~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L 72 (755)
.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|
T Consensus 68 ~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L 147 (310)
T 4glp_A 68 RLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGL 147 (310)
T ss_dssp EEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCC
T ss_pred EEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCC
Confidence 466777766532111 12345789999999999999999888 899999999999999987665 345679999
Q ss_pred CEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCC--C--CccccCCCCCCeeecCCCCCCCCChh---hhcCCCCCC
Q 004413 73 QTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGP--I--PSSLSKLASLDSLRISDIYNVSSSLD---FVMSLKNLT 145 (755)
Q Consensus 73 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~l~~l~~L~~L~l~~n~~~~~~~~---~l~~l~~L~ 145 (755)
++|+|++|.+++..+..|.++++|++|+|++|++.+. + +..+..+++|++|++++|.+...... .+..+++|+
T Consensus 148 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~ 227 (310)
T 4glp_A 148 KVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPH 227 (310)
T ss_dssp CEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCS
T ss_pred CEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCC
Confidence 9999999999988889999999999999999998642 2 23357899999999999988643221 357889999
Q ss_pred EEEeeCccccCCCCccccCC---CCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecC
Q 004413 146 DLSLRNALITGSIPSGIGEL---QNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYN 222 (755)
Q Consensus 146 ~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N 222 (755)
+|+|++|.+++..|..+..+ ++|+.|+|++|+++ .+|..+. ++|+.|+|++|++++......+++|+.|+|++|
T Consensus 228 ~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N 304 (310)
T 4glp_A 228 SLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGN 304 (310)
T ss_dssp SEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCCSCEECSST
T ss_pred EEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCccEEECcCC
Confidence 99999999998888888777 69999999999999 6787774 899999999999997533345589999999999
Q ss_pred cCCC
Q 004413 223 HLSG 226 (755)
Q Consensus 223 ~l~g 226 (755)
+|+.
T Consensus 305 ~l~~ 308 (310)
T 4glp_A 305 PFLV 308 (310)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 9974
No 76
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=1.5e-20 Score=192.53 Aligned_cols=181 Identities=21% Similarity=0.220 Sum_probs=146.3
Q ss_pred CCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEc
Q 004413 22 KELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRF 101 (755)
Q Consensus 22 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 101 (755)
...+.++++++.++ .+|..+. ++|+.|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35667788888776 5665554 57788888888887777777788888888888888888777777788888888888
Q ss_pred cCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCC
Q 004413 102 QGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQ 181 (755)
Q Consensus 102 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 181 (755)
++|.+++..+..|..+++|++|++++|.+.......+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888866666777888888888888877766666778888899999999999877777889999999999999999977
Q ss_pred CcccccCCCCCCEEEccCCcCCCC
Q 004413 182 IPRTLFNIGSLNYLFLGNNSLSGT 205 (755)
Q Consensus 182 ~p~~l~~l~~L~~L~Ls~N~l~~~ 205 (755)
.+..+..+++|+.|+|++|.+...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 777888999999999999999865
No 77
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=9e-23 Score=218.41 Aligned_cols=243 Identities=15% Similarity=0.143 Sum_probs=190.0
Q ss_pred CeEEecCCcCcCCCchhhcCC--CCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCC-CchhhhcCCCCCEEEc
Q 004413 1 MLLSVAHNVFSGSVPRELGNL--KELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGE-IPSTYAKLRNMQTLWA 77 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L 77 (755)
+.|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+.+. ++..+..+++|++|++
T Consensus 50 ~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 50 QTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred eeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 46889988877 5667777 8999999999999876555 66789999999999998765 7778899999999999
Q ss_pred cCCCCCCCcchhhcCCCCCcEEEccCC-CCCCC-CCccccCCCCCCeeecCCC-CCCCC-ChhhhcCCC-CCCEEEeeCc
Q 004413 78 SDAPFTGKIPDFIGNWTKLKSLRFQGN-SFQGP-IPSSLSKLASLDSLRISDI-YNVSS-SLDFVMSLK-NLTDLSLRNA 152 (755)
Q Consensus 78 ~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~l~~n-~~~~~-~~~~l~~l~-~L~~L~L~~n 152 (755)
++|.+++..+..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+... .+..+..++ +|++|+|++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 999988888888999999999999999 67752 5666888999999999998 66543 345678888 9999999999
Q ss_pred --ccc-CCCCccccCCCCCCEEeCCCCC-CCCCCcccccCCCCCCEEEccCCc-CCCCCC--cccCCCCCEEEeecCcCC
Q 004413 153 --LIT-GSIPSGIGELQNLQTLDLSFNN-LTGQIPRTLFNIGSLNYLFLGNNS-LSGTLP--TQKSENLQNIDLSYNHLS 225 (755)
Q Consensus 153 --~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p--~~~~~~L~~L~Ls~N~l~ 225 (755)
.++ +.++..+..+++|+.|+|++|. +++..+..+..+++|+.|++++|. +..... ....++|+.|++++| ++
T Consensus 206 ~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~ 284 (336)
T 2ast_B 206 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP 284 (336)
T ss_dssp GGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC
T ss_pred cccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC
Confidence 454 3466677889999999999999 777778888999999999999995 332111 123589999999998 44
Q ss_pred CCCcccccc-cccccccccccccC
Q 004413 226 GPFPSWVTS-NLQMNLVANNFTFD 248 (755)
Q Consensus 226 g~ip~~~~~-~~~l~l~~n~~~~~ 248 (755)
...-..+.. ...|+++.|+++..
T Consensus 285 ~~~~~~l~~~l~~L~l~~n~l~~~ 308 (336)
T 2ast_B 285 DGTLQLLKEALPHLQINCSHFTTI 308 (336)
T ss_dssp TTCHHHHHHHSTTSEESCCCSCCT
T ss_pred HHHHHHHHhhCcceEEecccCccc
Confidence 322222222 34578888887744
No 78
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.85 E-value=3.8e-20 Score=206.00 Aligned_cols=204 Identities=21% Similarity=0.241 Sum_probs=118.2
Q ss_pred CCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEc
Q 004413 22 KELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRF 101 (755)
Q Consensus 22 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 101 (755)
++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 467777777777764 55 47777777777777777654 44322 466777777776664 44 4666666666666
Q ss_pred cCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCC
Q 004413 102 QGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQ 181 (755)
Q Consensus 102 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 181 (755)
++|.+++ +|... ++|+.|++++|.+.... .+..+++|+.|++++|.+++ +|.. +++|+.|++++|++++
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~~lp--~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~- 271 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILEELP--ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD- 271 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCCccc--ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-
Confidence 6666663 33322 35666666666554222 35556666666666666553 3321 2455555555555543
Q ss_pred Ccccc-----------------cCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCcccccccccccccccc
Q 004413 182 IPRTL-----------------FNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVTSNLQMNLVANN 244 (755)
Q Consensus 182 ~p~~l-----------------~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~~~l~l~~n~ 244 (755)
+|..+ ...++|+.|++++|++++. + ...++|+.|++++|++++ +|..+.....|++++|.
T Consensus 272 l~~~~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i-~-~~~~~L~~L~Ls~N~l~~-lp~~~~~L~~L~L~~N~ 348 (454)
T 1jl5_A 272 LPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSL-C-DLPPSLEELNVSNNKLIE-LPALPPRLERLIASFNH 348 (454)
T ss_dssp CCCCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEE-C-CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred cCcccCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcc-c-CCcCcCCEEECCCCcccc-ccccCCcCCEEECCCCc
Confidence 33211 0013444555555544431 1 122578888888888886 77765555568888888
Q ss_pred ccc
Q 004413 245 FTF 247 (755)
Q Consensus 245 ~~~ 247 (755)
++.
T Consensus 349 l~~ 351 (454)
T 1jl5_A 349 LAE 351 (454)
T ss_dssp CSC
T ss_pred ccc
Confidence 774
No 79
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=1.9e-20 Score=191.60 Aligned_cols=179 Identities=19% Similarity=0.158 Sum_probs=147.8
Q ss_pred ccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeec
Q 004413 46 AKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRI 125 (755)
Q Consensus 46 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 125 (755)
.+.++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46778888888885 4555544 67889999999988877778888899999999999998877777888899999999
Q ss_pred CCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCC
Q 004413 126 SDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGT 205 (755)
Q Consensus 126 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 205 (755)
++|.+....+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 98888877777888888999999999988877777778889999999999998866666788888999999999998866
Q ss_pred CCccc--CCCCCEEEeecCcCCCC
Q 004413 206 LPTQK--SENLQNIDLSYNHLSGP 227 (755)
Q Consensus 206 ~p~~~--~~~L~~L~Ls~N~l~g~ 227 (755)
.+..+ .++|+.|+|++|++++.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 65433 37888999999998876
No 80
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.85 E-value=2.4e-21 Score=196.85 Aligned_cols=195 Identities=14% Similarity=0.123 Sum_probs=171.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCcc-CCCCCcccccCCccCcEEEccc-cCCCCCCchhhhcCCCCCEEEcc
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNN-FSGTLPPEIGNLAKLEQLYLNS-WGAGGEIPSTYAKLRNMQTLWAS 78 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~ 78 (755)
++|+|++|++++..+..|.++++|++|+|++|. ++...+..|.++++|++|+|++ |.++...+..|..+++|++|+++
T Consensus 34 ~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~ 113 (239)
T 2xwt_C 34 QTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIF 113 (239)
T ss_dssp CEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEE
T ss_pred cEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCC
Confidence 579999999998777789999999999999997 8866667899999999999998 99987777889999999999999
Q ss_pred CCCCCCCcchhhcCCCCCc---EEEccCC-CCCCCCCccccCCCCCC-eeecCCCCCCCCChhhhcCCCCCCEEEeeCcc
Q 004413 79 DAPFTGKIPDFIGNWTKLK---SLRFQGN-SFQGPIPSSLSKLASLD-SLRISDIYNVSSSLDFVMSLKNLTDLSLRNAL 153 (755)
Q Consensus 79 ~n~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~p~~l~~l~~L~-~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 153 (755)
+|.+++ +|. |..+++|+ +|++++| .+++..+..|..+++|+ .|++++|.+.......+.. ++|+.|+|++|.
T Consensus 114 ~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~ 190 (239)
T 2xwt_C 114 NTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNK 190 (239)
T ss_dssp EECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCT
T ss_pred CCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCC
Confidence 999995 776 88899998 9999999 99876677799999999 9999999988666656655 899999999995
Q ss_pred -ccCCCCccccCC-CCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCc
Q 004413 154 -ITGSIPSGIGEL-QNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNS 201 (755)
Q Consensus 154 -l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 201 (755)
++...+..|..+ ++|+.|+|++|++++ +|.. .+++|+.|+++++.
T Consensus 191 ~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 191 YLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp TCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred CcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 987777889999 999999999999994 5544 67899999998763
No 81
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=8.8e-23 Score=223.03 Aligned_cols=236 Identities=22% Similarity=0.239 Sum_probs=176.7
Q ss_pred CCchhhcCCCCCCEEEccCccCCCCC----cccccCCccCcEEEccccCC---CCCCchhh-------hcCCCCCEEEcc
Q 004413 13 SVPRELGNLKELTVLSFGNNNFSGTL----PPEIGNLAKLEQLYLNSWGA---GGEIPSTY-------AKLRNMQTLWAS 78 (755)
Q Consensus 13 ~~p~~l~~l~~L~~L~Ls~n~l~~~~----p~~~~~l~~L~~L~L~~n~l---~~~~p~~~-------~~l~~L~~L~L~ 78 (755)
.++..+..+++|++|+|++|.++... +..|..+++|++|+|++|.+ .+.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 35566778888999999999887553 33467888999999988644 44556554 678899999999
Q ss_pred CCCCCC----CcchhhcCCCCCcEEEccCCCCCCCCCcc----ccCC---------CCCCeeecCCCCCCCCChh----h
Q 004413 79 DAPFTG----KIPDFIGNWTKLKSLRFQGNSFQGPIPSS----LSKL---------ASLDSLRISDIYNVSSSLD----F 137 (755)
Q Consensus 79 ~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~----l~~l---------~~L~~L~l~~n~~~~~~~~----~ 137 (755)
+|.++. .++..+..+++|++|+|++|.++...+.. +..+ ++|++|++++|.+.....+ .
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 998886 47778888899999999999886433333 3333 8899999998887644333 5
Q ss_pred hcCCCCCCEEEeeCccccC-----CCCccccCCCCCCEEeCCCCCCC----CCCcccccCCCCCCEEEccCCcCCCC---
Q 004413 138 VMSLKNLTDLSLRNALITG-----SIPSGIGELQNLQTLDLSFNNLT----GQIPRTLFNIGSLNYLFLGNNSLSGT--- 205 (755)
Q Consensus 138 l~~l~~L~~L~L~~n~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~l~~l~~L~~L~Ls~N~l~~~--- 205 (755)
+..+++|+.|+|++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 6678889999999998873 24447788889999999999885 46777888888999999999988764
Q ss_pred -CCcc----cCCCCCEEEeecCcCCC----CCccccc----ccccccccccccccC
Q 004413 206 -LPTQ----KSENLQNIDLSYNHLSG----PFPSWVT----SNLQMNLVANNFTFD 248 (755)
Q Consensus 206 -~p~~----~~~~L~~L~Ls~N~l~g----~ip~~~~----~~~~l~l~~n~~~~~ 248 (755)
++.. ..++|+.|+|++|.|++ .+|..+. ....|++++|+++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 3332 25789999999999987 4777662 233588888888744
No 82
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=5.5e-22 Score=214.70 Aligned_cols=246 Identities=19% Similarity=0.160 Sum_probs=195.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCc----ccccCCc-cCcEEEccccCCCCCCchhhhcC-----C
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLP----PEIGNLA-KLEQLYLNSWGAGGEIPSTYAKL-----R 70 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~ 70 (755)
.+++|+.|++++.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.+.+..+..+..+ +
T Consensus 1 ~~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 1 MNYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp CEEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred CccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 368999999999999988888889999999999997766 7788888 99999999999998888777775 9
Q ss_pred CCCEEEccCCCCCCCcchhh----cCC-CCCcEEEccCCCCCCCCCccc----cC-CCCCCeeecCCCCCCCCChh----
Q 004413 71 NMQTLWASDAPFTGKIPDFI----GNW-TKLKSLRFQGNSFQGPIPSSL----SK-LASLDSLRISDIYNVSSSLD---- 136 (755)
Q Consensus 71 ~L~~L~L~~n~l~~~~p~~~----~~l-~~L~~L~L~~n~l~~~~p~~l----~~-l~~L~~L~l~~n~~~~~~~~---- 136 (755)
+|++|+|++|.+++..+..+ ..+ ++|++|+|++|.+++..+..+ .. .++|++|++++|.+......
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 99999999999997766644 444 899999999999986665543 34 36999999999998866554
Q ss_pred hhcCCC-CCCEEEeeCccccCCCCccc----cCC-CCCCEEeCCCCCCCCC----CcccccC-CCCCCEEEccCCcCCCC
Q 004413 137 FVMSLK-NLTDLSLRNALITGSIPSGI----GEL-QNLQTLDLSFNNLTGQ----IPRTLFN-IGSLNYLFLGNNSLSGT 205 (755)
Q Consensus 137 ~l~~l~-~L~~L~L~~n~l~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~----~p~~l~~-l~~L~~L~Ls~N~l~~~ 205 (755)
.+..++ +|++|+|++|.+++..+..+ ..+ ++|+.|+|++|.+++. ++..+.. .++|+.|+|++|.+++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 345565 99999999999997776544 445 6999999999999863 4555655 46999999999999865
Q ss_pred CCc------ccCCCCCEEEeecCcCCCCCcccc-------c---ccccccccccccc
Q 004413 206 LPT------QKSENLQNIDLSYNHLSGPFPSWV-------T---SNLQMNLVANNFT 246 (755)
Q Consensus 206 ~p~------~~~~~L~~L~Ls~N~l~g~ip~~~-------~---~~~~l~l~~n~~~ 246 (755)
.+. ...++|+.|+|++|.+++..+..+ . ....|++++|++.
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 442 234789999999999765443321 1 1234788888765
No 83
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=3.2e-20 Score=196.01 Aligned_cols=188 Identities=23% Similarity=0.300 Sum_probs=164.7
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|++++|++.. +| .+..+++|++|+|++|.+++ ++. +..+++|++|+|++|.+.+. + .+..+++|++|++++|
T Consensus 44 ~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n 117 (308)
T 1h6u_A 44 TTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTST 117 (308)
T ss_dssp CEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTS
T ss_pred CEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCC
Confidence 579999999985 45 68999999999999999985 444 99999999999999999764 3 6899999999999999
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCc
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPS 160 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 160 (755)
.+++ ++. +..+++|++|++++|.+++..+ +..+++|+.|++++|.+..... +..+++|+.|++++|.+++..+
T Consensus 118 ~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~- 190 (308)
T 1h6u_A 118 QITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP- 190 (308)
T ss_dssp CCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-
T ss_pred CCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-
Confidence 9996 443 8999999999999999985433 8899999999999998876443 8899999999999999986544
Q ss_pred cccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 004413 161 GIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSG 204 (755)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 204 (755)
+..+++|+.|+|++|++++.. .+..+++|+.|++++|++++
T Consensus 191 -l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 191 -LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred -hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 889999999999999999644 38899999999999999984
No 84
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.84 E-value=1.3e-19 Score=208.20 Aligned_cols=218 Identities=24% Similarity=0.301 Sum_probs=139.3
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|++++|+|+ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+++. +|. .+++|++|+|++|
T Consensus 43 ~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 43 AVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSC
T ss_pred cEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCC
Confidence 36788888887 6676665 68888888888887 4555 46788888888888764 444 5677888888887
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCCh--hhh--------------cCCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSL--DFV--------------MSLKNL 144 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~--~~l--------------~~l~~L 144 (755)
++++ +|. .+++|+.|++++|+++. +|.. +++|++|++++|.+..... ..+ ..+++|
T Consensus 112 ~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L 183 (622)
T 3g06_A 112 PLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGL 183 (622)
T ss_dssp CCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTC
T ss_pred cCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCC
Confidence 7774 443 45667777777777663 4442 3566666666665543211 011 123556
Q ss_pred CEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcC
Q 004413 145 TDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHL 224 (755)
Q Consensus 145 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l 224 (755)
+.|+|++|.+++ +|.. +++|+.|++++|.++ .+|. .+++|+.|++++|.|++ +| ...++|+.|+|++|.|
T Consensus 184 ~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~---~~~~L~~L~Ls~N~L~~-lp-~~l~~L~~L~Ls~N~L 253 (622)
T 3g06_A 184 QELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPA---LPSGLKELIVSGNRLTS-LP-VLPSELKELMVSGNRL 253 (622)
T ss_dssp CEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCC---CCTTCCEEECCSSCCSC-CC-CCCTTCCEEECCSSCC
T ss_pred cEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCC---CCCCCCEEEccCCccCc-CC-CCCCcCcEEECCCCCC
Confidence 666666666653 3322 355666666666665 3332 23678888888888875 44 4457788888888888
Q ss_pred CCCCcccccccccccccccccccC
Q 004413 225 SGPFPSWVTSNLQMNLVANNFTFD 248 (755)
Q Consensus 225 ~g~ip~~~~~~~~l~l~~n~~~~~ 248 (755)
+ .+|..+.....|+|++|+++..
T Consensus 254 ~-~lp~~~~~L~~L~Ls~N~L~~l 276 (622)
T 3g06_A 254 T-SLPMLPSGLLSLSVYRNQLTRL 276 (622)
T ss_dssp S-CCCCCCTTCCEEECCSSCCCSC
T ss_pred C-cCCcccccCcEEeCCCCCCCcC
Confidence 7 5666443444678888877733
No 85
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=1.8e-22 Score=220.58 Aligned_cols=229 Identities=16% Similarity=0.174 Sum_probs=188.8
Q ss_pred CeEEecCCcCcCCCc----hhhcCCCCCCEEEccCcc---CCCCCcccc-------cCCccCcEEEccccCCCC----CC
Q 004413 1 MLLSVAHNVFSGSVP----RELGNLKELTVLSFGNNN---FSGTLPPEI-------GNLAKLEQLYLNSWGAGG----EI 62 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p----~~l~~l~~L~~L~Ls~n~---l~~~~p~~~-------~~l~~L~~L~L~~n~l~~----~~ 62 (755)
++|+|++|.|+...+ ..|.++++|++|+|++|. +++.+|..+ ..+++|++|+|++|.+.. .+
T Consensus 35 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l 114 (386)
T 2ca6_A 35 KEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPL 114 (386)
T ss_dssp CEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHH
T ss_pred cEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHH
Confidence 579999999997744 447789999999999974 445566655 789999999999999987 46
Q ss_pred chhhhcCCCCCEEEccCCCCCCCcchh----hcCC---------CCCcEEEccCCCCC-CCCC---ccccCCCCCCeeec
Q 004413 63 PSTYAKLRNMQTLWASDAPFTGKIPDF----IGNW---------TKLKSLRFQGNSFQ-GPIP---SSLSKLASLDSLRI 125 (755)
Q Consensus 63 p~~~~~l~~L~~L~L~~n~l~~~~p~~----~~~l---------~~L~~L~L~~n~l~-~~~p---~~l~~l~~L~~L~l 125 (755)
|..+..+++|++|+|++|.++...+.. +..+ ++|++|+|++|.++ +.++ ..+..+++|++|++
T Consensus 115 ~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 194 (386)
T 2ca6_A 115 IDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKM 194 (386)
T ss_dssp HHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEEC
Confidence 778899999999999999997543333 4444 89999999999997 3444 46778999999999
Q ss_pred CCCCCCCC----Chh-hhcCCCCCCEEEeeCcccc----CCCCccccCCCCCCEEeCCCCCCCCC----CcccccC--CC
Q 004413 126 SDIYNVSS----SLD-FVMSLKNLTDLSLRNALIT----GSIPSGIGELQNLQTLDLSFNNLTGQ----IPRTLFN--IG 190 (755)
Q Consensus 126 ~~n~~~~~----~~~-~l~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~--l~ 190 (755)
++|.+... ..+ .+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++|.+++. ++..+.. ++
T Consensus 195 ~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~ 274 (386)
T 2ca6_A 195 VQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENI 274 (386)
T ss_dssp CSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSC
T ss_pred cCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCC
Confidence 99987632 123 6788999999999999996 56788899999999999999999865 5666643 99
Q ss_pred CCCEEEccCCcCCC----CCCccc---CCCCCEEEeecCcCCCCCc
Q 004413 191 SLNYLFLGNNSLSG----TLPTQK---SENLQNIDLSYNHLSGPFP 229 (755)
Q Consensus 191 ~L~~L~Ls~N~l~~----~~p~~~---~~~L~~L~Ls~N~l~g~ip 229 (755)
+|+.|+|++|.+++ .+|... +++|+.|+|++|++++..|
T Consensus 275 ~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 275 GLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999997 366544 5899999999999998775
No 86
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.83 E-value=1.6e-21 Score=203.96 Aligned_cols=100 Identities=14% Similarity=0.234 Sum_probs=75.3
Q ss_pred ccccchhhhhc---CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAMR---GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~~---~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
++|||||++.. +.|+.|+|||||||+||||+||+.||....... .+...+..+ ..+|.+...+.++.
T Consensus 198 ~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~------~~~~~~~~~----~~~p~~~~~~~~~~ 267 (307)
T 3omv_A 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRG----YASPDLSKLYKNCP 267 (307)
T ss_dssp TTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHTT----CCCCCSTTSCTTSC
T ss_pred CCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH------HHHHHHhcC----CCCCCcccccccch
Confidence 57999999863 569999999999999999999999997654322 122222222 23344444444556
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
..+.+++..||+.+|++||||.||++.|+....
T Consensus 268 ~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 678899999999999999999999999986543
No 87
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.83 E-value=1.2e-21 Score=209.62 Aligned_cols=231 Identities=16% Similarity=0.180 Sum_probs=184.9
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCC-CcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGT-LPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 79 (755)
++|++++|.+.+..+. +.++++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+..+++|++|++++
T Consensus 73 ~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~ 151 (336)
T 2ast_B 73 IAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 151 (336)
T ss_dssp SEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred eEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCC
Confidence 4689999999877665 66789999999999998765 778889999999999999998877888899999999999999
Q ss_pred C-CCCC-CcchhhcCCCCCcEEEccCC-CCCCC-CCccccCCC-CCCeeecCCCC--CC-CCChhhhcCCCCCCEEEeeC
Q 004413 80 A-PFTG-KIPDFIGNWTKLKSLRFQGN-SFQGP-IPSSLSKLA-SLDSLRISDIY--NV-SSSLDFVMSLKNLTDLSLRN 151 (755)
Q Consensus 80 n-~l~~-~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~-~L~~L~l~~n~--~~-~~~~~~l~~l~~L~~L~L~~ 151 (755)
| .+++ .++..+.++++|++|++++| .+++. ++..+..++ +|++|++++|. +. ...+..+..+++|+.|++++
T Consensus 152 ~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~ 231 (336)
T 2ast_B 152 CSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD 231 (336)
T ss_dssp CBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTT
T ss_pred CCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCC
Confidence 9 6775 36777888999999999999 88754 566788899 99999999984 33 22344667889999999999
Q ss_pred cc-ccCCCCccccCCCCCCEEeCCCCC-CCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCc
Q 004413 152 AL-ITGSIPSGIGELQNLQTLDLSFNN-LTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFP 229 (755)
Q Consensus 152 n~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip 229 (755)
|. +++..+..+..+++|+.|+|++|. +.......+..+++|+.|++++| ++...-......+..|++++|++++..|
T Consensus 232 ~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 232 SVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp CTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred CCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceEEecccCccccC
Confidence 98 777777788899999999999995 33333336788999999999998 4322111122457788899999999998
Q ss_pred cccc
Q 004413 230 SWVT 233 (755)
Q Consensus 230 ~~~~ 233 (755)
.++.
T Consensus 311 ~~~~ 314 (336)
T 2ast_B 311 PTIG 314 (336)
T ss_dssp SSCS
T ss_pred Cccc
Confidence 8765
No 88
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.82 E-value=1.3e-21 Score=205.23 Aligned_cols=93 Identities=25% Similarity=0.360 Sum_probs=73.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
++|||||++.++.++.|+|||||||+||||+| |+.||......+ +... +.++... ..+.++...
T Consensus 211 ~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---~~~~----i~~~~~~--------~~p~~~~~~ 275 (308)
T 4gt4_A 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VVEM----IRNRQVL--------PCPDDCPAW 275 (308)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH---HHHH----HHTTCCC--------CCCTTCCHH
T ss_pred CcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcCCCC--------CCcccchHH
Confidence 46999999999999999999999999999999 899998654332 2222 2333322 123345567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGD 676 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~ 676 (755)
+.+++..||+.+|++||||.||++.|+..
T Consensus 276 ~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 276 VYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 88999999999999999999999999853
No 89
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.82 E-value=2.3e-21 Score=205.46 Aligned_cols=96 Identities=24% Similarity=0.312 Sum_probs=74.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
++|||||++.+..++.|+|||||||+||||+| |+.|+......+ +... +.++... +.+..+...
T Consensus 224 ~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~~----i~~g~~~--------~~p~~~~~~ 288 (329)
T 4aoj_A 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE---AIDC----ITQGREL--------ERPRACPPE 288 (329)
T ss_dssp GGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH---HHHH----HHHTCCC--------CCCTTCCHH
T ss_pred ccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH---HHHH----HHcCCCC--------CCcccccHH
Confidence 46999999999999999999999999999999 899998654332 2222 2223211 112334456
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
+.+++.+||+.+|++||||.||+++|+...+.
T Consensus 289 ~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 289 VYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 78899999999999999999999999987654
No 90
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.4e-19 Score=179.59 Aligned_cols=178 Identities=19% Similarity=0.174 Sum_probs=103.1
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++.+..+..|..+++|++|+|++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 3555666655 344333 3466777777777665545556666677777777666665555556666667777776666
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCcc
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSG 161 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~ 161 (755)
+++..+..|.++++|++|++++|.+++..+..+..+++|+.|++++|.+.......+..+++|+.|+|++|.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~------ 161 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD------ 161 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC------
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee------
Confidence 66544455666666666666666666544444555666666666655555444444555555555555555443
Q ss_pred ccCCCCCCEEeCCCCCCCCCCcccccCC
Q 004413 162 IGELQNLQTLDLSFNNLTGQIPRTLFNI 189 (755)
Q Consensus 162 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 189 (755)
+.+++|+.|+++.|+++|.+|..++.+
T Consensus 162 -~~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 162 -CTCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp -CCTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred -cCCCCHHHHHHHHHhCCceeeccCccc
Confidence 223445555555555555555544443
No 91
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.81 E-value=2.5e-21 Score=202.33 Aligned_cols=96 Identities=24% Similarity=0.330 Sum_probs=74.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
++|||||++.++.++.|+|||||||+||||+| |+.|+......+ +.. .+..+... ..+..+...
T Consensus 194 ~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~~----~i~~~~~~--------~~p~~~~~~ 258 (299)
T 4asz_A 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIE----CITQGRVL--------QRPRTCPQE 258 (299)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHH----HHHHTCCC--------CCCTTCCHH
T ss_pred hhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHHcCCCC--------CCCccchHH
Confidence 46999999999999999999999999999999 899998654332 222 22233221 123334457
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
+.+++..||+.+|++||||.||+++|+.....
T Consensus 259 ~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 259 VYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 88899999999999999999999999986543
No 92
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.81 E-value=4e-21 Score=207.90 Aligned_cols=232 Identities=16% Similarity=0.161 Sum_probs=184.7
Q ss_pred CeEEecCCcCcCCCc----hhhcCCC-CCCEEEccCccCCCCCcccccCC-----ccCcEEEccccCCCCCCchhhh---
Q 004413 1 MLLSVAHNVFSGSVP----RELGNLK-ELTVLSFGNNNFSGTLPPEIGNL-----AKLEQLYLNSWGAGGEIPSTYA--- 67 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~Ls~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~--- 67 (755)
++|+|++|.|++..+ ..|.+++ +|++|+|++|.+++..+..|..+ ++|++|+|++|.+++..+..+.
T Consensus 25 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 104 (362)
T 3goz_A 25 TSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTL 104 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHH
T ss_pred eEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHH
Confidence 579999999998877 7888999 99999999999998878777775 9999999999999887776544
Q ss_pred -cC-CCCCEEEccCCCCCCCcchhhc----C-CCCCcEEEccCCCCCCCCC----ccccCCC-CCCeeecCCCCCCCCCh
Q 004413 68 -KL-RNMQTLWASDAPFTGKIPDFIG----N-WTKLKSLRFQGNSFQGPIP----SSLSKLA-SLDSLRISDIYNVSSSL 135 (755)
Q Consensus 68 -~l-~~L~~L~L~~n~l~~~~p~~~~----~-l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~l~~n~~~~~~~ 135 (755)
.+ ++|++|+|++|.+++..+..+. . .++|++|+|++|.++...+ ..+..++ +|++|++++|.+.....
T Consensus 105 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 105 AAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 44 8999999999999876665543 3 3699999999999985443 3445665 99999999999887776
Q ss_pred h----hhcCC-CCCCEEEeeCccccCC----CCccccC-CCCCCEEeCCCCCCCCCCc----ccccCCCCCCEEEccCCc
Q 004413 136 D----FVMSL-KNLTDLSLRNALITGS----IPSGIGE-LQNLQTLDLSFNNLTGQIP----RTLFNIGSLNYLFLGNNS 201 (755)
Q Consensus 136 ~----~l~~l-~~L~~L~L~~n~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~Ls~N~ 201 (755)
. .+..+ ++|+.|+|++|.+++. ++..+.. .++|+.|+|++|.+++..+ ..+..+++|+.|+|++|.
T Consensus 185 ~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~ 264 (362)
T 3goz_A 185 AELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDI 264 (362)
T ss_dssp HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHH
T ss_pred HHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCC
Confidence 5 34455 5999999999999864 4445555 4699999999999997554 344678999999999999
Q ss_pred CCCCCCc---------ccCCCCCEEEeecCcCCCCCcccc
Q 004413 202 LSGTLPT---------QKSENLQNIDLSYNHLSGPFPSWV 232 (755)
Q Consensus 202 l~~~~p~---------~~~~~L~~L~Ls~N~l~g~ip~~~ 232 (755)
+.+..+. ...++|+.||+++|++.+..|..+
T Consensus 265 l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 265 VKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred ccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 6543222 123679999999999987655443
No 93
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.80 E-value=6.1e-19 Score=202.56 Aligned_cols=216 Identities=25% Similarity=0.305 Sum_probs=160.4
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|+|++|+|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|.+++. |. .+++|+.|++++|
T Consensus 64 ~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N 131 (622)
T 3g06_A 64 TTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGN 131 (622)
T ss_dssp SEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSS
T ss_pred cEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCC
Confidence 46888888888 4554 5678888888888887 4565 667888888888887653 33 4566777777777
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCcc---c--------------cCCCCCCeeecCCCCCCCCChhhhcCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSS---L--------------SKLASLDSLRISDIYNVSSSLDFVMSLKN 143 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~---l--------------~~l~~L~~L~l~~n~~~~~~~~~l~~l~~ 143 (755)
+++. +|.. +++|++|+|++|.+++ +|.. + ..+++|+.|++++|.+..... .+++
T Consensus 132 ~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~----~~~~ 202 (622)
T 3g06_A 132 QLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPT----LPSE 202 (622)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC----CCTT
T ss_pred CCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCC----ccch
Confidence 7663 4442 3666777777766663 2222 2 223788899999888765332 3578
Q ss_pred CCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCc
Q 004413 144 LTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNH 223 (755)
Q Consensus 144 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~ 223 (755)
|+.|++++|.++ .+|. .+++|+.|+|++|.+++ +| ..+++|+.|+|++|.|+. +|. ..++|+.|+|++|+
T Consensus 203 L~~L~L~~N~l~-~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 203 LYKLWAYNNRLT-SLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSVYRNQ 272 (622)
T ss_dssp CCEEECCSSCCS-SCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSC
T ss_pred hhEEECcCCccc-ccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeCCCCC
Confidence 999999999998 4553 35899999999999995 66 456899999999999994 555 66899999999999
Q ss_pred CCCCCccccc--c-cccccccccccccC
Q 004413 224 LSGPFPSWVT--S-NLQMNLVANNFTFD 248 (755)
Q Consensus 224 l~g~ip~~~~--~-~~~l~l~~n~~~~~ 248 (755)
|+ .+|..+. . ...|+|++|+++..
T Consensus 273 L~-~lp~~l~~l~~L~~L~L~~N~l~~~ 299 (622)
T 3g06_A 273 LT-RLPESLIHLSSETTVNLEGNPLSER 299 (622)
T ss_dssp CC-SCCGGGGGSCTTCEEECCSCCCCHH
T ss_pred CC-cCCHHHhhccccCEEEecCCCCCCc
Confidence 99 7888776 2 33589999998743
No 94
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.80 E-value=3.8e-19 Score=191.36 Aligned_cols=223 Identities=16% Similarity=0.149 Sum_probs=172.9
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCc-hhhhcCCCCCE-EEccC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIP-STYAKLRNMQT-LWASD 79 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~-L~L~~ 79 (755)
+++-++++++ .+|..+. +++++|+|++|+|+...+..|.++++|++|+|++|.+.+.+| ..|.++++|++ +.+..
T Consensus 13 ~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 5677888888 6787663 689999999999985555679999999999999999877665 46888988876 56667
Q ss_pred CCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCC-CCCCCChhhhcCCC-CCCEEEeeCccccCC
Q 004413 80 APFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDI-YNVSSSLDFVMSLK-NLTDLSLRNALITGS 157 (755)
Q Consensus 80 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n-~~~~~~~~~l~~l~-~L~~L~L~~n~l~~~ 157 (755)
|+++...|..|.++++|++|++++|+++...+..+....++..|++.++ .+.......+..+. .++.|+|++|.++ .
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~ 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-E 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-E
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-C
Confidence 8888777788999999999999999998666666777778888888764 45445555555554 5888999999998 4
Q ss_pred CCccccCCCCCCEEeCCC-CCCCCCCc-ccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCcc
Q 004413 158 IPSGIGELQNLQTLDLSF-NNLTGQIP-RTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPS 230 (755)
Q Consensus 158 ~p~~~~~l~~L~~L~Ls~-N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~ 230 (755)
++.......+|+.|++++ |.++ .+| ..|..+++|+.|+|++|+|+ .+|...+.+|+.|.+.++.--..+|.
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~~l~~lP~ 241 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLKKLPT 241 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCTTCCCCCC
T ss_pred CChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCCCcCcCCC
Confidence 555555667899999975 5666 455 56788999999999999998 56666778888888777655456664
No 95
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=9.4e-19 Score=198.60 Aligned_cols=183 Identities=21% Similarity=0.273 Sum_probs=154.1
Q ss_pred CCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEcc
Q 004413 23 ELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQ 102 (755)
Q Consensus 23 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 102 (755)
+|+.|+|++|.+++ +|..+. ++|++|+|++|.++ .+| ..+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999986 777664 78999999999997 566 457999999999999996 777 665 99999999
Q ss_pred CCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCC
Q 004413 103 GNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQI 182 (755)
Q Consensus 103 ~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 182 (755)
+|.+++ +|. .+++|+.|++++|.+..... .+++|+.|+|++|.+++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999996 666 68999999999998876433 67899999999999996 676 65 89999999999999 67
Q ss_pred cccccCCCCC-------CEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccccc
Q 004413 183 PRTLFNIGSL-------NYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSWVT 233 (755)
Q Consensus 183 p~~l~~l~~L-------~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~~~ 233 (755)
|. +.. +| +.|+|++|+|+ .+|... .++|+.|+|++|+|++.+|..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 76 554 77 99999999999 466543 48999999999999999988776
No 96
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=1.1e-18 Score=198.18 Aligned_cols=175 Identities=21% Similarity=0.228 Sum_probs=104.3
Q ss_pred cCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecC
Q 004413 47 KLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRIS 126 (755)
Q Consensus 47 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 126 (755)
+|+.|+|++|++++ +|..+ +++|++|+|++|+++ .+| ..+++|++|+|++|.+++ +|. +.. +|+.|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66677777666654 45433 256677777777666 455 345667777777776664 555 443 66777777
Q ss_pred CCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCC
Q 004413 127 DIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTL 206 (755)
Q Consensus 127 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 206 (755)
+|.+..... .+++|+.|+|++|.+++ +|. .+++|+.|+|++|++++ +|. +. ++|+.|+|++|.|+ .+
T Consensus 129 ~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTMLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCCCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 666655322 45666777777776664 443 45666777777777664 555 43 66777777777666 44
Q ss_pred CcccCCCC-------CEEEeecCcCCCCCcccccc---ccccccccccccc
Q 004413 207 PTQKSENL-------QNIDLSYNHLSGPFPSWVTS---NLQMNLVANNFTF 247 (755)
Q Consensus 207 p~~~~~~L-------~~L~Ls~N~l~g~ip~~~~~---~~~l~l~~n~~~~ 247 (755)
|. +..+| +.|+|++|+|+ .+|..+.. ...|+|++|++++
T Consensus 196 p~-~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 196 PA-VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CC-CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred hh-HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 44 33455 66777777766 45655441 2246666666653
No 97
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.78 E-value=2.2e-21 Score=217.05 Aligned_cols=247 Identities=18% Similarity=0.169 Sum_probs=186.8
Q ss_pred CeEEecCCcCcCCCchhhc-CCC----CCCEEEccCccCCC----CCcccccCCccCcEEEccccCCCCCCchhhh----
Q 004413 1 MLLSVAHNVFSGSVPRELG-NLK----ELTVLSFGNNNFSG----TLPPEIGNLAKLEQLYLNSWGAGGEIPSTYA---- 67 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~-~l~----~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~---- 67 (755)
++|+|++|.+++..+..+. .++ +|++|+|++|.++. .++..+..+++|++|+|++|.+....+..+.
T Consensus 59 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~ 138 (461)
T 1z7x_W 59 AELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLL 138 (461)
T ss_dssp CEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred CEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHh
Confidence 5799999999876554443 355 69999999999884 4588899999999999999998654444333
Q ss_pred -cCCCCCEEEccCCCCCCC----cchhhcCCCCCcEEEccCCCCCCCCCcccc-----CCCCCCeeecCCCCCCCCC---
Q 004413 68 -KLRNMQTLWASDAPFTGK----IPDFIGNWTKLKSLRFQGNSFQGPIPSSLS-----KLASLDSLRISDIYNVSSS--- 134 (755)
Q Consensus 68 -~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-----~l~~L~~L~l~~n~~~~~~--- 134 (755)
.+++|++|++++|.++.. ++..+..+++|++|++++|.++...+..+. .+++|+.|++++|.+....
T Consensus 139 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 218 (461)
T 1z7x_W 139 DPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD 218 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHH
T ss_pred cCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHH
Confidence 256899999999998863 466677789999999999998754343333 3669999999999877653
Q ss_pred -hhhhcCCCCCCEEEeeCccccCCC-----CccccCCCCCCEEeCCCCCCCCC----CcccccCCCCCCEEEccCCcCCC
Q 004413 135 -LDFVMSLKNLTDLSLRNALITGSI-----PSGIGELQNLQTLDLSFNNLTGQ----IPRTLFNIGSLNYLFLGNNSLSG 204 (755)
Q Consensus 135 -~~~l~~l~~L~~L~L~~n~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 204 (755)
+..+..+++|++|++++|.+++.. +..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 219 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 219 LCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCch
Confidence 446678899999999999887542 22334688999999999999854 67777789999999999999875
Q ss_pred CCCccc-------CCCCCEEEeecCcCCCC----Cccccc---cccccccccccccc
Q 004413 205 TLPTQK-------SENLQNIDLSYNHLSGP----FPSWVT---SNLQMNLVANNFTF 247 (755)
Q Consensus 205 ~~p~~~-------~~~L~~L~Ls~N~l~g~----ip~~~~---~~~~l~l~~n~~~~ 247 (755)
..+... .++|+.|++++|.+++. +|.++. ....|++++|.++.
T Consensus 299 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 299 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 332211 25899999999999865 454443 23358899888764
No 98
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.78 E-value=1.2e-18 Score=172.80 Aligned_cols=177 Identities=18% Similarity=0.202 Sum_probs=122.8
Q ss_pred CEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCC
Q 004413 25 TVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGN 104 (755)
Q Consensus 25 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 104 (755)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56677777766 455433 356777777777776555556667777777777777776544455666667777777766
Q ss_pred CCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcc
Q 004413 105 SFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPR 184 (755)
Q Consensus 105 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 184 (755)
.+++..+..+ ..+++|++|+|++|.+++..+..+..+++|+.|+|++|++++..+.
T Consensus 87 ~l~~~~~~~~------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 87 QLQSLPNGVF------------------------DKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp CCCCCCTTTT------------------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccCHhHh------------------------cCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 6664333333 4455566666666666655666677788888888888888865555
Q ss_pred cccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCCCccccc
Q 004413 185 TLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFPSWVT 233 (755)
Q Consensus 185 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~ 233 (755)
.+..+++|+.|++++|.+.+.. ++|+.|+++.|.++|.+|.+++
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~~~-----~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDCTC-----PGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCCCT-----TTTHHHHHHHHHCTTTBBCTTS
T ss_pred HhccCCCccEEEecCCCeecCC-----CCHHHHHHHHHhCCceeeccCc
Confidence 6778888888888888777543 4688889999999999998765
No 99
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.78 E-value=1.5e-20 Score=200.79 Aligned_cols=96 Identities=25% Similarity=0.289 Sum_probs=73.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
++|||||++.++.++.|+|||||||+||||+| |+.||......+ .+...+.+|.... .+..+..+
T Consensus 251 ~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------~~~~~i~~g~~~~--------~p~~~~~~ 316 (353)
T 4ase_A 251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMR--------APDYTTPE 316 (353)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCC--------CCTTCCHH
T ss_pred ccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH------HHHHHHHcCCCCC--------CCccCCHH
Confidence 46999999999999999999999999999999 999997644322 1223333332211 12233446
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
+.+++..||+.+|++||||.||++.|+...+
T Consensus 317 ~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 317 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 7789999999999999999999999987654
No 100
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=8.5e-19 Score=183.41 Aligned_cols=172 Identities=24% Similarity=0.294 Sum_probs=96.1
Q ss_pred cCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCe
Q 004413 43 GNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDS 122 (755)
Q Consensus 43 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 122 (755)
..+++|++|++++|.+... + .+..+++|++|++++|++++..+ +.++++|++|++++|.+++ ++ .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3445555555555554332 2 24455555555555555553222 5555555555555555542 22 2555555555
Q ss_pred eecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcC
Q 004413 123 LRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSL 202 (755)
Q Consensus 123 L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 202 (755)
|++++|.+... +.+..+++|+.|++++|.+++. ..+..+++|+.|+|++|++++..+ +..+++|+.|++++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 55555544432 3455566666666666666643 456666777777777777764333 66677777777777777
Q ss_pred CCCCCcccCCCCCEEEeecCcCCC
Q 004413 203 SGTLPTQKSENLQNIDLSYNHLSG 226 (755)
Q Consensus 203 ~~~~p~~~~~~L~~L~Ls~N~l~g 226 (755)
++.......++|+.|++++|+++.
T Consensus 191 ~~l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SDLRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CBCGGGTTCTTCSEEEEEEEEEEC
T ss_pred CCChhhccCCCCCEEECcCCcccC
Confidence 654332334677777777777764
No 101
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.78 E-value=4.7e-21 Score=214.31 Aligned_cols=248 Identities=15% Similarity=0.099 Sum_probs=191.6
Q ss_pred CeEEecCCcCcCCCchhhcC-----CCCCCEEEccCccCCCC----CcccccCCccCcEEEccccCCCCCCchhhh----
Q 004413 1 MLLSVAHNVFSGSVPRELGN-----LKELTVLSFGNNNFSGT----LPPEIGNLAKLEQLYLNSWGAGGEIPSTYA---- 67 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~-----l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~---- 67 (755)
++|+|++|.+++..+..+.. .++|++|+|++|.+++. ++..+..+++|++|+|++|.+....+..+.
T Consensus 116 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 195 (461)
T 1z7x_W 116 QELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK 195 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH
T ss_pred eEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh
Confidence 57999999998665554433 56899999999999864 356677789999999999998655444443
Q ss_pred -cCCCCCEEEccCCCCCCC----cchhhcCCCCCcEEEccCCCCCCCC-----CccccCCCCCCeeecCCCCCCCCC---
Q 004413 68 -KLRNMQTLWASDAPFTGK----IPDFIGNWTKLKSLRFQGNSFQGPI-----PSSLSKLASLDSLRISDIYNVSSS--- 134 (755)
Q Consensus 68 -~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~-----p~~l~~l~~L~~L~l~~n~~~~~~--- 134 (755)
.+++|++|++++|.++.. ++..+..+++|++|++++|.++... +..+..+++|++|++++|.+....
T Consensus 196 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 275 (461)
T 1z7x_W 196 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGD 275 (461)
T ss_dssp HSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHH
T ss_pred cCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHH
Confidence 367999999999999864 5778888999999999999987432 222346899999999999877643
Q ss_pred -hhhhcCCCCCCEEEeeCccccCCCCcccc-----CCCCCCEEeCCCCCCCCC----CcccccCCCCCCEEEccCCcCCC
Q 004413 135 -LDFVMSLKNLTDLSLRNALITGSIPSGIG-----ELQNLQTLDLSFNNLTGQ----IPRTLFNIGSLNYLFLGNNSLSG 204 (755)
Q Consensus 135 -~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 204 (755)
+..+..+++|++|+|++|.+.+..+..+. ..++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 276 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 276 LCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 34566789999999999998754333332 236999999999999865 56677788999999999999986
Q ss_pred CCCccc-------CCCCCEEEeecCcCCC----CCccccc---ccccccccccccccC
Q 004413 205 TLPTQK-------SENLQNIDLSYNHLSG----PFPSWVT---SNLQMNLVANNFTFD 248 (755)
Q Consensus 205 ~~p~~~-------~~~L~~L~Ls~N~l~g----~ip~~~~---~~~~l~l~~n~~~~~ 248 (755)
..+... .++|+.|+|++|.+++ .+|..+. ....|++++|+++..
T Consensus 356 ~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 356 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 433321 3589999999999986 7777665 334689999988743
No 102
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=2.1e-18 Score=197.87 Aligned_cols=183 Identities=23% Similarity=0.353 Sum_probs=108.4
Q ss_pred ecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCC
Q 004413 5 VAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTG 84 (755)
Q Consensus 5 Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 84 (755)
|..+.+...++ +..|++|+.|+|++|.+. .++ .|..+++|+.|+|++|.+.+..+ +..+++|+.|+|++|.+++
T Consensus 28 l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~ 101 (605)
T 1m9s_A 28 LKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD 101 (605)
T ss_dssp TTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC
Confidence 34444443332 345666666677766665 233 46666667777776666655433 6666667777776666663
Q ss_pred CcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccC
Q 004413 85 KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGE 164 (755)
Q Consensus 85 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 164 (755)
++ .+..+++|++|+|++|.+++ + ..+..+++|+.|+|++|.+... ..+..+++|+.|+|++|.+++..| +..
T Consensus 102 -l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~ 173 (605)
T 1m9s_A 102 -LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAG 173 (605)
T ss_dssp -CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTT
T ss_pred -Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hcc
Confidence 32 46666666666666666663 2 3456666666666666655543 455566666666666666664444 556
Q ss_pred CCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCC
Q 004413 165 LQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLS 203 (755)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 203 (755)
+++|+.|+|++|++++ + ..+..+++|+.|+|++|+++
T Consensus 174 l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 174 LTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CTTCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEE
T ss_pred CCCCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCc
Confidence 6666666666666653 2 24555666666666666655
No 103
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=5.6e-18 Score=177.21 Aligned_cols=184 Identities=23% Similarity=0.330 Sum_probs=155.7
Q ss_pred ecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCC
Q 004413 5 VAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTG 84 (755)
Q Consensus 5 Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 84 (755)
+..+.+.+..+ +..+++|+.|++++|.++. ++ .+..+++|++|+|++|.+++..+ +.++++|++|++++|.+++
T Consensus 31 l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 104 (291)
T 1h6t_A 31 LKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD 104 (291)
T ss_dssp TTCSCTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred hcCCCcccccc--hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC
Confidence 44455554332 4578899999999999974 44 48889999999999999977544 8999999999999999985
Q ss_pred CcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccC
Q 004413 85 KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGE 164 (755)
Q Consensus 85 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 164 (755)
++ .+..+++|++|++++|.+++. ..+..+++|+.|++++|.+... ..+..+++|+.|+|++|.+++..+ +..
T Consensus 105 -~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~ 176 (291)
T 1h6t_A 105 -LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAG 176 (291)
T ss_dssp -GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred -Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcC
Confidence 44 489999999999999999853 5688999999999999988765 678899999999999999996655 889
Q ss_pred CCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 004413 165 LQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSG 204 (755)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 204 (755)
+++|+.|+|++|.+++ ++ .+..+++|+.|++++|+++.
T Consensus 177 l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 177 LTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 9999999999999985 54 48899999999999999985
No 104
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.76 E-value=1.9e-20 Score=196.71 Aligned_cols=107 Identities=16% Similarity=0.121 Sum_probs=73.7
Q ss_pred ccccchhhhhcC------CCCccceeeeehheeehhhhCCcCCCCCchhh----H----HHHHHHHHHHhhcCccccccC
Q 004413 569 HGYLAPEYAMRG------HLTEKADVFSFGVAALEIISGRANSDNSLDME----K----IYLLEWAWNLHENNQSLGLVD 634 (755)
Q Consensus 569 ~gy~aPE~~~~~------~~t~ksDVysfGvvllElltg~~p~~~~~~~~----~----~~l~~~~~~~~~~~~~~~~~d 634 (755)
++|||||++.+. .++.|+|||||||+||||+||+.|+......+ . ....+.+..... .+.++
T Consensus 176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~r 251 (303)
T 3hmm_A 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC----EQKLR 251 (303)
T ss_dssp GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT----TSCCC
T ss_pred ccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHh----cccCC
Confidence 579999998754 57899999999999999999987753221100 0 000111222221 22344
Q ss_pred CCCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 635 PTLTE--FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 635 ~~l~~--~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
|.+.. .+.++...+.+++.+||+.+|++||||.||+++|+...+.
T Consensus 252 p~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 252 PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 55532 2346777899999999999999999999999999876543
No 105
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=2.6e-18 Score=185.61 Aligned_cols=178 Identities=21% Similarity=0.168 Sum_probs=136.4
Q ss_pred CCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhh-cCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEcc
Q 004413 24 LTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYA-KLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQ 102 (755)
Q Consensus 24 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 102 (755)
-+.++++++.++ .+|..+. ..|+.|+|++|++++..+..|. ++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 357788888776 5666554 4577888888888766666676 78888888888888876666678888888888888
Q ss_pred CCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccc---cCCCCCCEEeCCCCCCC
Q 004413 103 GNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGI---GELQNLQTLDLSFNNLT 179 (755)
Q Consensus 103 ~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~ 179 (755)
+|+++...+..|..+++|+.|+|++|.+....+..|..+++|+.|+|++|.++...+..+ ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 888876666677888888888888888777777778888888888888888885544444 56899999999999999
Q ss_pred CCCcccccCCCC--CCEEEccCCcCCC
Q 004413 180 GQIPRTLFNIGS--LNYLFLGNNSLSG 204 (755)
Q Consensus 180 ~~~p~~l~~l~~--L~~L~Ls~N~l~~ 204 (755)
+..+..+..++. |+.|+|++|.+..
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ccCHHHhhhccHhhcceEEecCCCccC
Confidence 655567777776 4889999998874
No 106
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1.5e-17 Score=166.36 Aligned_cols=153 Identities=18% Similarity=0.228 Sum_probs=110.6
Q ss_pred CEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCC
Q 004413 25 TVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGN 104 (755)
Q Consensus 25 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 104 (755)
+.++++++.++ .+|..+. ++|++|+|++|.+.+..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 4555443 56777777777776655556677777777777777777656667777777777777777
Q ss_pred CCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCC
Q 004413 105 SFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTG 180 (755)
Q Consensus 105 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 180 (755)
.++...+..|..+++|+.|+|++|.+....+..+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7775444456667777777777777776666677778888888888888887777778889999999999998864
No 107
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.74 E-value=9.3e-18 Score=180.48 Aligned_cols=219 Identities=16% Similarity=0.125 Sum_probs=171.1
Q ss_pred hcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcch-hhcCCCCC
Q 004413 18 LGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPD-FIGNWTKL 96 (755)
Q Consensus 18 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L 96 (755)
++.+. -++++.++++++ .+|..+. ++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|
T Consensus 6 ~C~C~-~~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l 81 (350)
T 4ay9_X 6 ICHCS-NRVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKL 81 (350)
T ss_dssp SSEEE-TTEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTC
T ss_pred ccEee-CCEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhh
Confidence 44443 367899999998 7887663 6899999999999866667899999999999999998876664 67889988
Q ss_pred cE-EEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeC-ccccCCCCccccCCC-CCCEEeC
Q 004413 97 KS-LRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRN-ALITGSIPSGIGELQ-NLQTLDL 173 (755)
Q Consensus 97 ~~-L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~-~L~~L~L 173 (755)
+. +.+..|+++...|..|..+++|++|++++|.+.......+....++..|++.+ +.+....+..|..+. .|+.|+|
T Consensus 82 ~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L 161 (350)
T 4ay9_X 82 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWL 161 (350)
T ss_dssp CEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEEC
T ss_pred hhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcc
Confidence 76 56677999977788999999999999999998877776677777888999976 566655555666664 6899999
Q ss_pred CCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc---CCCCCEEEeecCcCCCCCccccc-ccccccccc
Q 004413 174 SFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK---SENLQNIDLSYNHLSGPFPSWVT-SNLQMNLVA 242 (755)
Q Consensus 174 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~~L~~L~Ls~N~l~g~ip~~~~-~~~~l~l~~ 242 (755)
++|+++ .++.......+|+.|++.+|+..+.+|... .++|++|||++|+|+ .+|.... ....|.+..
T Consensus 162 ~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~ 232 (350)
T 4ay9_X 162 NKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARS 232 (350)
T ss_dssp CSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTT
T ss_pred cccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhcc
Confidence 999999 566666677889999998644444666543 379999999999998 5665433 333444333
No 108
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.74 E-value=3.9e-19 Score=188.85 Aligned_cols=112 Identities=36% Similarity=0.563 Sum_probs=97.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~ 647 (755)
.+|+|||.+.++.++.++|||||||+++||+||+.|+......+.....+|.......+.+..++++.+ ...+.+....
T Consensus 205 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (321)
T 2qkw_B 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK 284 (321)
T ss_dssp TTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHH
T ss_pred ccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHH
Confidence 359999999999999999999999999999999999976655555567788888777888888888887 4567788899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
+.+++..|++.+|++||||.||++.|+......
T Consensus 285 l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 285 FGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999876553
No 109
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=6.4e-18 Score=182.53 Aligned_cols=177 Identities=19% Similarity=0.098 Sum_probs=137.5
Q ss_pred CcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhc-CCCCCcEEEccCCCCCCCCCccccCCCCCCeeecC
Q 004413 48 LEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIG-NWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRIS 126 (755)
Q Consensus 48 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 126 (755)
-+.++++++++.. +|..+. ..++.|+|++|++++..+..|. ++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 4678888888854 565443 4588899999998876666676 88899999999999987777788889999999999
Q ss_pred CCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccc---cCCCCCCEEEccCCcCC
Q 004413 127 DIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTL---FNIGSLNYLFLGNNSLS 203 (755)
Q Consensus 127 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~ 203 (755)
+|.+.......|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..+ ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 988887777788888999999999999888788888889999999999999985333344 56888999999999988
Q ss_pred CCCCccc--CCC--CCEEEeecCcCCCC
Q 004413 204 GTLPTQK--SEN--LQNIDLSYNHLSGP 227 (755)
Q Consensus 204 ~~~p~~~--~~~--L~~L~Ls~N~l~g~ 227 (755)
+..+..+ .+. ++.|+|++|++...
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCC
Confidence 5333221 233 47789999988753
No 110
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=2e-17 Score=165.46 Aligned_cols=156 Identities=19% Similarity=0.196 Sum_probs=113.3
Q ss_pred CEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCc-hhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccC
Q 004413 25 TVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIP-STYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQG 103 (755)
Q Consensus 25 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 103 (755)
+.+++++|.++ .+|..+. ..+++|+|++|.+++..+ ..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46777777766 4555443 345677777777765543 3466777777777777777755555677777777777777
Q ss_pred CCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCc
Q 004413 104 NSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIP 183 (755)
Q Consensus 104 n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 183 (755)
|.+++..+..|..+++|++|+|++|.+....+..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+....+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 77776666667777777777777777776666677778888888888888888888889999999999999999886544
No 111
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.73 E-value=1.3e-17 Score=191.21 Aligned_cols=193 Identities=22% Similarity=0.267 Sum_probs=164.0
Q ss_pred CCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEE
Q 004413 21 LKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLR 100 (755)
Q Consensus 21 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 100 (755)
+..+..+.|..+.+.... .+..|++|+.|+|++|.+... + .+..+++|+.|+|++|.+++..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCccccc--chhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 345566677777776443 367889999999999998654 4 58999999999999999996554 89999999999
Q ss_pred ccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCC
Q 004413 101 FQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTG 180 (755)
Q Consensus 101 L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 180 (755)
|++|.+++ ++ .+..+++|+.|+|++|.+... +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 99999985 44 699999999999999988764 5688999999999999999965 678999999999999999997
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCCcccCCCCCEEEeecCcCCCC
Q 004413 181 QIPRTLFNIGSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGP 227 (755)
Q Consensus 181 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ 227 (755)
..| +..+++|+.|+|++|.|++......+++|+.|+|++|++++.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred chh--hccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 655 899999999999999999764434568999999999999853
No 112
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.73 E-value=3e-17 Score=164.22 Aligned_cols=153 Identities=19% Similarity=0.207 Sum_probs=131.3
Q ss_pred cEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCC
Q 004413 49 EQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDI 128 (755)
Q Consensus 49 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 128 (755)
+.++++++.++ .+|..+. ++|+.|++++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67888888885 4565443 68999999999998766668888999999999999998777888999999999999999
Q ss_pred CCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 004413 129 YNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSG 204 (755)
Q Consensus 129 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 204 (755)
.+.......+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 8887777778889999999999999998888889999999999999999997777778889999999999998874
No 113
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.73 E-value=2.6e-17 Score=164.63 Aligned_cols=157 Identities=17% Similarity=0.150 Sum_probs=135.1
Q ss_pred CcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcc-hhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecC
Q 004413 48 LEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRIS 126 (755)
Q Consensus 48 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 126 (755)
-+.+++++|.++. +|..+. ..+++|+|++|++++..+ ..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 4689999998864 565543 457899999999986544 458889999999999999997777789999999999999
Q ss_pred CCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCC
Q 004413 127 DIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTL 206 (755)
Q Consensus 127 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 206 (755)
+|.+....+..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+....
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99998888888999999999999999999888889999999999999999999877889999999999999999988654
Q ss_pred C
Q 004413 207 P 207 (755)
Q Consensus 207 p 207 (755)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 4
No 114
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=5e-17 Score=163.68 Aligned_cols=156 Identities=17% Similarity=0.156 Sum_probs=108.0
Q ss_pred CCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccC
Q 004413 24 LTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQG 103 (755)
Q Consensus 24 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 103 (755)
.+.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|.++++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 455666666665 4554443 6667777777777666666666677777777777776644445566677777777777
Q ss_pred CCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCc
Q 004413 104 NSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIP 183 (755)
Q Consensus 104 n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 183 (755)
|++++..+..|..+++|+.|++++|.+.. .+..+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+....+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCS-CCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCcccc-cCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 77765555556667777777777766653 33455777788888888888887767778889999999999999886543
No 115
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.72 E-value=1.8e-18 Score=184.12 Aligned_cols=109 Identities=45% Similarity=0.713 Sum_probs=92.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCc--hhhHHHHHHHHHHHhhcCccccccCCCC-CCCCHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSL--DMEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~ 645 (755)
.+|+|||.+..+.++.++|||||||+++||+||+.|++... ......+.+|+...........+++..+ ..++.++.
T Consensus 199 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 3uim_A 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV 278 (326)
T ss_dssp GGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHH
T ss_pred cCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHH
Confidence 46999999999999999999999999999999999986321 1122346778888777777888888877 46778889
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHhccc
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 677 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~ 677 (755)
..+.+++..|++.+|.+||||.||+++|++..
T Consensus 279 ~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 279 EQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 99999999999999999999999999999743
No 116
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.71 E-value=1.9e-16 Score=159.44 Aligned_cols=157 Identities=20% Similarity=0.202 Sum_probs=137.5
Q ss_pred cCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecC
Q 004413 47 KLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRIS 126 (755)
Q Consensus 47 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 126 (755)
+.+.++.+++.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 4678999888884 5565443 889999999999998888999999999999999999986666778999999999999
Q ss_pred CCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCC
Q 004413 127 DIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTL 206 (755)
Q Consensus 127 ~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 206 (755)
+|.+.......+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+....
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 99998887778899999999999999999 78888999999999999999999766677889999999999999998654
Q ss_pred C
Q 004413 207 P 207 (755)
Q Consensus 207 p 207 (755)
+
T Consensus 176 ~ 176 (229)
T 3e6j_A 176 R 176 (229)
T ss_dssp G
T ss_pred c
Confidence 4
No 117
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=7e-17 Score=158.57 Aligned_cols=152 Identities=21% Similarity=0.264 Sum_probs=75.9
Q ss_pred cCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCe
Q 004413 43 GNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDS 122 (755)
Q Consensus 43 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 122 (755)
..+++|++|++++|.+. .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556666666666654 333 4555666666666666444 2234555666666666666665444555555555555
Q ss_pred eecCCCCCCCCChhhhcCCCCCCEEEeeCcc-ccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCc
Q 004413 123 LRISDIYNVSSSLDFVMSLKNLTDLSLRNAL-ITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNS 201 (755)
Q Consensus 123 L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 201 (755)
|++++|.+....+..+..+++|+.|+|++|. ++ .++ .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 5555544444334444444444444444444 22 222 34444445555555554442 22 34444444444444444
Q ss_pred C
Q 004413 202 L 202 (755)
Q Consensus 202 l 202 (755)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 4
No 118
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=3.5e-17 Score=160.74 Aligned_cols=156 Identities=18% Similarity=0.225 Sum_probs=133.3
Q ss_pred hcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCc
Q 004413 18 LGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLK 97 (755)
Q Consensus 18 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 97 (755)
...+++|++|+|++|.++ .+| .+..+++|++|++++|.+.. +..+..+++|++|++++|.+++..+..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 467789999999999998 566 68999999999999997643 35788999999999999999987888999999999
Q ss_pred EEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCC
Q 004413 98 SLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNN 177 (755)
Q Consensus 98 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 177 (755)
+|++++|.+++..+..+..+++|+.|++++|...... +.+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 9999999999878888999999999999999833333 368899999999999999985 44 78899999999999999
Q ss_pred CCC
Q 004413 178 LTG 180 (755)
Q Consensus 178 l~~ 180 (755)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 119
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.68 E-value=6.4e-19 Score=200.90 Aligned_cols=194 Identities=16% Similarity=0.126 Sum_probs=150.7
Q ss_pred cCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccC-------------CCCCCchhhhcCCCCCEEE-ccCCCCCC
Q 004413 19 GNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWG-------------AGGEIPSTYAKLRNMQTLW-ASDAPFTG 84 (755)
Q Consensus 19 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~~~~l~~L~~L~-L~~n~l~~ 84 (755)
..+++|+.|+|++|.++ .+|..+++|++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56889999999999997 789999999999999997775 5566777888888888888 5555433
Q ss_pred Ccch------hhcC--CCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccC
Q 004413 85 KIPD------FIGN--WTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITG 156 (755)
Q Consensus 85 ~~p~------~~~~--l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 156 (755)
.++. .+.. ...|+.|+|++|.+++ +|. +..+++|+.|+|++|.+. ..+..+..+++|+.|+|++|.+++
T Consensus 424 ~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 424 DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC
Confidence 1111 1111 1258889999998885 666 888889999999888877 445678888888999999888885
Q ss_pred CCCccccCCCCCCEEeCCCCCCCCCC-cccccCCCCCCEEEccCCcCCCCCCcc-----cCCCCCEEEe
Q 004413 157 SIPSGIGELQNLQTLDLSFNNLTGQI-PRTLFNIGSLNYLFLGNNSLSGTLPTQ-----KSENLQNIDL 219 (755)
Q Consensus 157 ~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~-----~~~~L~~L~L 219 (755)
+| .++.+++|+.|+|++|++++.. |..+..+++|+.|+|++|++++.+|.. .+++|+.||+
T Consensus 501 -lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 501 -VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp -CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred -Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 56 7888888999999999888765 888888888999999988888766542 1477888764
No 120
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.68 E-value=3.7e-18 Score=180.15 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=71.5
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+.+..++.|+|||||||+|+||+||+.||......+. . ..... +. +.+.+.+......+
T Consensus 220 ~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~---~~i~~-~~------~~~~~~~~~~s~~~ 286 (336)
T 4g3f_A 220 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---C---LKIAS-EP------PPIREIPPSCAPLT 286 (336)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---H---HHHHH-SC------CGGGGSCTTSCHHH
T ss_pred ccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---H---HHHHc-CC------CCchhcCccCCHHH
Confidence 469999999999999999999999999999999999975443221 1 11111 11 11112222334467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.++...|++.||.+|||+.|+++.|......
T Consensus 287 ~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 287 AQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 7788999999999999999999988765544
No 121
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.68 E-value=8.3e-17 Score=165.63 Aligned_cols=171 Identities=21% Similarity=0.285 Sum_probs=135.8
Q ss_pred CCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEE
Q 004413 20 NLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSL 99 (755)
Q Consensus 20 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 99 (755)
++.++..+++++|.+++ ++ .+..+++|++|++++|.+.. ++ .+..+++|++|+|++|++++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 35567777888888873 33 57778888888888888864 44 67888888888888888885443 8888888888
Q ss_pred EccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCC
Q 004413 100 RFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLT 179 (755)
Q Consensus 100 ~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 179 (755)
+|++|++++ ++. +.. ++|+.|++++|.+... +.+..+++|+.|+|++|.+++. + .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888874 443 223 8888888888877664 4588889999999999999864 3 6888999999999999999
Q ss_pred CCCcccccCCCCCCEEEccCCcCCCC
Q 004413 180 GQIPRTLFNIGSLNYLFLGNNSLSGT 205 (755)
Q Consensus 180 ~~~p~~l~~l~~L~~L~Ls~N~l~~~ 205 (755)
+. ..+..+++|+.|++++|.++..
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 65 6788999999999999999854
No 122
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.67 E-value=4.1e-18 Score=180.71 Aligned_cols=88 Identities=14% Similarity=0.216 Sum_probs=65.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+.+..|+.|+||||+||+|+||+||+.||......+ + ..... .+... .+ +......+
T Consensus 189 ~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~---~~~i~-~~~~~-----~~---~~~~s~~~ 253 (350)
T 4b9d_A 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN---L---VLKII-SGSFP-----PV---SLHYSYDL 253 (350)
T ss_dssp CTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---H---HHHHH-HTCCC-----CC---CTTSCHHH
T ss_pred ccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---H---HHHHH-cCCCC-----CC---CccCCHHH
Confidence 57999999999999999999999999999999999997654322 1 22222 22211 11 11122356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.||++|||+.|+++
T Consensus 254 ~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 254 RSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 77889999999999999999975
No 123
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=6.7e-17 Score=166.33 Aligned_cols=171 Identities=21% Similarity=0.215 Sum_probs=143.8
Q ss_pred CCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCee
Q 004413 44 NLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSL 123 (755)
Q Consensus 44 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 123 (755)
++.++..+++++|.+++. + .+..+++|++|++++|.++ .++ .+..+++|++|+|++|.+++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 467788889999998654 3 6788999999999999998 455 68899999999999999995444 9999999999
Q ss_pred ecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCC
Q 004413 124 RISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLS 203 (755)
Q Consensus 124 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 203 (755)
++++|.+..... +.. ++|+.|+|++|.+++. + .+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCc
Confidence 999998876432 333 8999999999999864 3 58899999999999999995 44 6889999999999999999
Q ss_pred CCCCcccCCCCCEEEeecCcCCCC
Q 004413 204 GTLPTQKSENLQNIDLSYNHLSGP 227 (755)
Q Consensus 204 ~~~p~~~~~~L~~L~Ls~N~l~g~ 227 (755)
+.......++|+.|++++|++++.
T Consensus 164 ~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BCTTSTTCCCCCEEEEEEEEEECC
T ss_pred chHHhccCCCCCEEeCCCCcccCC
Confidence 773334558999999999999865
No 124
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.66 E-value=4.7e-17 Score=171.45 Aligned_cols=106 Identities=26% Similarity=0.449 Sum_probs=81.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhh-cCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHE-NNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+. +.++.++||||||++++||+||+.|++...... .+..+...... ...+.+.+++.+...+......
T Consensus 199 ~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (307)
T 2nru_A 199 TAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEA 275 (307)
T ss_dssp GGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS--BTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHH
T ss_pred cCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchH--HHHHHHHHhhhhhhhhhhhccccccccchHHHHH
Confidence 4699999875 568999999999999999999999987643321 12222222222 2234456677776677788889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDI 677 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~ 677 (755)
+.+++..|++.+|.+||++.+|++.|+...
T Consensus 276 l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 276 MYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 999999999999999999999999998754
No 125
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.65 E-value=2e-18 Score=196.91 Aligned_cols=189 Identities=19% Similarity=0.137 Sum_probs=158.6
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCcc-------------CCCCCcccccCCccCcEEE-ccccCCCCCCch---
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNN-------------FSGTLPPEIGNLAKLEQLY-LNSWGAGGEIPS--- 64 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-L~~n~l~~~~p~--- 64 (755)
.|+|++|+|+ .+|..|++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.. ++.
T Consensus 353 ~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~-L~~l~l 430 (567)
T 1dce_A 353 RCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD-LRSKFL 430 (567)
T ss_dssp SCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHH
T ss_pred eccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch-hhhhhh
Confidence 5789999997 789999999999999998875 5667788899999999998 56554321 111
Q ss_pred ---hhhc--CCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhc
Q 004413 65 ---TYAK--LRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVM 139 (755)
Q Consensus 65 ---~~~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~ 139 (755)
.+.. ...|+.|+|++|.+++ +|. |+++++|+.|+|++|.++ .+|..++.+++|+.|+|++|.+... +.+.
T Consensus 431 ~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l--p~l~ 505 (567)
T 1dce_A 431 LENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV--DGVA 505 (567)
T ss_dssp HHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC--GGGT
T ss_pred hcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCC--cccC
Confidence 1111 1369999999999995 776 999999999999999999 8899999999999999999998874 3899
Q ss_pred CCCCCCEEEeeCccccCCC-CccccCCCCCCEEeCCCCCCCCCCcc---cccCCCCCCEEEc
Q 004413 140 SLKNLTDLSLRNALITGSI-PSGIGELQNLQTLDLSFNNLTGQIPR---TLFNIGSLNYLFL 197 (755)
Q Consensus 140 ~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~---~l~~l~~L~~L~L 197 (755)
.+++|+.|+|++|.+++.. |..++.+++|+.|+|++|.+++..|. .+..+++|+.|++
T Consensus 506 ~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 506 NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999999999999887 99999999999999999999975442 2345899999975
No 126
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=4.8e-17 Score=191.21 Aligned_cols=213 Identities=16% Similarity=0.093 Sum_probs=115.9
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEE-----EccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEE
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVL-----SFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLW 76 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L-----~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 76 (755)
.|+|..|.+.. ++..+.....|..+ ++..|.+. ..|..|..+.+|+.|+|++|.+. .+|..+.++++|++|+
T Consensus 177 ~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~ 253 (727)
T 4b8c_D 177 KIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLY 253 (727)
T ss_dssp -----------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCB
T ss_pred eEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEE
Confidence 46777777774 34333333333332 33334443 45777888899999999999886 6677777889999999
Q ss_pred ccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccC
Q 004413 77 ASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITG 156 (755)
Q Consensus 77 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 156 (755)
|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|..|++|++|+|++|.+... +..|..+++|+.|+|++|.+++
T Consensus 254 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 254 LNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTL-PWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp CTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCC-CSSTTSCTTCCCEECTTSCCCS
T ss_pred eeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCcc-ChhhhcCCCccEEeCCCCccCC
Confidence 9999988 78888888999999999999988 7788888899999999998877644 4458888999999999999988
Q ss_pred CCCccccCCCC-CCEEeCCCCCCCCCCcccccCCCCCCEEEccCC----cCCCCCCc----cc--CCCCCEEEeecCcCC
Q 004413 157 SIPSGIGELQN-LQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNN----SLSGTLPT----QK--SENLQNIDLSYNHLS 225 (755)
Q Consensus 157 ~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N----~l~~~~p~----~~--~~~L~~L~Ls~N~l~ 225 (755)
.+|..+..+.. +..|+|++|.+++.+|.. |..|+++.| ...+.++. .. ...+....+++|-+.
T Consensus 331 ~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 331 QFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCC
T ss_pred CChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 88877755422 234788899998877764 445556655 22222222 11 234556677777775
Q ss_pred C
Q 004413 226 G 226 (755)
Q Consensus 226 g 226 (755)
+
T Consensus 405 ~ 405 (727)
T 4b8c_D 405 Q 405 (727)
T ss_dssp G
T ss_pred c
Confidence 3
No 127
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.64 E-value=6.5e-17 Score=167.68 Aligned_cols=89 Identities=16% Similarity=0.246 Sum_probs=62.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+. ++++.|+|||||||+|+||+||+.|+........ +...+..+.....++ . .....+
T Consensus 194 p~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~------~~~~i~~~~~~~~~~----~---~~~~~~ 259 (290)
T 3fpq_A 194 PEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ------IYRRVTSGVKPASFD----K---VAIPEV 259 (290)
T ss_dssp CCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH------HHHHHTTTCCCGGGG----G---CCCHHH
T ss_pred ccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH------HHHHHHcCCCCCCCC----c---cCCHHH
Confidence 6799999876 5799999999999999999999999975433221 122222221111111 1 112246
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..||+.+|++|||+.|+++
T Consensus 260 ~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 260 KEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 77889999999999999999864
No 128
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=6.8e-16 Score=150.80 Aligned_cols=130 Identities=22% Similarity=0.294 Sum_probs=68.5
Q ss_pred cEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcch-hhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCC
Q 004413 49 EQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPD-FIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISD 127 (755)
Q Consensus 49 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~ 127 (755)
++|++++|++ +.+|..+. .+|++|++++|++++..+. .|..+++|++|+|++|.+++..|..|..+++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-------- 79 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH-------- 79 (192)
T ss_dssp TEEECTTSCC-SSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTT--------
T ss_pred CEEEcCCCCc-CcCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCccc--------
Confidence 4566666665 33444332 2555666666655543332 2555555555555555555444444444444
Q ss_pred CCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCC
Q 004413 128 IYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGT 205 (755)
Q Consensus 128 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 205 (755)
|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++.
T Consensus 80 ----------------L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 80 ----------------IQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp ----------------CCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred ----------------CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 44444444445544455555555566666666666555555555555555555555555543
No 129
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.62 E-value=5.9e-17 Score=190.46 Aligned_cols=191 Identities=20% Similarity=0.136 Sum_probs=123.4
Q ss_pred CCCCEEEccCccCCCCCcccccCCccCcEEE-----ccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCC
Q 004413 22 KELTVLSFGNNNFSGTLPPEIGNLAKLEQLY-----LNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKL 96 (755)
Q Consensus 22 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~-----L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 96 (755)
++++.|+|.+|.+.. .+..+.....|..+. +..|.+. ..+..|..+++|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 678899999998874 444443333333333 3333332 45778999999999999999998 788888899999
Q ss_pred cEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCC
Q 004413 97 KSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFN 176 (755)
Q Consensus 97 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 176 (755)
++|+|++|.|+ .+|..|..|++|+.|+|++|.+. ..+..+..+++|++|+|++|.++ .+|..|+.+++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999999 89999999999999999999988 44677899999999999999998 78888999999999999999
Q ss_pred CCCCCCcccccCCCC-CCEEEccCCcCCCCCCcccCCCCCEEEeecC
Q 004413 177 NLTGQIPRTLFNIGS-LNYLFLGNNSLSGTLPTQKSENLQNIDLSYN 222 (755)
Q Consensus 177 ~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~~L~~L~Ls~N 222 (755)
.+++.+|..+..+.. +..|+|++|.+++.+|. .|..|+++.|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----~l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----ERRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----C---------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCcc----ccceeEeecc
Confidence 999988887765432 23478999999987765 5778888887
No 130
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.62 E-value=9.2e-17 Score=170.02 Aligned_cols=90 Identities=19% Similarity=0.314 Sum_probs=65.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+....|+.|+||||+||+++||+||+.||......+ +.. .+.++ ..+.+.. .......+
T Consensus 234 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~~----~i~~~-----~~~~~~~-~~~~s~~~ 300 (346)
T 4fih_A 234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---AMK----MIRDN-----LPPRLKN-LHKVSPSL 300 (346)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH----HHHHS-----SCCCCSC-GGGSCHHH
T ss_pred cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HHH----HHHcC-----CCCCCCc-cccCCHHH
Confidence 57999999999999999999999999999999999997644322 111 11111 1122211 11122356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.||++|||+.|+++
T Consensus 301 ~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 301 KGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 67889999999999999999864
No 131
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.61 E-value=2.3e-15 Score=146.95 Aligned_cols=125 Identities=20% Similarity=0.267 Sum_probs=68.3
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcc-cccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPP-EIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
+|++++|+|+ .+|..+.. +|++|+|++|.+++..+. .|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4555666553 44544432 556666666665543332 2555556666666666555555555555555666666665
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIY 129 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 129 (755)
++++..+..|.++++|++|+|++|++++..|..+..+++|++|++++|.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 137 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCC
Confidence 5555444455555555555555555555555555555555555554444
No 132
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=3.3e-15 Score=142.45 Aligned_cols=134 Identities=23% Similarity=0.193 Sum_probs=91.6
Q ss_pred CCCCCCEEEccCccCC-CCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcE
Q 004413 20 NLKELTVLSFGNNNFS-GTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKS 98 (755)
Q Consensus 20 ~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 98 (755)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3467888888888887 66777777888888888888887655 56777888888888888887667777777788888
Q ss_pred EEccCCCCCCCC-CccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCC---ccccCCCCCCEEeCC
Q 004413 99 LRFQGNSFQGPI-PSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIP---SGIGELQNLQTLDLS 174 (755)
Q Consensus 99 L~L~~n~l~~~~-p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~Ls 174 (755)
|+|++|.+++.. +..+..++ +|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~------------------------~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 155 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLE------------------------CLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGY 155 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCS------------------------CCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTE
T ss_pred EeccCCccCcchhHHHHhcCC------------------------CCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCC
Confidence 888888776421 13444444 45555555555553333 355566666666666
Q ss_pred CCCCC
Q 004413 175 FNNLT 179 (755)
Q Consensus 175 ~N~l~ 179 (755)
+|.+.
T Consensus 156 ~n~~~ 160 (168)
T 2ell_A 156 DREDQ 160 (168)
T ss_dssp ETTSC
T ss_pred CCChh
Confidence 66665
No 133
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=3e-15 Score=142.80 Aligned_cols=130 Identities=20% Similarity=0.125 Sum_probs=113.2
Q ss_pred CeEEecCCcCc-CCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 004413 1 MLLSVAHNVFS-GSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 1 ~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 79 (755)
++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|++++
T Consensus 27 ~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 104 (168)
T 2ell_A 27 RELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSG 104 (168)
T ss_dssp SEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBS
T ss_pred CEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccC
Confidence 57999999998 88898899999999999999999865 7799999999999999999988898898999999999999
Q ss_pred CCCCCCc-chhhcCCCCCcEEEccCCCCCCCCC---ccccCCCCCCeeecCCCCCCC
Q 004413 80 APFTGKI-PDFIGNWTKLKSLRFQGNSFQGPIP---SSLSKLASLDSLRISDIYNVS 132 (755)
Q Consensus 80 n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~l~~n~~~~ 132 (755)
|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|....
T Consensus 105 N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 105 NKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp SSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred CccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999642 2789999999999999999995544 367778888888777765543
No 134
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=2.1e-15 Score=140.81 Aligned_cols=128 Identities=22% Similarity=0.225 Sum_probs=86.7
Q ss_pred CCCCCEEEccCccCC-CCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEE
Q 004413 21 LKELTVLSFGNNNFS-GTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSL 99 (755)
Q Consensus 21 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 99 (755)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 56666667777777777777777654 556677777777777777776566666667777777
Q ss_pred EccCCCCCCC-CCccccCCCCCCeeecCCCCCCCCCh---hhhcCCCCCCEEEee
Q 004413 100 RFQGNSFQGP-IPSSLSKLASLDSLRISDIYNVSSSL---DFVMSLKNLTDLSLR 150 (755)
Q Consensus 100 ~L~~n~l~~~-~p~~l~~l~~L~~L~l~~n~~~~~~~---~~l~~l~~L~~L~L~ 150 (755)
++++|.+++. .+..+..+++|++|++++|.+..... ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777642 23566777777777777776665544 456677777777664
No 135
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.59 E-value=1.3e-16 Score=163.86 Aligned_cols=87 Identities=21% Similarity=0.200 Sum_probs=63.0
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
+.|||||.+.+..+ +.++||||+||+++||+||+.|++.....+ +. +.+.++.. .+.. .....
T Consensus 175 ~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~---~~----~~i~~~~~------~~p~---~~s~~ 238 (275)
T 3hyh_A 175 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LF----KNISNGVY------TLPK---FLSPG 238 (275)
T ss_dssp CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHTCC------CCCT---TSCHH
T ss_pred cccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH---HH----HHHHcCCC------CCCC---CCCHH
Confidence 57999999988776 589999999999999999999997643221 11 12222221 1111 11234
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.++...|++.||++|||+.|+++
T Consensus 239 ~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 239 AAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhHCcCHHHHHc
Confidence 567889999999999999999986
No 136
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.58 E-value=4.1e-17 Score=188.36 Aligned_cols=113 Identities=18% Similarity=0.129 Sum_probs=62.5
Q ss_pred CchhhhcCCCCCEEEccCCCCCCCcc-hhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCC----------C-C
Q 004413 62 IPSTYAKLRNMQTLWASDAPFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISD----------I-Y 129 (755)
Q Consensus 62 ~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~----------n-~ 129 (755)
+|..+..+++|++|+|++|.+++... ..+.++++|++|+++++...+.++..+..+++|++|++++ + .
T Consensus 285 l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~ 364 (592)
T 3ogk_B 285 MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGL 364 (592)
T ss_dssp GGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCC
T ss_pred HHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCc
Confidence 45556677888888888888664333 3356777788877773322222233334566677777763 2 2
Q ss_pred CCCCChh-hhcCCCCCCEEEeeCccccCCCCccccC-CCCCCEEeCC
Q 004413 130 NVSSSLD-FVMSLKNLTDLSLRNALITGSIPSGIGE-LQNLQTLDLS 174 (755)
Q Consensus 130 ~~~~~~~-~l~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls 174 (755)
+...... ....+++|++|++..|.+++..+..+.. +++|+.|+++
T Consensus 365 ~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 365 VSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp CCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred cCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 2221111 2334566666666655555444444433 5555555553
No 137
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.58 E-value=3.5e-16 Score=169.80 Aligned_cols=90 Identities=19% Similarity=0.314 Sum_probs=64.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+....|+.|+||||+||+++||+||+.||......+ +.. .+..+ ..+.+.. .......+
T Consensus 311 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~~----~i~~~-----~~~~~~~-~~~~s~~~ 377 (423)
T 4fie_A 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---AMK----MIRDN-----LPPRLKN-LHKVSPSL 377 (423)
T ss_dssp TTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH----HHHHS-----CCCCCSC-TTSSCHHH
T ss_pred cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HHH----HHHcC-----CCCCCcc-cccCCHHH
Confidence 57999999999999999999999999999999999997644322 111 11111 1122211 01112356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.||++|||+.|+++
T Consensus 378 ~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 378 KGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 67889999999999999999864
No 138
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.58 E-value=4.1e-17 Score=188.31 Aligned_cols=245 Identities=13% Similarity=0.108 Sum_probs=160.9
Q ss_pred CeEEecCCcCcCC----CchhhcCCCCCCEEEccCccCCC----CCcccccCCccCcEEEccccCCCCCCchhhhcCCCC
Q 004413 1 MLLSVAHNVFSGS----VPRELGNLKELTVLSFGNNNFSG----TLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNM 72 (755)
Q Consensus 1 ~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 72 (755)
++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+..+++|
T Consensus 167 ~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L 245 (592)
T 3ogk_B 167 KTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANL 245 (592)
T ss_dssp SEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTC
T ss_pred CEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHH
Confidence 3566666666544 33344556666666666666652 223334456667777776666543 34445555555
Q ss_pred CEEEccCCC--------------------------CCCCcchhhcCCCCCcEEEccCCCCCCCCC-ccccCCCCCCeeec
Q 004413 73 QTLWASDAP--------------------------FTGKIPDFIGNWTKLKSLRFQGNSFQGPIP-SSLSKLASLDSLRI 125 (755)
Q Consensus 73 ~~L~L~~n~--------------------------l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l 125 (755)
++|+++.+. ....+|..+..+++|++|+|++|.+++... ..+..+++|+.|++
T Consensus 246 ~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L 325 (592)
T 3ogk_B 246 EEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLET 325 (592)
T ss_dssp CEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEE
T ss_pred HhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEec
Confidence 555554211 123466777788999999999999774433 34688999999999
Q ss_pred CCCCCCCCChh-hhcCCCCCCEEEeeC-----------ccccCC-CCccccCCCCCCEEeCCCCCCCCCCcccccC-CCC
Q 004413 126 SDIYNVSSSLD-FVMSLKNLTDLSLRN-----------ALITGS-IPSGIGELQNLQTLDLSFNNLTGQIPRTLFN-IGS 191 (755)
Q Consensus 126 ~~n~~~~~~~~-~l~~l~~L~~L~L~~-----------n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~ 191 (755)
+ +.+...... .+..+++|++|+|++ |.+++. ++..+..+++|+.|+++.|.+++..+..+.. +++
T Consensus 326 ~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~ 404 (592)
T 3ogk_B 326 R-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKN 404 (592)
T ss_dssp E-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCS
T ss_pred c-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCC
Confidence 8 333333333 446789999999994 555543 2223456899999999999999877777765 999
Q ss_pred CCEEEcc----CCcCCCCCCc-------ccCCCCCEEEeecCc--CCCCCccccc----cccccccccccccc
Q 004413 192 LNYLFLG----NNSLSGTLPT-------QKSENLQNIDLSYNH--LSGPFPSWVT----SNLQMNLVANNFTF 247 (755)
Q Consensus 192 L~~L~Ls----~N~l~~~~p~-------~~~~~L~~L~Ls~N~--l~g~ip~~~~----~~~~l~l~~n~~~~ 247 (755)
|+.|+++ .|.+++.... ...++|+.|+|++|. +++..+..+. ....|+++.|.++.
T Consensus 405 L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 405 LCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp CCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred CcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 9999996 7788753211 124789999998544 7765555443 23358888888764
No 139
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=141.38 Aligned_cols=127 Identities=19% Similarity=0.218 Sum_probs=66.9
Q ss_pred CEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCC
Q 004413 25 TVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGN 104 (755)
Q Consensus 25 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 104 (755)
+++++++|.++ .+|..+. ++|++|+|++|.++ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555554 3443332 34555555555553 34445555555555555555555444445555555555555555
Q ss_pred CCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCcccc
Q 004413 105 SFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALIT 155 (755)
Q Consensus 105 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~ 155 (755)
.+++..+..|..+++|+.|+|++|.+.......+..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555444445555555555555555555444445555566666666666554
No 140
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.57 E-value=4.4e-16 Score=162.23 Aligned_cols=82 Identities=21% Similarity=0.204 Sum_probs=60.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+.+..++.++||||+||+|+||+||+.|+......+ +. .. +.++.. .+ +......+
T Consensus 190 ~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~---~~-i~~~~~------~~---p~~~s~~~ 253 (304)
T 3ubd_A 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TM---TM-ILKAKL------GM---PQFLSPEA 253 (304)
T ss_dssp GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HH-HHHCCC------CC---CTTSCHHH
T ss_pred cccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH---HH---HH-HHcCCC------CC---CCcCCHHH
Confidence 57999999999999999999999999999999999997654322 11 11 112211 11 11122346
Q ss_pred HHHHHHhcccCCCCCCCH
Q 004413 649 IGVALLCTQASPMMRPPM 666 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm 666 (755)
.++...|++.||++|||.
T Consensus 254 ~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 254 QSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp HHHHHHHTCSSGGGSTTC
T ss_pred HHHHHHHcccCHHHCCCC
Confidence 678899999999999984
No 141
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.55 E-value=1.4e-15 Score=160.19 Aligned_cols=101 Identities=14% Similarity=0.271 Sum_probs=73.4
Q ss_pred ccccchhhhh---cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAM---RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~---~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
.+|+|||.+. ...++.++|||||||+++||+||+.|+......+. +. .....+. ..+.+......+.
T Consensus 198 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--~~----~~~~~~~----~~~~~~~~~~~~~ 267 (307)
T 3lb7_A 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ--II----FMVGRGY----ASPDLSKLYKNCP 267 (307)
T ss_dssp TTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HH----HHHHHTC----CCCCSTTSCSSSC
T ss_pred cceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH--HH----HHHhcCC----CCcchhhhhcCCc
Confidence 4599999986 67789999999999999999999999976543321 11 1112221 2222222223334
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
..+.+++..|++.+|++||++.||++.|+.....
T Consensus 268 ~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 5678899999999999999999999999876554
No 142
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=5.3e-15 Score=138.00 Aligned_cols=127 Identities=21% Similarity=0.230 Sum_probs=71.3
Q ss_pred ccCcEEEccccCCC-CCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeee
Q 004413 46 AKLEQLYLNSWGAG-GEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLR 124 (755)
Q Consensus 46 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 124 (755)
++|++|++++|.+. +.+|..+..+++|++|++++|.+++. ..+.++++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45566666666655 45555555566666666666655543 4455556666666666666544555555556666666
Q ss_pred cCCCCCCCCC-hhhhcCCCCCCEEEeeCccccCCCC---ccccCCCCCCEEeCC
Q 004413 125 ISDIYNVSSS-LDFVMSLKNLTDLSLRNALITGSIP---SGIGELQNLQTLDLS 174 (755)
Q Consensus 125 l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~Ls 174 (755)
+++|.+.... +..+..+++|++|++++|.+++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6655554432 2445555666666666666554443 345555666666554
No 143
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.55 E-value=7e-16 Score=164.14 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=72.4
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||++.+..++.|+|||||||++|||+| |+.|++.....+. . ..+..+... ..+..+...+
T Consensus 184 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~----~~~~~~~~~--------~~~~~~~~~~ 248 (327)
T 3poz_A 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---S----SILEKGERL--------PQPPICTIDV 248 (327)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H----HHHHTTCCC--------CCCTTBCHHH
T ss_pred cccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH---H----HHHHcCCCC--------CCCccCCHHH
Confidence 6999999999999999999999999999999 9999976544331 1 112222111 1122234467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|.+||+|.||++.|+.....
T Consensus 249 ~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 249 YMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 8899999999999999999999999876543
No 144
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.54 E-value=1.2e-15 Score=160.87 Aligned_cols=101 Identities=20% Similarity=0.202 Sum_probs=72.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+......+. ...+. ..... .. .+......+
T Consensus 203 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~---~~~~~---~~~~~-----~~---~~~~~~~~l 268 (309)
T 3p86_A 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV---VAAVG---FKCKR-----LE---IPRNLNPQV 268 (309)
T ss_dssp CTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH---HHHHH---HSCCC-----CC---CCTTSCHHH
T ss_pred ccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHH---hcCCC-----CC---CCccCCHHH
Confidence 469999999999999999999999999999999999976543321 11111 11110 11 112223457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccCCCC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVGKVI 683 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~~~~ 683 (755)
.+++..||+.+|.+|||+.||++.|+.......+|
T Consensus 269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 78999999999999999999999999877654443
No 145
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.54 E-value=4.6e-16 Score=162.16 Aligned_cols=86 Identities=9% Similarity=0.094 Sum_probs=63.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+.+..++.++||||+||+|+||+||+.|+......+ +.. .+.++... +. ..++ ..+
T Consensus 198 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~~----~i~~~~~~--~p---~~~s----~~~ 261 (311)
T 4aw0_A 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL---IFA----KIIKLEYD--FP---EKFF----PKA 261 (311)
T ss_dssp GGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCCC--CC---TTCC----HHH
T ss_pred cccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHHcCCCC--CC---cccC----HHH
Confidence 56999999999999999999999999999999999997644322 111 12222210 11 1122 245
Q ss_pred HHHHHHhcccCCCCCCCHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVV 670 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~ 670 (755)
.++...|++.||.+|||+.|+.
T Consensus 262 ~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 262 RDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHHccCCHhHCcChHHHc
Confidence 6788999999999999999864
No 146
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.54 E-value=1.8e-15 Score=168.51 Aligned_cols=95 Identities=23% Similarity=0.355 Sum_probs=72.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+..+.++.|+|||||||+||||+| |+.|+......+ +... +..+... ..+..+...+
T Consensus 350 ~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~---~~~~----i~~~~~~--------~~~~~~~~~l 414 (454)
T 1qcf_A 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRA----LERGYRM--------PRPENCPEEL 414 (454)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHH----HHHTCCC--------CCCTTSCHHH
T ss_pred cccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcCCCC--------CCCCCCCHHH
Confidence 5999999999999999999999999999999 999997654332 2222 2222111 1122334568
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|++||||.+|+++|+.....
T Consensus 415 ~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 415 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 8899999999999999999999999986543
No 147
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.53 E-value=9.5e-16 Score=162.97 Aligned_cols=96 Identities=23% Similarity=0.292 Sum_probs=72.7
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++|||||||+++||+| |+.|+......+ +.. .+..+... ..+......+
T Consensus 219 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~----~~~~~~~~--------~~~~~~~~~l 283 (325)
T 3kul_A 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD---VIS----SVEEGYRL--------PAPMGCPHAL 283 (325)
T ss_dssp GGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---HHH----HHHTTCCC--------CCCTTCCHHH
T ss_pred cccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH---HHH----HHHcCCCC--------CCCCCcCHHH
Confidence 4999999999999999999999999999999 999987654332 111 11221110 1122234467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..||+.+|.+||+|.||+++|+......
T Consensus 284 ~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 284 HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 88999999999999999999999999876653
No 148
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.53 E-value=7.9e-16 Score=166.83 Aligned_cols=95 Identities=20% Similarity=0.285 Sum_probs=71.3
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||++....++.++|||||||++|||+| |+.|+......+ +.. .+..+... ..+..+...+
T Consensus 215 ~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~---~~~----~i~~~~~~--------~~~~~~~~~l 279 (373)
T 2qol_A 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD---VIK----AVDEGYRL--------PPPMDCPAAL 279 (373)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---HHH----HHHTTEEC--------CCCTTCBHHH
T ss_pred CccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC--------CCCccccHHH
Confidence 4999999999999999999999999999998 999987654322 221 12222110 1122334568
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|.+||+|.||+++|+.....
T Consensus 280 ~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 280 YQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 8899999999999999999999999987654
No 149
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=8.7e-14 Score=133.81 Aligned_cols=125 Identities=17% Similarity=0.220 Sum_probs=59.4
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.+++++|++. .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|++++|+
T Consensus 11 ~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 3455555554 2332222 455555555555554333444555555555555555544444444555555555555555
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCC
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIY 129 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 129 (755)
+++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 135 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 135 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCC
Confidence 554444444455555555555555543333333444444444444443
No 150
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.52 E-value=8.2e-14 Score=135.99 Aligned_cols=127 Identities=21% Similarity=0.232 Sum_probs=81.2
Q ss_pred cEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCC
Q 004413 49 EQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDI 128 (755)
Q Consensus 49 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 128 (755)
+.+++++|+++ .+|..+. ++|++|+|++|.++ .+|..|.++++|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666664 3444332 46666666666666 55566666666666666666666555556666666666666666
Q ss_pred CCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCC
Q 004413 129 YNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLT 179 (755)
Q Consensus 129 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 179 (755)
.+....+..|..+++|+.|+|++|.++...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666666666666666666666666666555555666666666666666665
No 151
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.52 E-value=3.3e-15 Score=158.51 Aligned_cols=90 Identities=16% Similarity=0.265 Sum_probs=64.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||++.+..++.++|||||||+++||+||+.|+......+ .... +... ..+.+.. .......+
T Consensus 205 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~---~~~~----~~~~-----~~~~~~~-~~~~~~~l 271 (321)
T 2c30_A 205 PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ---AMKR----LRDS-----PPPKLKN-SHKVSPVL 271 (321)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHH----HHHS-----SCCCCTT-GGGSCHHH
T ss_pred ccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHH----HhcC-----CCCCcCc-cccCCHHH
Confidence 46999999999999999999999999999999999987544322 1111 1111 1111110 11122356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++|||+.||++
T Consensus 272 ~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 272 RDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 77888999999999999999975
No 152
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.52 E-value=1.1e-15 Score=165.89 Aligned_cols=93 Identities=24% Similarity=0.282 Sum_probs=70.9
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+..+.++.|+|||||||++|||+| |+.|+......+ .. ..+..+... ..+..+...+
T Consensus 280 ~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~----~~~~~~~~~--------~~~~~~~~~l 344 (377)
T 3cbl_A 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TR----EFVEKGGRL--------PCPELCPDAV 344 (377)
T ss_dssp GGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HH----HHHHTTCCC--------CCCTTCCHHH
T ss_pred CcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCC--------CCCCCCCHHH
Confidence 4999999999999999999999999999999 999987654332 22 222222211 1122234467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDI 677 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~ 677 (755)
.+++..||+.+|++||||.+|++.|+...
T Consensus 345 ~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 345 FRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 78999999999999999999999998754
No 153
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.52 E-value=3.7e-15 Score=165.90 Aligned_cols=96 Identities=25% Similarity=0.371 Sum_probs=73.3
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+..+.++.|+|||||||++|||+| |+.|+......+ +. ..+..+... ..+..+...+
T Consensus 346 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~----~~i~~~~~~--------~~~~~~~~~l 410 (452)
T 1fmk_A 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VL----DQVERGYRM--------PCPPECPESL 410 (452)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH----HHHHTTCCC--------CCCTTSCHHH
T ss_pred cccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCC--------CCCCCCCHHH
Confidence 5999999999999999999999999999999 999987654332 11 122222111 1122334567
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..||+.+|++||||.+|++.|+......
T Consensus 411 ~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 88999999999999999999999999876543
No 154
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.51 E-value=3.2e-15 Score=167.01 Aligned_cols=101 Identities=11% Similarity=0.035 Sum_probs=73.0
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 649 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 649 (755)
+|+|||++.+..++.++|||||||+||||+||+.|+..............+...........+. ..+ ..++.
T Consensus 178 ~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~----~~~----p~~l~ 249 (483)
T 3sv0_A 178 RYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALC----RGY----PTEFA 249 (483)
T ss_dssp TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHH----TTS----CHHHH
T ss_pred cccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHh----cCC----cHHHH
Confidence 6999999999999999999999999999999999998654433222222222211111111110 111 34678
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 650 GVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 650 ~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
+++..||+.+|++||+|.+|+++|+....
T Consensus 250 ~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 250 SYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 89999999999999999999999987644
No 155
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.51 E-value=9e-15 Score=152.58 Aligned_cols=99 Identities=18% Similarity=0.337 Sum_probs=72.1
Q ss_pred ccccchhhhh---cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAM---RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~---~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
..|+|||.+. ...++.++||||||++++||+||+.|+......+ .+. .....+.. .+.+......+.
T Consensus 186 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~----~~~~~~~~----~~~~~~~~~~~~ 255 (289)
T 3og7_A 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QII----EMVGRGSL----SPDLSKVRSNCP 255 (289)
T ss_dssp CTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH--HHH----HHHHHTSC----CCCTTSSCTTSC
T ss_pred ccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH--HHH----HHhccccc----CcchhhccccCC
Confidence 4699999986 6778999999999999999999999997654322 122 22222221 222222223344
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHhccc
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 677 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~ 677 (755)
..+.+++..|++.+|.+||++.|++++|+...
T Consensus 256 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 256 KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 57888999999999999999999999998764
No 156
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.51 E-value=4e-15 Score=167.52 Aligned_cols=94 Identities=23% Similarity=0.303 Sum_probs=71.8
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+..+.++.|+|||||||+||||+| |+.|+......+ +.+ .+..+... ..+..+...+
T Consensus 384 ~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~~--------~~~~~~~~~l 448 (495)
T 1opk_A 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYRM--------ERPEGCPEKV 448 (495)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCCC--------CCCTTCCHHH
T ss_pred ceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC--------CCCCCCCHHH
Confidence 5999999999999999999999999999999 999987654332 111 22222111 1122334567
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..||+.+|++||||.+|+++|+....
T Consensus 449 ~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 449 YELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred HHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 889999999999999999999999997654
No 157
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.50 E-value=3.7e-15 Score=158.35 Aligned_cols=95 Identities=22% Similarity=0.310 Sum_probs=70.8
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+..+.++.++|||||||+++||+| |+.|+......+. . ..+..+... ..+ ..+...+
T Consensus 182 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~----~~~~~~~~~--~~~------~~~~~~~ 246 (325)
T 3kex_A 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV---P----DLLEKGERL--AQP------QICTIDV 246 (325)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH---H----HHHHTTCBC--CCC------TTBCTTT
T ss_pred cccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH---H----HHHHcCCCC--CCC------CcCcHHH
Confidence 6999999999999999999999999999999 9999876543321 1 112222111 111 1122246
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|.+||+|.||++.|+.....
T Consensus 247 ~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 247 YMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp THHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 6789999999999999999999999886554
No 158
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.50 E-value=1.5e-13 Score=132.22 Aligned_cols=133 Identities=20% Similarity=0.202 Sum_probs=86.6
Q ss_pred CCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccC
Q 004413 24 LTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQG 103 (755)
Q Consensus 24 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 103 (755)
.+.+++++|.++ .+|..+. ++|++|++++|++.+..+..|..+++|++|++++|.+++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 466777777776 4554333 5777777777777655555666777777777777777655555566677777777777
Q ss_pred CCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCc
Q 004413 104 NSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIP 183 (755)
Q Consensus 104 n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 183 (755)
|.+++..+..+. .+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+.+..+
T Consensus 86 N~l~~~~~~~~~------------------------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFD------------------------KLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTT------------------------TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhh------------------------CCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 766644443344 44555566666666665555556777888888888888876544
No 159
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.49 E-value=9.3e-15 Score=155.63 Aligned_cols=102 Identities=6% Similarity=0.019 Sum_probs=72.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+......+.......+......-.. +.+ .+ ... .+
T Consensus 181 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-~~~----~~---~~p-~~ 251 (330)
T 2izr_A 181 ARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI-EVL----CE---NFP-EM 251 (330)
T ss_dssp TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH-HHH----TT---TCH-HH
T ss_pred ccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH-HHH----hc---cCh-HH
Confidence 4699999999999999999999999999999999999765433222222222111110000 000 00 112 78
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..|++.+|.+||++.+|++.|+.....
T Consensus 252 ~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 252 ATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 8899999999999999999999999876554
No 160
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.49 E-value=4.9e-15 Score=155.07 Aligned_cols=103 Identities=8% Similarity=0.011 Sum_probs=73.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+..............+..........+. .......+
T Consensus 182 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l 253 (298)
T 1csn_A 182 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL--------CAGFPEEF 253 (298)
T ss_dssp TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH--------TTTSCHHH
T ss_pred cccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHH--------HhhCcHHH
Confidence 4599999999999999999999999999999999999764432222222222211111111100 11123467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|++||++.+|++.|+.....
T Consensus 254 ~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 254 YKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999986654
No 161
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.49 E-value=4.4e-15 Score=165.14 Aligned_cols=94 Identities=23% Similarity=0.246 Sum_probs=72.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+....++.|+|||||||++|||+| |+.|+......+. . ..+..+... ..+..+...
T Consensus 350 ~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~----~~i~~~~~~--------~~p~~~~~~ 414 (450)
T 1k9a_A 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---V----PRVEKGYKM--------DAPDGCPPA 414 (450)
T ss_dssp TTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---H----HHHHTTCCC--------CCCTTCCHH
T ss_pred cceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---H----HHHHcCCCC--------CCCCcCCHH
Confidence 46999999999999999999999999999999 9999876543321 1 122222111 112234457
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDI 677 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~ 677 (755)
+.+++..||+.+|.+||||.++++.|+...
T Consensus 415 l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 415 VYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 788999999999999999999999998754
No 162
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.49 E-value=3.8e-15 Score=158.46 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=72.1
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+.+..++.++|||||||+++||+| |+.|++.....+. .. .+..+... ..+......+
T Consensus 184 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~~----~~~~~~~~--------~~~~~~~~~l 248 (327)
T 3lzb_A 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SS----ILEKGERL--------PQPPICTIDV 248 (327)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HH----HHHTTCCC--------CCCTTBCHHH
T ss_pred cccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---HH----HHHcCCCC--------CCCccCCHHH
Confidence 5999999999999999999999999999999 9999976544331 11 12221111 1112223457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|.+||++.|+++.|+.....
T Consensus 249 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 249 YMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 7899999999999999999999999987654
No 163
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.49 E-value=1.2e-14 Score=153.14 Aligned_cols=99 Identities=24% Similarity=0.388 Sum_probs=72.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|++....... -..|. . ..+..... .... ...+
T Consensus 167 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~--~-~~~~~~~~----~~~~----~~~l 233 (307)
T 2eva_A 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIMWA--V-HNGTRPPL----IKNL----PKPI 233 (307)
T ss_dssp TTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH--HHHHH--H-HTTCCCCC----BTTC----CHHH
T ss_pred CceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH--HHHHH--H-hcCCCCCc----cccc----CHHH
Confidence 579999999999999999999999999999999999875432211 11111 1 11111111 1122 2357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..|++.+|.+||||.||++.|+......
T Consensus 234 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 234 ESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999876543
No 164
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.49 E-value=5.2e-15 Score=160.04 Aligned_cols=96 Identities=25% Similarity=0.335 Sum_probs=72.2
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++|||||||+++||+| |+.|+......+ +.+. +..+... ..+......+
T Consensus 251 ~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~---~~~~----i~~~~~~--------~~~~~~~~~l 315 (367)
T 3l9p_A 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLEF----VTSGGRM--------DPPKNCPGPV 315 (367)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHH----HHTTCCC--------CCCTTCCHHH
T ss_pred cEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcCCCC--------CCCccCCHHH
Confidence 5999999999999999999999999999998 999987654322 2221 2222111 1112223457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..||+.+|.+||++.||++.|+......
T Consensus 316 ~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 316 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 78999999999999999999999998866544
No 165
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.48 E-value=1.3e-14 Score=167.49 Aligned_cols=94 Identities=19% Similarity=0.232 Sum_probs=73.0
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||++..+.++.|+|||||||+||||+| |+.|+......+ +. ..+..+... ..+..+...+
T Consensus 504 ~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~----~~i~~~~~~--------~~p~~~~~~l 568 (613)
T 2ozo_A 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VM----AFIEQGKRM--------ECPPECPPEL 568 (613)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HH----HHHHTTCCC--------CCCTTCCHHH
T ss_pred ceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH----HHHHcCCCC--------CCCCcCCHHH
Confidence 5999999999999999999999999999998 999998655433 22 222233211 1123344578
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..||+.+|++||+|.+|+++|+....
T Consensus 569 ~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 569 YALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 889999999999999999999999987543
No 166
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.48 E-value=5.3e-15 Score=154.64 Aligned_cols=102 Identities=9% Similarity=0.009 Sum_probs=71.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHH-HHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLL-EWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+............ ......... .. +.+. ..+ ...
T Consensus 179 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~~----~~~ 249 (296)
T 4hgt_A 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI-EVLC---KGY----PSE 249 (296)
T ss_dssp GGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH-HHHT---TTS----CHH
T ss_pred ccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hh-hhhh---ccC----CHH
Confidence 4699999999999999999999999999999999998754322111111 111111110 00 0000 111 246
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
+.+++..|++.+|++||++.+|++.|+.....
T Consensus 250 l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 250 FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 78899999999999999999999999986654
No 167
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.48 E-value=1.8e-15 Score=160.60 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=72.3
Q ss_pred ccccchhhhhc-----CCCCccceeeeehheeehhhhCCcCCCCCchhhHH----------HHHHHHHHHhhcCcccccc
Q 004413 569 HGYLAPEYAMR-----GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKI----------YLLEWAWNLHENNQSLGLV 633 (755)
Q Consensus 569 ~gy~aPE~~~~-----~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~----------~l~~~~~~~~~~~~~~~~~ 633 (755)
..|+|||.+.+ ..++.|+|||||||++|||+||+.|+......... ...++...... + ..
T Consensus 197 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~ 271 (322)
T 3soc_A 197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVH-K----KK 271 (322)
T ss_dssp GGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTT-S----CC
T ss_pred ccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhc-c----cC
Confidence 46999999886 46678999999999999999999998653221100 11111111111 1 11
Q ss_pred CCCCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 634 DPTLTE--FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 634 d~~l~~--~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+.+.. ....+...+.+++..||+.+|++|||+.||++.|+....
T Consensus 272 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 272 RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 222221 123566779999999999999999999999999987654
No 168
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.48 E-value=2.4e-15 Score=157.17 Aligned_cols=86 Identities=20% Similarity=0.260 Sum_probs=58.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+.+..++.|+|||||||+|+||++ |+... .+.... . ....+... ...........
T Consensus 194 ~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--~~~~~~---~-~~~~~~~~--------p~~~~~~~~~~ 256 (299)
T 4g31_A 194 KLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRT---L-TDVRNLKF--------PPLFTQKYPCE 256 (299)
T ss_dssp CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHH---H-HHHHTTCC--------CHHHHHHCHHH
T ss_pred ccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--cHHHHH---H-HHHhcCCC--------CCCCcccCHHH
Confidence 45999999999999999999999999999997 65421 111111 1 11111111 11111222345
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+..+|++.+|.+|||+.|+++
T Consensus 257 ~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 257 YVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 67889999999999999999875
No 169
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.48 E-value=1.1e-14 Score=165.53 Aligned_cols=95 Identities=25% Similarity=0.378 Sum_probs=72.6
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+..+.++.|+|||||||+||||+| |+.|+......+ +. ..+..+... ..+..+...+
T Consensus 429 ~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~---~~----~~i~~~~~~--------~~~~~~~~~l 493 (535)
T 2h8h_A 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VL----DQVERGYRM--------PCPPECPESL 493 (535)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH---HH----HHHHTTCCC--------CCCTTCCHHH
T ss_pred cccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCC--------CCCCCCCHHH
Confidence 5999999999999999999999999999999 999987654332 11 122222111 1122334567
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|++||||.+|+++|+.....
T Consensus 494 ~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 494 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 8899999999999999999999999986554
No 170
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.48 E-value=8.2e-15 Score=158.66 Aligned_cols=95 Identities=24% Similarity=0.334 Sum_probs=72.1
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||++.+..++.++|||||||++|||+| |+.|+......+ +. ..+..+... ..+..+...+
T Consensus 270 ~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~~----~~~~~~~~~--------~~~~~~~~~l 334 (370)
T 2psq_A 270 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LF----KLLKEGHRM--------DKPANCTNEL 334 (370)
T ss_dssp GGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH----HHHHTTCCC--------CCCTTSCHHH
T ss_pred ceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHhcCCCC--------CCCCCCCHHH
Confidence 5999999999999999999999999999999 999987654332 11 122222111 1122334467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|.+||++.|+++.|+.....
T Consensus 335 ~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 335 YMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8899999999999999999999999986543
No 171
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.47 E-value=5e-15 Score=154.86 Aligned_cols=103 Identities=10% Similarity=-0.015 Sum_probs=72.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHH-HHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWA-WNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+..............+ ...... .. +.+. .. ....
T Consensus 179 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~----~~~~ 249 (296)
T 3uzp_A 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI-EVLC---KG----YPSE 249 (296)
T ss_dssp TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH-HHHT---TT----SCHH
T ss_pred cccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-ch-HHHH---hh----CCHH
Confidence 4699999999999999999999999999999999998754322111111111 111110 00 0000 11 1245
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
+.+++..|++.+|++||++.+|++.|+......
T Consensus 250 l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 250 FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 788999999999999999999999999866544
No 172
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.47 E-value=9.2e-15 Score=155.88 Aligned_cols=95 Identities=21% Similarity=0.308 Sum_probs=71.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+....++.++|||||||+++||+| |+.|+......+ +. ..+.++... ..+......+
T Consensus 215 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~---~~----~~~~~~~~~--------~~~~~~~~~l 279 (333)
T 1mqb_A 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE---VM----KAINDGFRL--------PTPMDCPSAI 279 (333)
T ss_dssp GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HH----HHHHTTCCC--------CCCTTCBHHH
T ss_pred cccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH---HH----HHHHCCCcC--------CCcccCCHHH
Confidence 4999999999999999999999999999999 999987554322 11 122222111 0112233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|.+||+|.+|++.|+.....
T Consensus 280 ~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 280 YQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 7899999999999999999999999886654
No 173
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.46 E-value=4.5e-14 Score=149.37 Aligned_cols=100 Identities=17% Similarity=0.218 Sum_probs=68.1
Q ss_pred ccccchhhhhc---------CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCC
Q 004413 569 HGYLAPEYAMR---------GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTE 639 (755)
Q Consensus 569 ~gy~aPE~~~~---------~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 639 (755)
.+|+|||.+.. ..++.++|||||||+++||+||+.|+........ .+ ....+........ .
T Consensus 198 ~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~-~~~~~~~~~~~~~---~ 267 (319)
T 2y4i_B 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI------IW-QMGTGMKPNLSQI---G 267 (319)
T ss_dssp GGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH------HH-HHHTTCCCCCCCS---S
T ss_pred ccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HH-HhccCCCCCCCcC---C
Confidence 35999999874 4589999999999999999999999876543221 11 1222211111111 1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccccCCC
Q 004413 640 FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVGKV 682 (755)
Q Consensus 640 ~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~~~ 682 (755)
+ ...+.+++..||+.+|.+|||+.+|+++|+........
T Consensus 268 ~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 268 M----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp C----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred C----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1 22477899999999999999999999999987665433
No 174
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.46 E-value=8.7e-15 Score=158.14 Aligned_cols=106 Identities=8% Similarity=0.035 Sum_probs=74.9
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 649 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 649 (755)
+|||||++.+..++.++|||||||+++||+||+.|+...... .....+....... .+.+++++.+.. ......+.
T Consensus 226 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ 300 (364)
T 3op5_A 226 EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD--PKYVRDSKIRYRE-NIASLMDKCFPA--ANAPGEIA 300 (364)
T ss_dssp TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC--HHHHHHHHHHHHH-CHHHHHHHHSCT--TCCCHHHH
T ss_pred CccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC--HHHHHHHHHHhhh-hHHHHHHHhccc--ccCHHHHH
Confidence 699999999999999999999999999999999999743221 1222222222211 122333333210 11234677
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 650 GVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 650 ~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
+++..||+.+|.+||+|.+|++.|+......
T Consensus 301 ~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 301 KYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 8899999999999999999999999876543
No 175
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.46 E-value=1e-14 Score=152.55 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=71.2
Q ss_pred ccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh---------HHHHHHHHHHHhhcCccccccCCCCCCCC
Q 004413 571 YLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME---------KIYLLEWAWNLHENNQSLGLVDPTLTEFN 641 (755)
Q Consensus 571 y~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 641 (755)
|+|||.+....++.++|||||||+++||+||+.|+....... ......++...+..+... ..+
T Consensus 183 y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 254 (295)
T 3ugc_A 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL--------PRP 254 (295)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC--------CCC
T ss_pred eeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcC--------CCC
Confidence 999999999999999999999999999999999876421110 011112222222222111 112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 642 DKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 642 ~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
..+...+.+++..||+.+|++|||+.||+++|+....
T Consensus 255 ~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 255 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 2334568889999999999999999999999987654
No 176
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=6.2e-16 Score=151.88 Aligned_cols=135 Identities=19% Similarity=0.248 Sum_probs=83.8
Q ss_pred hcCCCCCCEEEccCccCCCCCcc------cccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhc
Q 004413 18 LGNLKELTVLSFGNNNFSGTLPP------EIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIG 91 (755)
Q Consensus 18 l~~l~~L~~L~Ls~n~l~~~~p~------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 91 (755)
+.....++.++++.+.+.+.+|. .|..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44556667777777777666655 67777777777777777755 45 6677777777777777776 5666666
Q ss_pred CCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCCh-hhhcCCCCCCEEEeeCccccCC
Q 004413 92 NWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSL-DFVMSLKNLTDLSLRNALITGS 157 (755)
Q Consensus 92 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~-~~l~~l~~L~~L~L~~n~l~~~ 157 (755)
.+++|++|++++|++++ +| .+..+++|+.|++++|.+..... ..+..+++|++|++++|.+.+.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 66777777777777764 33 35555555555555555443222 3444555555555555555443
No 177
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.46 E-value=6.1e-15 Score=154.62 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=70.7
Q ss_pred ccccchhhhhcC------CCCccceeeeehheeehhhhC----------CcCCCCCchhhHHHHHHHHHHHhhcCccccc
Q 004413 569 HGYLAPEYAMRG------HLTEKADVFSFGVAALEIISG----------RANSDNSLDMEKIYLLEWAWNLHENNQSLGL 632 (755)
Q Consensus 569 ~gy~aPE~~~~~------~~t~ksDVysfGvvllElltg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 632 (755)
.+|+|||.+... .++.|+|||||||++|||+|| +.|+........ .... ....... ..
T Consensus 181 ~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~-~~~~-~~~~~~~----~~ 254 (301)
T 3q4u_A 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP-SFED-MRKVVCV----DQ 254 (301)
T ss_dssp GGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-CHHH-HHHHHTT----SC
T ss_pred cceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc-chhh-hhHHHhc----cC
Confidence 579999999876 566899999999999999999 777754322111 0111 1111111 11
Q ss_pred cCCCCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcc
Q 004413 633 VDPTLT--EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 676 (755)
Q Consensus 633 ~d~~l~--~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~ 676 (755)
..+.+. ..+......+.+++..||+.+|.+||||.||+++|+..
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 255 QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 122221 12345678899999999999999999999999999853
No 178
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.46 E-value=2.2e-14 Score=165.88 Aligned_cols=92 Identities=23% Similarity=0.247 Sum_probs=71.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||++....++.|+|||||||+++||+| |+.|+......+ +...+..+... ..+..+...+
T Consensus 537 ~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~--------~~p~~~~~~l 601 (635)
T 4fl3_A 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERM--------GCPAGCPREM 601 (635)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCC--------CCCTTCCHHH
T ss_pred eeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCC--------CCCCCCCHHH
Confidence 4999999999999999999999999999999 999997655432 22222332211 1122334578
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGD 676 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~ 676 (755)
.+++..||+.+|++||+|.+|+++|+..
T Consensus 602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 602 YDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 8899999999999999999999999864
No 179
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.46 E-value=1.3e-14 Score=152.17 Aligned_cols=105 Identities=15% Similarity=0.159 Sum_probs=67.8
Q ss_pred ccccchhhhhcC------CCCccceeeeehheeehhhhC----------CcCCCCCchhhHHHHHHHHHHHhhcCccccc
Q 004413 569 HGYLAPEYAMRG------HLTEKADVFSFGVAALEIISG----------RANSDNSLDMEKIYLLEWAWNLHENNQSLGL 632 (755)
Q Consensus 569 ~gy~aPE~~~~~------~~t~ksDVysfGvvllElltg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 632 (755)
.+|+|||.+... .++.++|||||||+++||+|| +.|+........ ...+ ....... ..
T Consensus 176 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~-~~~~-~~~~~~~----~~ 249 (303)
T 3gxj_A 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP-SVEE-MRKVVCE----QK 249 (303)
T ss_dssp GGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC-CCC--CHHHHTT----SC
T ss_pred ccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc-cHHH-HHHHHHH----hh
Confidence 679999998876 555799999999999999999 555543211100 0000 0111111 11
Q ss_pred cCCCCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 633 VDPTLTE--FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 633 ~d~~l~~--~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
..+.+.. ...++...+.+++.+||+.+|.+|||+.||+++|+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 2222211 1236677899999999999999999999999999987654
No 180
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.46 E-value=7.6e-15 Score=152.46 Aligned_cols=94 Identities=23% Similarity=0.336 Sum_probs=70.4
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+....++.++||||||++++||+| |+.|+......+ +... +..+... ..+......+
T Consensus 182 ~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~----i~~~~~~--------~~~~~~~~~l 246 (281)
T 1mp8_A 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGR----IENGERL--------PMPPNCPPTL 246 (281)
T ss_dssp GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH----HHTTCCC--------CCCTTCCHHH
T ss_pred cccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHH----HHcCCCC--------CCCCCCCHHH
Confidence 5999999999999999999999999999997 999987654432 1111 1122111 1112233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|++||++.||++.|+....
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 789999999999999999999999987543
No 181
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.45 E-value=5.1e-15 Score=156.29 Aligned_cols=85 Identities=21% Similarity=0.352 Sum_probs=60.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||++.+ .++.++|||||||++|||+||+.+...... +..+..+... +.+ +......+
T Consensus 220 ~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~~~~~~~~~----~~~---~~~~~~~l 281 (311)
T 3p1a_A 220 PRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----------WQQLRQGYLP----PEF---TAGLSSEL 281 (311)
T ss_dssp GGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HHHHTTTCCC----HHH---HTTSCHHH
T ss_pred ccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HHHHhccCCC----ccc---ccCCCHHH
Confidence 47999998775 899999999999999999999877543110 1112222111 111 11123467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++|||+.|+++
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 282 RSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHcCCChhhCcCHHHHHh
Confidence 78999999999999999999975
No 182
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.45 E-value=1.8e-14 Score=148.63 Aligned_cols=93 Identities=18% Similarity=0.300 Sum_probs=69.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++||||||++++||+||+.|+........ ...... +... . ..+......+
T Consensus 178 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~----~---~~~~~~~~~~ 243 (271)
T 3dtc_A 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV------AYGVAM-NKLA----L---PIPSTCPEPF 243 (271)
T ss_dssp GGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH------HHHHHT-SCCC----C---CCCTTCCHHH
T ss_pred cceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHhhhc-CCCC----C---CCCcccCHHH
Confidence 579999999999999999999999999999999999976543221 111111 1111 1 1122233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAG 675 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~ 675 (755)
.+++..|++.+|.+|||+.||++.|+.
T Consensus 244 ~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 244 AKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 789999999999999999999999975
No 183
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.44 E-value=9.9e-15 Score=150.47 Aligned_cols=94 Identities=29% Similarity=0.398 Sum_probs=69.7
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||+|++++||+| |+.|+......+ +.. .+..+. ....+ ......+
T Consensus 172 ~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~---~~~----~~~~~~--~~~~~------~~~~~~~ 236 (269)
T 4hcu_A 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVE----DISTGF--RLYKP------RLASTHV 236 (269)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH----HHHTTC--CCCCC------TTSCHHH
T ss_pred ccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH---HHH----HHhcCc--cCCCC------CcCCHHH
Confidence 5999999999999999999999999999999 999987654322 111 111111 01111 1123457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|++||++.|+++.|+...+
T Consensus 237 ~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 788999999999999999999999987643
No 184
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.44 E-value=1.1e-14 Score=157.60 Aligned_cols=95 Identities=22% Similarity=0.344 Sum_probs=69.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+.+..++.++|||||||++|||+| |+.|+......+ +..+ +..+.. ... +..+...+
T Consensus 261 ~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~----~~~~~~--~~~------p~~~~~~l 325 (373)
T 3c1x_A 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY----LLQGRR--LLQ------PEYCPDPL 325 (373)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHH----HHTTCC--CCC------CTTCCHHH
T ss_pred cccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHH----HHcCCC--CCC------CCCCCHHH
Confidence 5999999999999999999999999999999 566665443322 1111 112211 111 12223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|++||++.||++.|+.....
T Consensus 326 ~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 326 YEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 8899999999999999999999999986654
No 185
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=9.4e-14 Score=133.47 Aligned_cols=134 Identities=18% Similarity=0.192 Sum_probs=77.1
Q ss_pred hcCCCCCCEEEccCccCCCCCcccccCCc-cCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCC
Q 004413 18 LGNLKELTVLSFGNNNFSGTLPPEIGNLA-KLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKL 96 (755)
Q Consensus 18 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 96 (755)
+.++.+|+.|+|++|.++ .+|. +..+. +|++|+|++|.+++. ..|..+++|++|++++|.+++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455666777777777666 3343 33333 666666666666543 355666666666666666664333334566666
Q ss_pred cEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCcc----ccCCCCCCEEe
Q 004413 97 KSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSG----IGELQNLQTLD 172 (755)
Q Consensus 97 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~----~~~l~~L~~L~ 172 (755)
++|++++|.++ .+|. ...+..+++|+.|++++|.++ .+|.. +..+++|+.||
T Consensus 91 ~~L~L~~N~i~-~~~~----------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld 146 (176)
T 1a9n_A 91 TELILTNNSLV-ELGD----------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 146 (176)
T ss_dssp CEEECCSCCCC-CGGG----------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred CEEECCCCcCC-cchh----------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeC
Confidence 66666666664 3333 013444555566666666665 33432 66677777777
Q ss_pred CCCCCCC
Q 004413 173 LSFNNLT 179 (755)
Q Consensus 173 Ls~N~l~ 179 (755)
++.|.+.
T Consensus 147 ~~~n~~~ 153 (176)
T 1a9n_A 147 FQKVKLK 153 (176)
T ss_dssp TEECCHH
T ss_pred CCcCCHH
Confidence 7777654
No 186
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.44 E-value=2.1e-14 Score=149.07 Aligned_cols=94 Identities=21% Similarity=0.251 Sum_probs=70.0
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||||++++||+| |+.|+......+. ... +..+.... . +......+
T Consensus 179 ~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~---~~~----~~~~~~~~-----~---~~~~~~~l 243 (281)
T 3cc6_A 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV---IGV----LEKGDRLP-----K---PDLCPPVL 243 (281)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH---HHH----HHHTCCCC-----C---CTTCCHHH
T ss_pred ceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH---HHH----HhcCCCCC-----C---CCCCCHHH
Confidence 5999999999999999999999999999999 9999875443321 111 11111110 1 11123457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|++||++.||++.|+....
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 789999999999999999999999987543
No 187
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.44 E-value=1.4e-13 Score=146.52 Aligned_cols=100 Identities=16% Similarity=0.087 Sum_probs=76.7
Q ss_pred CCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCC-EEeCCCCCCCCCCcccccCCCCCCEE
Q 004413 117 LASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQ-TLDLSFNNLTGQIPRTLFNIGSLNYL 195 (755)
Q Consensus 117 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L 195 (755)
+++|+.|+|.+|.+......+|.++.+|+.|+|.+| ++...+..|.++.+|+ .|++.. .++...+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 678888888888888777778888888888888887 6656667788888888 888887 6665556788888888888
Q ss_pred EccCCcCCCCCCccc--CCCCCEEE
Q 004413 196 FLGNNSLSGTLPTQK--SENLQNID 218 (755)
Q Consensus 196 ~Ls~N~l~~~~p~~~--~~~L~~L~ 218 (755)
++++|.++...+..+ .++|+.|+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 888888874444333 25777765
No 188
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.44 E-value=1.2e-14 Score=149.70 Aligned_cols=94 Identities=21% Similarity=0.314 Sum_probs=69.9
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+....++.++||||||++++||+| |+.|++.....+. ... ...+. ....+. .....+
T Consensus 170 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~-~~~~~--~~~~~~------~~~~~l 234 (268)
T 3sxs_A 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------VLK-VSQGH--RLYRPH------LASDTI 234 (268)
T ss_dssp GGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHH-HHTTC--CCCCCT------TSCHHH
T ss_pred ccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH------HHH-HHcCC--CCCCCC------cChHHH
Confidence 4999999999999999999999999999999 9999876543321 111 11111 111111 112357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+|||+.||++.|+...+
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 235 YQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 789999999999999999999999987654
No 189
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.43 E-value=2.7e-14 Score=149.68 Aligned_cols=90 Identities=21% Similarity=0.307 Sum_probs=65.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+........ .......+. +.+ ..+......+
T Consensus 180 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~~------~~~-~~~~~~~~~~ 246 (297)
T 3fxz_A 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGT------PEL-QNPEKLSAIF 246 (297)
T ss_dssp GGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHCS------CCC-SCGGGSCHHH
T ss_pred cCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCC------CCC-CCccccCHHH
Confidence 469999999999999999999999999999999999976543221 111111111 011 0112223457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++|||+.|+++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhh
Confidence 78899999999999999999975
No 190
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.43 E-value=8.7e-15 Score=155.13 Aligned_cols=94 Identities=23% Similarity=0.392 Sum_probs=70.4
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+.+..++.++||||||++++||+| |+.|+......+ +. ..+..+... ..+......+
T Consensus 205 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~----~~~~~~~~~--------~~~~~~~~~l 269 (322)
T 1p4o_A 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ---VL----RFVMEGGLL--------DKPDNCPDML 269 (322)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH---HH----HHHHTTCCC--------CCCTTCCHHH
T ss_pred CccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH---HH----HHHHcCCcC--------CCCCCCCHHH
Confidence 4999999999999999999999999999999 888887543322 11 112222211 1112233457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+||++.|+++.|+....
T Consensus 270 ~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 270 FELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 789999999999999999999999987654
No 191
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.43 E-value=1.3e-14 Score=155.11 Aligned_cols=95 Identities=22% Similarity=0.346 Sum_probs=71.8
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++|||||||++|||+| |+.|+......+ +. ..+.++.... .+......+
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~----~~~~~~~~~~--------~~~~~~~~l 305 (343)
T 1luf_A 241 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE---VI----YYVRDGNILA--------CPENCPLEL 305 (343)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HH----HHHHTTCCCC--------CCTTCCHHH
T ss_pred eecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH---HH----HHHhCCCcCC--------CCCCCCHHH
Confidence 5999999999999999999999999999999 999987654322 11 2222232211 122233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|++||++.+|++.|+.....
T Consensus 306 ~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 306 YNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred HHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 8899999999999999999999999986553
No 192
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.43 E-value=2.3e-14 Score=155.93 Aligned_cols=96 Identities=24% Similarity=0.323 Sum_probs=72.6
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||++.+..++.|+|||||||+++||+| |+.|+......+ +. ..+..+.... .+......+
T Consensus 258 ~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~---~~----~~~~~~~~~~--------~~~~~~~~l 322 (382)
T 3tt0_A 258 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LF----KLLKEGHRMD--------KPSNCTNEL 322 (382)
T ss_dssp GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HH----HHHHTTCCCC--------CCSSCCHHH
T ss_pred ceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCCC--------CCccCCHHH
Confidence 5999999999999999999999999999999 999987654322 22 2222222111 111223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..||+.+|++||+|.||++.|+......
T Consensus 323 ~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 323 YMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999876654
No 193
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.43 E-value=1.8e-13 Score=145.65 Aligned_cols=84 Identities=20% Similarity=0.170 Sum_probs=71.1
Q ss_pred CCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCC-EEEccCCcCCCCCCccc--CCCCCEE
Q 004413 141 LKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLN-YLFLGNNSLSGTLPTQK--SENLQNI 217 (755)
Q Consensus 141 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~p~~~--~~~L~~L 217 (755)
+++|+.|+|++|.++......|..+++|+.|+|..| ++.....+|.++.+|+ .+++.+ .++...+..+ +++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 789999999999999777778999999999999998 7756667899999999 999998 6764433333 3799999
Q ss_pred EeecCcCCC
Q 004413 218 DLSYNHLSG 226 (755)
Q Consensus 218 ~Ls~N~l~g 226 (755)
++++|.++.
T Consensus 303 ~l~~n~i~~ 311 (329)
T 3sb4_A 303 LATGDKITT 311 (329)
T ss_dssp EECSSCCCE
T ss_pred EeCCCccCc
Confidence 999999983
No 194
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.43 E-value=7.1e-15 Score=155.02 Aligned_cols=97 Identities=22% Similarity=0.223 Sum_probs=68.3
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 649 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 649 (755)
+|+|||.+.+..++.|+|||||||+++||+||+.|+......... ......... +.. .+......+.
T Consensus 187 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-~~~~~~~~~---------~~~---~~~~~~~~l~ 253 (310)
T 3s95_A 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD-FGLNVRGFL---------DRY---CPPNCPPSFF 253 (310)
T ss_dssp GGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT-SSBCHHHHH---------HHT---CCTTCCTTHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH-Hhhhhhccc---------ccc---CCCCCCHHHH
Confidence 399999999999999999999999999999999987643221100 000000000 000 0112223577
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 650 GVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 650 ~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
+++..|++.+|++|||+.|+++.|+.....
T Consensus 254 ~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 899999999999999999999999876543
No 195
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.43 E-value=1.7e-14 Score=154.41 Aligned_cols=89 Identities=21% Similarity=0.338 Sum_probs=62.0
Q ss_pred ccccchhhhhc-----------CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC
Q 004413 569 HGYLAPEYAMR-----------GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL 637 (755)
Q Consensus 569 ~gy~aPE~~~~-----------~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 637 (755)
.+|+|||++.. ..++.++|||||||+++||+||+.|+....... . ...... ++..
T Consensus 173 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~----~~~~~~---------~~~~ 238 (343)
T 3dbq_A 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-S----KLHAII---------DPNH 238 (343)
T ss_dssp CSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-H----HHHHHH---------CTTS
T ss_pred cCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-H----HHHHHh---------cCCc
Confidence 57999999875 789999999999999999999999987543221 1 111111 1111
Q ss_pred -CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 -TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 -~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..++......+.+++..|++.+|.+||||.|+++
T Consensus 239 ~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 239 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 1111122245678899999999999999999985
No 196
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.42 E-value=3.2e-14 Score=148.54 Aligned_cols=94 Identities=22% Similarity=0.244 Sum_probs=71.2
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+....++.++||||||++++||+| |+.|+......+ +. ..+..+... ..+......+
T Consensus 185 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~----~~~~~~~~~--------~~~~~~~~~l 249 (291)
T 1xbb_A 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VT----AMLEKGERM--------GCPAGCPREM 249 (291)
T ss_dssp GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH----HHHHTTCCC--------CCCTTCCHHH
T ss_pred eeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HH----HHHHcCCCC--------CCCCCCCHHH
Confidence 4999999999999999999999999999999 999987654322 11 222222211 1122233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..||+.+|.+||++.+|++.|+....
T Consensus 250 ~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 250 YDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 889999999999999999999999987543
No 197
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.42 E-value=2.8e-14 Score=148.53 Aligned_cols=95 Identities=27% Similarity=0.395 Sum_probs=68.4
Q ss_pred ccccchhhh--hcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 569 HGYLAPEYA--MRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 569 ~gy~aPE~~--~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
..|+|||.+ ....++.++|||||||+++||+||+.|++....... ... ......+ ..+.+ +.....
T Consensus 190 ~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~---~~~~~~~-----~~~~~---~~~~~~ 257 (287)
T 4f0f_A 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI---NMIREEG-----LRPTI---PEDCPP 257 (287)
T ss_dssp CTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHH---HHHHHSC-----CCCCC---CTTSCH
T ss_pred ccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHH---HHHhccC-----CCCCC---CcccCH
Confidence 469999998 456789999999999999999999999976543321 111 1111111 11111 122234
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVVAMLAG 675 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~~~L~~ 675 (755)
.+.+++..|++.+|.+|||+.||++.|+.
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 258 RLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 67889999999999999999999999975
No 198
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.42 E-value=1.8e-14 Score=149.75 Aligned_cols=94 Identities=18% Similarity=0.280 Sum_probs=69.6
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||||++++||+| |+.|+......+. . ..+..+. .... +......+
T Consensus 186 ~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~---~----~~~~~~~-----~~~~---~~~~~~~l 250 (283)
T 3gen_A 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET---A----EHIAQGL-----RLYR---PHLASEKV 250 (283)
T ss_dssp GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH---H----HHHHTTC-----CCCC---CTTCCHHH
T ss_pred ccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH---H----HHHhccc-----CCCC---CCcCCHHH
Confidence 4999999999999999999999999999999 9999876543221 1 1111111 1111 11112457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+|||+.|+++.|+....
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 789999999999999999999999987543
No 199
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.42 E-value=4.8e-14 Score=151.37 Aligned_cols=40 Identities=33% Similarity=0.441 Sum_probs=35.4
Q ss_pred cccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCc
Q 004413 570 GYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSL 609 (755)
Q Consensus 570 gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~ 609 (755)
+|||||.+.+. .++.++||||+||+++||+||+.|+....
T Consensus 211 ~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 211 GFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 49999998775 58999999999999999999999986543
No 200
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.41 E-value=2.1e-14 Score=152.34 Aligned_cols=96 Identities=23% Similarity=0.260 Sum_probs=72.1
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+....++.++|||||||+++||+| |+.|+......+. . ..+..+... ..+......+
T Consensus 204 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~----~~~~~~~~~--------~~~~~~~~~l 268 (323)
T 3qup_A 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI---Y----NYLIGGNRL--------KQPPECMEEV 268 (323)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H----HHHHTTCCC--------CCCTTCCHHH
T ss_pred cccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH---H----HHHhcCCCC--------CCCCccCHHH
Confidence 5999999999999999999999999999999 8999876544321 1 111111111 1112233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..|++.+|.+|||+.++++.|+.....+
T Consensus 269 ~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 269 YDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999876653
No 201
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.41 E-value=2.2e-14 Score=156.33 Aligned_cols=89 Identities=21% Similarity=0.346 Sum_probs=61.7
Q ss_pred ccccchhhhhc-----------CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC
Q 004413 569 HGYLAPEYAMR-----------GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL 637 (755)
Q Consensus 569 ~gy~aPE~~~~-----------~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 637 (755)
.+|||||++.. ..++.|+|||||||+++||+||+.|+....... ....... ++..
T Consensus 220 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----~~~~~~~---------~~~~ 285 (390)
T 2zmd_A 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAII---------DPNH 285 (390)
T ss_dssp GGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----HHHHHHH---------CTTS
T ss_pred CCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-----HHHHHHh---------Cccc
Confidence 46999999875 479999999999999999999999997543211 1111111 1111
Q ss_pred -CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 -TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 -~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..++......+.+++..|++.+|.+||++.||++
T Consensus 286 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 0111111345678889999999999999999985
No 202
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.41 E-value=2.9e-15 Score=147.12 Aligned_cols=147 Identities=20% Similarity=0.245 Sum_probs=121.6
Q ss_pred eEEecCCcCcCCCch------hhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEE
Q 004413 2 LLSVAHNVFSGSVPR------ELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTL 75 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~------~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 75 (755)
.++++.+.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+..+++|++|
T Consensus 22 ~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L 98 (198)
T 1ds9_A 22 ATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEEL 98 (198)
T ss_dssp CTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEE
T ss_pred CcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEE
Confidence 467888888888876 89999999999999999985 67 8999999999999999997 678888888999999
Q ss_pred EccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCC-ccccCCCCCCeeecCCCCCCCCChh----------hhcCCCCC
Q 004413 76 WASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP-SSLSKLASLDSLRISDIYNVSSSLD----------FVMSLKNL 144 (755)
Q Consensus 76 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~n~~~~~~~~----------~l~~l~~L 144 (755)
++++|++++ +| .+..+++|++|++++|.++...+ ..+..+++|++|++++|.+....+. .+..+++|
T Consensus 99 ~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L 176 (198)
T 1ds9_A 99 WISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNL 176 (198)
T ss_dssp EEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSC
T ss_pred ECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCc
Confidence 999999995 55 68899999999999999984322 4788999999999999976544222 35666777
Q ss_pred CEEEeeCcccc
Q 004413 145 TDLSLRNALIT 155 (755)
Q Consensus 145 ~~L~L~~n~l~ 155 (755)
+.|+ +|.++
T Consensus 177 ~~Ld--~~~i~ 185 (198)
T 1ds9_A 177 KKLD--GMPVD 185 (198)
T ss_dssp SEEC--CGGGT
T ss_pred EEEC--CcccC
Confidence 7665 45444
No 203
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.41 E-value=9.4e-15 Score=152.19 Aligned_cols=94 Identities=22% Similarity=0.267 Sum_probs=70.2
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||||++++||+| |+.|+....... +.+. +..+. .. ..+......+
T Consensus 177 ~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~----~~~~~-----~~---~~~~~~~~~l 241 (288)
T 3kfa_A 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYEL----LEKDY-----RM---ERPEGCPEKV 241 (288)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHH----HHTTC-----CC---CCCTTCCHHH
T ss_pred CcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HhccC-----CC---CCCCCCCHHH
Confidence 5999999999999999999999999999999 999987654332 1111 11111 01 1112223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+||++.||+++|+....
T Consensus 242 ~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 789999999999999999999999987544
No 204
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.41 E-value=6.7e-15 Score=152.59 Aligned_cols=95 Identities=25% Similarity=0.343 Sum_probs=70.7
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+..+.++.++||||||++++||+| |+.|+......+ +.. .+..+.. +.. +......+
T Consensus 175 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~----~~~~~~~-----~~~---~~~~~~~l 239 (279)
T 1qpc_A 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---VIQ----NLERGYR-----MVR---PDNCPEEL 239 (279)
T ss_dssp TTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH----HHHTTCC-----CCC---CTTCCHHH
T ss_pred CccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH---HHH----HHhcccC-----CCC---cccccHHH
Confidence 5999999999999999999999999999999 899987654322 111 1122211 111 11223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..|++.+|++|||+.++++.|+.....
T Consensus 240 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999976544
No 205
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.41 E-value=7.8e-14 Score=151.42 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=63.1
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccc--c------------cc
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSL--G------------LV 633 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~--~------------~~ 633 (755)
+.|||||.+.+. .++.++||||+||+++||+||+.|+......+.. .-+.......... . .+
T Consensus 226 ~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l---~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~ 302 (398)
T 4b99_A 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL---QLIMMVLGTPSPAVIQAVGAERVRAYIQSL 302 (398)
T ss_dssp CTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHH---HHHHHHHCCCCGGGTC-----CHHHHHHSS
T ss_pred hHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHH---HHHHHhcCCCChHHhhhhhhhhhhhhhhcC
Confidence 459999998765 5699999999999999999999999765433321 1111111000000 0 00
Q ss_pred CCCCCCCCHH-----HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 634 DPTLTEFNDK-----EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 634 d~~l~~~~~~-----~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+. ...+.+ ....+.++...|++.||.+|||+.|+++
T Consensus 303 ~~~-~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 303 PPR-QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCC-CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCc-CCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 011111 1235677899999999999999999864
No 206
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.41 E-value=4.4e-14 Score=147.16 Aligned_cols=98 Identities=18% Similarity=0.206 Sum_probs=73.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||||++++||+| |+.|+......+ +... +..+... ..+......+
T Consensus 178 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----i~~~~~~--------~~~~~~~~~l 242 (287)
T 1u59_A 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAF----IEQGKRM--------ECPPECPPEL 242 (287)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHHH----HHTTCCC--------CCCTTCCHHH
T ss_pred cccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HHHH----HhcCCcC--------CCCCCcCHHH
Confidence 5999999999999999999999999999999 999987654322 2221 2222111 1122233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccCCC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVGKV 682 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~~~ 682 (755)
.+++..|++.+|.+||++.+|++.|+........
T Consensus 243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 243 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 7899999999999999999999999987655443
No 207
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.40 E-value=3.7e-14 Score=146.89 Aligned_cols=95 Identities=24% Similarity=0.249 Sum_probs=70.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+.+..++.++||||||++++||+| |+.|+......+ +. ..+..+. .+.. +......
T Consensus 178 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~----~~~~~~~-----~~~~---~~~~~~~ 242 (278)
T 1byg_A 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PRVEKGY-----KMDA---PDGCPPA 242 (278)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HH----HHHTTTC-----CCCC---CTTCCHH
T ss_pred ccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHhcCC-----CCCC---cccCCHH
Confidence 46999999999999999999999999999999 999987654322 11 1122221 1111 1222346
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
+.+++..|++.+|.+||++.|+++.|+....
T Consensus 243 l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 243 VYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 7788999999999999999999999987543
No 208
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.40 E-value=1.1e-12 Score=125.14 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=48.6
Q ss_pred CEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCC
Q 004413 25 TVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGN 104 (755)
Q Consensus 25 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 104 (755)
+.|++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 44445544444 2343332 44455555555554444444445555555555555554433334444555555555555
Q ss_pred CCCCCCCccccCCCCCCeeecCCCCC
Q 004413 105 SFQGPIPSSLSKLASLDSLRISDIYN 130 (755)
Q Consensus 105 ~l~~~~p~~l~~l~~L~~L~l~~n~~ 130 (755)
++++..+..|..+++|+.|+|++|.+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~ 114 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPW 114 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCC
Confidence 55433333444455555555555443
No 209
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.40 E-value=2.9e-13 Score=129.99 Aligned_cols=62 Identities=21% Similarity=0.293 Sum_probs=31.4
Q ss_pred cCCCCCCEEEeeCccccCCCCc--cccCCCCCCEEeCCCCCCCCCCccc----ccCCCCCCEEEccCCcC
Q 004413 139 MSLKNLTDLSLRNALITGSIPS--GIGELQNLQTLDLSFNNLTGQIPRT----LFNIGSLNYLFLGNNSL 202 (755)
Q Consensus 139 ~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~Ls~N~l 202 (755)
..+++|+.|+|++|.++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|+++.|.+
T Consensus 85 ~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 85 QALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp HHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred hcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 33444444445555543 2333 4555566666666666655 33432 55555555555555544
No 210
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.40 E-value=5.8e-14 Score=147.82 Aligned_cols=100 Identities=15% Similarity=0.100 Sum_probs=66.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcC---cccc-------ccCCCC-
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENN---QSLG-------LVDPTL- 637 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~~-------~~d~~l- 637 (755)
..|+|||.+....++.++|||||||+++||+||+.|+......+. ...+....... .... .+.+..
T Consensus 183 ~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (308)
T 3g33_A 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGP 259 (308)
T ss_dssp CSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCC
T ss_pred ccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChhhccchhhccccccCCCCC
Confidence 469999999999999999999999999999999999976543321 12222211110 0000 000000
Q ss_pred ---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 ---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ---~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.....+....+.++...|++.+|++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 260 RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0001112346778999999999999999999874
No 211
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.40 E-value=6.3e-14 Score=147.64 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=71.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++||||||++++||+||+.|+...... ...+.. .+..+....... ..+ ...+
T Consensus 200 ~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~-~~~~~~~~~~~~---~~~----~~~l 267 (310)
T 2wqm_A 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCK-KIEQCDYPPLPS---DHY----SEEL 267 (310)
T ss_dssp CSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHHH-HHHTTCSCCCCT---TTS----CHHH
T ss_pred eeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHHH-HhhcccCCCCcc---ccc----CHHH
Confidence 3599999999999999999999999999999999998643211 111121 122222111110 112 2357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccCC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVGK 681 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~~ 681 (755)
.+++..|++.+|.+||++.+|++.|+.......
T Consensus 268 ~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 788999999999999999999999998765543
No 212
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.40 E-value=5.2e-15 Score=156.71 Aligned_cols=102 Identities=21% Similarity=0.213 Sum_probs=71.2
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh--------HHHHHHHHHHHhhcCccccccCCCCCCCC
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME--------KIYLLEWAWNLHENNQSLGLVDPTLTEFN 641 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 641 (755)
.|+|||.+.+..++.++||||||++++||+||+.|+....... ...-...+......+.. ...+
T Consensus 202 ~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 273 (318)
T 3lxp_A 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER--------LPRP 273 (318)
T ss_dssp GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC--------CCCC
T ss_pred eeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC--------CCCC
Confidence 3999999999999999999999999999999999976422110 00001111122222211 1112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 642 DKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 642 ~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
......+.+++..||+.+|.+|||+.|+++.|+...+.
T Consensus 274 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 274 DKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 23345688899999999999999999999999876543
No 213
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.39 E-value=1e-13 Score=148.46 Aligned_cols=104 Identities=11% Similarity=0.029 Sum_probs=69.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+....... ..+. ......... ....+..... .......+
T Consensus 224 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~-~~~~~~~~~-~~~~~~~~~~--~~~~~~~l 298 (345)
T 2v62_A 224 IEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-VAVQ-TAKTNLLDE-LPQSVLKWAP--SGSSCCEI 298 (345)
T ss_dssp TTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-HHHH-HHHHHHHHT-TTHHHHHHSC--TTSCCHHH
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-HHHH-HHHHhhccc-ccHHHHhhcc--ccccHHHH
Confidence 46999999999999999999999999999999999985422111 1111 111111110 0000000000 00123467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDI 677 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~ 677 (755)
.+++..||+.+|++||++.+|++.|+...
T Consensus 299 ~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 299 AQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 78899999999999999999999998754
No 214
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.39 E-value=4e-14 Score=150.48 Aligned_cols=96 Identities=25% Similarity=0.331 Sum_probs=71.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||||++++||+| |+.|+......+ +.++ +..+... .. +......+
T Consensus 210 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----~~~~~~~-----~~---~~~~~~~l 274 (327)
T 2yfx_A 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VLEF----VTSGGRM-----DP---PKNCPGPV 274 (327)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHH----HHTTCCC-----CC---CTTCCHHH
T ss_pred ceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH---HHHH----HhcCCCC-----CC---CCCCCHHH
Confidence 5999999999999999999999999999999 999987544322 2222 2222111 11 11223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..|++.+|.+||++.+|++.|+.....+
T Consensus 275 ~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 78999999999999999999999998766543
No 215
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.39 E-value=7e-14 Score=146.26 Aligned_cols=100 Identities=17% Similarity=0.224 Sum_probs=72.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|++.....+ ......... .... ..+........+
T Consensus 176 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~-~~~~----~~~~~~~~~~~l 244 (294)
T 4eqm_A 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS------IAIKHIQDS-VPNV----TTDVRKDIPQSL 244 (294)
T ss_dssp CSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH------HHHHHHSSC-CCCH----HHHSCTTSCHHH
T ss_pred ccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhhcc-CCCc----chhcccCCCHHH
Confidence 46999999999999999999999999999999999997654322 111222111 1100 001112223467
Q ss_pred HHHHHHhcccCCCCCC-CHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRP-PMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RP-sm~~v~~~L~~~~~~ 679 (755)
.++..+|++.+|.+|| ++.++.+.|+.....
T Consensus 245 ~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 245 SNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred HHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 7899999999999998 999999999876554
No 216
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.39 E-value=6e-14 Score=144.46 Aligned_cols=95 Identities=21% Similarity=0.321 Sum_probs=68.5
Q ss_pred ccccchhhhhcCCCCc---cceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAMRGHLTE---KADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~---ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
..|+|||.+.....+. |+|||||||+++||+||+.|+......+. .......+. .+.+ +....
T Consensus 172 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~-----~~~~---~~~~~ 237 (271)
T 3kmu_A 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI------GMKVALEGL-----RPTI---PPGIS 237 (271)
T ss_dssp GGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH------HHHHHHSCC-----CCCC---CTTCC
T ss_pred ccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH------HHHHHhcCC-----CCCC---CCCCC
Confidence 5799999998765554 89999999999999999999976543221 112222211 1111 11223
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHhccc
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 677 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~ 677 (755)
..+.+++..|++.+|++|||+.||++.|+...
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 45778899999999999999999999998754
No 217
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.39 E-value=1.8e-14 Score=166.15 Aligned_cols=243 Identities=17% Similarity=0.124 Sum_probs=125.3
Q ss_pred CeEEecCCc--CcCC-CchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccC--------------------
Q 004413 1 MLLSVAHNV--FSGS-VPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWG-------------------- 57 (755)
Q Consensus 1 ~~L~Ls~n~--l~~~-~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-------------------- 57 (755)
++|+|++|. ++.. ++..+.++++|++|+|++|...+.++..+.++++|++|++..+.
T Consensus 187 ~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~ 266 (594)
T 2p1m_B 187 VSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKE 266 (594)
T ss_dssp CEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTT
T ss_pred cEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCC
Confidence 467888876 2211 12223456888888888873222255556666666666654331
Q ss_pred ------CC----CCCchhhhcCCCCCEEEccCCCCCCCc-chhhcCCCCCcEEEccCCCCCCC-CCccccCCCCCCeeec
Q 004413 58 ------AG----GEIPSTYAKLRNMQTLWASDAPFTGKI-PDFIGNWTKLKSLRFQGNSFQGP-IPSSLSKLASLDSLRI 125 (755)
Q Consensus 58 ------l~----~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l 125 (755)
+. ..++..+..+++|++|++++|.++... ...+.++++|++|++++| ++.. ++.....+++|+.|++
T Consensus 267 L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L 345 (594)
T 2p1m_B 267 LRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRV 345 (594)
T ss_dssp CCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEE
T ss_pred cccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEE
Confidence 11 112333345678888888888765332 223556778888888776 3311 1222234677777777
Q ss_pred CC---------CCCCCCChhhh-cCCCCCCEEEeeCccccCCCCcccc-CCCCCCEEeCC--C----CCCCCC-----Cc
Q 004413 126 SD---------IYNVSSSLDFV-MSLKNLTDLSLRNALITGSIPSGIG-ELQNLQTLDLS--F----NNLTGQ-----IP 183 (755)
Q Consensus 126 ~~---------n~~~~~~~~~l-~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p 183 (755)
.+ +.+.......+ ..+++|+.|.+..|.+++.....+. .+++|+.|+|+ + |.+++. ++
T Consensus 346 ~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~ 425 (594)
T 2p1m_B 346 FPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFG 425 (594)
T ss_dssp ECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHH
T ss_pred ecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHH
Confidence 33 12221112222 2356666666666666544333333 35666666666 2 344421 11
Q ss_pred ccccCCCCCCEEEccCCcCCCCCCcc---cCCCCCEEEeecCcCCCCCcccc----ccccccccccccc
Q 004413 184 RTLFNIGSLNYLFLGNNSLSGTLPTQ---KSENLQNIDLSYNHLSGPFPSWV----TSNLQMNLVANNF 245 (755)
Q Consensus 184 ~~l~~l~~L~~L~Ls~N~l~~~~p~~---~~~~L~~L~Ls~N~l~g~ip~~~----~~~~~l~l~~n~~ 245 (755)
..+..+++|+.|++++ .+++..... ..++|+.|+|++|.+++..+..+ .....|++++|.+
T Consensus 426 ~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 426 AIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 1244556666666654 443322211 13556666666666654333322 1222456666655
No 218
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.39 E-value=6.8e-14 Score=148.67 Aligned_cols=97 Identities=21% Similarity=0.208 Sum_probs=72.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+....++.++||||||++++||+| |+.|+......+ ....+..+.. .. .+......
T Consensus 205 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-------~~~~~~~~~~-----~~---~~~~~~~~ 269 (327)
T 1fvr_A 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYEKLPQGYR-----LE---KPLNCDDE 269 (327)
T ss_dssp TTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-------HHHHGGGTCC-----CC---CCTTBCHH
T ss_pred ccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-------HHHHhhcCCC-----CC---CCCCCCHH
Confidence 36999999999999999999999999999999 999987654322 1112222211 11 11122346
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
+.+++..|++.+|.+||++.|+++.|+......
T Consensus 270 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 270 VYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 778999999999999999999999998866553
No 219
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.39 E-value=3.3e-14 Score=146.22 Aligned_cols=94 Identities=28% Similarity=0.371 Sum_probs=69.6
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+....++.++||||||++++||+| |+.|+......+ +.. .+..+.. ... +......+
T Consensus 170 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~----~i~~~~~--~~~------~~~~~~~l 234 (267)
T 3t9t_A 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVE----DISTGFR--LYK------PRLASTHV 234 (267)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHH----HHHTTCC--CCC------CTTSCHHH
T ss_pred cccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH---HHH----HHhcCCc--CCC------CccCcHHH
Confidence 5999999999999999999999999999999 899987544322 111 1122211 011 11123457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|++||++.|+++.|+...+
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 235 YQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 789999999999999999999999987643
No 220
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.39 E-value=7.1e-14 Score=148.84 Aligned_cols=95 Identities=21% Similarity=0.331 Sum_probs=69.7
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+.+..++.++|||||||+++||+| |+.|+........ +. .....+.. +.. +......+
T Consensus 231 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~----~~~~~~~~-----~~~---~~~~~~~l 296 (333)
T 2i1m_A 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--FY----KLVKDGYQ-----MAQ---PAFAPKNI 296 (333)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--HH----HHHHHTCC-----CCC---CTTCCHHH
T ss_pred cccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--HH----HHHhcCCC-----CCC---CCCCCHHH
Confidence 5999999999999999999999999999999 8999875433221 11 22222111 111 11123467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+|||+.||++.|+....
T Consensus 297 ~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 297 YSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 789999999999999999999999987543
No 221
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.39 E-value=8.7e-14 Score=149.29 Aligned_cols=92 Identities=16% Similarity=0.166 Sum_probs=65.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||++.+..++.++|||||||+++||+||+.|+........ ....+..+.. ....+..... ...+
T Consensus 214 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~i~~~~~-~~~~~~~~~~----~~~~ 282 (349)
T 2w4o_A 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF------MFRRILNCEY-YFISPWWDEV----SLNA 282 (349)
T ss_dssp GGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH------HHHHHHTTCC-CCCTTTTTTS----CHHH
T ss_pred CCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH------HHHHHHhCCC-ccCCchhhhC----CHHH
Confidence 469999999999999999999999999999999999875433221 1111222211 1111111222 3357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|++|||+.|+++
T Consensus 283 ~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 283 KDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 78899999999999999999975
No 222
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.38 E-value=2.8e-13 Score=145.92 Aligned_cols=101 Identities=20% Similarity=0.215 Sum_probs=65.9
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHH----------hhc-CccccccCCC
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNL----------HEN-NQSLGLVDPT 636 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~----------~~~-~~~~~~~d~~ 636 (755)
.+|+|||.+.+. .++.++|||||||+++||+||+.|+......+. +...+... +.. ....+..+..
T Consensus 195 ~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (360)
T 3e3p_A 195 RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSK 272 (360)
T ss_dssp GGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCC
T ss_pred cceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCCCHHHHHhcccchhhccccccc
Confidence 459999998665 489999999999999999999999986543322 22221110 000 0000000000
Q ss_pred -C------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 637 -L------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 637 -l------~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
. .+........+.+++..|++.+|.+|||+.||++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 273 GIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 1112224567889999999999999999999974
No 223
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.38 E-value=6.5e-14 Score=149.27 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=72.3
Q ss_pred ccccchhhhhcCCCCcc------ceeeeehheeehhhhC----------CcCCCCCchhhHHHHHHHHHHHhhcCccccc
Q 004413 569 HGYLAPEYAMRGHLTEK------ADVFSFGVAALEIISG----------RANSDNSLDMEKIYLLEWAWNLHENNQSLGL 632 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~k------sDVysfGvvllElltg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 632 (755)
.+|+|||.+.....+.+ +|||||||++|||+|| +.|+........ .. ......... ..
T Consensus 210 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~~-~~~~~~~~~----~~ 283 (337)
T 3mdy_A 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-SY-EDMREIVCI----KK 283 (337)
T ss_dssp GGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-CH-HHHHHHHTT----SC
T ss_pred cceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC-ch-hhhHHHHhh----hc
Confidence 46999999988777765 9999999999999999 566543322110 00 111111111 11
Q ss_pred cCCCCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 633 VDPTLTE--FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 633 ~d~~l~~--~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
..+.+.. ...++...+.+++..||+.+|.+|||+.||++.|+...+..
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 2222211 12367788999999999999999999999999999876653
No 224
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.38 E-value=6.4e-14 Score=146.54 Aligned_cols=96 Identities=23% Similarity=0.275 Sum_probs=68.4
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRVI 649 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 649 (755)
.|+|||...+..++.++||||||++++||+||+.|........ .+..+ ...+... . .+......+.
T Consensus 193 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~--~~~~~----~~~~~~~-----~---~~~~~~~~l~ 258 (298)
T 3pls_A 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF--DLTHF----LAQGRRL-----P---QPEYCPDSLY 258 (298)
T ss_dssp GGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG--GHHHH----HHTTCCC-----C---CCTTCCHHHH
T ss_pred cccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH--HHHHH----hhcCCCC-----C---CCccchHHHH
Confidence 6999999999999999999999999999999666644322211 12211 1111110 0 1112234677
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 650 GVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 650 ~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
+++..|++.+|.+|||+.+++++|+.....
T Consensus 259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 899999999999999999999999986554
No 225
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.38 E-value=5.1e-14 Score=148.59 Aligned_cols=94 Identities=22% Similarity=0.320 Sum_probs=70.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.|+|||.+.+..++.++||||||++++||+| |+.|+......+ +... ...+... . .+......+
T Consensus 214 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~----~~~~~~~-----~---~~~~~~~~l 278 (313)
T 3brb_A 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYDY----LLHGHRL-----K---QPEDCLDEL 278 (313)
T ss_dssp GGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHH----HHTTCCC-----C---CBTTCCHHH
T ss_pred cccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHHH----HHcCCCC-----C---CCccccHHH
Confidence 5999999999999999999999999999999 888887654332 1111 1111111 1 112223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+||++.++++.|+....
T Consensus 279 ~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 279 YEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 889999999999999999999999987654
No 226
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.38 E-value=4.6e-14 Score=150.46 Aligned_cols=110 Identities=13% Similarity=0.061 Sum_probs=71.5
Q ss_pred ccccchhhhhc-------CCCCccceeeeehheeehhhhCCcCCCCCchhhH------H-----HHHHHHHHHhhcCccc
Q 004413 569 HGYLAPEYAMR-------GHLTEKADVFSFGVAALEIISGRANSDNSLDMEK------I-----YLLEWAWNLHENNQSL 630 (755)
Q Consensus 569 ~gy~aPE~~~~-------~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~------~-----~l~~~~~~~~~~~~~~ 630 (755)
..|+|||.+.+ ..++.++|||||||+++||+||+.|+........ . ...+............
T Consensus 192 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (336)
T 3g2f_A 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQR 271 (336)
T ss_dssp GGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCC
T ss_pred cceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccC
Confidence 46999999876 4677899999999999999999877543211000 0 0001111111111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 631 GLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 631 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
..+.... .........+.+++..||+.+|++|||+.||++.|+.....
T Consensus 272 ~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 272 PKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCccc-ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 1111111 12234667799999999999999999999999999987654
No 227
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.38 E-value=1.3e-13 Score=146.67 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=64.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++|||||||+++||+||+.|+......+. .. . ...... ....+.... ....+
T Consensus 197 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~---~-i~~~~~-~~~~~~~~~----~~~~~ 264 (327)
T 3lm5_A 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET---YL---N-ISQVNV-DYSEETFSS----VSQLA 264 (327)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH---H-HHHTCC-CCCTTTTTT----SCHHH
T ss_pred cCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HH---H-HHhccc-ccCchhhcc----cCHHH
Confidence 479999999999999999999999999999999999976543221 11 1 111110 011111112 23457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|.+|||+.|+++
T Consensus 265 ~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 265 TDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHcCCChhhCcCHHHHhC
Confidence 78899999999999999999864
No 228
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=2e-12 Score=123.88 Aligned_cols=104 Identities=19% Similarity=0.269 Sum_probs=57.7
Q ss_pred CEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCC
Q 004413 25 TVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGN 104 (755)
Q Consensus 25 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 104 (755)
+.+++++|.++ .+|..+. ++|++|+|++|++.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 4454443 55556666666655555555555666666666666655433344555566666666666
Q ss_pred CCCCCCCccccCCCCCCeeecCCCCCC
Q 004413 105 SFQGPIPSSLSKLASLDSLRISDIYNV 131 (755)
Q Consensus 105 ~l~~~~p~~l~~l~~L~~L~l~~n~~~ 131 (755)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 665433334555666666666655544
No 229
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.38 E-value=1.1e-14 Score=154.89 Aligned_cols=101 Identities=24% Similarity=0.192 Sum_probs=69.1
Q ss_pred ccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHH--------HHHHHHHHHhhcCccccccCCCCCCCCH
Q 004413 571 YLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKI--------YLLEWAWNLHENNQSLGLVDPTLTEFND 642 (755)
Q Consensus 571 y~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 642 (755)
|+|||.+.+..++.++||||||++++||+||+.|+......... .....+......+.. ...+.
T Consensus 196 y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 267 (327)
T 3lxl_A 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR--------LPAPP 267 (327)
T ss_dssp GSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCC--------CCCCT
T ss_pred ccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccC--------CCCCC
Confidence 99999999999999999999999999999999997542211000 000111111111111 11122
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 643 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 643 ~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.....+.+++..|++.+|.+|||+.||++.|+.....
T Consensus 268 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 3345678899999999999999999999999986554
No 230
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.38 E-value=6e-14 Score=148.09 Aligned_cols=95 Identities=25% Similarity=0.324 Sum_probs=70.2
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+.+..++.++||||||++++||+| |+.|+......+. +...+..+... .. +......+
T Consensus 215 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~------~~~~~~~~~~~-----~~---~~~~~~~l 280 (316)
T 2xir_A 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTRM-----RA---PDYTTPEM 280 (316)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH------HHHHHHHTCCC-----CC---CTTCCHHH
T ss_pred eecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH------HHHHhccCccC-----CC---CCCCCHHH
Confidence 5999999999999999999999999999999 9999875443221 11222222111 11 11123357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+|||+.||++.|+....
T Consensus 281 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 281 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 788999999999999999999999987654
No 231
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.37 E-value=1.2e-13 Score=143.86 Aligned_cols=95 Identities=22% Similarity=0.339 Sum_probs=65.1
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+.+ ..++.++|||||||+++||+||+.|......... ..... ...... .+. ....
T Consensus 181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~--~~~~~---~~~~~~----~~~-------~~~~ 244 (289)
T 4fvq_A 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--KLQFY---EDRHQL----PAP-------KAAE 244 (289)
T ss_dssp TTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHH---HTTCCC----CCC-------SSCT
T ss_pred CcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH--HHHHh---hccCCC----CCC-------CCHH
Confidence 46999999987 7899999999999999999996655433222111 11111 111111 111 1224
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
+.+++..|++.+|.+|||+.|+++.|+.....
T Consensus 245 l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 245 LANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp THHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 67789999999999999999999999987654
No 232
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.37 E-value=8.4e-14 Score=145.11 Aligned_cols=95 Identities=18% Similarity=0.301 Sum_probs=70.2
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||||++++||+| |+.|+......+ + .......+... + .+......+
T Consensus 189 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~---~~~~~~~~~~~----~----~~~~~~~~l 254 (291)
T 1u46_A 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ---I---LHKIDKEGERL----P----RPEDCPQDI 254 (291)
T ss_dssp GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---H---HHHHHTSCCCC----C----CCTTCCHHH
T ss_pred eeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH---H---HHHHHccCCCC----C----CCcCcCHHH
Confidence 5999999999999999999999999999999 999987654322 1 12222211110 1 111223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+||++.++++.|+....
T Consensus 255 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 255 YNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 789999999999999999999999987543
No 233
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.37 E-value=1e-13 Score=161.06 Aligned_cols=94 Identities=23% Similarity=0.337 Sum_probs=70.8
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|||||.+....++.++|||||||++|||+| |+.|+......+ +...+ ..+.... .+......+
T Consensus 557 ~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~~~i----~~~~~~~--------~~~~~~~~l 621 (656)
T 2j0j_A 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRI----ENGERLP--------MPPNCPPTL 621 (656)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHH----HHTCCCC--------CCTTCCHHH
T ss_pred ceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHH----HcCCCCC--------CCccccHHH
Confidence 6999999999999999999999999999997 999987654332 22222 1221111 122233467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..||+.+|.+||++.||++.|+....
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 789999999999999999999999987543
No 234
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.37 E-value=5.1e-14 Score=145.93 Aligned_cols=87 Identities=22% Similarity=0.259 Sum_probs=64.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+..++.++||||||++++||+||+.|+......+. . ..+.... ..+ +......+
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~----~~~~~~~------~~~---~~~~~~~~ 234 (279)
T 3fdn_A 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---Y----KRISRVE------FTF---PDFVTEGA 234 (279)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---H----HHHHHTC------CCC---CTTSCHHH
T ss_pred CCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH---H----HHHHhCC------CCC---CCcCCHHH
Confidence 469999999999999999999999999999999999876443221 1 1111111 111 11122356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|.+||++.||++
T Consensus 235 ~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 235 RDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhccChhhCCCHHHHhh
Confidence 78899999999999999999986
No 235
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.37 E-value=2.7e-13 Score=150.00 Aligned_cols=91 Identities=14% Similarity=0.183 Sum_probs=65.9
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
++|+|||.+....++.++||||+||+++||+||+.|+......+ +. ..+..+.. ....+.....+ ..+
T Consensus 177 ~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~---~~----~~i~~~~~-~~~~~~~~~~s----~~~ 244 (444)
T 3soa_A 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR---LY----QQIKAGAY-DFPSPEWDTVT----PEA 244 (444)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HH----HHHHHTCC-CCCTTTTTTSC----HHH
T ss_pred cccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH---HH----HHHHhCCC-CCCccccccCC----HHH
Confidence 57999999999999999999999999999999999987644322 11 12222221 11111112222 356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|.+|||+.|+++
T Consensus 245 ~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 245 KDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHcCCChhHCCCHHHHhc
Confidence 77889999999999999999986
No 236
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.37 E-value=1.2e-13 Score=152.17 Aligned_cols=92 Identities=16% Similarity=0.175 Sum_probs=59.6
Q ss_pred ccccchhhhh-----cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 004413 569 HGYLAPEYAM-----RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 643 (755)
Q Consensus 569 ~gy~aPE~~~-----~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 643 (755)
++|||||++. .+.++.++|||||||+++||+||+.|+......+. ...+......-. +.......+
T Consensus 240 ~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~----~p~~~~~~s-- 310 (437)
T 4aw2_A 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMNHKERFQ----FPTQVTDVS-- 310 (437)
T ss_dssp GGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCC----CCSSCCCSC--
T ss_pred cCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH---HHhhhhcccccc----CCcccccCC--
Confidence 5699999987 57899999999999999999999999986543321 111111000000 111111222
Q ss_pred HHHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 004413 644 EALRVIGVALLCTQASPMM--RPPMSRVVA 671 (755)
Q Consensus 644 ~~~~~~~l~~~C~~~~p~~--RPsm~~v~~ 671 (755)
..+.++...|+..+|++ ||++.|+.+
T Consensus 311 --~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 311 --ENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp --HHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred --HHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 23555666777666766 999999975
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.37 E-value=3.8e-13 Score=146.25 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=38.5
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCch
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLD 610 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~ 610 (755)
..|+|||++.+..++.++|||||||+++||+||+.|+.....
T Consensus 222 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 469999999999999999999999999999999999986543
No 238
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.37 E-value=4.2e-14 Score=163.13 Aligned_cols=245 Identities=14% Similarity=0.131 Sum_probs=150.9
Q ss_pred CeEEecCC-cCcCC-CchhhcCCCCCCEEEccCccCCCCCccccc----CCccCcEEEccccC--CCCC-CchhhhcCCC
Q 004413 1 MLLSVAHN-VFSGS-VPRELGNLKELTVLSFGNNNFSGTLPPEIG----NLAKLEQLYLNSWG--AGGE-IPSTYAKLRN 71 (755)
Q Consensus 1 ~~L~Ls~n-~l~~~-~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~----~l~~L~~L~L~~n~--l~~~-~p~~~~~l~~ 71 (755)
++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|+|++|. +... ++..+.++++
T Consensus 133 ~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~ 212 (594)
T 2p1m_B 133 KVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPN 212 (594)
T ss_dssp CEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTT
T ss_pred cEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCC
Confidence 45677766 44432 333344677777777777766544333332 45567777776665 1100 1111234466
Q ss_pred CCEEEccCCC--------------------------------------------------CCC----CcchhhcCCCCCc
Q 004413 72 MQTLWASDAP--------------------------------------------------FTG----KIPDFIGNWTKLK 97 (755)
Q Consensus 72 L~~L~L~~n~--------------------------------------------------l~~----~~p~~~~~l~~L~ 97 (755)
|++|++++|. +.. .++..+..+++|+
T Consensus 213 L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~ 292 (594)
T 2p1m_B 213 LKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLT 292 (594)
T ss_dssp CCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCC
T ss_pred CcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCC
Confidence 6666666551 111 1333334578999
Q ss_pred EEEccCCCCCCCC-CccccCCCCCCeeecCCCCCCCCChh-hhcCCCCCCEEEeeC---------ccccCCCCccc-cCC
Q 004413 98 SLRFQGNSFQGPI-PSSLSKLASLDSLRISDIYNVSSSLD-FVMSLKNLTDLSLRN---------ALITGSIPSGI-GEL 165 (755)
Q Consensus 98 ~L~L~~n~l~~~~-p~~l~~l~~L~~L~l~~n~~~~~~~~-~l~~l~~L~~L~L~~---------n~l~~~~p~~~-~~l 165 (755)
+|+|++|.+++.. ...+..+++|+.|++++| +...... ....+++|+.|++.+ +.+++.....+ ..+
T Consensus 293 ~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~ 371 (594)
T 2p1m_B 293 TLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGC 371 (594)
T ss_dssp EEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHC
T ss_pred EEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhc
Confidence 9999999977432 223568999999999987 3322222 334589999999954 34443222222 348
Q ss_pred CCCCEEeCCCCCCCCCCccccc-CCCCCCEEEcc--C----CcCCCCCCc-------ccCCCCCEEEeecCcCCCCCccc
Q 004413 166 QNLQTLDLSFNNLTGQIPRTLF-NIGSLNYLFLG--N----NSLSGTLPT-------QKSENLQNIDLSYNHLSGPFPSW 231 (755)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls--~----N~l~~~~p~-------~~~~~L~~L~Ls~N~l~g~ip~~ 231 (755)
++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++..... ...++|+.|+|++ .+++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 9999999999999876666665 58999999999 4 566532211 1247999999987 666554444
Q ss_pred cc----cccccccccccccc
Q 004413 232 VT----SNLQMNLVANNFTF 247 (755)
Q Consensus 232 ~~----~~~~l~l~~n~~~~ 247 (755)
+. ....|++++|.++.
T Consensus 451 l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSH
T ss_pred HHHhchhccEeeccCCCCcH
Confidence 43 23468999988754
No 239
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.37 E-value=1.3e-13 Score=147.86 Aligned_cols=89 Identities=22% Similarity=0.342 Sum_probs=63.3
Q ss_pred ccccchhhhh---cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAM---RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~---~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
.+|+|||.+. .+.++.++|||||||+++||+||+.|+......+ ......... ...... ..+ .
T Consensus 214 ~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~---~~~----~ 279 (348)
T 1u5q_A 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNE-SPALQS---GHW----S 279 (348)
T ss_dssp GGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCCC---TTS----C
T ss_pred cceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhcC-CCCCCC---CCC----C
Confidence 4699999985 5789999999999999999999999987544322 122222211 111111 112 2
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.+++..||+.+|++|||+.++++
T Consensus 280 ~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 280 EYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhh
Confidence 34667889999999999999999975
No 240
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.36 E-value=7.1e-14 Score=144.52 Aligned_cols=87 Identities=21% Similarity=0.200 Sum_probs=60.0
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+.+..+ +.++||||||++++||+||+.|++...... + ......+.. .+ +......
T Consensus 175 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~----~~~~~~~~~------~~---~~~~~~~ 238 (275)
T 2eue_A 175 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---L----FKNISNGVY------TL---PKFLSPG 238 (275)
T ss_dssp CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH---H----HHHHHHTCC------CC---CTTSCHH
T ss_pred cCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---H----HHHHHhCCC------CC---CccCCHH
Confidence 47999999987765 789999999999999999999997644221 1 111111211 11 1112235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|.+|||+.|+++
T Consensus 239 ~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 239 AAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhhcCHhHCCCHHHHhh
Confidence 678899999999999999999974
No 241
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.36 E-value=1.2e-13 Score=145.68 Aligned_cols=94 Identities=23% Similarity=0.304 Sum_probs=70.9
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+.+..++.++|||||||+++||+| |+.|+........ . ..+..+... ..+......+
T Consensus 217 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~----~~~~~~~~~--------~~~~~~~~~~ 281 (314)
T 2ivs_A 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL---F----NLLKTGHRM--------ERPDNCSEEM 281 (314)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---H----HHHHTTCCC--------CCCTTCCHHH
T ss_pred cccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---H----HHhhcCCcC--------CCCccCCHHH
Confidence 4999999999999999999999999999999 9999876544321 1 122222111 1112223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|++||++.||++.|+....
T Consensus 282 ~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 282 YRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 789999999999999999999999987543
No 242
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.36 E-value=5.5e-14 Score=150.47 Aligned_cols=87 Identities=21% Similarity=0.188 Sum_probs=61.8
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+.+..+ +.++||||+||+++||+||+.|++.....+ +. . .+..+.. .+ +......
T Consensus 173 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~---~~---~-~i~~~~~------~~---p~~~s~~ 236 (347)
T 3zgw_A 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA---LY---K-KIMRGKY------DV---PKWLSPS 236 (347)
T ss_dssp GGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---H-HHHHTCC------CC---CTTCCHH
T ss_pred cCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH---HH---H-HHHcCCC------CC---CCCCCHH
Confidence 46999999988775 899999999999999999999997643322 11 1 1122211 11 1111234
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.++...|++.+|.+|||+.|+++
T Consensus 237 ~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 237 SILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHcccCHhHCcCHHHHhc
Confidence 567899999999999999999985
No 243
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.36 E-value=8.1e-14 Score=158.32 Aligned_cols=89 Identities=20% Similarity=0.196 Sum_probs=60.6
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
+.|||||++.. ..|+.++|+||+||+|+||+||+.|+..........+.. ...... ..+ +......
T Consensus 354 p~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~----~i~~~~------~~~---p~~~S~~ 420 (689)
T 3v5w_A 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR----MTLTMA------VEL---PDSFSPE 420 (689)
T ss_dssp GGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHH----HHHHCC------CCC---CTTSCHH
T ss_pred cCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----hhcCCC------CCC---CccCCHH
Confidence 67999999975 479999999999999999999999997532222111111 111111 111 1111234
Q ss_pred HHHHHHHhcccCCCCCCC-----HHHHH
Q 004413 648 VIGVALLCTQASPMMRPP-----MSRVV 670 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPs-----m~~v~ 670 (755)
+.++...|++.||.+|++ +.||.
T Consensus 421 a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp HHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred HHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 667889999999999998 56664
No 244
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.36 E-value=8.8e-14 Score=148.29 Aligned_cols=95 Identities=23% Similarity=0.314 Sum_probs=71.5
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+.+..++.++|||||||+++||+| |+.|+......+ +... +..+... .. +......+
T Consensus 224 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----~~~~~~~-----~~---~~~~~~~l 288 (334)
T 2pvf_A 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKL----LKEGHRM-----DK---PANCTNEL 288 (334)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHH----HHHTCCC-----CC---CTTCCHHH
T ss_pred ceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH---HHHH----HhcCCCC-----CC---CccCCHHH
Confidence 5999999999999999999999999999999 999987654322 2221 2222111 11 12223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..||+.+|.+||++.||++.|+.....
T Consensus 289 ~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 7899999999999999999999999987654
No 245
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.36 E-value=1.6e-14 Score=155.72 Aligned_cols=102 Identities=21% Similarity=0.278 Sum_probs=65.8
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHH---------HHHhhcCccccccCC-CC-
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWA---------WNLHENNQSLGLVDP-TL- 637 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~d~-~l- 637 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+......+........ ....... ....++. .+
T Consensus 223 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~ 301 (360)
T 3llt_A 223 RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTN-GSKYVNKDELK 301 (360)
T ss_dssp GGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSG-GGGGEETTTTE
T ss_pred ccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhcc-CccccCcccce
Confidence 4699999999999999999999999999999999999765443322111111 0000000 0011110 00
Q ss_pred ---CC--CCHH---------------HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 ---TE--FNDK---------------EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ---~~--~~~~---------------~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+ .... +...+.+++..|++.+|.+|||+.||++
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 302 LAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp ECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0000 0145678999999999999999999864
No 246
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.36 E-value=1.4e-13 Score=146.14 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=65.6
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc---cccccC---------C
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ---SLGLVD---------P 635 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~d---------~ 635 (755)
.+|+|||.+.+ ..++.++|||||||+++||+||+.|+......+ ....+........ .....+ +
T Consensus 164 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (324)
T 3mtl_A 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKTYNYP 240 (324)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCC
T ss_pred ccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhhcccccc
Confidence 46999999876 678999999999999999999999998655433 2222222221100 000000 0
Q ss_pred CCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 636 TLT-----EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 636 ~l~-----~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
... .........+.++...|++.+|.+|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 000111235678999999999999999999975
No 247
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.36 E-value=6.4e-14 Score=148.89 Aligned_cols=87 Identities=18% Similarity=0.161 Sum_probs=63.1
Q ss_pred ccccchhhhhcCCCC-ccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLT-EKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t-~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+.+..++ .++||||+||+++||+||+.|++.....+ +. . .+..+.. .+ +......
T Consensus 177 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~---~-~i~~~~~------~~---p~~~s~~ 240 (328)
T 3fe3_A 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LR---E-RVLRGKY------RI---PFYMSTD 240 (328)
T ss_dssp GGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---H-HHHHCCC------CC---CTTSCHH
T ss_pred cceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH---HH---H-HHHhCCC------CC---CCCCCHH
Confidence 469999999988775 89999999999999999999997654322 11 1 1122211 11 1112235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.++...|++.+|.+|||+.|+++
T Consensus 241 ~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 241 CENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 667889999999999999999874
No 248
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.36 E-value=1.2e-13 Score=157.31 Aligned_cols=91 Identities=19% Similarity=0.159 Sum_probs=65.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+.+..|+.++||||+||+++||++|+.||......+. . ..+..+... .-++.....+ ..+
T Consensus 320 ~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~---~----~~i~~~~~~-~~~~~~~~~s----~~~ 387 (573)
T 3uto_A 320 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET---L----RNVKSCDWN-MDDSAFSGIS----EDG 387 (573)
T ss_dssp GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---H----HHHHTTCCC-CCSGGGTTSC----HHH
T ss_pred ccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---H----HHHHhCCCC-CCcccccCCC----HHH
Confidence 569999999999999999999999999999999999976543321 1 111222110 1011112222 345
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.||.+|||+.|+++
T Consensus 388 ~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 388 KDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 67888999999999999999976
No 249
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.35 E-value=1.7e-13 Score=144.31 Aligned_cols=99 Identities=14% Similarity=0.088 Sum_probs=66.5
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++||||||++++||+||+.|+...... .......... . .....+......+
T Consensus 199 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~-~-----~~~~~~~~~~~~l 265 (309)
T 2h34_A 199 LYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAI-P-----RPSTVRPGIPVAF 265 (309)
T ss_dssp GGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCC-C-----CGGGTSTTCCTHH
T ss_pred cCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCC-C-----CccccCCCCCHHH
Confidence 3599999999999999999999999999999999998754321 1112222111 0 0001111222357
Q ss_pred HHHHHHhcccCCCCCC-CHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRP-PMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RP-sm~~v~~~L~~~~~~~ 680 (755)
.+++..|++.+|++|| ++.++++.|+......
T Consensus 266 ~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 266 DAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 7899999999999999 9999999999866543
No 250
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.35 E-value=3.8e-13 Score=142.30 Aligned_cols=108 Identities=12% Similarity=0.080 Sum_probs=73.8
Q ss_pred ccccchhhhh--------cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhc---Ccccc---cc-
Q 004413 569 HGYLAPEYAM--------RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHEN---NQSLG---LV- 633 (755)
Q Consensus 569 ~gy~aPE~~~--------~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~---~~- 633 (755)
.+|+|||.+. ...++.++|||||||+++||+||+.|+........ ..+.+...... ..... ..
T Consensus 179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~ 256 (319)
T 4euu_A 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPSGAISGVQKAEN 256 (319)
T ss_dssp GGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHCCTTCCEEEECSTT
T ss_pred CCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCCCcccchhhhcccC
Confidence 5799999986 57899999999999999999999999864332211 11112222211 11100 00
Q ss_pred -----CCCC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 634 -----DPTL---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 634 -----d~~l---~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
++.+ ..........+..+...|++.||++|||+.|+++...+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 257 GPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 0111 23455667778889999999999999999999998876544
No 251
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.35 E-value=6.8e-14 Score=149.10 Aligned_cols=87 Identities=20% Similarity=0.211 Sum_probs=62.4
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+.+..+ +.++|||||||+++||+||+.|++.....+ +.+.+.......+......
T Consensus 171 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------------~~~~i~~~~~~~p~~~s~~ 234 (336)
T 3h4j_B 171 PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----------------LFKKVNSCVYVMPDFLSPG 234 (336)
T ss_dssp TTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----------------CBCCCCSSCCCCCTTSCHH
T ss_pred cCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----------------HHHHHHcCCCCCcccCCHH
Confidence 47999999987776 789999999999999999999987532211 1111111111112222345
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.++...|++.+|.+|||+.|+++
T Consensus 235 ~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 235 AQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHcCCChhHCcCHHHHHh
Confidence 678899999999999999999975
No 252
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.35 E-value=8.3e-14 Score=145.79 Aligned_cols=95 Identities=21% Similarity=0.316 Sum_probs=67.4
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhhCC-cCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIISGR-ANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllElltg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+.+..++.++||||||++++||+||+ .|+......+ +... ...+.. ... +......+
T Consensus 197 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~----~~~~~~--~~~------~~~~~~~l 261 (298)
T 3f66_A 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY----LLQGRR--LLQ------PEYCPDPL 261 (298)
T ss_dssp GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHH----HHTTCC--CCC------CTTCCHHH
T ss_pred cccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHH----HhcCCC--CCC------CccCCHHH
Confidence 599999999999999999999999999999955 4554332222 1111 111111 011 11122357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+++..|++.+|.+||++.|++++|+.....
T Consensus 262 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 262 YEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999886553
No 253
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.35 E-value=1.6e-13 Score=144.63 Aligned_cols=95 Identities=20% Similarity=0.364 Sum_probs=70.3
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+|+|||.+....++.++||||||++++||+| |+.|+........ + ......+.. +.. +......+
T Consensus 212 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~----~~~~~~~~~-----~~~---~~~~~~~l 277 (313)
T 1t46_A 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--F----YKMIKEGFR-----MLS---PEHAPAEM 277 (313)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--H----HHHHHHTCC-----CCC---CTTSCHHH
T ss_pred eeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--H----HHHhccCCC-----CCC---cccCCHHH
Confidence 5999999999999999999999999999999 9999875443221 1 111221110 111 11223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+++..|++.+|.+|||+.||+++|+....
T Consensus 278 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 788999999999999999999999987654
No 254
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.35 E-value=1.6e-13 Score=145.59 Aligned_cols=90 Identities=19% Similarity=0.275 Sum_probs=63.0
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||++....+ +.++|||||||+++||+||+.|++...... .....|... .. ..+ ... .....
T Consensus 171 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~----~~---~~~-~~~----~~~~~ 237 (323)
T 3tki_A 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEK----KT---YLN-PWK----KIDSA 237 (323)
T ss_dssp GGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHHHTT----CT---TST-TGG----GSCHH
T ss_pred cCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHHhcc----cc---cCC-ccc----cCCHH
Confidence 45999999988776 889999999999999999999997544321 222222211 00 000 011 12235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|++|||+.|+++
T Consensus 238 ~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 238 PLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHhh
Confidence 667899999999999999999864
No 255
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.35 E-value=3e-13 Score=140.42 Aligned_cols=91 Identities=14% Similarity=0.191 Sum_probs=65.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++||||||++++||+||+.|+....... +.. ....+.. ....+....++ ..+
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~----~~~~~~~-~~~~~~~~~~~----~~~ 238 (284)
T 3kk8_A 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---LYA----QIKAGAY-DYPSPEWDTVT----PEA 238 (284)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCC-CCCTTTTTTSC----HHH
T ss_pred cCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH---HHH----HHHhccc-cCCchhhcccC----HHH
Confidence 46999999999999999999999999999999999987654322 111 1111111 11111112222 356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++|||+.|+++
T Consensus 239 ~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 239 KSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHcccChhhCCCHHHHhc
Confidence 78899999999999999999985
No 256
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.35 E-value=3.3e-14 Score=150.06 Aligned_cols=90 Identities=18% Similarity=0.297 Sum_probs=62.5
Q ss_pred ccccchhhhhc-----------CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC
Q 004413 569 HGYLAPEYAMR-----------GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL 637 (755)
Q Consensus 569 ~gy~aPE~~~~-----------~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 637 (755)
.+|+|||.+.. ..++.++|||||||+++||+||+.|+....... ........... ....
T Consensus 192 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~-----~~~~ 261 (313)
T 3cek_A 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNH-----EIEF 261 (313)
T ss_dssp GGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHCTTS-----CCCC
T ss_pred CCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-----HHHHHHHhccc-----ccCC
Confidence 46999999875 578999999999999999999999987543221 11111111111 0111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+......+.+++..|++.+|.+||++.||++
T Consensus 262 ---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 262 ---PDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ---CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---cccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111345677889999999999999999985
No 257
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.35 E-value=2.1e-13 Score=143.88 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=64.7
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCcc----------------cc
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQS----------------LG 631 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~----------------~~ 631 (755)
..|+|||.+.+ ..++.++|||||||+++||+||+.|+......+. ...+......... ..
T Consensus 183 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (311)
T 3niz_A 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPLWKQRTFQ 259 (311)
T ss_dssp CTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCC
T ss_pred CCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccchhhhcccc
Confidence 45999999876 5689999999999999999999999976544332 1111111111000 00
Q ss_pred ccCCCC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 632 LVDPTL-TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 632 ~~d~~l-~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+... .........++.++...|++.+|.+|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 001000 0001112245778999999999999999999975
No 258
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.34 E-value=1.7e-13 Score=141.92 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=67.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++||||||++++||+||+.|+......+ +.. .+.++.... + +......+
T Consensus 180 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~----~i~~~~~~~-----~---~~~~~~~l 244 (279)
T 2w5a_A 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAG----KIREGKFRR-----I---PYRYSDEL 244 (279)
T ss_dssp CTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCCCC-----C---CTTSCHHH
T ss_pred ccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH---HHH----HHhhccccc-----C---CcccCHHH
Confidence 46999999999999999999999999999999999987654321 221 222232211 1 11223467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAG 675 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~ 675 (755)
.+++..|++.+|.+||++.||++.+..
T Consensus 245 ~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 245 NEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred HHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 789999999999999999999876543
No 259
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.34 E-value=3.7e-13 Score=148.56 Aligned_cols=42 Identities=21% Similarity=0.302 Sum_probs=38.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCch
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLD 610 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~ 610 (755)
..|+|||++.+..++.++|||||||+++||+||+.|+.....
T Consensus 263 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp GGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 469999999999999999999999999999999999876543
No 260
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.34 E-value=2.1e-14 Score=150.62 Aligned_cols=98 Identities=17% Similarity=0.230 Sum_probs=67.6
Q ss_pred ccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh--------HHHHHHHHHHHhhcCccccccCCCCCCCCH
Q 004413 571 YLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME--------KIYLLEWAWNLHENNQSLGLVDPTLTEFND 642 (755)
Q Consensus 571 y~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 642 (755)
|+|||.+.+..++.++||||||++++||+||+.|........ .......+...+..+... ..+.
T Consensus 195 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 266 (302)
T 4e5w_A 195 WYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL--------PCPP 266 (302)
T ss_dssp GCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCC--------CCCT
T ss_pred ccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCC--------CCCC
Confidence 999999999999999999999999999999998854211000 000011111122221111 1122
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcc
Q 004413 643 KEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 676 (755)
Q Consensus 643 ~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~ 676 (755)
.....+.+++..|++.+|.+|||+.||+++|+..
T Consensus 267 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 267 NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 2334678899999999999999999999999864
No 261
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.34 E-value=4.4e-13 Score=139.00 Aligned_cols=92 Identities=13% Similarity=0.164 Sum_probs=67.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++||||||++++||+||+.|+.. .. .+ ......+.... .++ ..+
T Consensus 185 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~-----~~---~~-~~~~~~~~~~~-------~~~----~~~ 244 (284)
T 2a19_B 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE-----TS---KF-FTDLRDGIISD-------IFD----KKE 244 (284)
T ss_dssp CTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH-----HH---HH-HHHHHTTCCCT-------TSC----HHH
T ss_pred ccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh-----HH---HH-HHHhhcccccc-------cCC----HHH
Confidence 479999999999999999999999999999999988531 11 11 11122222111 122 246
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+++..|++.+|.+||++.|+++.|+.....+
T Consensus 245 ~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 245 KTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 67889999999999999999999998765543
No 262
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.34 E-value=7.6e-14 Score=148.22 Aligned_cols=97 Identities=16% Similarity=0.093 Sum_probs=53.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++|||||||+++||+||+.|+..........-...+...+..+... .+. +........+
T Consensus 173 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~--~~~---~~~~~~s~~~ 247 (325)
T 3kn6_A 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS--FEG---EAWKNVSQEA 247 (325)
T ss_dssp -----------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC--CCS---HHHHTSCHHH
T ss_pred cCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC--CCc---ccccCCCHHH
Confidence 46999999999999999999999999999999999987533211000111122222222211 000 0001123457
Q ss_pred HHHHHHhcccCCCCCCCHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVV 670 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~ 670 (755)
.++...|++.+|.+|||+.|++
T Consensus 248 ~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 248 KDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp HHHHHHHHCCCTTTCCCTTTST
T ss_pred HHHHHHHCCCChhHCCCHHHHh
Confidence 7899999999999999999886
No 263
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.34 E-value=1.3e-13 Score=146.51 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=70.1
Q ss_pred cccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh---------HHHHHHHHHHHhhcCccccccCCCCCCC
Q 004413 570 GYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME---------KIYLLEWAWNLHENNQSLGLVDPTLTEF 640 (755)
Q Consensus 570 gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 640 (755)
.|+|||.+.+..++.++||||||++++||+||+.|+......- .......+...+..+... ..
T Consensus 213 ~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 284 (326)
T 2w1i_A 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL--------PR 284 (326)
T ss_dssp GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC--------CC
T ss_pred eEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCC--------CC
Confidence 3999999999999999999999999999999998865321000 011111222222222111 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 641 NDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 641 ~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
+......+.+++..||+.+|++||++.||++.|+...+
T Consensus 285 ~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 285 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22234567889999999999999999999999987543
No 264
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.34 E-value=8.3e-13 Score=139.05 Aligned_cols=103 Identities=19% Similarity=0.287 Sum_probs=65.9
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHH--------HHHhhcCc-cc--cccCCC
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWA--------WNLHENNQ-SL--GLVDPT 636 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~--------~~~~~~~~-~~--~~~d~~ 636 (755)
.+|+|||.+.+ ..++.++|||||||+++||+||+.|+......+........ ...+.... .. .+-++.
T Consensus 166 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T 4agu_A 166 RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPE 245 (311)
T ss_dssp GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCS
T ss_pred ccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCcc
Confidence 46999999876 67899999999999999999999999766543322211110 01111110 00 111111
Q ss_pred CC-C---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 637 LT-E---FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 637 l~-~---~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
-. . ........+.+++..|++.+|.+|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 246 DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp SCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0 00112345778999999999999999999985
No 265
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.33 E-value=2.4e-13 Score=141.41 Aligned_cols=89 Identities=19% Similarity=0.189 Sum_probs=61.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+. +.++.++||||||++++||+||+.|+......+. .... .. .... ........ ...+
T Consensus 190 ~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~---~~~~---~~-~~~~--~~~~~~~~----~~~~ 255 (285)
T 3is5_A 190 ALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV---QQKA---TY-KEPN--YAVECRPL----TPQA 255 (285)
T ss_dssp GGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHH---HH-CCCC--CCC--CCC----CHHH
T ss_pred cCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH---Hhhh---cc-CCcc--cccccCcC----CHHH
Confidence 4699999875 6789999999999999999999999976543221 1111 11 1000 00000112 2356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++|||+.||++
T Consensus 256 ~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 256 VDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 68899999999999999999974
No 266
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.33 E-value=1.1e-13 Score=145.26 Aligned_cols=88 Identities=24% Similarity=0.403 Sum_probs=64.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++||||||++++||+||+.|+....... .... ...+.. +.+. ......+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~----~~~~~~-----~~~~---~~~~~~l 247 (303)
T 3a7i_A 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---VLFL----IPKNNP-----PTLE---GNYSKPL 247 (303)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHH----HHHSCC-----CCCC---SSCCHHH
T ss_pred cCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH---HHHH----hhcCCC-----CCCc---cccCHHH
Confidence 35999999999999999999999999999999999987654322 1111 111111 1111 1112357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|.+|||+.||++
T Consensus 248 ~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 248 KEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHcCCChhhCcCHHHHhh
Confidence 78999999999999999999975
No 267
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.33 E-value=6.6e-12 Score=119.74 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=84.3
Q ss_pred CeEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCC
Q 004413 1 MLLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDA 80 (755)
Q Consensus 1 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 80 (755)
++|++++|+|+ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 46788888887 4666553 78888888888888777778888888888888888888776667788888888888888
Q ss_pred CCCCCcchhhcCCCCCcEEEccCCCCCC
Q 004413 81 PFTGKIPDFIGNWTKLKSLRFQGNSFQG 108 (755)
Q Consensus 81 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 108 (755)
++++..+..|.++++|++|+|++|.+..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 8886666678888888888888888874
No 268
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.33 E-value=1.1e-13 Score=146.80 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=65.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~ 647 (755)
+.|+|||.+....++.++|||||||+++||+||+.|+......+ +. ..... +... .++.. ... ...
T Consensus 167 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~---~~i~~-~~~~--~~~~~~~~~----s~~ 233 (321)
T 1tki_A 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---II---ENIMN-AEYT--FDEEAFKEI----SIE 233 (321)
T ss_dssp GGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH---HHHHH-TCCC--CCHHHHTTS----CHH
T ss_pred hhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH---HH---HHHHc-CCCC--CChhhhccC----CHH
Confidence 57999999999889999999999999999999999997654322 11 11111 1110 00000 111 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.++...|++.+|.+|||+.|+++
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 778999999999999999999986
No 269
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.33 E-value=3.2e-13 Score=140.98 Aligned_cols=101 Identities=15% Similarity=0.126 Sum_probs=63.8
Q ss_pred ccccchhhhhcCC-CCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc------cccccC-------
Q 004413 569 HGYLAPEYAMRGH-LTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ------SLGLVD------- 634 (755)
Q Consensus 569 ~gy~aPE~~~~~~-~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~d------- 634 (755)
..|+|||.+.+.. ++.++|||||||+++||+||+.|+....... .....+........ ..+..+
T Consensus 165 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (292)
T 3o0g_A 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242 (292)
T ss_dssp GGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH--HHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred cCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCCChhhhhhhcccccccccccc
Confidence 4599999998766 8999999999999999999998865433221 12222222211100 000000
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 635 ---PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 635 ---~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+..........+.++...|++.+|++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0001111223345678999999999999999999974
No 270
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.33 E-value=4e-13 Score=139.94 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=64.9
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCcc--------ccccCCCCC-
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQS--------LGLVDPTLT- 638 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~--------~~~~d~~l~- 638 (755)
..|+|||.+.+ ..++.++|||||||+++||+||+.|+......+. ...+......... ....++...
T Consensus 164 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T 1ob3_A 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240 (288)
T ss_dssp CTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred ccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhccccccccccc
Confidence 46999999876 4689999999999999999999999976543221 1112221111000 001111110
Q ss_pred -------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 639 -------EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 639 -------~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.........+.++...|++.+|++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011112345678999999999999999999874
No 271
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.32 E-value=2.5e-13 Score=143.23 Aligned_cols=95 Identities=20% Similarity=0.278 Sum_probs=65.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+......+ ............ +. .........+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~----~~--~~~~~~~~~l 250 (311)
T 3ork_A 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIP----PS--ARHEGLSADL 250 (311)
T ss_dssp CTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCC----HH--HHSTTCCHHH
T ss_pred cccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCCC----cc--cccCCCCHHH
Confidence 46999999999999999999999999999999999997654322 122222221110 00 0001123457
Q ss_pred HHHHHHhcccCCCCCCCHHHHH-HHHhc
Q 004413 649 IGVALLCTQASPMMRPPMSRVV-AMLAG 675 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~-~~L~~ 675 (755)
.+++..|++.+|++||++.+++ ..+..
T Consensus 251 ~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 251 DAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp HHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 7889999999999999776665 44444
No 272
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.32 E-value=3.3e-13 Score=145.50 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=65.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++|||||||+++||+||+.|+......+ +.. .+..+... ...+....+ ...+
T Consensus 194 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---~~~----~i~~~~~~-~~~~~~~~~----~~~~ 261 (362)
T 2bdw_A 194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---LYA----QIKAGAYD-YPSPEWDTV----TPEA 261 (362)
T ss_dssp TTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCCC-CCTTGGGGS----CHHH
T ss_pred ccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHH----HHHhCCCC-CCcccccCC----CHHH
Confidence 46999999999999999999999999999999999987543321 111 12222111 111111122 2356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|++||++.|+++
T Consensus 262 ~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 262 KSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHcCCChhhCcCHHHHhc
Confidence 78899999999999999999975
No 273
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.32 E-value=5.4e-13 Score=141.95 Aligned_cols=101 Identities=22% Similarity=0.298 Sum_probs=66.2
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHH----------HHHhhc-CccccccCCC
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWA----------WNLHEN-NQSLGLVDPT 636 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~----------~~~~~~-~~~~~~~d~~ 636 (755)
.+|+|||.+.+. .++.++|||||||+++||+||+.|+......+.. ...+ ...+.. ........+.
T Consensus 188 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (331)
T 4aaa_A 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL--YHIMMCLGNLIPRHQELFNKNPVFAGVRLPE 265 (331)
T ss_dssp CTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCSCCHHHHHHHHHCGGGTTCCCCC
T ss_pred ccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH--HHHHHHhCCCChhhhhHhhhccccccccCcc
Confidence 459999998875 7899999999999999999999999765443221 1111 111111 1111111122
Q ss_pred CCC-CC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 637 LTE-FN-----DKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 637 l~~-~~-----~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.. .+ ......+.+++..|++.+|++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 266 IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 211 11 122456888999999999999999999874
No 274
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.32 E-value=5.9e-13 Score=138.95 Aligned_cols=90 Identities=19% Similarity=0.337 Sum_probs=62.1
Q ss_pred ccccchhhhhcCC--CCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 569 HGYLAPEYAMRGH--LTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 569 ~gy~aPE~~~~~~--~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
.+|+|||.+..+. ++.++||||||++++||+||+.|+........ ..+..... -..+.+ +.....
T Consensus 187 ~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~-------~~~~~~---~~~~~~ 253 (295)
T 2clq_A 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---AMFKVGMF-------KVHPEI---PESMSA 253 (295)
T ss_dssp GGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---HHHHHHHH-------CCCCCC---CTTSCH
T ss_pred ccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---HHHhhccc-------cccccc---cccCCH
Confidence 4699999987654 89999999999999999999999864322211 11111111 011222 112234
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+.+++..|++.+|++||++.|+++
T Consensus 254 ~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 254 EAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 5678899999999999999999974
No 275
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.32 E-value=2.8e-13 Score=147.25 Aligned_cols=90 Identities=18% Similarity=0.181 Sum_probs=65.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~ 647 (755)
.+|+|||++....++.++|||||||+++||+||+.|+......+ ....+ ..+.. ..++.. ... ...
T Consensus 214 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~i----~~~~~--~~~~~~~~~~----s~~ 280 (387)
T 1kob_A 214 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---TLQNV----KRCDW--EFDEDAFSSV----SPE 280 (387)
T ss_dssp GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHH----HHCCC--CCCSSTTTTS----CHH
T ss_pred CCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH---HHHHH----HhCCC--CCCccccccC----CHH
Confidence 46999999999999999999999999999999999997644322 11111 11111 111111 222 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|.+|||+.|+++
T Consensus 281 ~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 281 AKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhh
Confidence 678999999999999999999975
No 276
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.31 E-value=1.5e-12 Score=140.86 Aligned_cols=103 Identities=18% Similarity=0.169 Sum_probs=66.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHH-HH---------------HHHHHHhhcCc----
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIY-LL---------------EWAWNLHENNQ---- 628 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~-l~---------------~~~~~~~~~~~---- 628 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+......+... +. ..+........
T Consensus 190 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (371)
T 2xrw_A 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 269 (371)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCC
T ss_pred CCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccc
Confidence 46999999999999999999999999999999999997654322110 00 00000010000
Q ss_pred --cccccC----CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 629 --SLGLVD----PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 629 --~~~~~d----~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.+. +...+........+.++...|++.+|.+|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 270 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000 0000011223557888999999999999999999986
No 277
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.31 E-value=4.9e-13 Score=144.17 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=64.6
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc-----------cccccCCC
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ-----------SLGLVDPT 636 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~~d~~ 636 (755)
..|+|||.+.. ..++.++|||||||+++||+||+.|+......+.. ..+........ ..+.+...
T Consensus 197 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T 3pg1_A 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL---NKIVEVVGTPKIEDVVMFSSPSARDYLRNS 273 (362)
T ss_dssp GGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCHHHHHHTSCHHHHHHTTTC
T ss_pred ceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCChHHhhhccchhhhHHHHhh
Confidence 35999999876 78999999999999999999999999765432211 11111100000 00000000
Q ss_pred C--------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 637 L--------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 637 l--------~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+ ..........+.+++..|++.+|.+|||+.|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 274 LSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1 0011122345778999999999999999999975
No 278
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.31 E-value=2.8e-13 Score=140.76 Aligned_cols=87 Identities=22% Similarity=0.205 Sum_probs=64.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++||||||++++||+||+.|++.....+. ... +... +..+ +......+
T Consensus 176 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~-~~~~------~~~~---~~~~~~~~ 239 (284)
T 2vgo_A 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET------HRR-IVNV------DLKF---PPFLSDGS 239 (284)
T ss_dssp GGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHH-HHTT------CCCC---CTTSCHHH
T ss_pred CCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH------HHH-Hhcc------ccCC---CCcCCHHH
Confidence 469999999999999999999999999999999999976543221 111 1111 1111 11122356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|.+||++.|+++
T Consensus 240 ~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 240 KDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhhcCHhhCCCHHHHhh
Confidence 78899999999999999999985
No 279
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.31 E-value=9.4e-13 Score=141.84 Aligned_cols=103 Identities=16% Similarity=0.254 Sum_probs=64.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHH---------HHHHhhcCc-----------
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEW---------AWNLHENNQ----------- 628 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~---------~~~~~~~~~----------- 628 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+......+....... .......+.
T Consensus 194 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (360)
T 3eqc_A 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRP 273 (360)
T ss_dssp CTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------
T ss_pred CCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCC
Confidence 469999999999999999999999999999999999976543321111000 000000000
Q ss_pred ---ccccc----CCCCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 629 ---SLGLV----DPTLTEFN-DKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 629 ---~~~~~----d~~l~~~~-~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.+ .......+ ......+.+++..|++.+|++|||+.|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 274 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000 00000000 011235778899999999999999999985
No 280
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.31 E-value=2.2e-13 Score=144.67 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=64.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++|||||||+++||+||+.|+......+. .. .. ..... .. .+.. .......+
T Consensus 181 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~---~~-~~~~~-~~-~~~~---~~~~~~~~ 248 (326)
T 2y0a_A 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LA---NV-SAVNY-EF-EDEY---FSNTSALA 248 (326)
T ss_dssp TTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HH---HH-HHTCC-CC-CHHH---HTTSCHHH
T ss_pred cCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HH---HH-HhcCC-Cc-Cccc---cccCCHHH
Confidence 469999999999999999999999999999999999876443221 11 11 11110 00 0000 01112356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|.+|||+.|+++
T Consensus 249 ~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 249 KDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHhc
Confidence 77899999999999999999986
No 281
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.31 E-value=1.2e-13 Score=146.01 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=65.5
Q ss_pred cccchhhhhcCC---CCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 570 GYLAPEYAMRGH---LTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 570 gy~aPE~~~~~~---~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
+|+|||.+.... ++.++|||||||+++||+||+.|++....... .+. ...... .. -+....+ ..
T Consensus 208 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~----~~~~~~-~~---~~~~~~~----~~ 274 (317)
T 2buj_A 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVA----LAVQNQ-LS---IPQSPRH----SS 274 (317)
T ss_dssp GGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHH----HHHHCC------CCCCTTS----CH
T ss_pred ccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhh----HHhhcc-CC---CCccccC----CH
Confidence 499999887543 78999999999999999999999753111100 011 111110 00 0111112 34
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
.+.+++..|++.+|.+||++.+|++.|+....
T Consensus 275 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 275 ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 67789999999999999999999999987654
No 282
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.31 E-value=3.5e-13 Score=143.94 Aligned_cols=90 Identities=21% Similarity=0.288 Sum_probs=63.0
Q ss_pred ccccchhhhh----cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 004413 569 HGYLAPEYAM----RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 644 (755)
Q Consensus 569 ~gy~aPE~~~----~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 644 (755)
.+|+|||.+. ...++.++|||||||++|||+||+.|++...... .. ......... +.+. ....
T Consensus 217 ~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-~~----~~~~~~~~~------~~~~--~~~~ 283 (340)
T 3an0_A 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQ----LKQVVEEPS------PQLP--ADKF 283 (340)
T ss_dssp CCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-HH----HHHHHHSCC------CCCC--GGGS
T ss_pred ccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH-HH----HHHHhcCCC------CCCC--cccC
Confidence 4699999964 4578999999999999999999999997543211 11 112222111 1110 0112
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 645 ALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 645 ~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+.+++..|++.+|++||++.||++
T Consensus 284 ~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 284 SAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 346788999999999999999999975
No 283
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.31 E-value=3.3e-13 Score=143.94 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=60.9
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+.+..+ +.++|||||||+++||+||+.|+..... ...... ..+......
T Consensus 193 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------------------~~~~~~-~~~~~~~~~ 250 (335)
T 3dls_A 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------------------TVEAAI-HPPYLVSKE 250 (335)
T ss_dssp GGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------------------GTTTCC-CCSSCCCHH
T ss_pred ccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------------------HHhhcc-CCCcccCHH
Confidence 47999999988777 8899999999999999999999864211 011111 001112235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|++|||+.|+++
T Consensus 251 l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 251 LMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 778889999999999999999986
No 284
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.31 E-value=1.6e-12 Score=143.00 Aligned_cols=101 Identities=20% Similarity=0.190 Sum_probs=67.3
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHH-------hh--cCccccccCCCCC
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNL-------HE--NNQSLGLVDPTLT 638 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~-------~~--~~~~~~~~d~~l~ 638 (755)
..|+|||++.+. .++.++|||||||+++||+||+.|+......+ .+.+.+... +. .....+..-+.+.
T Consensus 220 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~ 297 (420)
T 1j1b_A 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 297 (420)
T ss_dssp TTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCC
T ss_pred CCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChhhhhhccCccC
Confidence 459999998764 79999999999999999999999997654322 222222211 10 1111111122221
Q ss_pred CCCH------HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 639 EFND------KEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 639 ~~~~------~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+. .....+.++...|++.+|.+||++.|+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 298 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1111 22356788999999999999999999985
No 285
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.30 E-value=2.9e-13 Score=146.48 Aligned_cols=91 Identities=20% Similarity=0.166 Sum_probs=65.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||++....++.++|||||||+++||+||+.|+......+. ......... ...++....+ ...+
T Consensus 252 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------~~~i~~~~~--~~~~~~~~~~----~~~~ 319 (373)
T 2x4f_A 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET------LNNILACRW--DLEDEEFQDI----SEEA 319 (373)
T ss_dssp CTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHHTCC--CSCSGGGTTS----CHHH
T ss_pred CcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhccC--CCChhhhccC----CHHH
Confidence 469999999999999999999999999999999999976543221 111111110 0111111122 2356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|.+||++.|+++
T Consensus 320 ~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 320 KEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHhc
Confidence 78899999999999999999986
No 286
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.30 E-value=1.1e-11 Score=118.57 Aligned_cols=103 Identities=21% Similarity=0.277 Sum_probs=78.7
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 5778888875 5666554 688888888888887777778888888888888888876655667788888888888888
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCC
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQ 107 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~ 107 (755)
+++..+..|..+++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 88555555777888888888888776
No 287
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.30 E-value=2.7e-13 Score=144.53 Aligned_cols=87 Identities=18% Similarity=0.181 Sum_probs=63.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+....... +. ..... +.. .+ +......+
T Consensus 169 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~---~~i~~-~~~------~~---p~~~s~~~ 232 (337)
T 1o6l_A 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER---LF---ELILM-EEI------RF---PRTLSPEA 232 (337)
T ss_dssp GGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HHHHH-CCC------CC---CTTSCHHH
T ss_pred hhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH---HH---HHHHc-CCC------CC---CCCCCHHH
Confidence 56999999999999999999999999999999999987643322 11 11111 111 11 11122356
Q ss_pred HHHHHHhcccCCCCCC-----CHHHHHH
Q 004413 649 IGVALLCTQASPMMRP-----PMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RP-----sm~~v~~ 671 (755)
.++...|++.+|.+|| ++.||.+
T Consensus 233 ~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 233 KSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 7788899999999999 8888864
No 288
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.30 E-value=3.6e-13 Score=143.06 Aligned_cols=92 Identities=21% Similarity=0.309 Sum_probs=51.3
Q ss_pred ccccchhhh----hcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCC-CCCHH
Q 004413 569 HGYLAPEYA----MRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLT-EFNDK 643 (755)
Q Consensus 569 ~gy~aPE~~----~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~ 643 (755)
.+|+|||.+ ....++.++|||||||+++||+||+.|+....... +..... ..+. .+.+. .....
T Consensus 189 ~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~-~~~~-----~~~~~~~~~~~ 257 (327)
T 3aln_A 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQLTQV-VKGD-----PPQLSNSEERE 257 (327)
T ss_dssp -----------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCC-CCSC-----CCCCCCCSSCC
T ss_pred ccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHHHHH-hcCC-----CCCCCCccccc
Confidence 459999998 56779999999999999999999999987532110 000000 0011 11111 11112
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 644 EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 644 ~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
....+.+++..|++.+|++||++.||++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 2346778999999999999999999974
No 289
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.30 E-value=1.1e-13 Score=147.23 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=57.3
Q ss_pred cccchhhh---hcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 570 GYLAPEYA---MRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 570 gy~aPE~~---~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
.|+|||.+ ....++.++|||||||+++||+||+.|+....... ... +... .+..... ..
T Consensus 215 ~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~-----~~~~---~~~~~~~----~~ 276 (337)
T 3ll6_A 215 MYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------IVN-----GKYS---IPPHDTQ----YT 276 (337)
T ss_dssp ---------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------------CC---CCTTCCS----SG
T ss_pred CcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------hhc-----Cccc---CCccccc----ch
Confidence 49999998 57788999999999999999999999986422110 000 0000 0000111 12
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
.+.+++..|++.+|.+||++.|+++.|+......
T Consensus 277 ~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 277 VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 3667899999999999999999999998876543
No 290
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.30 E-value=4.8e-13 Score=144.99 Aligned_cols=89 Identities=18% Similarity=0.202 Sum_probs=61.5
Q ss_pred ccccchhhhhc---CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAMR---GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~~---~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
.+|+|||++.. ..++.++|||||||+++||+||+.|+..........+..... ... ..++....
T Consensus 178 ~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~----~~~---------~~~p~~~s 244 (384)
T 4fr4_A 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE----TTV---------VTYPSAWS 244 (384)
T ss_dssp GGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH----HCC---------CCCCTTSC
T ss_pred ccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh----hcc---------cCCCCcCC
Confidence 46999999864 458999999999999999999999997543322222222111 111 01122223
Q ss_pred HHHHHHHHHhcccCCCCCCC-HHHHH
Q 004413 646 LRVIGVALLCTQASPMMRPP-MSRVV 670 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPs-m~~v~ 670 (755)
..+..++..|++.+|.+||+ +.+|.
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 46778899999999999998 66665
No 291
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.30 E-value=2.3e-13 Score=140.85 Aligned_cols=87 Identities=21% Similarity=0.256 Sum_probs=48.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++||||||++++||+||+.|+......+. . ..+..... ..+......+
T Consensus 176 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~---------~~~~~~~~-~~~~~~~~~~ 239 (278)
T 3cok_A 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------L---------NKVVLADY-EMPSFLSIEA 239 (278)
T ss_dssp ----------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSCC-CCCTTSCHHH
T ss_pred CCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------H---------HHHhhccc-CCccccCHHH
Confidence 469999999999999999999999999999999999875432211 0 00111111 1111123356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++||++.+|++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHcccCHhhCCCHHHHhc
Confidence 78999999999999999999874
No 292
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.30 E-value=3.4e-13 Score=140.43 Aligned_cols=90 Identities=22% Similarity=0.307 Sum_probs=61.6
Q ss_pred ccccchhhh----hcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 004413 569 HGYLAPEYA----MRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 644 (755)
Q Consensus 569 ~gy~aPE~~----~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 644 (755)
.+|+|||.+ ....++.++|||||||+++||+||+.|++...... ..+ ........ +... ....
T Consensus 173 ~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~----~~~~~~~~------~~~~--~~~~ 239 (290)
T 3fme_A 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQL----KQVVEEPS------PQLP--ADKF 239 (290)
T ss_dssp CCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-HHH----HHHHHSCC------CCCC--TTTS
T ss_pred ccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-HHH----HHHhccCC------CCcc--cccC
Confidence 569999996 56789999999999999999999999987533221 111 11122111 1110 0112
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 645 ALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 645 ~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+.+++..|++.+|++|||+.||++
T Consensus 240 ~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 240 SAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 235778899999999999999999975
No 293
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.30 E-value=6.2e-13 Score=140.61 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=64.3
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc--c----c--cccCCCCCC
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ--S----L--GLVDPTLTE 639 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~--~----~--~~~d~~l~~ 639 (755)
..|+|||.+.+ ..++.++|||||||+++||+||+.|+......+. ...+........ . . ...++.+..
T Consensus 172 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (317)
T 2pmi_A 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ---LKLIFDIMGTPNESLWPSVTKLPKYNPNIQQ 248 (317)
T ss_dssp CTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCTTTCGGGGGCTTCCTTCCC
T ss_pred ccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChhHhhhhhhhhhccccccc
Confidence 46999999876 4689999999999999999999999976544322 222222111000 0 0 000111100
Q ss_pred -------------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 640 -------------FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 640 -------------~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
........+.++...|++.+|++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 249 RPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00011235778999999999999999999864
No 294
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.29 E-value=2.3e-13 Score=145.44 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=65.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++|||||||+++||+||+.|+..........+. ..+..+... . ... ........+
T Consensus 184 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~----~~i~~~~~~-~-~~~---~~~~~s~~~ 254 (342)
T 2qr7_A 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL----ARIGSGKFS-L-SGG---YWNSVSDTA 254 (342)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH----HHHHHCCCC-C-CST---TTTTSCHHH
T ss_pred ccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH----HHHccCCcc-c-Ccc---ccccCCHHH
Confidence 4699999998888999999999999999999999999753322222222 222222211 1 111 111122356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|++||++.||++
T Consensus 255 ~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 255 KDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHCCCChhHCcCHHHHhc
Confidence 77889999999999999999975
No 295
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.29 E-value=5.3e-13 Score=142.11 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=68.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHH-----HhhcCccccccC---------
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWN-----LHENNQSLGLVD--------- 634 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~d--------- 634 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+......+.......... .+.........+
T Consensus 198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 277 (339)
T 1z57_A 198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEH 277 (339)
T ss_dssp GGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTT
T ss_pred ccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccccccc
Confidence 579999999999999999999999999999999999976554332221111100 000000000000
Q ss_pred -----------CCC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 635 -----------PTL---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 635 -----------~~l---~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+ ......+...+.+++..|++.+|.+|||+.||++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 278 SSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp SHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 000 1123345677889999999999999999999974
No 296
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.29 E-value=6.4e-13 Score=140.89 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=66.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc---cc-c------cc----C
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ---SL-G------LV----D 634 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~-~------~~----d 634 (755)
.+|+|||.+....++.++|||||||+++||+||+.|+......+ ....+........ .. . .+ .
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 1blx_A 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259 (326)
T ss_dssp CTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred cceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCcccCccccccchhhhcccCc
Confidence 46999999999999999999999999999999999997654322 1222222111000 00 0 00 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 635 PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 635 ~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+..........+.+++..|++.+|++||++.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0111111222345778999999999999999999974
No 297
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.29 E-value=6.8e-13 Score=138.99 Aligned_cols=91 Identities=24% Similarity=0.402 Sum_probs=62.8
Q ss_pred cccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCcccc----ccCCCC-CCCCHH
Q 004413 570 GYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLG----LVDPTL-TEFNDK 643 (755)
Q Consensus 570 gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~d~~l-~~~~~~ 643 (755)
+|+|||.+.. ..++.++||||||++++||+||+.|+......... ..... +.... ..++.. ..+
T Consensus 191 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~--- 260 (303)
T 2vwi_A 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL------MLTLQ-NDPPSLETGVQDKEMLKKY--- 260 (303)
T ss_dssp TTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH------HHHHT-SSCCCTTC-----CCCCCC---
T ss_pred cccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH------HHHhc-cCCCccccccccchhhhhh---
Confidence 4999999876 57899999999999999999999998765443211 11111 11111 111111 122
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 644 EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 644 ~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+.+++..|++.+|.+||++.|+++
T Consensus 261 -~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 261 -GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 235778899999999999999999975
No 298
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.28 E-value=2.9e-13 Score=145.67 Aligned_cols=90 Identities=18% Similarity=0.128 Sum_probs=64.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~ 647 (755)
++|+|||.+....++.++|||||||+++||+||+.|+......+ +. .. +..+... +++.. ... ...
T Consensus 182 ~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~---~~---~~-i~~~~~~--~~~~~~~~~----s~~ 248 (361)
T 2yab_A 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TL---AN-ITAVSYD--FDEEFFSQT----SEL 248 (361)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HH---HH-HHTTCCC--CCHHHHTTS----CHH
T ss_pred ccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HH---HH-HHhcCCC--CCchhccCC----CHH
Confidence 56999999999999999999999999999999999997654322 11 11 1111110 11100 111 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.++...|++.+|.+|||+.|+++
T Consensus 249 ~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 249 AKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 667889999999999999999874
No 299
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.28 E-value=7.6e-13 Score=138.89 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=62.3
Q ss_pred ccccchhhhhcCC--CCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 569 HGYLAPEYAMRGH--LTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 569 ~gy~aPE~~~~~~--~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
..|+|||...... .+.++||||||++++||+||+.|+......+ + ...+..+.. .+ +.....
T Consensus 175 ~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~----~~~i~~~~~------~~---~~~~~~ 238 (305)
T 2wtk_C 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK---L----FENIGKGSY------AI---PGDCGP 238 (305)
T ss_dssp GGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---H----HHHHHHCCC------CC---CSSSCH
T ss_pred CCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH---H----HHHHhcCCC------CC---CCccCH
Confidence 4699999987643 4789999999999999999999987643221 1 111222211 11 112233
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+.+++..|++.+|.+||++.|+++
T Consensus 239 ~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 239 PLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 5678899999999999999999985
No 300
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.28 E-value=1.1e-12 Score=137.57 Aligned_cols=90 Identities=18% Similarity=0.269 Sum_probs=63.2
Q ss_pred ccccchhhhh-----cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 004413 569 HGYLAPEYAM-----RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 643 (755)
Q Consensus 569 ~gy~aPE~~~-----~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 643 (755)
..|+|||.+. ...++.++||||||++++||+||+.|+....... ....... +...... .+..
T Consensus 181 ~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~-~~~~~~~------~~~~ 247 (302)
T 2j7t_A 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAK-SDPPTLL------TPSK 247 (302)
T ss_dssp GGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHH-SCCCCCS------SGGG
T ss_pred hhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhc-cCCcccC------Cccc
Confidence 4699999884 6788999999999999999999999987654322 1111111 1111110 1112
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 644 EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 644 ~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
....+.++...|++.+|.+|||+.|+++
T Consensus 248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 248 WSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2345778999999999999999999864
No 301
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.28 E-value=7.7e-13 Score=143.91 Aligned_cols=89 Identities=17% Similarity=0.213 Sum_probs=60.9
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh--HHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME--KIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
+.|||||++.+..++.++|||||||+++||+||+.|++.....+ .....+++......+.. .+ +.....
T Consensus 217 ~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~---p~~~s~ 287 (396)
T 4dc2_A 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI---PRSLSV 287 (396)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------CC---CTTSCH
T ss_pred cccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------CC---CCcCCH
Confidence 46999999999999999999999999999999999996432111 11112223333222221 11 112233
Q ss_pred HHHHHHHHhcccCCCCCCCH
Q 004413 647 RVIGVALLCTQASPMMRPPM 666 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm 666 (755)
.+.++...|++.+|.+||+.
T Consensus 288 ~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 288 KAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHHHHTCSCTTTSTTC
T ss_pred HHHHHHHHHhcCCHhHcCCC
Confidence 56778899999999999985
No 302
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.28 E-value=6.9e-13 Score=144.90 Aligned_cols=108 Identities=12% Similarity=0.073 Sum_probs=73.4
Q ss_pred ccccchhhhhc--------CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcC---ccc---cccC
Q 004413 569 HGYLAPEYAMR--------GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENN---QSL---GLVD 634 (755)
Q Consensus 569 ~gy~aPE~~~~--------~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~---~~~d 634 (755)
.+|+|||++.. ..++.++|||||||+++||+||+.|+........ ..+.+....... ... ...+
T Consensus 179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~ 256 (396)
T 4eut_A 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPSGAISGVQKAEN 256 (396)
T ss_dssp CTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCTTCCEEEECSTT
T ss_pred ccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCcccchhheeccC
Confidence 57999999875 6788999999999999999999999864322111 111122222111 000 0000
Q ss_pred ------CCC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 635 ------PTL---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 635 ------~~l---~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
..+ ..........+..+...|++.||++||++.|+++.++....
T Consensus 257 ~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 257 GPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred CCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 111 23445667778889999999999999999999998887554
No 303
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.28 E-value=4.1e-13 Score=142.68 Aligned_cols=102 Identities=11% Similarity=0.051 Sum_probs=64.0
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHH--------HHhhcCccc------ccc
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAW--------NLHENNQSL------GLV 633 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~--------~~~~~~~~~------~~~ 633 (755)
..|+|||.+.. ..++.++|||||||+++||+||+.|+........ .+..... ..+...... +.+
T Consensus 194 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (330)
T 3nsz_A 194 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL 272 (330)
T ss_dssp GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH-HHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred ccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH-HHHHHHHhcCCchhhhHHHHhccccccchhhhh
Confidence 35999999877 7799999999999999999999999854432211 1111111 111111000 000
Q ss_pred C--------CCC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 634 D--------PTL-TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 634 d--------~~l-~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
. ... ..........+.++...|++.+|.+|||+.|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 000 0011112346788999999999999999999975
No 304
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.28 E-value=8.8e-13 Score=146.94 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=66.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHH-HHHH---------------HHHHhhcCc-cc-
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIY-LLEW---------------AWNLHENNQ-SL- 630 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~-l~~~---------------~~~~~~~~~-~~- 630 (755)
.+|+|||.+.+..++.++||||+||+++||++|+.|+......+... +.+. +........ ..
T Consensus 227 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~ 306 (464)
T 3ttj_A 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 306 (464)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCC
T ss_pred ccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCC
Confidence 45999999999999999999999999999999999997654322111 1000 001110000 00
Q ss_pred ----cccCCCC-C---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 631 ----GLVDPTL-T---EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 631 ----~~~d~~l-~---~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+...+ . +........+.++...|++.||++|||+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 0 001112456788999999999999999999985
No 305
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.28 E-value=4.1e-12 Score=138.91 Aligned_cols=91 Identities=13% Similarity=0.171 Sum_probs=61.4
Q ss_pred ccccchhhhhcCC----CCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 004413 569 HGYLAPEYAMRGH----LTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 644 (755)
Q Consensus 569 ~gy~aPE~~~~~~----~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 644 (755)
++|||||++.... ++.++|||||||+++||+||+.|+......+. .. ....... ...-|....++
T Consensus 233 ~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~---~i~~~~~--~~~~p~~~~~s--- 301 (410)
T 3v8s_A 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---YS---KIMNHKN--SLTFPDDNDIS--- 301 (410)
T ss_dssp GGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HH---HHHTHHH--HCCCCTTCCCC---
T ss_pred ccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH---HH---HHHhccc--cccCCCccccc---
Confidence 4699999998655 88999999999999999999999976543221 11 1111000 00011111122
Q ss_pred HHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 004413 645 ALRVIGVALLCTQASPMM--RPPMSRVVA 671 (755)
Q Consensus 645 ~~~~~~l~~~C~~~~p~~--RPsm~~v~~ 671 (755)
..+.++...|++.+|.+ ||++.||.+
T Consensus 302 -~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 302 -KEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp -HHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred -HHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 34667788999988888 999999975
No 306
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.28 E-value=3.9e-13 Score=147.93 Aligned_cols=92 Identities=16% Similarity=0.157 Sum_probs=62.6
Q ss_pred ccccchhhhh---cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAM---RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~---~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
.+|+|||++. ...++.++|||||||+++||+||+.|+........ +. ..+..+.... .+.. .....
T Consensus 305 ~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~----~~i~~~~~~~--~~~~---~~~~~ 373 (419)
T 3i6u_A 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LK----DQITSGKYNF--IPEV---WAEVS 373 (419)
T ss_dssp CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HH----HHHHTTCCCC--CHHH---HTTSC
T ss_pred CCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HH----HHHhcCCCCC--Cchh---hcccC
Confidence 4799999985 47789999999999999999999999875432211 11 1112221110 0000 01123
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.+++..|++.+|.+||++.|+++
T Consensus 374 ~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 374 EKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhC
Confidence 46778999999999999999999975
No 307
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.28 E-value=3.4e-13 Score=143.10 Aligned_cols=89 Identities=18% Similarity=0.311 Sum_probs=61.2
Q ss_pred ccccchhhhh-----cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 004413 569 HGYLAPEYAM-----RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 643 (755)
Q Consensus 569 ~gy~aPE~~~-----~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 643 (755)
..|+|||.+. ...++.++|||||||+++||+||+.|+......... ..... +....... ..+
T Consensus 193 ~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~-~~~~~~~~---~~~--- 259 (326)
T 2x7f_A 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL------FLIPR-NPAPRLKS---KKW--- 259 (326)
T ss_dssp GGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHH-SCCCCCSC---SCS---
T ss_pred ccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH------HHhhc-CccccCCc---ccc---
Confidence 4699999987 678999999999999999999999998765432211 11111 11111111 112
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 644 EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 644 ~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+.++...|++.+|.+||++.|+++
T Consensus 260 -~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 260 -SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 235677889999999999999999986
No 308
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.28 E-value=5.4e-13 Score=143.79 Aligned_cols=93 Identities=18% Similarity=0.216 Sum_probs=61.9
Q ss_pred ccccchhhhhcCCCCcc-ceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEK-ADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~k-sDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+.+..++.+ +|||||||+++||+||+.|+....... ............ ... . +.-... ...
T Consensus 181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~-~~~-~--~~~~~~----s~~ 250 (361)
T 3uc3_A 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSV-KYS-I--PDDIRI----SPE 250 (361)
T ss_dssp CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTT-CCC-C--CTTSCC----CHH
T ss_pred CCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcC-CCC-C--CCcCCC----CHH
Confidence 47999999988888766 899999999999999999987533211 111222222211 100 0 000112 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|.+|||+.|+++
T Consensus 251 ~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHHh
Confidence 678999999999999999999985
No 309
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.27 E-value=3.8e-13 Score=149.39 Aligned_cols=87 Identities=18% Similarity=0.206 Sum_probs=64.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||++.+..++.++|||||||+++||+||+.|+....... +.. .... +.. .+ +......+
T Consensus 313 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~---~i~~-~~~------~~---p~~~~~~~ 376 (446)
T 4ejn_A 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFE---LILM-EEI------RF---PRTLGPEA 376 (446)
T ss_dssp GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH---HHHH-CCC------CC---CTTSCHHH
T ss_pred ccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHH---HHHh-CCC------CC---CccCCHHH
Confidence 47999999999999999999999999999999999997654322 111 1111 111 11 11122356
Q ss_pred HHHHHHhcccCCCCCC-----CHHHHHH
Q 004413 649 IGVALLCTQASPMMRP-----PMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RP-----sm~~v~~ 671 (755)
.++...|++.+|.+|| ++.|+++
T Consensus 377 ~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 7889999999999999 9998874
No 310
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.27 E-value=1.2e-12 Score=138.09 Aligned_cols=90 Identities=21% Similarity=0.314 Sum_probs=64.5
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++||||||++++||+||+.|+......... ... ..+. .+.+ ..+......+
T Consensus 189 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~-~~~~-----~~~~-~~~~~~~~~l 255 (314)
T 3com_A 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI------FMI-PTNP-----PPTF-RKPELWSDNF 255 (314)
T ss_dssp GGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHH-HHSC-----CCCC-SSGGGSCHHH
T ss_pred CCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH------HHH-hcCC-----Cccc-CCcccCCHHH
Confidence 3599999999999999999999999999999999998765432211 111 1111 1111 0111123457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|.+||++.++++
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhhCcCHHHHHh
Confidence 78999999999999999999975
No 311
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.27 E-value=7.8e-13 Score=141.84 Aligned_cols=103 Identities=15% Similarity=0.189 Sum_probs=67.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHH-----HHhhcCccccc-cCCC------
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAW-----NLHENNQSLGL-VDPT------ 636 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~-~d~~------ 636 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+......+......... ..+........ .+..
T Consensus 203 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T 2eu9_A 203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDEN 282 (355)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTT
T ss_pred CcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccc
Confidence 56999999999999999999999999999999999998654433221111110 00000000000 0000
Q ss_pred -------------C---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 637 -------------L---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 637 -------------l---~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+ ......+...+.+++..|++.+|++|||+.||++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 283 SSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp SHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0112234557889999999999999999999963
No 312
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.27 E-value=1.5e-12 Score=136.28 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=64.5
Q ss_pred ccccchhhhhcCC-CCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccc----------cCCCC
Q 004413 569 HGYLAPEYAMRGH-LTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGL----------VDPTL 637 (755)
Q Consensus 569 ~gy~aPE~~~~~~-~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------~d~~l 637 (755)
.+|+|||.+.+.. ++.++|||||||+++||+||+.|+......+. +...... . +...+. ..+.+
T Consensus 167 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~ 241 (299)
T 2r3i_A 167 LWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRT-L--GTPDEVVWPGVTSMPDYKPSF 241 (299)
T ss_dssp CTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHH-H--CCCCTTTSTTGGGSTTCCTTS
T ss_pred ccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHH-h--CCCchhhhhHhhcCcccchhh
Confidence 4599999998765 89999999999999999999999976543221 1111111 1 111000 11111
Q ss_pred CCC--------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 TEF--------NDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ~~~--------~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
... .......+.++...|++.+|++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0112245778999999999999999999975
No 313
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.27 E-value=1.3e-12 Score=136.74 Aligned_cols=89 Identities=15% Similarity=0.119 Sum_probs=62.0
Q ss_pred ccccchhhhhcCC---CCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAMRGH---LTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~~~~---~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
..|+|||.+.... .+.++|||||||+++||+||+.|+....... +.. .+..+... .+..... .
T Consensus 201 ~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~-~~~~~~~~---~~~~~~~----~ 266 (298)
T 2zv2_A 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC------LHS-KIKSQALE---FPDQPDI----A 266 (298)
T ss_dssp GGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHH-HHHHCCCC---CCSSSCC----C
T ss_pred ccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH------HHH-HHhcccCC---CCCcccc----C
Confidence 4799999987655 4789999999999999999999987543221 111 11111111 0111122 2
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.++..+|++.+|++||++.||++
T Consensus 267 ~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 267 EDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 35778899999999999999999863
No 314
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.27 E-value=5.9e-13 Score=142.44 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=64.2
Q ss_pred ccccchhhhhc--CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 569 HGYLAPEYAMR--GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 569 ~gy~aPE~~~~--~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
.+|+|||.+.. ..++.++|||||||+++||+||+.|+......+. ......... ....+....+ ..
T Consensus 238 ~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------~~~~~~~~~--~~~~~~~~~~----~~ 305 (345)
T 3hko_A 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADT------ISQVLNKKL--CFENPNYNVL----SP 305 (345)
T ss_dssp GGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCCC--CTTSGGGGGS----CH
T ss_pred ccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHH------HHHHHhccc--ccCCcccccC----CH
Confidence 45999999875 7899999999999999999999999976543321 112221110 0111111112 23
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+.++...|++.+|.+||++.|+++
T Consensus 306 ~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 306 LARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 5778899999999999999999986
No 315
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.27 E-value=8.9e-13 Score=140.18 Aligned_cols=101 Identities=13% Similarity=0.094 Sum_probs=63.8
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhc--Cccc------ccc--CCCC
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHEN--NQSL------GLV--DPTL 637 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~------~~~--d~~l 637 (755)
.+|+|||.+.+. .++.++|||||||+++||+||+.|+......+. +.......-.. .... ... .+..
T Consensus 201 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (329)
T 3gbz_A 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFKIFEVLGLPDDTTWPGVTALPDWKQSFPKF 278 (329)
T ss_dssp CTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred ccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHHHHHHhCCCchhhhhhhhhhhhhhhhhhhh
Confidence 459999999874 489999999999999999999999976543321 11111111000 0000 000 0000
Q ss_pred CCCCHH------HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 TEFNDK------EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ~~~~~~------~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...... ....+.++...|++.+|.+|||+.|+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 279 RGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000011 1245678999999999999999999974
No 316
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.27 E-value=1.7e-12 Score=137.01 Aligned_cols=91 Identities=21% Similarity=0.288 Sum_probs=60.7
Q ss_pred ccccchhhhh-----cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 004413 569 HGYLAPEYAM-----RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDK 643 (755)
Q Consensus 569 ~gy~aPE~~~-----~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 643 (755)
..|+|||.+. ...++.++|||||||+++||+||+.|+....... +........ ..... +....+
T Consensus 188 ~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~-~~~~~--~~~~~~--- 256 (318)
T 2dyl_A 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-----EVLTKVLQE-EPPLL--PGHMGF--- 256 (318)
T ss_dssp CTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHHS-CCCCC--CSSSCC---
T ss_pred ccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-----HHHHHHhcc-CCCCC--CccCCC---
Confidence 4699999984 5678999999999999999999999987533221 111122221 11100 110112
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 644 EALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 644 ~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+.+++..|++.+|.+||++.|+++
T Consensus 257 -~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 257 -SGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 235778889999999999999999975
No 317
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.27 E-value=2.1e-13 Score=142.38 Aligned_cols=87 Identities=18% Similarity=0.277 Sum_probs=64.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++||||||++++||+||+.|+......+. ... +..+.. .+ +......+
T Consensus 179 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~-~~~~~~------~~---~~~~~~~~ 242 (294)
T 2rku_A 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLR-IKKNEY------SI---PKHINPVA 242 (294)
T ss_dssp CSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHH-HHTTCC------CC---CTTSCHHH
T ss_pred CCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHH-HhhccC------CC---ccccCHHH
Confidence 359999999999999999999999999999999999976543221 111 111111 11 11112356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++||++.|+++
T Consensus 243 ~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 243 ASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp HHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHcccChhhCcCHHHHhh
Confidence 77899999999999999999985
No 318
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.27 E-value=1.2e-12 Score=145.89 Aligned_cols=92 Identities=20% Similarity=0.195 Sum_probs=65.4
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+.+..+ +.++||||+||+++||+||+.|++...... +. ..+..+.. .. +......
T Consensus 179 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---~~----~~i~~~~~------~~---p~~~s~~ 242 (476)
T 2y94_A 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT---LF----KKICDGIF------YT---PQYLNPS 242 (476)
T ss_dssp STTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH---HH----HHHHTTCC------CC---CTTCCHH
T ss_pred cCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH---HH----HHHhcCCc------CC---CccCCHH
Confidence 46999999988765 789999999999999999999997643321 11 11222211 01 1111235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH--HHhcc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA--MLAGD 676 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~--~L~~~ 676 (755)
+.++...|++.+|.+|||+.||++ .+...
T Consensus 243 ~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 243 VISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 677899999999999999999986 55543
No 319
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.27 E-value=1.6e-12 Score=139.25 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=64.3
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccc------cccC----CCC
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSL------GLVD----PTL 637 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~d----~~l 637 (755)
..|+|||.+.+. .++.++|||||||+++||++|+.|+......+. +.. +.......... ...+ ...
T Consensus 176 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T 1ua2_A 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTR-IFETLGTPTEEQWPDMCSLPDYVTFKSF 252 (346)
T ss_dssp CTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHHHCCCCTTTSSSTTSSTTCCCCCCC
T ss_pred ccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHH-HHHHcCCCChhhhhhhccCccccccccc
Confidence 359999998764 589999999999999999999999876543221 111 11111110000 0000 000
Q ss_pred CCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 TEFN-----DKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ~~~~-----~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+ ......+.++...|++.+|.+|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 1111 112356788999999999999999999976
No 320
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.27 E-value=1.8e-12 Score=139.03 Aligned_cols=99 Identities=11% Similarity=0.098 Sum_probs=63.5
Q ss_pred cccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhc---Ccccc-----ccCC-CC--
Q 004413 570 GYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHEN---NQSLG-----LVDP-TL-- 637 (755)
Q Consensus 570 gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~-----~~d~-~l-- 637 (755)
+|+|||.+.+ ..++.++|||||||+++||+||+.|+......... ..+...... ..... ..+. ..
T Consensus 193 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (351)
T 3mi9_A 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL---ALISQLCGSITPEVWPNVDNYELYEKLELVK 269 (351)
T ss_dssp GGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCTTTSTTGGGCGGGTSSCCCS
T ss_pred CccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCChhhccccccchhhccccccc
Confidence 4999998876 56899999999999999999999999865443322 222221110 00000 0000 00
Q ss_pred -CCCC-HHH------HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 -TEFN-DKE------ALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 -~~~~-~~~------~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.... .+. ...+.++...|++.+|.+|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 270 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp SCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0001 111 124678999999999999999999975
No 321
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.27 E-value=8.7e-13 Score=144.19 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=65.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||++....++.++|||||||+++||+||+.|+........ .......+..+.. ..-.+....+ ...+
T Consensus 227 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~i~~~~~-~~~~~~~~~~----s~~~ 298 (400)
T 1nxk_A 227 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKTRIRMGQY-EFPNPEWSEV----SEEV 298 (400)
T ss_dssp CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS---CCSHHHHHHHTCC-CCCTTTTTTS----CHHH
T ss_pred CCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc---cHHHHHHHHcCcc-cCCCcccccC----CHHH
Confidence 469999999999999999999999999999999999875432110 0001111112211 1111111222 2357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++|||+.||++
T Consensus 299 ~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 299 KMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHCCCChhHCcCHHHHhc
Confidence 78999999999999999999986
No 322
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.26 E-value=6.9e-13 Score=140.50 Aligned_cols=91 Identities=16% Similarity=0.106 Sum_probs=64.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+....++.++||||||++++||+||+.|+......+. ... +..+.. -.++.. .......+
T Consensus 182 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~-i~~~~~--~~~~~~---~~~~~~~~ 249 (321)
T 2a2a_A 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET------LAN-ITSVSY--DFDEEF---FSHTSELA 249 (321)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHH-HHTTCC--CCCHHH---HTTCCHHH
T ss_pred CCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH------HHH-HHhccc--ccChhh---hcccCHHH
Confidence 469999999999999999999999999999999999976543221 111 111110 011100 00112356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|++|||+.|+++
T Consensus 250 ~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 250 KDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHhc
Confidence 78899999999999999999975
No 323
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.26 E-value=1.3e-12 Score=141.39 Aligned_cols=100 Identities=14% Similarity=0.190 Sum_probs=64.6
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc---------------cccc
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ---------------SLGL 632 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------------~~~~ 632 (755)
.+|+|||.+.+ ..++.++|||||||+++||+||+.|+......+. +.. +........ ...+
T Consensus 205 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (371)
T 4exu_A 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQ-ILKVTGVPGTEFVQKLNDKAAKSYIQSL 281 (371)
T ss_dssp CTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCCCHHHHTTCSCHHHHHHHHHS
T ss_pred ccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHH-HHHHhCCCcHHHHHHhhhhhhhhhhhcc
Confidence 46999999887 7899999999999999999999999976543221 111 111000000 0000
Q ss_pred cC---CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 633 VD---PTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 633 ~d---~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.. ..+..........+.++...|++.+|++|||+.|+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 282 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 0000011112346788999999999999999999974
No 324
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.26 E-value=4.9e-11 Score=129.83 Aligned_cols=215 Identities=7% Similarity=0.010 Sum_probs=163.6
Q ss_pred eEEecCCcCcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC
Q 004413 2 LLSVAHNVFSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP 81 (755)
Q Consensus 2 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 81 (755)
.++|..+ +...-..+|.++ +|+.+.|.+ .++..-+..|.+|.+|+.++|.+|.++......|. +.+|+.+.|.++
T Consensus 139 ~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~- 213 (401)
T 4fdw_A 139 KVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT- 213 (401)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-
T ss_pred EEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-
Confidence 4555554 554455677774 799999986 56655667899999999999999998766666776 689999999854
Q ss_pred CCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCcccc-----C
Q 004413 82 FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALIT-----G 156 (755)
Q Consensus 82 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~-----~ 156 (755)
++..-...|.++++|+.+.+..| ++..-...|.+ .+|+.+.+. +.+......+|.++++|+.+.+.+|.+. .
T Consensus 214 l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~ 290 (401)
T 4fdw_A 214 LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAM 290 (401)
T ss_dssp CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCE
T ss_pred hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccE
Confidence 66555677899999999999875 55344556666 789999994 4666777788999999999999988765 3
Q ss_pred CCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcccC-CCCCEEEeecCcCCC
Q 004413 157 SIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQKS-ENLQNIDLSYNHLSG 226 (755)
Q Consensus 157 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~Ls~N~l~g 226 (755)
.....|..|++|+.++|. +.++.....+|.+|.+|+.+.|..| ++......+. .+|+.|++++|.+..
T Consensus 291 I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 291 IHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTPPQ 359 (401)
T ss_dssp ECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSCCB
T ss_pred ECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCCcc
Confidence 456688999999999998 4577556678889999999999665 5533222221 389999999998763
No 325
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.26 E-value=4.4e-13 Score=141.98 Aligned_cols=81 Identities=17% Similarity=0.315 Sum_probs=60.0
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||++....+ +.++|||||||+++||+||+.|+.... . . .. +.. ... ..+ ...
T Consensus 212 ~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~---~-------~~-~~~--~~~---~~~----~~~ 269 (320)
T 3a99_A 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E---I-------IR-GQV--FFR---QRV----SSE 269 (320)
T ss_dssp GGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H---H-------HH-CCC--CCS---SCC----CHH
T ss_pred ccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--h---h-------hc-ccc--ccc---ccC----CHH
Confidence 46999999987766 788999999999999999999986421 0 0 01 110 111 112 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++.+|++.+|++||++.||++
T Consensus 270 ~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 270 CQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 778899999999999999999975
No 326
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.26 E-value=1.2e-12 Score=140.29 Aligned_cols=87 Identities=13% Similarity=0.093 Sum_probs=63.5
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+......+ + . ..+..+.. .+ +......+
T Consensus 202 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~---~-~~i~~~~~------~~---p~~~~~~~ 265 (350)
T 1rdq_E 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ---I---Y-EKIVSGKV------RF---PSHFSSDL 265 (350)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---H-HHHHHCCC------CC---CTTCCHHH
T ss_pred ccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH---H---H-HHHHcCCC------CC---CCCCCHHH
Confidence 57999999999999999999999999999999999997644322 1 1 11122221 11 11122356
Q ss_pred HHHHHHhcccCCCCCCC-----HHHHHH
Q 004413 649 IGVALLCTQASPMMRPP-----MSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPs-----m~~v~~ 671 (755)
.++...|++.+|.+||+ +.||.+
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 78889999999999998 777753
No 327
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.26 E-value=4e-13 Score=138.81 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=60.7
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+.+..+ +.++||||||++++||+||+.|++...... +. ..+..+.. .+ +......
T Consensus 174 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~----~~~~~~~~------~~---~~~~~~~ 237 (276)
T 2h6d_A 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT---LF----KKIRGGVF------YI---PEYLNRS 237 (276)
T ss_dssp ---CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHCCC------CC---CTTSCHH
T ss_pred ccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---HH----HHhhcCcc------cC---chhcCHH
Confidence 46999999987665 689999999999999999999987643321 11 11222211 01 1112235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|.+|||+.||++
T Consensus 238 l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 238 VATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCCCHHHHHh
Confidence 678899999999999999999986
No 328
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.26 E-value=5.2e-13 Score=138.54 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=64.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++||||||++++||+||+.|+......+. . ..+...... .++.. .......+
T Consensus 175 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~----~~~~~~~~~--~~~~~---~~~~~~~~ 242 (283)
T 3bhy_A 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET---L----TNISAVNYD--FDEEY---FSNTSELA 242 (283)
T ss_dssp GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---H----HHHHTTCCC--CCHHH---HTTCCHHH
T ss_pred cCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH---H----HHhHhcccC--Ccchh---cccCCHHH
Confidence 569999999999999999999999999999999999876543221 1 111111100 00000 01112357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|.+||++.|+++
T Consensus 243 ~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 243 KDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCCHhHCcCHHHHHh
Confidence 78999999999999999999986
No 329
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.26 E-value=8.1e-13 Score=136.44 Aligned_cols=90 Identities=18% Similarity=0.278 Sum_probs=62.9
Q ss_pred ccccchhhhhcCCC-CccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHL-TEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~-t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+....+ +.++||||||++++||+||+.|++...... ..+..|.. ... .. +....+ ...
T Consensus 171 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~-----~~~--~~-~~~~~~----~~~ 237 (276)
T 2yex_A 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKE-----KKT--YL-NPWKKI----DSA 237 (276)
T ss_dssp GGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHHHT-----TCT--TS-TTGGGS----CHH
T ss_pred cCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHhhh-----ccc--cc-Cchhhc----CHH
Confidence 46999999987665 789999999999999999999997644321 12222221 110 00 001112 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.++...|++.+|.+|||+.||++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 238 PLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHCCCCchhCCCHHHHhc
Confidence 677999999999999999999864
No 330
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.25 E-value=2.3e-13 Score=145.55 Aligned_cols=86 Identities=19% Similarity=0.237 Sum_probs=62.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+..++.++||||+||+++||+||+.|+......+ +.. .+..+. +.+. ......+
T Consensus 182 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~----~i~~~~------~~~p---~~~s~~~ 245 (345)
T 1xjd_A 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFH----SIRMDN------PFYP---RWLEKEA 245 (345)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCC------CCCC---TTSCHHH
T ss_pred cccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH---HHH----HHHhCC------CCCC---cccCHHH
Confidence 46999999999999999999999999999999999997654322 111 111111 1111 1122356
Q ss_pred HHHHHHhcccCCCCCCCHH-HHH
Q 004413 649 IGVALLCTQASPMMRPPMS-RVV 670 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~-~v~ 670 (755)
.++...|++.+|.+||++. ||.
T Consensus 246 ~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHHHHHhcCCHhHcCCChHHHH
Confidence 6788999999999999997 553
No 331
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.25 E-value=8.3e-13 Score=140.80 Aligned_cols=87 Identities=18% Similarity=0.277 Sum_probs=63.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+......+. ... +..+.. .+ +......+
T Consensus 205 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~-~~~~~~------~~---~~~~~~~~ 268 (335)
T 2owb_A 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLR-IKKNEY------SI---PKHINPVA 268 (335)
T ss_dssp CSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHH-HHHTCC------CC---CTTSCHHH
T ss_pred ccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH------HHH-HhcCCC------CC---CccCCHHH
Confidence 359999999999999999999999999999999999976543221 111 111111 11 11112356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+++..|++.+|++||++.|+++
T Consensus 269 ~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 269 ASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHccCChhHCcCHHHHhc
Confidence 67889999999999999999985
No 332
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.25 E-value=7.9e-13 Score=144.28 Aligned_cols=101 Identities=19% Similarity=0.252 Sum_probs=65.4
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHH-------hh--cCccccccCCCCC
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNL-------HE--NNQSLGLVDPTLT 638 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~-------~~--~~~~~~~~d~~l~ 638 (755)
..|+|||.+.+. .++.++|||||||+++||+||+.|+......+. +...+... +. .....+..-+.+.
T Consensus 205 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 282 (394)
T 4e7w_A 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKTMNPNYMEHKFPQIR 282 (394)
T ss_dssp GGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCC
T ss_pred cCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhhChhhhhhcccccc
Confidence 359999998764 599999999999999999999999986543321 22221110 00 0000000011111
Q ss_pred C------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 639 E------FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 639 ~------~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
. ++......+.++...|++.+|.+|||+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 283 PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1 11112346788999999999999999999985
No 333
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.25 E-value=7.5e-13 Score=142.09 Aligned_cols=89 Identities=16% Similarity=0.190 Sum_probs=63.8
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~ 647 (755)
..|+|||.+....++.++|||||||+++||+||+.|+..... .+. ..+..+... .++.. ..+ ...
T Consensus 197 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~----~~i~~~~~~--~~~~~~~~~----s~~ 262 (351)
T 3c0i_A 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLF----EGIIKGKYK--MNPRQWSHI----SES 262 (351)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHH----HHHHHTCCC--CCHHHHTTS----CHH
T ss_pred cCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHH----HHHHcCCCC--CCccccccC----CHH
Confidence 469999999999999999999999999999999999875321 111 111112110 01000 111 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|++|||+.|+++
T Consensus 263 ~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 263 AKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 678899999999999999999985
No 334
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.25 E-value=2.7e-13 Score=145.51 Aligned_cols=82 Identities=20% Similarity=0.213 Sum_probs=60.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|||||.+.+..++.++||||+||+++||+||+.|+......+ +. .. +..+.. .. +......+
T Consensus 188 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~---~~-i~~~~~------~~---p~~~~~~~ 251 (353)
T 3txo_A 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LF---EA-ILNDEV------VY---PTWLHEDA 251 (353)
T ss_dssp GGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HH-HHHCCC------CC---CTTSCHHH
T ss_pred cCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH---HH---HH-HHcCCC------CC---CCCCCHHH
Confidence 46999999999999999999999999999999999997654322 11 11 111111 11 11122346
Q ss_pred HHHHHHhcccCCCCCCCH
Q 004413 649 IGVALLCTQASPMMRPPM 666 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm 666 (755)
.++...|++.+|.+||++
T Consensus 252 ~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 252 TGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp HHHHHHHTCSSGGGSTTS
T ss_pred HHHHHHHhhhCHHHccCC
Confidence 678899999999999998
No 335
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.25 E-value=5e-13 Score=138.24 Aligned_cols=90 Identities=13% Similarity=0.084 Sum_probs=62.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+ .++.++||||||++++||+||+.|+......+. ...+.++... ........ ....+
T Consensus 172 ~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~----~~~~~ 238 (277)
T 3f3z_A 172 PYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-------MLKIREGTFT-FPEKDWLN----VSPQA 238 (277)
T ss_dssp TTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHCCCC-CCHHHHTT----SCHHH
T ss_pred CCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHhCCCC-CCchhhhc----CCHHH
Confidence 46999998764 599999999999999999999999976543221 1111222110 00000001 13467
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|++||++.|+++
T Consensus 239 ~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 239 ESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhhCcCHHHHhc
Confidence 78999999999999999999974
No 336
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.25 E-value=3.6e-13 Score=143.66 Aligned_cols=100 Identities=16% Similarity=0.182 Sum_probs=53.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||++....++.++||||||++++||+||+.|+....... ...........+.. ..-.+.... ....+
T Consensus 193 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~ 264 (336)
T 3fhr_A 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA---ISPGMKRRIRLGQY-GFPNPEWSE----VSEDA 264 (336)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CCCTTTSTT----CCHHH
T ss_pred cCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh---hhhhHHHhhhcccc-ccCchhhcc----CCHHH
Confidence 46999999999999999999999999999999999986533211 10001111111100 011111112 23457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH--HHhcc
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA--MLAGD 676 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~--~L~~~ 676 (755)
.+++..|++.+|.+|||+.|+++ .+...
T Consensus 265 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 265 KQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 78899999999999999999997 55543
No 337
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.25 E-value=1.3e-12 Score=140.27 Aligned_cols=100 Identities=13% Similarity=0.154 Sum_probs=65.5
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcC------------------cc
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENN------------------QS 629 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~------------------~~ 629 (755)
.+|+|||.+.+ ..++.++|||||||+++||+||+.|+......+. ...+....... .+
T Consensus 187 ~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
T 3coi_A 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQKLNDKAAKSYIQSL 263 (353)
T ss_dssp BCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHTTCSCHHHHHHHHTS
T ss_pred cCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHHhhHHHHHHHHhC
Confidence 46999999887 7899999999999999999999999976543221 11111110000 00
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 630 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 630 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.....+.+..........+.++...|++.+|++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 264 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000011111122233456778999999999999999999874
No 338
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.25 E-value=8.8e-13 Score=144.31 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=59.4
Q ss_pred ccccchhhhh-------cCCCCccceeeeehheeehhhhCCcCCCCCchhhHH-HHHHHHHHHhhcCccccccCCCCCCC
Q 004413 569 HGYLAPEYAM-------RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKI-YLLEWAWNLHENNQSLGLVDPTLTEF 640 (755)
Q Consensus 569 ~gy~aPE~~~-------~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~ 640 (755)
.+|||||++. .+.++.++|||||||+++||+||+.|+......+.. .+..+... .--|.+.
T Consensus 227 ~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---------~~~p~~~-- 295 (412)
T 2vd5_A 227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH---------LSLPLVD-- 295 (412)
T ss_dssp GGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---------CCCC-----
T ss_pred cCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---------cCCCccc--
Confidence 4699999987 467999999999999999999999999765433211 11111000 0011111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCC---CCHHHHHH
Q 004413 641 NDKEALRVIGVALLCTQASPMMR---PPMSRVVA 671 (755)
Q Consensus 641 ~~~~~~~~~~l~~~C~~~~p~~R---Psm~~v~~ 671 (755)
......+.++...|++ +|.+| |++.||.+
T Consensus 296 -~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 296 -EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1112356678889998 89988 68888864
No 339
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.25 E-value=1.1e-12 Score=137.56 Aligned_cols=91 Identities=15% Similarity=0.234 Sum_probs=65.5
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|+|||.+.+..++.++||||||++++||+||+.|+....... +. ..+.++.. ....+..... ...+
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~----~~i~~~~~-~~~~~~~~~~----~~~~ 238 (304)
T 2jam_A 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK---LF----EKIKEGYY-EFESPFWDDI----SESA 238 (304)
T ss_dssp CCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH----HHHHHCCC-CCCTTTTTTS----CHHH
T ss_pred CCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HH----HHHHcCCC-CCCccccccC----CHHH
Confidence 56999999999999999999999999999999999987543321 11 11222211 1111111222 2457
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|++||++.|+++
T Consensus 239 ~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 239 KDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 78999999999999999999985
No 340
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.24 E-value=3.8e-12 Score=137.49 Aligned_cols=100 Identities=15% Similarity=0.182 Sum_probs=65.2
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhc-----------C-------cc
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHEN-----------N-------QS 629 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~-----------~-------~~ 629 (755)
..|+|||.+.+ ..++.++||||+||+++||+||+.|+......+.. ..+...... . .+
T Consensus 189 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 265 (367)
T 1cm8_A 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL---KEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 265 (367)
T ss_dssp GGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCHHHHHTCSCHHHHHHHHHS
T ss_pred CCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhcCCCCHHHHHHhhhHHHHHHHHhC
Confidence 46999999887 78999999999999999999999999765432211 111110000 0 00
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 630 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 630 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+.-...+..........+.++...|++.+|.+|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 266 PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 001111111111222345778889999999999999999986
No 341
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=1e-12 Score=152.96 Aligned_cols=82 Identities=18% Similarity=0.265 Sum_probs=60.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
++|||||++....++.++|||||||+|+||+||+.|+......+ + ..... ++.. . ++......+
T Consensus 506 ~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~---~---~~~i~-~~~~------~---~p~~~s~~~ 569 (674)
T 3pfq_A 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---L---FQSIM-EHNV------A---YPKSMSKEA 569 (674)
T ss_dssp SSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHH-SSCC------C---CCTTSCHHH
T ss_pred CcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH---H---HHHHH-hCCC------C---CCccCCHHH
Confidence 56999999999999999999999999999999999997654322 1 11111 2111 1 112223456
Q ss_pred HHHHHHhcccCCCCCCCH
Q 004413 649 IGVALLCTQASPMMRPPM 666 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm 666 (755)
.++...|++.+|.+||++
T Consensus 570 ~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp HHHHHHHSCSSSTTCTTC
T ss_pred HHHHHHHccCCHHHCCCC
Confidence 778899999999999998
No 342
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.24 E-value=2.2e-12 Score=139.23 Aligned_cols=91 Identities=19% Similarity=0.243 Sum_probs=62.5
Q ss_pred ccccchhhhhc------CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCH
Q 004413 569 HGYLAPEYAMR------GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 642 (755)
Q Consensus 569 ~gy~aPE~~~~------~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 642 (755)
.+|+|||++.+ ..++.++|||||||+++||+||+.|+....... .... +..+... ...+.....
T Consensus 263 ~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---~~~~----i~~~~~~-~~~~~~~~~-- 332 (365)
T 2y7j_A 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---MLRM----IMEGQYQ-FSSPEWDDR-- 332 (365)
T ss_dssp GGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHH----HHHTCCC-CCHHHHSSS--
T ss_pred CCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH---HHHH----HHhCCCC-CCCcccccC--
Confidence 46999999864 368999999999999999999999987643321 1111 1112111 000000111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 643 KEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 643 ~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+.+++..|++.+|++||++.|+++
T Consensus 333 --~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 333 --SSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 235778999999999999999999975
No 343
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.24 E-value=5.1e-13 Score=144.42 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=63.8
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+......+ +. ..... +... +.+ .. ...+
T Consensus 203 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~---~~i~~-~~~~--~~~---~~----~~~~ 266 (373)
T 2r5t_A 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MY---DNILN-KPLQ--LKP---NI----TNSA 266 (373)
T ss_dssp CCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH---HH---HHHHH-SCCC--CCS---SS----CHHH
T ss_pred ccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH---HH---HHHHh-cccC--CCC---CC----CHHH
Confidence 46999999999999999999999999999999999997654322 11 11111 1110 111 12 2356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHh
Q 004413 649 IGVALLCTQASPMMRPPMSRVVAMLA 674 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~~L~ 674 (755)
.++...|++.+|.+||++.+.+..+.
T Consensus 267 ~~li~~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 267 RHLLEGLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp HHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred HHHHHHHcccCHHhCCCCCCCHHHHh
Confidence 77889999999999999865554443
No 344
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.24 E-value=6.9e-13 Score=142.32 Aligned_cols=82 Identities=20% Similarity=0.273 Sum_probs=59.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++|||||||+++||+||+.|+......+ +. ..... +.. .+ +......+
T Consensus 185 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~---~~---~~i~~-~~~------~~---p~~~s~~~ 248 (353)
T 2i0e_A 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LF---QSIME-HNV------AY---PKSMSKEA 248 (353)
T ss_dssp GGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HHHHH-CCC------CC---CTTSCHHH
T ss_pred ccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH---HH---HHHHh-CCC------CC---CCCCCHHH
Confidence 46999999999999999999999999999999999997644322 11 11111 111 11 11122356
Q ss_pred HHHHHHhcccCCCCCCCH
Q 004413 649 IGVALLCTQASPMMRPPM 666 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm 666 (755)
.++...|++.+|.+||++
T Consensus 249 ~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 249 VAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp HHHHHHHTCSCTTSCTTC
T ss_pred HHHHHHHhhcCHHHcCCC
Confidence 778899999999999964
No 345
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.24 E-value=1.4e-10 Score=126.31 Aligned_cols=224 Identities=8% Similarity=0.014 Sum_probs=166.2
Q ss_pred CcCCCchhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchh
Q 004413 10 FSGSVPRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDF 89 (755)
Q Consensus 10 l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 89 (755)
++..-...|.++ +|+.+.|..+ ++..-..+|.++ +|+.+.|.+ .+....+..|.+|.+|+.+++.+|+++......
T Consensus 124 i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 124 VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTT
T ss_pred cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhh
Confidence 443334567775 7999999877 664556678875 799999985 666666678999999999999999998544445
Q ss_pred hcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCC
Q 004413 90 IGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQ 169 (755)
Q Consensus 90 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 169 (755)
|. ..+|+.+.|..+ ++......|.++++|+.+++..+ +......+|.+ .+|+.+.|. +.++..-...|..|++|+
T Consensus 200 F~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 200 FV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELA 274 (401)
T ss_dssp TT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCC
T ss_pred Ee-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCC
Confidence 55 689999999855 66556678999999999999863 55666667777 789999995 556656678899999999
Q ss_pred EEeCCCCCCC-----CCCcccccCCCCCCEEEccCCcCCCCCCccc--CCCCCEEEeecCcCCCCCccc-cc--cccccc
Q 004413 170 TLDLSFNNLT-----GQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK--SENLQNIDLSYNHLSGPFPSW-VT--SNLQMN 239 (755)
Q Consensus 170 ~L~Ls~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~~L~~L~Ls~N~l~g~ip~~-~~--~~~~l~ 239 (755)
.+++.+|.+. ......|.+|++|+.++|.+ .++......+ ..+|+.|+|..| ++ .|+.. +. ....+.
T Consensus 275 ~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~~L~~l~ 351 (401)
T 4fdw_A 275 EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNTGIKEVK 351 (401)
T ss_dssp EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSSCCCEEE
T ss_pred EEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCCCCCEEE
Confidence 9999998775 34557889999999999994 4663333322 378999999665 54 33332 22 233466
Q ss_pred cccccc
Q 004413 240 LVANNF 245 (755)
Q Consensus 240 l~~n~~ 245 (755)
+.+|..
T Consensus 352 l~~n~~ 357 (401)
T 4fdw_A 352 VEGTTP 357 (401)
T ss_dssp ECCSSC
T ss_pred EcCCCC
Confidence 777654
No 346
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.24 E-value=1.1e-12 Score=142.79 Aligned_cols=100 Identities=20% Similarity=0.294 Sum_probs=61.3
Q ss_pred cccchhhhhc--CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHh----h------------------
Q 004413 570 GYLAPEYAMR--GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLH----E------------------ 625 (755)
Q Consensus 570 gy~aPE~~~~--~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~----~------------------ 625 (755)
.|+|||.+.. ..++.++|||||||+++||+||+.|+......... ........ .
T Consensus 200 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (389)
T 3gni_B 200 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDTSTIPAEELTMSPSRSVA 277 (389)
T ss_dssp GGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC----------------------------
T ss_pred cccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCcccccccccccccccccccccc
Confidence 3999999987 68999999999999999999999998754332211 00000000 0
Q ss_pred cCccccccC---CCC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 626 NNQSLGLVD---PTL-------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 626 ~~~~~~~~d---~~l-------~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.....+.+. +.. ...+......+.+++..|++.+|++|||+.|+++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 278 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000000000 000 0011122345788999999999999999999974
No 347
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.24 E-value=2.1e-12 Score=136.48 Aligned_cols=87 Identities=17% Similarity=0.132 Sum_probs=63.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+..++.++||||+||+++||+||+.|+......+ . ...... +.. .+ +......+
T Consensus 167 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~---~~~i~~-~~~------~~---p~~~~~~~ 230 (318)
T 1fot_A 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK---T---YEKILN-AEL------RF---PPFFNEDV 230 (318)
T ss_dssp TTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---H---HHHHHH-CCC------CC---CTTSCHHH
T ss_pred ccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---H---HHHHHh-CCC------CC---CCCCCHHH
Confidence 57999999999999999999999999999999999997643322 1 111121 111 11 11112356
Q ss_pred HHHHHHhcccCCCCCC-----CHHHHHH
Q 004413 649 IGVALLCTQASPMMRP-----PMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RP-----sm~~v~~ 671 (755)
.++...|++.+|.+|| ++.||.+
T Consensus 231 ~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 231 KDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 7788899999999999 7888763
No 348
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.24 E-value=1.5e-12 Score=140.10 Aligned_cols=96 Identities=25% Similarity=0.312 Sum_probs=71.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||++.+..++.++|||||||+++||+| |+.|+......+. +...+..+.... . +......
T Consensus 259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------~~~~~~~~~~~~-----~---~~~~~~~ 324 (359)
T 3vhe_A 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTRMR-----A---PDYTTPE 324 (359)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH------HHHHHHHTCCCC-----C---CTTCCHH
T ss_pred ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH------HHHHHHcCCCCC-----C---CCCCCHH
Confidence 57999999999999999999999999999999 9999875443221 112222221111 1 1112335
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIE 678 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~ 678 (755)
+.+++..|++.+|.+||||.||++.|+....
T Consensus 325 l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 325 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 7788999999999999999999999987543
No 349
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.24 E-value=1.5e-12 Score=139.40 Aligned_cols=89 Identities=17% Similarity=0.213 Sum_probs=60.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh--HHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME--KIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|++...... .....++.......+.. .+ +.....
T Consensus 174 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~---p~~~s~ 244 (345)
T 3a8x_A 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI---PRSLSV 244 (345)
T ss_dssp GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------CC---CTTSCH
T ss_pred ccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------CC---CCCCCH
Confidence 46999999999999999999999999999999999986422111 01111222222222221 11 112223
Q ss_pred HHHHHHHHhcccCCCCCCCH
Q 004413 647 RVIGVALLCTQASPMMRPPM 666 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm 666 (755)
.+.++...|++.+|.+||++
T Consensus 245 ~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 245 KAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHHHHTCSSTTTSTTC
T ss_pred HHHHHHHHHhcCCHhHCCCC
Confidence 56778899999999999995
No 350
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.23 E-value=6.5e-13 Score=137.87 Aligned_cols=85 Identities=15% Similarity=0.218 Sum_probs=60.7
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+... .++.++|||||||+++||++|+.+...... +..+..+... .+ +......
T Consensus 194 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----------~~~~~~~~~~-----~~---~~~~~~~ 255 (289)
T 1x8b_A 194 SRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----------WHEIRQGRLP-----RI---PQVLSQE 255 (289)
T ss_dssp GGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----------HHHHHTTCCC-----CC---SSCCCHH
T ss_pred ccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----------HHHHHcCCCC-----CC---CcccCHH
Confidence 569999999765 677899999999999999999987543211 1112222221 11 1112345
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|++|||+.|+++
T Consensus 256 ~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 256 FTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhCCCcccCCCHHHHhh
Confidence 778899999999999999999874
No 351
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.23 E-value=6.6e-13 Score=144.66 Aligned_cols=41 Identities=29% Similarity=0.367 Sum_probs=36.6
Q ss_pred cccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCch
Q 004413 570 GYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLD 610 (755)
Q Consensus 570 gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~ 610 (755)
.|+|||.+.+ ..++.++|||||||+++||+||+.|+.....
T Consensus 195 ~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 195 WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 3999999876 6899999999999999999999999976543
No 352
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.23 E-value=1.1e-12 Score=140.78 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=63.5
Q ss_pred cccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc----ccccc-----------
Q 004413 570 GYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ----SLGLV----------- 633 (755)
Q Consensus 570 gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~----------- 633 (755)
.|+|||.+.. ..++.++|||||||+++||++|+.|+......+. ...+........ ...+.
T Consensus 187 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
T 2b9h_A 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGIIGTPHSDNDLRCIESPRAREYIKSL 263 (353)
T ss_dssp GGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTS
T ss_pred cccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCCCchhccccccccchhhHHhhcc
Confidence 4999998764 7899999999999999999999999976543221 111111111000 00000
Q ss_pred ----CCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 634 ----DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 634 ----d~~l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+..........+.+++..|++.+|.+|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000112345778999999999999999999975
No 353
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.22 E-value=1e-12 Score=141.75 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=63.1
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc---------------cccc
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ---------------SLGL 632 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------------~~~~ 632 (755)
.+|+|||.+.. ..++.++|||||||+++||+||+.|+......+... .+........ ....
T Consensus 195 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (364)
T 3qyz_A 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN---HILGILGSPSQEDLNCIINLKARNYLLSL 271 (364)
T ss_dssp GGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHH---HHHHHHCSCCHHHHHTCCCHHHHHHHHTS
T ss_pred cCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHH---HHHHHhCCCCHHHHHHhhhhhHHHHHHhc
Confidence 35999998764 458999999999999999999999997654433211 1111100000 0000
Q ss_pred cCCCC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 633 VDPTL---TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 633 ~d~~l---~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.- ..........+.++...|++.+|++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 272 PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0000112245778999999999999999999974
No 354
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.22 E-value=2.9e-12 Score=143.91 Aligned_cols=90 Identities=20% Similarity=0.226 Sum_probs=63.3
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
++|+|||.+.+ .++.++||||+||+++||+||+.|+......+ +.. .+..+... .-.+..... ...+
T Consensus 187 ~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~----~i~~~~~~-~~~~~~~~~----s~~~ 253 (486)
T 3mwu_A 187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---ILK----RVETGKYA-FDLPQWRTI----SDDA 253 (486)
T ss_dssp GGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCCC-SCSGGGGGS----CHHH
T ss_pred CCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHHhCCCC-CCCcccCCC----CHHH
Confidence 46999998864 69999999999999999999999997654322 111 12222211 000111112 2356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|.+|||+.|+++
T Consensus 254 ~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 254 KDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHhc
Confidence 78899999999999999999986
No 355
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.22 E-value=4.2e-12 Score=137.05 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=64.3
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCc---cccc--------cC--
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQ---SLGL--------VD-- 634 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~--------~d-- 634 (755)
..|+|||.+.+ ..++.++|||||||+++||+||+.|+......+. ...+.+...... ...+ +.
T Consensus 193 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~ 269 (367)
T 2fst_X 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAELLKKISSESARNYIQSL 269 (367)
T ss_dssp CTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHTTCCCHHHHHHHHTS
T ss_pred cCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHhhhHHHHHHHhcc
Confidence 46999999877 7899999999999999999999999976543221 111111110000 0000 00
Q ss_pred CCCCCCCH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 635 PTLTEFND-----KEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 635 ~~l~~~~~-----~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.....+. .....+.++...|++.+|.+|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00001111 11235678999999999999999999975
No 356
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.22 E-value=1.5e-12 Score=139.92 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=60.7
Q ss_pred ccccchhhhhc--CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 569 HGYLAPEYAMR--GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 569 ~gy~aPE~~~~--~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
.+|+|||++.+ ..++.++|||||||+++||+||+.|+........ ...+....... .+.. +.+...
T Consensus 224 ~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~-------~~~~---~~~~~~ 291 (355)
T 1vzo_A 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKS-------EPPY---PQEMSA 291 (355)
T ss_dssp CTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHC-------CCCC---CTTSCH
T ss_pred cCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhcc-------CCCC---CcccCH
Confidence 46999999985 4578999999999999999999999864322111 11222222211 1111 122234
Q ss_pred HHHHHHHHhcccCCCCCC-----CHHHHHH
Q 004413 647 RVIGVALLCTQASPMMRP-----PMSRVVA 671 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RP-----sm~~v~~ 671 (755)
.+.+++..|++.+|.+|| ++.|+++
T Consensus 292 ~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp HHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred HHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 567889999999999999 8888875
No 357
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.22 E-value=4.3e-12 Score=133.87 Aligned_cols=97 Identities=13% Similarity=0.124 Sum_probs=62.9
Q ss_pred cccchhhhhc-----CCCCccceeeeehheeehhhhCCcCCCCCchhhH--------HHHHHHHHHHhhcCccccccCCC
Q 004413 570 GYLAPEYAMR-----GHLTEKADVFSFGVAALEIISGRANSDNSLDMEK--------IYLLEWAWNLHENNQSLGLVDPT 636 (755)
Q Consensus 570 gy~aPE~~~~-----~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~d~~ 636 (755)
.|+|||.+.. ..++.++|||||||+++||+||+.|+......+. .....-....+..+... .-++.
T Consensus 186 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 264 (316)
T 2ac3_A 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE-FPDKD 264 (316)
T ss_dssp GGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCC-CCHHH
T ss_pred CccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcc-cCchh
Confidence 5999999875 5689999999999999999999999875432110 00001111122222110 00000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 637 LTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 637 l~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
... ....+.++...|++.+|.+|||+.|+++
T Consensus 265 ~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 265 WAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 011 1235778999999999999999999986
No 358
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.22 E-value=1.8e-12 Score=140.85 Aligned_cols=101 Identities=20% Similarity=0.207 Sum_probs=65.2
Q ss_pred ccccchhhhhcC-CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHh---------hcCccccccCCCCC
Q 004413 569 HGYLAPEYAMRG-HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLH---------ENNQSLGLVDPTLT 638 (755)
Q Consensus 569 ~gy~aPE~~~~~-~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~d~~l~ 638 (755)
..|+|||.+.+. .++.++|||||||+++||+||+.|+......+. +...+...- ......+..-+.+.
T Consensus 205 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 282 (383)
T 3eb0_A 205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQ--LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK 282 (383)
T ss_dssp SSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCC
T ss_pred CCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCCHHHHHHhCcccccccCCccC
Confidence 459999988764 599999999999999999999999986543321 222111100 00001111111111
Q ss_pred C------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 639 E------FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 639 ~------~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
. .+......+.+++..|++.+|.+|||+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 283 AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 12223345788999999999999999999974
No 359
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.22 E-value=4.1e-12 Score=142.97 Aligned_cols=90 Identities=21% Similarity=0.250 Sum_probs=63.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+. +.++.++||||+||+++||+||+.|+......+ +. ..+..+... ...+.....+ ..+
T Consensus 202 ~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~----~~i~~~~~~-~~~~~~~~~s----~~~ 268 (494)
T 3lij_A 202 AYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE---IL----RKVEKGKYT-FDSPEWKNVS----EGA 268 (494)
T ss_dssp TTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHTCCC-CCSGGGTTSC----HHH
T ss_pred cCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH---HH----HHHHhCCCC-CCchhcccCC----HHH
Confidence 4699999876 679999999999999999999999997654322 11 112222111 1111111222 356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|.+|||+.|+++
T Consensus 269 ~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 269 KDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHCCCChhhCccHHHHhc
Confidence 77899999999999999999984
No 360
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.21 E-value=1.7e-12 Score=145.75 Aligned_cols=90 Identities=21% Similarity=0.238 Sum_probs=63.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
++|+|||.+.+ .++.++||||+||+++||+||+.|+......+ +.. .+..+... .-.+.... ....+
T Consensus 192 ~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~----~i~~~~~~-~~~~~~~~----~s~~~ 258 (484)
T 3nyv_A 192 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD---ILK----KVEKGKYT-FELPQWKK----VSESA 258 (484)
T ss_dssp GGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCCCC-CCSGGGGG----SCHHH
T ss_pred ccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH---HHH----HHHcCCCC-CCCccccc----CCHHH
Confidence 46999998865 79999999999999999999999997654322 222 12222211 00011111 22356
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|.+|||+.|+++
T Consensus 259 ~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 259 KDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHCCCChhHCcCHHHHhh
Confidence 78899999999999999999985
No 361
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.21 E-value=1.2e-12 Score=138.99 Aligned_cols=87 Identities=16% Similarity=0.148 Sum_probs=62.4
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+....++.++|||||||+++||+||+.|+......+ . ...... +.. .+ +......+
T Consensus 185 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~---~~~i~~-~~~------~~---p~~~~~~~ 248 (327)
T 3a62_A 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK---T---IDKILK-CKL------NL---PPYLTQEA 248 (327)
T ss_dssp CTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---H---HHHHHH-TCC------CC---CTTSCHHH
T ss_pred cCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH---H---HHHHHh-CCC------CC---CCCCCHHH
Confidence 46999999999999999999999999999999999997654322 1 111111 111 11 11122356
Q ss_pred HHHHHHhcccCCCCCC-----CHHHHHH
Q 004413 649 IGVALLCTQASPMMRP-----PMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RP-----sm~~v~~ 671 (755)
.++...|++.+|.+|| ++.|+++
T Consensus 249 ~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 249 RDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 7888999999999999 5666654
No 362
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=2.6e-13 Score=146.41 Aligned_cols=180 Identities=17% Similarity=0.134 Sum_probs=105.6
Q ss_pred ccCcEEEccccCCCCCCchhhhcC-----CCCCEEEccCCCCCCCcchhh-cCCCCCcEEEccCCCCCCCCCccc-----
Q 004413 46 AKLEQLYLNSWGAGGEIPSTYAKL-----RNMQTLWASDAPFTGKIPDFI-GNWTKLKSLRFQGNSFQGPIPSSL----- 114 (755)
Q Consensus 46 ~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~l----- 114 (755)
++|++|+|++|.++......+..+ .+|++|+|++|.++......+ ..+.+|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456666666666654333332222 566777777776653322222 234566777777776653322222
Q ss_pred cCCCCCCeeecCCCCCCCCChh----hhcCCCCCCEEEeeCccccCC----CCccccCCCCCCEEeCCCCCCCCC----C
Q 004413 115 SKLASLDSLRISDIYNVSSSLD----FVMSLKNLTDLSLRNALITGS----IPSGIGELQNLQTLDLSFNNLTGQ----I 182 (755)
Q Consensus 115 ~~l~~L~~L~l~~n~~~~~~~~----~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 182 (755)
...++|++|+|++|.+...... .+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2356777777777765543322 346677788888888887643 345566778899999999988753 3
Q ss_pred cccccCCCCCCEEEccCCcCCCCCCccc----CC---CCCEEE--eecCcCC
Q 004413 183 PRTLFNIGSLNYLFLGNNSLSGTLPTQK----SE---NLQNID--LSYNHLS 225 (755)
Q Consensus 183 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~---~L~~L~--Ls~N~l~ 225 (755)
...+..+++|+.|+|++|.|+....... .. .|+.+. +..|.++
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 3445567889999999998874322211 11 266666 6666654
No 363
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.20 E-value=1.4e-12 Score=138.18 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=62.8
Q ss_pred ccccchhhhh---cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHH
Q 004413 569 HGYLAPEYAM---RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~---~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 645 (755)
.+|+|||.+. ...++.++|||||||+++||+||+.|+....... .+... +..+... ..+.. .....
T Consensus 180 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~----~~~~~~~--~~~~~---~~~~~ 248 (322)
T 2ycf_A 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQ----ITSGKYN--FIPEV---WAEVS 248 (322)
T ss_dssp CTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHH----HHHTCCC--CCHHH---HTTSC
T ss_pred cCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHH----HHhCccc--cCchh---hhhcC
Confidence 4799999874 5778999999999999999999999987543221 11111 1112111 00000 01123
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.+++..|++.+|++||++.|+++
T Consensus 249 ~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 249 EKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 46778999999999999999999874
No 364
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.20 E-value=2.6e-12 Score=133.59 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=63.0
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
..|+|||.+.+ .++.++||||||++++||+||+.|+......+ +. ..+..+....- .+....+ ...+
T Consensus 187 ~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~----~~~~~~~~~~~-~~~~~~~----~~~~ 253 (287)
T 2wei_A 187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---IL----KRVETGKYAFD-LPQWRTI----SDDA 253 (287)
T ss_dssp HTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHCCCCCC-SGGGTTS----CHHH
T ss_pred ccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH---HH----HHHHcCCCCCC-chhhhhc----CHHH
Confidence 35999998764 59999999999999999999999987654322 11 11222221100 0111122 2357
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 004413 649 IGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.++...|++.+|++|||+.|+++
T Consensus 254 ~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 254 KDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcccChhhCcCHHHHhc
Confidence 78999999999999999999986
No 365
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.19 E-value=2.3e-12 Score=135.69 Aligned_cols=81 Identities=17% Similarity=0.330 Sum_probs=59.8
Q ss_pred ccccchhhhhcCCCC-ccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLT-EKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t-~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||++....+. .++||||||++++||+||+.|+.... .+ .. .. ..+ +......
T Consensus 202 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~-------~~-~~------~~~---~~~~~~~ 259 (312)
T 2iwi_A 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EI-------LE-AE------LHF---PAHVSPD 259 (312)
T ss_dssp TTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH-------HH-TC------CCC---CTTSCHH
T ss_pred ccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HH-------hh-hc------cCC---cccCCHH
Confidence 469999999877764 59999999999999999999986421 00 00 10 001 1112235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|++||++.||++
T Consensus 260 ~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 260 CCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 678899999999999999999986
No 366
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.19 E-value=8.2e-13 Score=139.46 Aligned_cols=100 Identities=14% Similarity=0.197 Sum_probs=64.1
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhc----------Cccc-----cc
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHEN----------NQSL-----GL 632 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~----------~~~~-----~~ 632 (755)
..|+|||.+.. ..++.++|||||||+++||+||+.|+......+... .+...... ..+. ..
T Consensus 188 ~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T 2i6l_A 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ---LILESIPVVHEEDRQELLSVIPVYIRNDM 264 (320)
T ss_dssp CTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHSCCCCHHHHHHHHTTSCHHHHHHT
T ss_pred ccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcCCCchhhhhhhhhcCcccccccc
Confidence 34999998875 789999999999999999999999998654332111 11100000 0000 00
Q ss_pred cCCCC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 633 VDPTL--TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 633 ~d~~l--~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.. ..........+.+++..|++.+|++|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 265 TEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp TSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00100 0001112346778999999999999999999975
No 367
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.19 E-value=4.9e-12 Score=135.18 Aligned_cols=97 Identities=21% Similarity=0.258 Sum_probs=71.2
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|+|||.+.++.++.++|||||||+++||+| |+.|+........ + ......+.. +.. +......
T Consensus 238 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~----~~~~~~~~~-----~~~---~~~~~~~ 303 (344)
T 1rjb_A 238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN--F----YKLIQNGFK-----MDQ---PFYATEE 303 (344)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--H----HHHHHTTCC-----CCC---CTTCCHH
T ss_pred cCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH--H----HHHHhcCCC-----CCC---CCCCCHH
Confidence 56999999999999999999999999999999 9999876543221 1 122222211 111 1122346
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
+.+++..||+.+|.+||++.||++.|+.....
T Consensus 304 l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 304 IYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 77899999999999999999999999876554
No 368
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.18 E-value=4.7e-12 Score=138.75 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=35.4
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCC
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNS 608 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~ 608 (755)
..|+|||.+.+ ..++.++|||||||+++||+||+.|+...
T Consensus 199 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 35999999887 45999999999999999999999998654
No 369
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.18 E-value=2.1e-12 Score=146.11 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=62.9
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh-HHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME-KIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
.+|||||++.+..++.++|||||||+++||+||+.|+....... ...+.. ...... ..+ +......
T Consensus 349 ~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~----~i~~~~------~~~---p~~~s~~ 415 (576)
T 2acx_A 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER----LVKEVP------EEY---SERFSPQ 415 (576)
T ss_dssp GGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH----HHHHCC------CCC---CTTSCHH
T ss_pred ccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH----Hhhccc------ccC---CccCCHH
Confidence 46999999999999999999999999999999999997643211 111111 111111 111 1112235
Q ss_pred HHHHHHHhcccCCCCCC-----CHHHHHH
Q 004413 648 VIGVALLCTQASPMMRP-----PMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RP-----sm~~v~~ 671 (755)
+.+++..|++.+|.+|| ++.||.+
T Consensus 416 ~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 416 ARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 67788999999999999 6777763
No 370
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.18 E-value=4.7e-12 Score=132.35 Aligned_cols=91 Identities=19% Similarity=0.207 Sum_probs=63.5
Q ss_pred ccccchhhhh------cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCH
Q 004413 569 HGYLAPEYAM------RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFND 642 (755)
Q Consensus 569 ~gy~aPE~~~------~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 642 (755)
..|+|||.+. ...++.++||||||++++||+||+.|+....... .. ..+..+... ...+...
T Consensus 187 ~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~----~~~~~~~~~-~~~~~~~---- 254 (298)
T 1phk_A 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---ML----RMIMSGNYQ-FGSPEWD---- 254 (298)
T ss_dssp GGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHTCCC-CCTTTGG----
T ss_pred ccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH---HH----HHHhcCCcc-cCccccc----
Confidence 4699999885 4678999999999999999999999987644322 11 111112111 1111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 643 KEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 643 ~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.....+.++...|++.+|.+||++.|+++
T Consensus 255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp GSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 22346778999999999999999999874
No 371
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.16 E-value=5.9e-11 Score=126.99 Aligned_cols=101 Identities=16% Similarity=0.131 Sum_probs=47.4
Q ss_pred EEccCc-cCCCCCcccccCCccCcEEEccc-cCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCC
Q 004413 27 LSFGNN-NFSGTLPPEIGNLAKLEQLYLNS-WGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGN 104 (755)
Q Consensus 27 L~Ls~n-~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 104 (755)
++++++ .++ .+|. |..+.+|++|+|++ |.+.+..+..|..|++|++|+|++|+|++..|..|.+|++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 444 3444 44444555555543 4444444444555555555555555555444444455555555555555
Q ss_pred CCCCCCCccccCCCCCCeeecCCCCC
Q 004413 105 SFQGPIPSSLSKLASLDSLRISDIYN 130 (755)
Q Consensus 105 ~l~~~~p~~l~~l~~L~~L~l~~n~~ 130 (755)
+|++..+..+..+. |+.|+|.+|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCc
Confidence 55433333333333 55555555443
No 372
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.16 E-value=4.8e-12 Score=142.81 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=64.9
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCC-CCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDP-TLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~ 647 (755)
+.|+|||.+. +.++.++||||+||+++||+||+.|+......+ +. ..+..+... .+. ..... ...
T Consensus 212 ~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~----~~i~~~~~~--~~~~~~~~~----s~~ 277 (504)
T 3q5i_A 212 AYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD---II----KKVEKGKYY--FDFNDWKNI----SDE 277 (504)
T ss_dssp TTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHCCCC--CCHHHHTTS----CHH
T ss_pred cCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HH----HHHHcCCCC--CCccccCCC----CHH
Confidence 4699999876 579999999999999999999999997654322 11 112222211 000 00111 235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH--HHhc
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA--MLAG 675 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~--~L~~ 675 (755)
+.++...|++.+|.+|||+.|+++ ++..
T Consensus 278 ~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 307 (504)
T 3q5i_A 278 AKELIKLMLTYDYNKRCTAEEALNSRWIKK 307 (504)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence 778899999999999999999985 4443
No 373
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.3e-12 Score=141.07 Aligned_cols=159 Identities=16% Similarity=0.145 Sum_probs=120.9
Q ss_pred CCCCCEEEccCCCCCCCcchhhcC-----CCCCcEEEccCCCCCCCCCccc-cCCCCCCeeecCCCCCCCCChhhh----
Q 004413 69 LRNMQTLWASDAPFTGKIPDFIGN-----WTKLKSLRFQGNSFQGPIPSSL-SKLASLDSLRISDIYNVSSSLDFV---- 138 (755)
Q Consensus 69 l~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~l~~n~~~~~~~~~l---- 138 (755)
+++|+.|+|++|.++......+.. ..+|++|+|++|.++......+ ..+++|+.|+|++|.+.......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 478999999999998544444332 3799999999999974333333 235689999999998876555444
Q ss_pred -cCCCCCCEEEeeCccccCC----CCccccCCCCCCEEeCCCCCCCCC----CcccccCCCCCCEEEccCCcCCCCCCcc
Q 004413 139 -MSLKNLTDLSLRNALITGS----IPSGIGELQNLQTLDLSFNNLTGQ----IPRTLFNIGSLNYLFLGNNSLSGTLPTQ 209 (755)
Q Consensus 139 -~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 209 (755)
...++|+.|+|++|.++.. ++..+..+++|++|+|++|.+++. +...+..+++|+.|+|++|.|+......
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3568899999999998753 445557889999999999999853 3566778889999999999998532221
Q ss_pred ------cCCCCCEEEeecCcCCCC
Q 004413 210 ------KSENLQNIDLSYNHLSGP 227 (755)
Q Consensus 210 ------~~~~L~~L~Ls~N~l~g~ 227 (755)
..++|++|||++|.|+..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHH
Confidence 237899999999999743
No 374
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.15 E-value=9.8e-12 Score=137.14 Aligned_cols=90 Identities=23% Similarity=0.273 Sum_probs=61.3
Q ss_pred ccccchhhhh---cCCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 004413 569 HGYLAPEYAM---RGHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKE 644 (755)
Q Consensus 569 ~gy~aPE~~~---~~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 644 (755)
.+|+|||.+. ...++.++|||||||+++||+| |+.|+........ ........ .... ......
T Consensus 190 ~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-------~~~~~~~~-~~~~-----~~~~~~ 256 (432)
T 3p23_A 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-------NILLGACS-LDCL-----HPEKHE 256 (432)
T ss_dssp TTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-------HHHTTCCC-CTTS-----CTTCHH
T ss_pred cCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-------HHHhccCC-cccc-----Cccccc
Confidence 5799999987 5678899999999999999999 8888854332211 11111110 1111 111233
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 645 ALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 645 ~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+.+++..|++.+|.+|||+.||++
T Consensus 257 ~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 257 DVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 445678999999999999999999983
No 375
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.15 E-value=6.4e-12 Score=134.07 Aligned_cols=107 Identities=15% Similarity=0.121 Sum_probs=73.3
Q ss_pred ccccccchhhhhcC------CCCccceeeeehheeehhhhC----------CcCCCCCchhhHHHHHHHHHHHhhcCccc
Q 004413 567 NFHGYLAPEYAMRG------HLTEKADVFSFGVAALEIISG----------RANSDNSLDMEKIYLLEWAWNLHENNQSL 630 (755)
Q Consensus 567 df~gy~aPE~~~~~------~~t~ksDVysfGvvllElltg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 630 (755)
+...|+|||.+... .++.|+|||||||+++||+|| +.|+....... .....+... +..
T Consensus 213 gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~-~~~---- 286 (342)
T 1b6c_B 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD-PSVEEMRKV-VCE---- 286 (342)
T ss_dssp CCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS-CCHHHHHHH-HTT----
T ss_pred cCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc-ccHHHHHHH-HHH----
Confidence 34689999998765 344799999999999999999 66765432211 011122221 111
Q ss_pred cccCCCCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccc
Q 004413 631 GLVDPTLTE--FNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 631 ~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
....+.+.. ...++...+.+++.+||+.+|++|||+.||++.|+.....
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 287 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 122233321 2346677899999999999999999999999999976543
No 376
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.15 E-value=8.9e-12 Score=134.47 Aligned_cols=90 Identities=9% Similarity=0.014 Sum_probs=64.8
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|||||++.+..++.++|||||||+++||+||+.|+....... ..++..+...+. ...+
T Consensus 249 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------------------~~~~~~~~~~~~--~~~~ 308 (365)
T 3e7e_A 249 SGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------------------CKPEGLFRRLPH--LDMW 308 (365)
T ss_dssp TSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE------------------EEECSCCTTCSS--HHHH
T ss_pred CCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc------------------eeechhccccCc--HHHH
Confidence 47999999999999999999999999999999999975322110 011122222221 2234
Q ss_pred HHHHHHhcccCCCCC-CCHHHHHHHHhcccc
Q 004413 649 IGVALLCTQASPMMR-PPMSRVVAMLAGDIE 678 (755)
Q Consensus 649 ~~l~~~C~~~~p~~R-Psm~~v~~~L~~~~~ 678 (755)
-++...|++.+|.+| |++.++.+.|+....
T Consensus 309 ~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 309 NEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp HHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 467778899999998 688888888886544
No 377
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.14 E-value=5.6e-12 Score=142.23 Aligned_cols=87 Identities=22% Similarity=0.240 Sum_probs=60.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
+.|||||.+.+..++.++|||||||+++||+||+.|+........ ..++...... +.. . ++......+
T Consensus 353 ~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~-~~~------~---~p~~~s~~~ 420 (543)
T 3c4z_A 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLE-QAV------T---YPDKFSPAS 420 (543)
T ss_dssp TTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHH-CCC------C---CCTTSCHHH
T ss_pred ccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhh-ccc------C---CCcccCHHH
Confidence 469999999999999999999999999999999999975422110 1111111111 110 1 111223356
Q ss_pred HHHHHHhcccCCCCCCCHH
Q 004413 649 IGVALLCTQASPMMRPPMS 667 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPsm~ 667 (755)
.++...|++.+|.+||++.
T Consensus 421 ~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 421 KDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp HHHHHHHSCSSGGGSCCCB
T ss_pred HHHHHHhccCCHhHCCCCc
Confidence 6788999999999999863
No 378
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.14 E-value=2.7e-11 Score=130.00 Aligned_cols=108 Identities=11% Similarity=0.049 Sum_probs=75.2
Q ss_pred cccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 568 FHGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 568 f~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
...|+|||.+.+..++.++|||||||+++||+||+.|+....... ..+..+...... ......++.... ......
T Consensus 231 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~ 305 (352)
T 2jii_A 231 DLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT-EDIMKQKQKFVD--KPGPFVGPCGHW--IRPSET 305 (352)
T ss_dssp CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHHHHHHHHHH--SCCCEECTTSCE--ECCCHH
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH-HHHHHHHHhccC--Chhhhhhhcccc--CCCcHH
Confidence 368999999999999999999999999999999999987543211 222222222221 112222222100 011246
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHhcccccC
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 680 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~~L~~~~~~~ 680 (755)
+.+++..|++.+|.+||++.+|+++|+......
T Consensus 306 l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 306 LQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp HHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 778899999999999999999999999876553
No 379
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.13 E-value=1.4e-11 Score=137.13 Aligned_cols=31 Identities=35% Similarity=0.558 Sum_probs=28.2
Q ss_pred ccchhhh-hcCCCCccceeeeehheeehhhhC
Q 004413 571 YLAPEYA-MRGHLTEKADVFSFGVAALEIISG 601 (755)
Q Consensus 571 y~aPE~~-~~~~~t~ksDVysfGvvllElltg 601 (755)
|+|||++ ....++.++|||||||+|+||+||
T Consensus 249 Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 249 YRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 9999976 566799999999999999999994
No 380
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.11 E-value=1.2e-11 Score=141.47 Aligned_cols=95 Identities=21% Similarity=0.185 Sum_probs=62.1
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccC----C------CC-
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVD----P------TL- 637 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d----~------~l- 637 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+..... ...|.......+......+ . .+
T Consensus 187 ~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp 261 (676)
T 3qa8_A 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLP 261 (676)
T ss_dssp CTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCSCCCCSSSCCCCSSSC
T ss_pred cccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhhhhhhccccccccccC
Confidence 469999999999999999999999999999999999875322 1233222111111111111 1 11
Q ss_pred --CCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 004413 638 --TEFNDKEALRVIGVALLCTQASPMMRPPMSR 668 (755)
Q Consensus 638 --~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~ 668 (755)
..........+.++...|++.+|++|||+.|
T Consensus 262 ~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 262 TPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp CSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred CchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 1233445677889999999999999999976
No 381
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.11 E-value=1.3e-11 Score=133.67 Aligned_cols=83 Identities=13% Similarity=0.072 Sum_probs=60.8
Q ss_pred ccccchhhhhcC-----------CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC
Q 004413 569 HGYLAPEYAMRG-----------HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL 637 (755)
Q Consensus 569 ~gy~aPE~~~~~-----------~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 637 (755)
.+|+|||++... .++.|+|||||||+++||+||+.|+....... ....+. +..
T Consensus 266 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~---------------~~~~~~-~~~ 329 (377)
T 3byv_A 266 RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALG---------------GSEWIF-RSC 329 (377)
T ss_dssp TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------C---------------CSGGGG-SSC
T ss_pred cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccccc---------------chhhhh-hhc
Confidence 789999999887 89999999999999999999999986432111 011111 111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..++ ..+.+++..|++.+|++||++.|+++
T Consensus 330 ~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 330 KNIP----QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp CCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred cCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 2222 35778899999999999999999985
No 382
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.10 E-value=9.1e-12 Score=134.71 Aligned_cols=95 Identities=8% Similarity=-0.137 Sum_probs=64.2
Q ss_pred ccccchhhhhc--CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC-CCCCHHHH
Q 004413 569 HGYLAPEYAMR--GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL-TEFNDKEA 645 (755)
Q Consensus 569 ~gy~aPE~~~~--~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~ 645 (755)
.+|+|||.+.. ..++.++|||||||+++||+||+.|+......... .+............+ ........
T Consensus 255 ~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 326 (371)
T 3q60_A 255 VTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG--------SWKRPSLRVPGTDSLAFGSCTPLP 326 (371)
T ss_dssp GGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT--------CCCBCCTTSCCCCSCCCTTSSCCC
T ss_pred cCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccccc--------chhhhhhhhccccccchhhccCCC
Confidence 68999999987 78999999999999999999999998754322100 000000000111111 01111233
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 646 LRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 646 ~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
..+.+++..|++.+|++|||+.|+++
T Consensus 327 ~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 327 DFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 46778999999999999999999964
No 383
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.09 E-value=3.5e-11 Score=131.02 Aligned_cols=103 Identities=16% Similarity=0.132 Sum_probs=69.6
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh---HHHHHHHHHHHh--------hcCcc-ccccCC-
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME---KIYLLEWAWNLH--------ENNQS-LGLVDP- 635 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~---~~~l~~~~~~~~--------~~~~~-~~~~d~- 635 (755)
..|+|||.+.+..++.++|||||||+++||+||+.|+......+ .......+.... ..+.. .+.++.
T Consensus 257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 336 (397)
T 1wak_A 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK 336 (397)
T ss_dssp GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCc
Confidence 67999999999999999999999999999999999997543211 111111111111 00110 011110
Q ss_pred ---------CC----------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 636 ---------TL----------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 636 ---------~l----------~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.. .+.+.+....+.+++..|++.+|++|||+.||++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 1234566778899999999999999999999974
No 384
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.09 E-value=6.6e-11 Score=127.79 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=66.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhh----HHHHHHHHHH-------HhhcCc---------
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDME----KIYLLEWAWN-------LHENNQ--------- 628 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~----~~~l~~~~~~-------~~~~~~--------- 628 (755)
.+|+|||.+.+..++.++|||||||+++||+||+.|+....... ...+...... .+..+.
T Consensus 199 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 278 (373)
T 1q8y_A 199 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSR 278 (373)
T ss_dssp GGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC-
T ss_pred ccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCc
Confidence 67999999999999999999999999999999999987543211 1111111110 000000
Q ss_pred --cccccCCCC----------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 629 --SLGLVDPTL----------TEFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 629 --~~~~~d~~l----------~~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
...+..... ...+......+.+++..|++.+|++|||+.||++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 279 GLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp -CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred chhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 000000000 1234566778899999999999999999999975
No 385
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.08 E-value=5.5e-11 Score=123.72 Aligned_cols=90 Identities=16% Similarity=0.246 Sum_probs=63.4
Q ss_pred cccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 568 FHGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 568 f~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..+|+|||.+. +.++.++||||+||+++||+||+.|+........ + ......+......+ ......
T Consensus 193 t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~----~~~~~~~~~~~~~~-------~~~~~~ 258 (290)
T 1t4h_A 193 TPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--I----YRRVTSGVKPASFD-------KVAIPE 258 (290)
T ss_dssp SCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--H----HHHHTTTCCCGGGG-------GCCCHH
T ss_pred CcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH--H----HHHHhccCCccccC-------CCCCHH
Confidence 36899999776 6699999999999999999999999876433221 1 11122111111111 111235
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|.+|||+.||++
T Consensus 259 l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 259 VKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCCCHHHHhh
Confidence 778999999999999999999975
No 386
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.08 E-value=2.5e-10 Score=122.05 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=87.7
Q ss_pred eEEecCC-cCcCCCchhhcCCCCCCEEEccC-ccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 004413 2 LLSVAHN-VFSGSVPRELGNLKELTVLSFGN-NNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 2 ~L~Ls~n-~l~~~~p~~l~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 79 (755)
.++++++ +|+ .+|. |..+++|+.|+|++ |.|++..+..|.+|++|++|+|++|+|++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4678887 787 4777 99999999999996 999877778899999999999999999888888899999999999999
Q ss_pred CCCCCCcchhhcCCCCCcEEEccCCCCC
Q 004413 80 APFTGKIPDFIGNWTKLKSLRFQGNSFQ 107 (755)
Q Consensus 80 n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 107 (755)
|+|++..+..|..+. |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 999866666666665 999999999887
No 387
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.06 E-value=4.3e-11 Score=125.04 Aligned_cols=89 Identities=24% Similarity=0.342 Sum_probs=59.4
Q ss_pred ccccchhhhhc-CCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 004413 569 HGYLAPEYAMR-GHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALR 647 (755)
Q Consensus 569 ~gy~aPE~~~~-~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 647 (755)
..|+|||.+.+ +.++.++|||||||+++||+| |+.. ..+.. +.... +..... .+.+ ..+......
T Consensus 194 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~--~~~~~---~~~~~-~~~~~~--~~~~---~~~~~~~~~ 259 (303)
T 1zy4_A 194 AMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST--GMERV---NILKK-LRSVSI--EFPP---DFDDNKMKV 259 (303)
T ss_dssp CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS--HHHHH---HHHHH-HHSTTC--CCCT---TCCTTTSHH
T ss_pred ccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC--chhHH---HHHHh-cccccc--ccCc---cccccchHH
Confidence 45999999875 479999999999999999998 4332 11111 11111 111110 1111 223333456
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 004413 648 VIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 648 ~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
+.+++..|++.+|.+|||+.|+++
T Consensus 260 ~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 260 EKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhcCcccCcCHHHHhC
Confidence 778999999999999999999985
No 388
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.05 E-value=5.1e-11 Score=130.75 Aligned_cols=82 Identities=13% Similarity=0.071 Sum_probs=60.8
Q ss_pred ccccchhhh----------hcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCC
Q 004413 569 HGYLAPEYA----------MRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLT 638 (755)
Q Consensus 569 ~gy~aPE~~----------~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 638 (755)
.+|||||++ ....++.|+|||||||++|||+||+.|+......+ ....++.. ..
T Consensus 271 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~---------------~~~~~~~~-~~ 334 (413)
T 3dzo_A 271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG---------------GSEWIFRS-CK 334 (413)
T ss_dssp TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS---------------CSGGGGSS-CC
T ss_pred CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh---------------hHHHHHhh-cc
Confidence 789999999 55668999999999999999999999987543211 01111110 01
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 004413 639 EFNDKEALRVIGVALLCTQASPMMRPPMSRVV 670 (755)
Q Consensus 639 ~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~ 670 (755)
.++ ..+.+++..|++.+|++||++.|++
T Consensus 335 ~~~----~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 335 NIP----QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CCC----HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred cCC----HHHHHHHHHHccCChhhCcCHHHHH
Confidence 222 4577889999999999999987775
No 389
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.00 E-value=6e-11 Score=131.01 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=30.1
Q ss_pred ccchhhh-hcCCCCccceeeeehheeehhhhCCcCC
Q 004413 571 YLAPEYA-MRGHLTEKADVFSFGVAALEIISGRANS 605 (755)
Q Consensus 571 y~aPE~~-~~~~~t~ksDVysfGvvllElltg~~p~ 605 (755)
|+|||.+ ....++.++||||+||+++||+||..|+
T Consensus 217 Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 217 YRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp TCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 9999986 5667999999999999999999865443
No 390
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.99 E-value=3.1e-10 Score=125.27 Aligned_cols=94 Identities=20% Similarity=0.258 Sum_probs=66.3
Q ss_pred eccccccchhhhhc-------CCCCccceeeeehheeehhhh-CCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC
Q 004413 566 SNFHGYLAPEYAMR-------GHLTEKADVFSFGVAALEIIS-GRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL 637 (755)
Q Consensus 566 ~df~gy~aPE~~~~-------~~~t~ksDVysfGvvllEllt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 637 (755)
.+..+|+|||++.+ ..++.++|||||||+++||+| |+.|+......+ ..+ . . +... .+.+
T Consensus 193 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~~i---~----~-~~~~---~~~~ 260 (434)
T 2rio_A 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-SNI---I----R-GIFS---LDEM 260 (434)
T ss_dssp --CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-HHH---H----H-TCCC---CCCC
T ss_pred CCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-HHH---h----c-CCCC---cccc
Confidence 44578999999975 679999999999999999999 999986543322 111 1 1 1100 0111
Q ss_pred CC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 638 TE-FNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 638 ~~-~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.. ........+.+++..|++.+|.+|||+.||++
T Consensus 261 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 261 KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 23445567889999999999999999999974
No 391
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=98.98 E-value=4.2e-11 Score=124.44 Aligned_cols=86 Identities=10% Similarity=0.115 Sum_probs=57.5
Q ss_pred CCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCC---CCCCHHHHHHHHHHHHHhcc
Q 004413 581 HLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTL---TEFNDKEALRVIGVALLCTQ 657 (755)
Q Consensus 581 ~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l---~~~~~~~~~~~~~l~~~C~~ 657 (755)
.++.++|||||||++|||+||+.|+......+.. . .....+.... ..........+.+++..|++
T Consensus 178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 245 (286)
T 3uqc_A 178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL----------A--PAERDTAGQPIEPADIDRDIPFQISAVAARSVQ 245 (286)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS----------E--ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHC
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh----------H--HHHHHhccCCCChhhcccCCCHHHHHHHHHHcc
Confidence 3789999999999999999999998754321100 0 0000011100 01111223457889999999
Q ss_pred cCCCCCCCHHHHHHHHhccccc
Q 004413 658 ASPMMRPPMSRVVAMLAGDIEV 679 (755)
Q Consensus 658 ~~p~~RPsm~~v~~~L~~~~~~ 679 (755)
.+|++| |+.|+++.|+.....
T Consensus 246 ~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 246 GDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp TTSSCC-CHHHHHHHHHHHHC-
T ss_pred cCCccC-CHHHHHHHHHHHhcc
Confidence 999999 999999999986554
No 392
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=98.92 E-value=4e-10 Score=119.31 Aligned_cols=88 Identities=17% Similarity=0.270 Sum_probs=62.3
Q ss_pred ccccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 567 NFHGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 567 df~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
+..+|+|||.+.+..++.++|||||||+++||+||..|.. +..... .....+. ..........
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~----~~~~~~~--------~~~~~~~~~~ 300 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRII----TDVRNLK--------FPLLFTQKYP 300 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHH----HHHHTTC--------CCHHHHHHCH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHH----HHhhccC--------CCcccccCCh
Confidence 3478999999999999999999999999999999977631 111111 1111111 1111123334
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.+.+++..|++.+|.+||++.|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 5678999999999999999999975
No 393
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=2.3e-10 Score=122.30 Aligned_cols=136 Identities=20% Similarity=0.197 Sum_probs=65.0
Q ss_pred hhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhc--CCCCCCEEEeeC--ccccCC-----C
Q 004413 88 DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVM--SLKNLTDLSLRN--ALITGS-----I 158 (755)
Q Consensus 88 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~--~l~~L~~L~L~~--n~l~~~-----~ 158 (755)
..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 34444555555555554211 1222 22 45555555555444332222232 456666666542 111111 1
Q ss_pred Cccc--cCCCCCCEEeCCCCCCCCCCccccc---CCCCCCEEEccCCcCCCC----CCc--ccCCCCCEEEeecCcCCC
Q 004413 159 PSGI--GELQNLQTLDLSFNNLTGQIPRTLF---NIGSLNYLFLGNNSLSGT----LPT--QKSENLQNIDLSYNHLSG 226 (755)
Q Consensus 159 p~~~--~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~----~p~--~~~~~L~~L~Ls~N~l~g 226 (755)
...+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.+.+. ++. ..+++|+.|+|++|.|+.
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 1111 2356677777766666543332332 356677777777766642 111 123667777777776653
No 394
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=98.88 E-value=2.5e-10 Score=122.04 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=64.7
Q ss_pred cccccchhhhhcC-CCCc-cceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCcccccc------CCCCC-
Q 004413 568 FHGYLAPEYAMRG-HLTE-KADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLV------DPTLT- 638 (755)
Q Consensus 568 f~gy~aPE~~~~~-~~t~-ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------d~~l~- 638 (755)
...|+|||.+... .++. ++||||||++++||+||+.|+....... .+.. .+..+....-. .+...
T Consensus 213 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~----~i~~~~~~~~~~~~~~~~~~~~~ 286 (348)
T 2pml_X 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV--ELFN----NIRTKNIEYPLDRNHFLYPLTNK 286 (348)
T ss_dssp CGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH--HHHH----HHTSCCCCCCCSSSSSTTTTCC-
T ss_pred CcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHH----HHhccCcCCccchhhhhcccccc
Confidence 3679999999877 6766 9999999999999999999987654311 1111 12222211000 00000
Q ss_pred ---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 004413 639 ---EFNDKEALRVIGVALLCTQASPMMRPPMSRVVA 671 (755)
Q Consensus 639 ---~~~~~~~~~~~~l~~~C~~~~p~~RPsm~~v~~ 671 (755)
.........+.+++..|++.+|.+||++.|+++
T Consensus 287 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 287 KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp -------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000122346778999999999999999999975
No 395
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.87 E-value=2.6e-10 Score=133.36 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=59.7
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEALRV 648 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 648 (755)
.+|||||++.++. +.++|||||||+++||++|..|+...... .+ ... .........+
T Consensus 241 ~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------------------~~-~~~--~~~~~~~~~l 297 (681)
T 2pzi_A 241 PGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-------------------GL-PED--DPVLKTYDSY 297 (681)
T ss_dssp TTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-------------------SC-CTT--CHHHHHCHHH
T ss_pred ccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-------------------cc-ccc--ccccccCHHH
Confidence 5799999987764 99999999999999999998886531100 00 000 0011223467
Q ss_pred HHHHHHhcccCCCCCCC-HHHHHHHHhcc
Q 004413 649 IGVALLCTQASPMMRPP-MSRVVAMLAGD 676 (755)
Q Consensus 649 ~~l~~~C~~~~p~~RPs-m~~v~~~L~~~ 676 (755)
.++...|++.+|.+||+ +.++...|.+.
T Consensus 298 ~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 298 GRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 78999999999999995 56666666553
No 396
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=1.4e-09 Score=116.18 Aligned_cols=179 Identities=17% Similarity=0.188 Sum_probs=107.7
Q ss_pred ccCCccCcEEEccccCC---------CCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCc
Q 004413 42 IGNLAKLEQLYLNSWGA---------GGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPS 112 (755)
Q Consensus 42 ~~~l~~L~~L~L~~n~l---------~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 112 (755)
+.++++|+.|.+..+.. .+.+...+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.++.....
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHH
Confidence 33456666666644322 1123445566777777777766311 2332 32 67777777777766533222
Q ss_pred ccc--CCCCCCeeecCCC--C-CCCCCh----hhh--cCCCCCCEEEeeCccccCCCCccc---cCCCCCCEEeCCCCCC
Q 004413 113 SLS--KLASLDSLRISDI--Y-NVSSSL----DFV--MSLKNLTDLSLRNALITGSIPSGI---GELQNLQTLDLSFNNL 178 (755)
Q Consensus 113 ~l~--~l~~L~~L~l~~n--~-~~~~~~----~~l--~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l 178 (755)
.+. .+++|+.|+|+.+ . ...... ..+ ..+++|+.|+|.+|.+.+..+..+ ..+++|+.|+|+.|.+
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 333 5777777777421 1 111111 122 257899999999998875433222 2478999999999999
Q ss_pred CCC----CcccccCCCCCCEEEccCCcCCCCCCcccCC-CCCEEEeecCc
Q 004413 179 TGQ----IPRTLFNIGSLNYLFLGNNSLSGTLPTQKSE-NLQNIDLSYNH 223 (755)
Q Consensus 179 ~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-~L~~L~Ls~N~ 223 (755)
.+. ++..+..+++|+.|+|++|.++...-..+.. -...+++++|+
T Consensus 292 ~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp BHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred ChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 864 3444456799999999999887432221112 13568898887
No 397
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.80 E-value=8.9e-10 Score=115.14 Aligned_cols=85 Identities=12% Similarity=0.126 Sum_probs=54.1
Q ss_pred cCCCCccceeeeehheeehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCH----HHHHHHHHHHHH
Q 004413 579 RGHLTEKADVFSFGVAALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFND----KEALRVIGVALL 654 (755)
Q Consensus 579 ~~~~t~ksDVysfGvvllElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~----~~~~~~~~l~~~ 654 (755)
...++.++|||||||+++||+||+.|+........ ... ....+.......+. .....+.+++..
T Consensus 172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 239 (299)
T 3m2w_A 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPG-MKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 239 (299)
T ss_dssp TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CC-SCCSSCTTCCSSCHHHHTTSCHHHHHHHHH
T ss_pred cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHH-HHHHHhhccccCCchhcccCCHHHHHHHHH
Confidence 35678899999999999999999999865322110 000 01111111011121 123467789999
Q ss_pred hcccCCCCCCCHHHHHH--HHhc
Q 004413 655 CTQASPMMRPPMSRVVA--MLAG 675 (755)
Q Consensus 655 C~~~~p~~RPsm~~v~~--~L~~ 675 (755)
|++.+|.+|||+.|+++ .+..
T Consensus 240 ~l~~dP~~Rps~~e~l~hp~~~~ 262 (299)
T 3m2w_A 240 LLKTEPTQRMTITEFMNHPWIMQ 262 (299)
T ss_dssp HTCSSTTTSCCHHHHHTSHHHHT
T ss_pred HcccChhhCCCHHHHhcChhhcc
Confidence 99999999999999986 4444
No 398
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=6.9e-08 Score=93.00 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=42.8
Q ss_pred hcCCCCCCEEEccCc-cCCCC----CcccccCCccCcEEEccccCCCCC----CchhhhcCCCCCEEEccCCCCCCC---
Q 004413 18 LGNLKELTVLSFGNN-NFSGT----LPPEIGNLAKLEQLYLNSWGAGGE----IPSTYAKLRNMQTLWASDAPFTGK--- 85 (755)
Q Consensus 18 l~~l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~--- 85 (755)
+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 444556666666665 55421 223344445555555555555432 122333445555555555555422
Q ss_pred -cchhhcCCCCCcEEEc--cCCCCC
Q 004413 86 -IPDFIGNWTKLKSLRF--QGNSFQ 107 (755)
Q Consensus 86 -~p~~~~~l~~L~~L~L--~~n~l~ 107 (755)
+...+...++|++|+| ++|.++
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHhCCCceEEEecCCCCCCC
Confidence 2333344444555555 444444
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.29 E-value=7e-06 Score=89.01 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=90.9
Q ss_pred hhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCC
Q 004413 16 RELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTK 95 (755)
Q Consensus 16 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 95 (755)
..|.++++|+.+.|.++... .....|.++.+|+.+.+..+ +.......|.++..|+.+.+..+... +.+.+....+
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 45677788888888655332 34556777788888877654 33333456677777777666554322 2222333345
Q ss_pred CcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChh---------------------hhcCCCCCCEEEeeCccc
Q 004413 96 LKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLD---------------------FVMSLKNLTDLSLRNALI 154 (755)
Q Consensus 96 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~---------------------~l~~l~~L~~L~L~~n~l 154 (755)
|+.+.+..+ ++......+..+..|+.+.+..+. ...... .+..+.+|+.+.+..+ +
T Consensus 232 l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~-~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i 308 (394)
T 4fs7_A 232 VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK-LRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-V 308 (394)
T ss_dssp CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT-CEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-C
T ss_pred CceEEECCC-ceecccccccccccceeEEcCCCc-ceeeccccccccccceeccCceeeccccccccccccccccccc-c
Confidence 555555432 121223344555566666554321 122222 3444555555555433 3
Q ss_pred cCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 004413 155 TGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNN 200 (755)
Q Consensus 155 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 200 (755)
+..-...|.++.+|+.++|..+ ++..-..+|.+|.+|+.+++..|
T Consensus 309 ~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 309 KFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 3233344555555555555432 43233345555555555555444
No 400
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.25 E-value=1.6e-07 Score=90.44 Aligned_cols=42 Identities=7% Similarity=0.049 Sum_probs=20.8
Q ss_pred hhcCCCCCEEEccCC-CCCCC----cchhhcCCCCCcEEEccCCCCC
Q 004413 66 YAKLRNMQTLWASDA-PFTGK----IPDFIGNWTKLKSLRFQGNSFQ 107 (755)
Q Consensus 66 ~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~n~l~ 107 (755)
+...++|++|+|++| .+... +...+...++|++|+|++|.+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 444555666666655 55421 2233344455555555555544
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.24 E-value=2.2e-07 Score=94.28 Aligned_cols=106 Identities=22% Similarity=0.174 Sum_probs=72.3
Q ss_pred hcCCCCCCE--EEccCccCC---CCCcccccCCccCcEEEccccCCCC--CCchhhhcCCCCCEEEccCCCCCCCcchhh
Q 004413 18 LGNLKELTV--LSFGNNNFS---GTLPPEIGNLAKLEQLYLNSWGAGG--EIPSTYAKLRNMQTLWASDAPFTGKIPDFI 90 (755)
Q Consensus 18 l~~l~~L~~--L~Ls~n~l~---~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 90 (755)
|...+.|+. ++++.|... ..++....++++|+.|+|++|.|++ .+|..+..+++|+.|+|++|++++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455554 566777432 1112222457888889998888877 4456777889999999999988854 233
Q ss_pred cCCC--CCcEEEccCCCCCCCCCc-------cccCCCCCCeeec
Q 004413 91 GNWT--KLKSLRFQGNSFQGPIPS-------SLSKLASLDSLRI 125 (755)
Q Consensus 91 ~~l~--~L~~L~L~~n~l~~~~p~-------~l~~l~~L~~L~l 125 (755)
..+. +|++|+|++|.+++.+|. .+..+++|+.|+-
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 3333 899999999998876652 3667888888864
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.22 E-value=1.6e-05 Score=86.21 Aligned_cols=88 Identities=14% Similarity=0.196 Sum_probs=56.6
Q ss_pred hhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCcc-c--CCC
Q 004413 137 FVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQ-K--SEN 213 (755)
Q Consensus 137 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~--~~~ 213 (755)
+|.++..|+.+.+..+... .....|.++.+|+.+.+. +.++.....+|.++.+|+.++|..+ ++ .+... + ..+
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCC
Confidence 5667788888888665433 445567788888888885 4455344557778888888888654 44 23332 2 267
Q ss_pred CCEEEeecCcCCCCCcc
Q 004413 214 LQNIDLSYNHLSGPFPS 230 (755)
Q Consensus 214 L~~L~Ls~N~l~g~ip~ 230 (755)
|+.+.|..+ ++ .|..
T Consensus 336 L~~i~ip~s-v~-~I~~ 350 (394)
T 4gt6_A 336 LERIAIPSS-VT-KIPE 350 (394)
T ss_dssp CCEEEECTT-CC-BCCG
T ss_pred CCEEEECcc-cC-EEhH
Confidence 888888544 44 3443
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.21 E-value=4.5e-08 Score=99.32 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=81.2
Q ss_pred EccCccCCCCCcc-cccCCccCcE--EEccccCCC---CCCchhhhcCCCCCEEEccCCCCCC--CcchhhcCCCCCcEE
Q 004413 28 SFGNNNFSGTLPP-EIGNLAKLEQ--LYLNSWGAG---GEIPSTYAKLRNMQTLWASDAPFTG--KIPDFIGNWTKLKSL 99 (755)
Q Consensus 28 ~Ls~n~l~~~~p~-~~~~l~~L~~--L~L~~n~l~---~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L 99 (755)
...+|..++.+.- .|...+.|+. ++++.|... ..++....++++|+.|+|++|++++ .++..+..+++|+.|
T Consensus 122 ~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L 201 (267)
T 3rw6_A 122 SKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKIL 201 (267)
T ss_dssp HHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEE
T ss_pred HhccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEE
Confidence 3444444433321 2445555665 666766432 1122223578999999999999997 556778899999999
Q ss_pred EccCCCCCCCCCccccCCC--CCCeeecCCCCCCCCCh-------hhhcCCCCCCEEE
Q 004413 100 RFQGNSFQGPIPSSLSKLA--SLDSLRISDIYNVSSSL-------DFVMSLKNLTDLS 148 (755)
Q Consensus 100 ~L~~n~l~~~~p~~l~~l~--~L~~L~l~~n~~~~~~~-------~~l~~l~~L~~L~ 148 (755)
+|++|+|++. ..+..+. +|++|+|.+|.+....+ ..+..+++|+.|+
T Consensus 202 ~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 202 NLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999854 3344444 99999999999875322 2567889998876
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.20 E-value=8.6e-06 Score=88.31 Aligned_cols=107 Identities=20% Similarity=0.251 Sum_probs=78.1
Q ss_pred cccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCC
Q 004413 113 SLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSL 192 (755)
Q Consensus 113 ~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 192 (755)
.|.++.+|+.+.+.+ ........++.++.+|+.+.+. +.++......|.++.+|+.++|..+ ++..-..+|.+|.+|
T Consensus 260 aF~~c~~L~~i~lp~-~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPD-SVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCT-TCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEeccc-ccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 466778899988865 3344555678888999999986 4455455667888999999999765 554555688899999
Q ss_pred CEEEccCCcCCCCCCccc---CCCCCEEEeecCcC
Q 004413 193 NYLFLGNNSLSGTLPTQK---SENLQNIDLSYNHL 224 (755)
Q Consensus 193 ~~L~Ls~N~l~~~~p~~~---~~~L~~L~Ls~N~l 224 (755)
+.+.+..+ ++ .+.... ..+|+.+++.+|..
T Consensus 337 ~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 337 ERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred CEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 99999655 55 344432 37899999988754
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.12 E-value=1.2e-05 Score=87.11 Aligned_cols=178 Identities=10% Similarity=0.026 Sum_probs=116.7
Q ss_pred chhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCC---------------------CCCchhhhcCCCCC
Q 004413 15 PRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAG---------------------GEIPSTYAKLRNMQ 73 (755)
Q Consensus 15 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~---------------------~~~p~~~~~l~~L~ 73 (755)
...|.++.+|+.+++..+ ++......|.++..|+.+.+..+... ......|..+.+|+
T Consensus 178 ~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~ 256 (394)
T 4fs7_A 178 NGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLE 256 (394)
T ss_dssp TTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCC
T ss_pred cccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECCCceecccccccccccce
Confidence 456778889999988776 44344556777777777766543321 11112334444555
Q ss_pred EEEccCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCcc
Q 004413 74 TLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNAL 153 (755)
Q Consensus 74 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 153 (755)
.+.+..+... .....|.++..|+.+.+..+.+. ...+..+.+|+.+.+.+ .+......+|.++.+|+.++|..+
T Consensus 257 ~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~- 330 (394)
T 4fs7_A 257 SISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD-SVKFIGEEAFESCTSLVSIDLPYL- 330 (394)
T ss_dssp EEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT-TCCEECTTTTTTCTTCCEECCCTT-
T ss_pred eEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccccc-ccceechhhhcCCCCCCEEEeCCc-
Confidence 5555443222 22334455555555555443322 23567788899888875 355566678999999999999754
Q ss_pred ccCCCCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 004413 154 ITGSIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNN 200 (755)
Q Consensus 154 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 200 (755)
++..-...|.+|.+|+.+++..| ++..-..+|.+|.+|+.+++..+
T Consensus 331 v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 331 VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 66455678999999999999877 66555678999999999998655
No 406
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.83 E-value=5.9e-06 Score=77.71 Aligned_cols=87 Identities=9% Similarity=0.033 Sum_probs=56.4
Q ss_pred ccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCC-CCCCcchhhcCC----CCCcEEEccCCC-CCCCCCccccCCCC
Q 004413 46 AKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAP-FTGKIPDFIGNW----TKLKSLRFQGNS-FQGPIPSSLSKLAS 119 (755)
Q Consensus 46 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l----~~L~~L~L~~n~-l~~~~p~~l~~l~~ 119 (755)
-+|+.|||++|.++..--..+..+++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777665544556677777777777774 554333445554 367888887763 66444445667788
Q ss_pred CCeeecCCCCCCC
Q 004413 120 LDSLRISDIYNVS 132 (755)
Q Consensus 120 L~~L~l~~n~~~~ 132 (755)
|++|++++|...+
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 8888888776444
No 407
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.82 E-value=6.8e-06 Score=77.28 Aligned_cols=82 Identities=12% Similarity=0.064 Sum_probs=37.6
Q ss_pred CCCEEEccCccCCCCCcccccCCccCcEEEccccC-CCCCCchhhhcC----CCCCEEEccCCC-CCCCcchhhcCCCCC
Q 004413 23 ELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWG-AGGEIPSTYAKL----RNMQTLWASDAP-FTGKIPDFIGNWTKL 96 (755)
Q Consensus 23 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l----~~L~~L~L~~n~-l~~~~p~~~~~l~~L 96 (755)
+|+.|||++|.++..--..+.++++|++|+|++|. +++..-..+..+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543333344455555555555553 332222223332 245555555543 443323334445555
Q ss_pred cEEEccCC
Q 004413 97 KSLRFQGN 104 (755)
Q Consensus 97 ~~L~L~~n 104 (755)
++|+|++|
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.57 E-value=0.00038 Score=74.67 Aligned_cols=186 Identities=12% Similarity=0.023 Sum_probs=132.9
Q ss_pred CcCCCchhhcCCCCCCEEEccCccCCC------------CCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEc
Q 004413 10 FSGSVPRELGNLKELTVLSFGNNNFSG------------TLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWA 77 (755)
Q Consensus 10 l~~~~p~~l~~l~~L~~L~Ls~n~l~~------------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 77 (755)
++..-...+..+.+|+.+.+..+.... .....+.....+..+.+..+. .......+..+.+|+.+.+
T Consensus 146 v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~ 224 (379)
T 4h09_A 146 VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITI 224 (379)
T ss_dssp CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEEC
T ss_pred eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeecccccccccceeee
Confidence 343445678888899988887654321 122334455666666654322 2233456778889999988
Q ss_pred cCCCCCCCcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCC
Q 004413 78 SDAPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGS 157 (755)
Q Consensus 78 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 157 (755)
..+ +.......|.++..|+.+.+..+ ++......|.++.+|+.+.+.. .+.......|.++.+|+.+.+.++.++..
T Consensus 225 ~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~I 301 (379)
T 4h09_A 225 TSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIETL 301 (379)
T ss_dssp CTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCCEE
T ss_pred ccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceecccccccccccccccccccccccee
Confidence 665 33334556788899999999776 5544456788899999999865 45556666889999999999998888866
Q ss_pred CCccccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 004413 158 IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNN 200 (755)
Q Consensus 158 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 200 (755)
-...|.+|.+|+.++|..+ ++..-..+|.+|.+|+.+.+..+
T Consensus 302 ~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 302 EPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred hhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 6778999999999999765 66455568889999999887544
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.51 E-value=0.00087 Score=71.84 Aligned_cols=197 Identities=12% Similarity=0.058 Sum_probs=134.8
Q ss_pred hhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEccccCCCC------------CCchhhhcCCCCCEEEccCCCCCC
Q 004413 17 ELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLNSWGAGG------------EIPSTYAKLRNMQTLWASDAPFTG 84 (755)
Q Consensus 17 ~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~------------~~p~~~~~l~~L~~L~L~~n~l~~ 84 (755)
.|.+. +|+.+.+..+ ++......|.++.+|+.+.+..+.... .....+.....+..+.+..+. ..
T Consensus 131 ~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 207 (379)
T 4h09_A 131 IFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KT 207 (379)
T ss_dssp TTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CE
T ss_pred ccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eE
Confidence 34443 6777777654 443456678888999988876544321 112234455566666655433 22
Q ss_pred CcchhhcCCCCCcEEEccCCCCCCCCCccccCCCCCCeeecCCCCCCCCChhhhcCCCCCCEEEeeCccccCCCCccccC
Q 004413 85 KIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLDSLRISDIYNVSSSLDFVMSLKNLTDLSLRNALITGSIPSGIGE 164 (755)
Q Consensus 85 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 164 (755)
.....+....+|+.+.+..+ +.......+..+..|+.+.+..+ +......++.++.+|+.+.+..+ +.......|..
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTT
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccc
Confidence 34456777889999998765 33344567888999999999764 55666678889999999999754 54455667899
Q ss_pred CCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCccc---CCCCCEEEeec
Q 004413 165 LQNLQTLDLSFNNLTGQIPRTLFNIGSLNYLFLGNNSLSGTLPTQK---SENLQNIDLSY 221 (755)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~~L~~L~Ls~ 221 (755)
+.+|+.+.+..+.++..-..+|.+|.+|+.+.|..+ ++ .+.... ..+|+.+.+..
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCT
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECC
Confidence 999999999999888656678999999999999755 54 333322 25777776543
No 410
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=97.04 E-value=0.00036 Score=73.48 Aligned_cols=89 Identities=6% Similarity=-0.075 Sum_probs=54.0
Q ss_pred cccccchhhhhcCCCCccceeeeehhe-eehhhhCCcCCCCCchhhHHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 004413 568 FHGYLAPEYAMRGHLTEKADVFSFGVA-ALEIISGRANSDNSLDMEKIYLLEWAWNLHENNQSLGLVDPTLTEFNDKEAL 646 (755)
Q Consensus 568 f~gy~aPE~~~~~~~t~ksDVysfGvv-llElltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 646 (755)
...|||||.+.+.. +.++||||+|++ ..++.+|..|+.. ...+.............. .............
T Consensus 240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~ 310 (336)
T 2vuw_A 240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDKMLKQMTFK---TKCNTPAMKQIKR 310 (336)
T ss_dssp CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHHHHHTCCCS---SCCCSHHHHHHHH
T ss_pred eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHhhhhhhccC---cccchhhhhhcCH
Confidence 36799999988655 999999998776 7889999988631 100011111111111000 0011112234566
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHH
Q 004413 647 RVIGVALLCTQASPMMRPPMSRVV 670 (755)
Q Consensus 647 ~~~~l~~~C~~~~p~~RPsm~~v~ 670 (755)
.+.++...|++.+ |+.|++
T Consensus 311 ~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 311 KIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHhccC-----CHHHHH
Confidence 7888999999865 888876
No 411
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.98 E-value=0.00026 Score=67.76 Aligned_cols=89 Identities=10% Similarity=0.129 Sum_probs=39.0
Q ss_pred hhcCCCCCEEEccCCCCCC----CcchhhcCCCCCcEEEccCCCCCCC----CCccccCCCCCCeeecCCCCC-CCC---
Q 004413 66 YAKLRNMQTLWASDAPFTG----KIPDFIGNWTKLKSLRFQGNSFQGP----IPSSLSKLASLDSLRISDIYN-VSS--- 133 (755)
Q Consensus 66 ~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~n~~-~~~--- 133 (755)
+..-..|+.|+|++|.+.. .+...+..-+.|++|+|++|.|+.. +...+..-+.|+.|+|++|.. ...
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 3334445555555554442 2223333344555555555555421 122333344555555553322 111
Q ss_pred ---ChhhhcCCCCCCEEEeeCccc
Q 004413 134 ---SLDFVMSLKNLTDLSLRNALI 154 (755)
Q Consensus 134 ---~~~~l~~l~~L~~L~L~~n~l 154 (755)
....+..-+.|+.|+++.|.+
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCc
Confidence 112344455666666665543
No 412
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.93 E-value=0.00061 Score=65.20 Aligned_cols=111 Identities=10% Similarity=0.187 Sum_probs=54.9
Q ss_pred cCCCCCEEEccCC-CCCC----CcchhhcCCCCCcEEEccCCCCCCC----CCccccCCCCCCeeecCCCCCCCCChh--
Q 004413 68 KLRNMQTLWASDA-PFTG----KIPDFIGNWTKLKSLRFQGNSFQGP----IPSSLSKLASLDSLRISDIYNVSSSLD-- 136 (755)
Q Consensus 68 ~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~n~~~~~~~~-- 136 (755)
+-+.|++|+|++| .+.. .+...+..-+.|+.|+|++|.+... +...+..-+.|++|+|++|.+......
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3455556666553 4432 1334444555666666666666522 222333445666666666665543322
Q ss_pred --hhcCCCCCCEEEeeCcc---ccCC----CCccccCCCCCCEEeCCCCCC
Q 004413 137 --FVMSLKNLTDLSLRNAL---ITGS----IPSGIGELQNLQTLDLSFNNL 178 (755)
Q Consensus 137 --~l~~l~~L~~L~L~~n~---l~~~----~p~~~~~l~~L~~L~Ls~N~l 178 (755)
.+..-+.|+.|+|++|. +... +...+..-+.|+.|+++.|.+
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 33444556666665432 2211 223344445666666665543
No 413
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.07 E-value=0.0079 Score=53.54 Aligned_cols=56 Identities=16% Similarity=0.293 Sum_probs=36.6
Q ss_pred EEEccCccCC-CCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccCCCCC
Q 004413 26 VLSFGNNNFS-GTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASDAPFT 83 (755)
Q Consensus 26 ~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 83 (755)
.++.+++.++ ..+|..+. .+|++|+|++|+|+...+..|..+++|+.|+|.+|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666676664 24554332 35777777777776655566777777777777777664
No 414
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.76 E-value=0.016 Score=51.49 Aligned_cols=56 Identities=13% Similarity=0.284 Sum_probs=29.9
Q ss_pred EEEccccCCC-CCCchhhhcCCCCCEEEccCCCCCCCcchhhcCCCCCcEEEccCCCCC
Q 004413 50 QLYLNSWGAG-GEIPSTYAKLRNMQTLWASDAPFTGKIPDFIGNWTKLKSLRFQGNSFQ 107 (755)
Q Consensus 50 ~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 107 (755)
.++.++++++ ..+|..+. .+|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555553 23443321 34666666666666444445555666666666666553
No 415
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=95.66 E-value=0.012 Score=55.34 Aligned_cols=99 Identities=27% Similarity=0.321 Sum_probs=75.8
Q ss_pred CChhhhcccccCCCCcceeeccccCCCceEEeeeeeeeeccCChhhhccccceEeEEEEcCeeecccccchhhcCCCCce
Q 004413 341 RTPELYQTSRISPGSLRYYGLGLENGPYNVSLLFAETNILDRSTERWESLARRVFDIYIQGTLRWKDFDISKEAGGPNRA 420 (755)
Q Consensus 341 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 420 (755)
.|.+++++++....++++...+..++.|.+.++|++... ...+.++|++++.|....++|++...+|+ ..+
T Consensus 52 ~~~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~--------~~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~ 122 (174)
T 2jwp_A 52 EDQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYF--------AQSQQKVFDVRVNGHTVVKDLDIFDRVGH-STA 122 (174)
T ss_dssp HHHHTTTCCCCCCSCEEEEEECCSCEEEEEEEEEECCSC--------CCSSSSCEEEEETTEEEEEEECHHHHHSS-SSC
T ss_pred CCchhhhhhccCCCCeEEEEEeCCCeEEEEEEEEecccc--------CCCCCeEeEEEECCEEeecCcCHHHhhCC-Cee
Confidence 467799999988888887766667899999999999764 12678899999999999999999988876 456
Q ss_pred EEEeeEeeecCCcceEEEEEc-CCccccc
Q 004413 421 IIKNFNATVSENHLEIHLFWA-GKGTCCV 448 (755)
Q Consensus 421 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~~ 448 (755)
+.+.|...+..+.+.++..+. ..+.+++
T Consensus 123 ~~~~~~~~v~~~~l~i~~~~~~~~g~L~I 151 (174)
T 2jwp_A 123 HDEIIPISIKKGKLSVQGEVSTFTGKLSV 151 (174)
T ss_dssp EEEEEEEEEETTEEEETTEEEECCSEEEE
T ss_pred EEEEEEEEEecCceeeeeeecccCCeEEE
Confidence 778888887777766654443 3344433
No 416
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=92.14 E-value=0.029 Score=63.44 Aligned_cols=35 Identities=11% Similarity=-0.110 Sum_probs=14.9
Q ss_pred ccccchhhhhcCCCCccceeeeehheeehhhhCCcC
Q 004413 569 HGYLAPEYAMRGHLTEKADVFSFGVAALEIISGRAN 604 (755)
Q Consensus 569 ~gy~aPE~~~~~~~t~ksDVysfGvvllElltg~~p 604 (755)
++|||||.+. +++..++|+||.|++++++.++..+
T Consensus 403 p~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 403 FFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHC------------------CCCCTTHHH
T ss_pred hhhccHHHhC-CCCCCcccccccccchhhhccccch
Confidence 6899999876 5678899999999999999887554
No 417
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.56 E-value=0.11 Score=35.76 Aligned_cols=29 Identities=28% Similarity=0.485 Sum_probs=17.4
Q ss_pred eeEEeehHHHHHHHHHHHHHHHhhhcccc
Q 004413 486 GLIVGIAVPLGILGLIAISIVFYMRRKKD 514 (755)
Q Consensus 486 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~ 514 (755)
.++.+++.+++++++++++.++|+|||+.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 45556666666666666555666666554
No 418
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.63 E-value=0.15 Score=35.11 Aligned_cols=29 Identities=28% Similarity=0.408 Sum_probs=16.4
Q ss_pred eeEEeehHHHHHHHHHHHHHHHhhhcccc
Q 004413 486 GLIVGIAVPLGILGLIAISIVFYMRRKKD 514 (755)
Q Consensus 486 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~ 514 (755)
.++.|++.++..+++++...++|+|||+.
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 45555555565555555555666666554
No 419
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.26 E-value=0.31 Score=33.46 Aligned_cols=28 Identities=11% Similarity=0.324 Sum_probs=14.3
Q ss_pred eEEeehHHHHHHHHHHHHHHHhhhcccc
Q 004413 487 LIVGIAVPLGILGLIAISIVFYMRRKKD 514 (755)
Q Consensus 487 ~~~~i~~~~~~l~~~~~~~~~~~~~~~~ 514 (755)
.+++.++++.++++++++.++|+|||+.
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred chHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 3455555544444444444555555543
No 420
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=72.45 E-value=1.6 Score=29.05 Aligned_cols=16 Identities=25% Similarity=0.183 Sum_probs=9.2
Q ss_pred ceeEEeehHHHHHHHH
Q 004413 485 TGLIVGIAVPLGILGL 500 (755)
Q Consensus 485 ~~~~~~i~~~~~~l~~ 500 (755)
.+.++|++++..+.++
T Consensus 10 ~GaIAGiVvG~v~gv~ 25 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred CCceeeeehHHHHHHH
Confidence 4566777776654333
No 421
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=71.88 E-value=0.54 Score=52.50 Aligned_cols=40 Identities=15% Similarity=0.006 Sum_probs=33.3
Q ss_pred ccccccchhhhhc--CCCCccceeeeehheeehhhhCCcCCC
Q 004413 567 NFHGYLAPEYAMR--GHLTEKADVFSFGVAALEIISGRANSD 606 (755)
Q Consensus 567 df~gy~aPE~~~~--~~~t~ksDVysfGvvllElltg~~p~~ 606 (755)
+++.|||||++.. ..|+.++|+||..+-.+|-+.+|.+|.
T Consensus 498 GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 498 STHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3478999999986 678899999999988888888887764
No 422
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=56.68 E-value=2.5 Score=28.60 Aligned_cols=10 Identities=40% Similarity=0.531 Sum_probs=3.9
Q ss_pred EEeehHHHHH
Q 004413 488 IVGIAVPLGI 497 (755)
Q Consensus 488 ~~~i~~~~~~ 497 (755)
+.+++.++.+
T Consensus 16 ~~~vv~Gv~l 25 (41)
T 2k9y_A 16 IGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3334444333
No 423
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=44.82 E-value=2.9 Score=43.33 Aligned_cols=31 Identities=16% Similarity=0.401 Sum_probs=25.8
Q ss_pred cCHHHHHHHhcCCCCCCcccCCCCcceeece
Q 004413 531 FSYAELRSATQDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 531 ~~~~el~~at~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
+...++....++|...++||+|+||.||++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~ 42 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEAD 42 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEE
Confidence 4456666677889888999999999999985
No 424
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=39.18 E-value=3.7 Score=43.80 Aligned_cols=23 Identities=13% Similarity=0.081 Sum_probs=18.8
Q ss_pred HhcCCCCCCcccCCCCcceeece
Q 004413 539 ATQDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 539 at~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
.+.+|...++||+|+||.||++.
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~ 98 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEAT 98 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEE
T ss_pred CceeEEEecccccCCCEEEEEEE
Confidence 34456667899999999999987
No 425
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=34.74 E-value=6.2 Score=40.06 Aligned_cols=22 Identities=36% Similarity=0.895 Sum_probs=17.5
Q ss_pred hcCCCCCCcccCCCCcceeece
Q 004413 540 TQDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 540 t~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
.++|...+.||+|+||.||++.
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~ 26 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAK 26 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEE
T ss_pred hhcCceeeEecCCCCeEEEEEE
Confidence 3567777899999999999986
No 426
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=32.40 E-value=5.4 Score=25.82 Aligned_cols=8 Identities=13% Similarity=0.559 Sum_probs=4.0
Q ss_pred HHHhhhcc
Q 004413 505 IVFYMRRK 512 (755)
Q Consensus 505 ~~~~~~~~ 512 (755)
..+|+|||
T Consensus 27 ~~~~iRRr 34 (35)
T 1iij_A 27 VGILIKRR 34 (35)
T ss_dssp TTHHHHHC
T ss_pred hheEEeec
Confidence 34455554
No 427
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.70 E-value=90 Score=25.45 Aligned_cols=39 Identities=13% Similarity=0.090 Sum_probs=18.3
Q ss_pred chhhcCCCCCCEEEccCccCCCCCcccccCCccCcEEEcc
Q 004413 15 PRELGNLKELTVLSFGNNNFSGTLPPEIGNLAKLEQLYLN 54 (755)
Q Consensus 15 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 54 (755)
...|.++++|+.+.|-.+ ++..-...|.+|.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344555555555555443 222233345555555555554
No 428
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=28.77 E-value=6.9 Score=40.11 Aligned_cols=21 Identities=29% Similarity=0.721 Sum_probs=17.6
Q ss_pred cCCCCCCcccCCCCcceeece
Q 004413 541 QDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 541 ~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
++|...++||+|+||.||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~ 40 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTI 40 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEE
T ss_pred ccchheeeecccCceEEEEEE
Confidence 445567899999999999986
No 429
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.56 E-value=98 Score=25.22 Aligned_cols=46 Identities=7% Similarity=0.056 Sum_probs=26.8
Q ss_pred cCCCCCcccccCCccCcEEEccccCCCCCCchhhhcCCCCCEEEccC
Q 004413 33 NFSGTLPPEIGNLAKLEQLYLNSWGAGGEIPSTYAKLRNMQTLWASD 79 (755)
Q Consensus 33 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 79 (755)
.++..-...|.+|.+|+.+.|-.+ ++..-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344344455667777777777542 3334445666667776666654
No 430
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=26.36 E-value=11 Score=38.66 Aligned_cols=22 Identities=27% Similarity=0.594 Sum_probs=18.8
Q ss_pred hcCCCCCCcccCCCCcceeece
Q 004413 540 TQDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 540 t~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
.++|...+.||+|+||.||++.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~ 65 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNAT 65 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEE
T ss_pred HHHceeeeeecCCCCceeEEee
Confidence 4567777899999999999986
No 431
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=26.26 E-value=15 Score=36.38 Aligned_cols=16 Identities=31% Similarity=0.663 Sum_probs=14.1
Q ss_pred CCcccCCCCcceeece
Q 004413 546 SNKLGEGGYGPVYKKT 561 (755)
Q Consensus 546 ~~~lg~g~fg~Vy~g~ 561 (755)
.++||+|+||.||++.
T Consensus 31 ~~~lg~G~~g~Vy~~~ 46 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGL 46 (290)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred eeeccCCCCeEEEEeE
Confidence 4579999999999986
No 432
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=24.63 E-value=13 Score=38.88 Aligned_cols=21 Identities=24% Similarity=0.370 Sum_probs=17.9
Q ss_pred cCCCCCCcccCCCCcceeece
Q 004413 541 QDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 541 ~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
++|...++||+|+||.||++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~ 57 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSW 57 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEE
Confidence 456667899999999999985
No 433
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=23.91 E-value=9.7 Score=39.79 Aligned_cols=22 Identities=14% Similarity=0.093 Sum_probs=18.2
Q ss_pred hcCCCCCCcccCCCCcceeece
Q 004413 540 TQDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 540 t~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
.++|...+.||+|+||.||++.
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~ 93 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEAT 93 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEE
T ss_pred CceEEEcceeecCCCEEEEEEE
Confidence 3556667899999999999986
No 434
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=23.10 E-value=17 Score=23.07 Aligned_cols=24 Identities=13% Similarity=0.246 Sum_probs=11.1
Q ss_pred EeehHHHHHHHHHHHHHHHhhhcc
Q 004413 489 VGIAVPLGILGLIAISIVFYMRRK 512 (755)
Q Consensus 489 ~~i~~~~~~l~~~~~~~~~~~~~~ 512 (755)
+.++++++++.+++...++|||-|
T Consensus 10 lt~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 10 LTVIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCceeEEEccc
Confidence 334444444444444445555544
No 435
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=22.68 E-value=12 Score=39.00 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=17.7
Q ss_pred cCCCCCCcccCCCCcceeece
Q 004413 541 QDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 541 ~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
.+|...++||+|+||.||++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~ 82 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVR 82 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEE
Confidence 346667899999999999986
No 436
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=22.31 E-value=18 Score=36.94 Aligned_cols=22 Identities=14% Similarity=0.297 Sum_probs=18.7
Q ss_pred hcCCCCCCcccCCCCcceeece
Q 004413 540 TQDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 540 t~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
.++|...+.||+|+||.||++.
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~ 51 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCE 51 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEE
T ss_pred cCceEEEEEEcCCCCeEEEEEE
Confidence 3567777899999999999985
No 437
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=22.00 E-value=15 Score=37.90 Aligned_cols=21 Identities=24% Similarity=0.370 Sum_probs=17.9
Q ss_pred cCCCCCCcccCCCCcceeece
Q 004413 541 QDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 541 ~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
++|...++||+|+||.||++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~ 39 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAK 39 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEE
Confidence 456667899999999999986
No 438
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=21.87 E-value=14 Score=37.71 Aligned_cols=24 Identities=17% Similarity=0.506 Sum_probs=20.0
Q ss_pred HHhcCCCCCCcccCCCCcceeece
Q 004413 538 SATQDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 538 ~at~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
...++|...+.||+|+||.||++.
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~ 62 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGK 62 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEE
T ss_pred cccccEEEEeeecCCCCcEEEEEE
Confidence 345677778899999999999986
No 439
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=21.71 E-value=12 Score=38.58 Aligned_cols=21 Identities=10% Similarity=0.215 Sum_probs=17.9
Q ss_pred cCCCCCCcccCCCCcceeece
Q 004413 541 QDFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 541 ~~f~~~~~lg~g~fg~Vy~g~ 561 (755)
++|...+.||+|+||.||++.
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~ 62 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAA 62 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEE
T ss_pred CeEEEEEEecCCCCeEEEEEe
Confidence 456667899999999999985
No 440
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=21.14 E-value=25 Score=35.04 Aligned_cols=20 Identities=20% Similarity=0.167 Sum_probs=16.2
Q ss_pred CCCCCCcccCCCCcceeece
Q 004413 542 DFDPSNKLGEGGYGPVYKKT 561 (755)
Q Consensus 542 ~f~~~~~lg~g~fg~Vy~g~ 561 (755)
-|...+.||+|+||.||++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~ 110 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCY 110 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEE
T ss_pred EEEecCEeccCCCceEEEEE
Confidence 34445799999999999986
No 441
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=25.79 E-value=21 Score=24.05 Aligned_cols=26 Identities=15% Similarity=0.428 Sum_probs=11.7
Q ss_pred eeEEeehHHHHHHHHHHHHHHHhhhc
Q 004413 486 GLIVGIAVPLGILGLIAISIVFYMRR 511 (755)
Q Consensus 486 ~~~~~i~~~~~~l~~~~~~~~~~~~~ 511 (755)
...+|+.++.+.+..++++.+++.||
T Consensus 17 ga~iGL~v~gVai~~vIVvsl~mlRr 42 (43)
T 2llm_A 17 GAIIGLMVGGVVIATVIVITLVMLKK 42 (43)
Confidence 44555554444443344444444443
Done!